2019 167 Moesm1 Esm
2019 167 Moesm1 Esm
2019 167 Moesm1 Esm
Shuai Chen1*, Junfeng Gao1,2,*, Bharathi M Srinivasan1, Gang Zhang1, Viacheslav Sorkin1,
SUPPLEMENTARY METHODS
KMC Algorithms
At each given state i, kMC model specifies all the possible states j that it may transit into at the
next step based on these defined events. The transition rate is calculated by the transition state
theory (TST)1:
𝐸
𝑟𝑖→𝑗 = 𝜈 exp(− 𝑘𝑖→𝑗 ) (S1)
𝑇 𝑏
𝜈 is the order of the frequency of atomic vibration (1012-1013 s-1)2. In our simulations, 𝜈 is
selected as 1012 s-1, 𝐸𝑖→𝑗 is the energy barrier for the transition from current state i to another
*
Both authors contributed equally.
†
Corresponding author. Email: [email protected]
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state j, 𝑘𝑏 is the Boltzmann constant, and 𝑇 is the temperature. The sum of all the rates
corresponds to the total rate of leaving the current state, that is:
To determine which state j is to be selected for the transition from state i, a random number
U1 in the range (0, 1) is generated. The state j that satisfies the following condition is chosen.
∑𝑗−1 𝑗
𝑘=1 𝑟𝑖→𝑘 < 𝑈1 × 𝑅𝑖 < ∑𝑘=1 𝑟𝑖→𝑘 (S3)
1
△ 𝑡 = − (𝑅 ) ln 𝑈2 (S4)
𝑖
In the simulations, the key events for growth kinetics and their corresponding energy barriers are
defined and shown in Figure S1, such as the surface diffusion of W/Se (Event 1/2), attachment of
W/Se to the edge (Event 3/4), attachment of W/Se to form a kink (Event 5/6), edge diffusion of
W/Se (Event 7/8), deposition of W/Se to the substrate surface (Event 9/10), deposition of W/Se
to a zigzag edge (Event 11/12), and deposition of W/Se to form a kink (Event 13/14).
The energy barriers for the events are set based on Gao et al.’s DFT calculations3. Gao et al.
reported that the highest energy barrier for the diffusion of Se adatom on Au (111) surface was
calculated to be 0.36 eV. Therefore, the energy barriers for surface diffusion (Event 1/2) are 0.36
eV, including the forward and reverse processes for each event. Gao et al. also calculated the
attachment of a W2 dimer to the zigzag edge and found that the two energy barriers were 0.55
and 0.54 eV for each W atom, and the energy barrier for the detachment was 2.5 eV. Based on
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this calculation, the energy barriers for attachment to the zigzag edge (Event 3/4) are 0.55 eV for
the forward attachment and 2.5 eV for the reverse detachment. Meanwhile, Gao et al. found that
the attachment of a Se atom to form a kink was an exothermic reaction with a small energy
barrier of 0.32 eV. In this case, the energy barriers for attachment to form a kink (Event 5/6) are
0.32 eV for the forward attachment and 2.5 eV for the reverse detachment.
Supplementary Figure 1. Events and energetics in the kMC simulation model. Light blue and yellow
colored bonds represent the lattices. Purple and orange spheres represent the W and Se, respectively.
We also carried out first-principles calculations on the events that are critical to our proposed
ultrafast growth mechanism, that is, the attachment to zigzag edge contributing to the kink
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nucleation and the surface diffusion determining the kink propagation. The minimum energy
path for the attachment of a W dimer to the zigzag edge of a WSe2 cluster on Au (111) surface is
plotted in Figure S2a, and the schematic structures corresponding to the different states are
shown in Figure S2c. The results indicate that the energy barrier is 0.56 eV, which is quite close
to Gao et al.’s10 calculated value (0.55 eV). This low energy barrier for edge attachment results
in the fast kink nucleation. The minimum energy path for the diffusion of a Se adatom on Au
(111) surface is also plotted in Figure S2b, and the schematic structures corresponding to the
different states are shown in Figure S2d. The results demonstrate that the energy barrier is 0.25
eV, which also matches with Gao et al.’s10 calculation (Gao et al.10 reported that the highest
energy barrier for surface diffusion is 0.36 eV). This lower energy barrier (in comparison with
the edge attachment) causes the ultrafast surface diffusion, which is able to assist the attachment
of adatoms to diffuse to the most energetically favorable sites, leading to the ultrafast kink
propagation.
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Supplementary Figure 2. First-principles calculations on the minimum energy path for (a) the
attachment of a W dimer to the zigzag edge of a WSe2 cluster on Au (111) surface and (b) the diffusion of
a Se adatom on Au (111) surface. (c, d) The schematic structures corresponding to the different states in
(a, b), respectively. IS: initial state; LS: local state; TS: transition state; and FS: final state. Purple, orange
To the authors’ knowledge, there is no calculation for the energy barriers of the edge diffusion
of W/Se on Au(111) substrate (Event 7/8). In our study, initially, it is chosen to be 0.5 eV, which
is able to produce a compact triangular domain shape. We then increase it to 1.0 eV and 1.5 eV
to study the growth from the thermodynamic regime to the kinetic regime. To obtain accurate
energy barrier for edge diffusion, we perform our DFT calculations (see S1.3).
The surface depositions of W atom and Se dimer (Event 9/10) are controlled by the deposition
fluxes of FW and FS. In our kMC simulations, the values of FW and FS vary from 3×10-5 to 2×10-2
ML/s, which are comparable with the experimental growth rate. In Section 3.1, only surface
deposition is considered to study the growth from the thermodynamic regime to the kinetic
regime. In Section 3.2, the edge deposition from the vapor is also included and the edge
deposition is energetically more favorable than substrate surface deposition. The differences in
their deposition fluxes are determined by the energy barriers for attachments. The energy barriers
for attachment to a zigzag edge (Event 3/4) are 0.55 eV. Therefore, the deposition fluxes for
Event 9/10 and Event 11/12 are F and F×exp(0.55/kbT). The energy barriers for attachment to
form a kink are (Event 5/6) 0.32 eV. Therefore, the deposition fluxes for Event 11/12 and Event
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The energies of W atom with different in-plane (cf. Figure S3a) and out-of-plane (cf. Figure S3b)
distributions at the domain edge are calculated (cf. Figure S3c). Figure S3a shows 6 different in-
plane distributions of W atom resulting from the lattice mismatch between WSe2 and Au. Figure
S3b shows 2 different out-of-plane distributions of W. Figure S3c plots the energies of W atoms
with type I and type II out-of-plane distributions located at the 6 different in-plane positions. It
shows that W atoms of type I are the same as or more stable than those of type II. Furthermore, it
indicates that the diffusion of W atom from site 1 to site 2 or site 5 to 6 should be easier than that
from site 2 to site 3, site 3 to site 4, and site 4 to site 5 because of the lower energies of site 1 and
site 6. Therefore, the diffusions of W atom from site 2 to site 3, site 3 to site 4 and site 4 to site 5
with type I out-of-plane distribution are further calculated to obtain the largest energy barriers for
the edge diffusion (cf. Figure 2f). The results show that the energy barriers for the edge diffusion
of W along Se terminated zigzag edge are ~1.4 eV. First-principles calculations on the energy
barrier for Se atom diffusion along the W-terminated zigzag edge were also performed. We
found that the W-terminated zigzag edge underwent reconstruction (cf. Figure S3d), exhibiting
substantial inward displacements of all the first-row W atoms and outward displacements of half
of the second-row Se atoms. The minimum energy path for the diffusion of a Se atom along the
reconstructed W-terminated zigzag edge is plotted in Figure S3e, and the schematic structures
corresponding to the different states are shown in Figure S3f. Our calculations show that the
forward (from IS to FS in Figure S3f) diffusion barrier is 1.08 eV, while the backward one (from
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Supplementary Figure 3. (a) In-plane and (b) out-of-plane distributions of W at the Se zigzag edge. (c)
Energies of W at the Se zigzag edge with W different distributions. (d) In-plane and out-of-plane
structures of W-terminated zigzag edge. (e) The minimum energy path for the diffusion of a Se atom
along the reconstructed W-terminated zigzag edge. (f) The schematic structures corresponding to the
different states. IS: initial state; TS: transition state; LS: local state; and FS: final state. Purple, orange and
SUPPLEMENTARY MOVIES
Supplementary Movie 1 showing the evolution of WSe2 domain with edge diffusion barrier of
0.5 eV.
Supplementary Movie 2 showing the evolution of WSe2 domain with edge diffusion barrier of
1.0 eV.
Supplementary Movie 3 showing the evolution of WSe2 domain with edge diffusion barrier of
1.5 eV.
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Supplementary Movie 4 showing the evolution of WSe2 domain with the same W and Se fluxes.
Supplementary Movie 5 showing the evolution of WSe2 domain with W flux being smaller than
Se flux.
Supplementary Movie 6 showing the evolution of WSe2 domain with W flux being higher than
Se flux.
SUPPLEMENTARY REFERENCES
[1] Nitzan, A. Chemical Dynamics in Condensed Phases: Relaxation, Transfer and Reactions in
[2] Voter, A. F. Introduction to the Kinetic Monte Carlo Method. Radiation Effects in Solids 235,
1–23 (2007).
[3] Gao, Y.; Hong, Y. L.; Yin, L. C.; Wu, Z.; Yang, Z. et al. Ultrafast Growth of High-Quality