American Mineralogist, Volume 89, pages 1411–1421, 2004
Hydroxyl ordering in igneous apatite
R. CHRIS TACKER*
North Carolina State Museum of Natural Sciences, 11 West Jones Street, Raleigh, North Carolina 27601-1029, U.S.A.
ABSTRACT
Apatites from several pegmatites and two alkaline igneous environments were analyzed by electron
microprobe and by micro-FTIR spectroscopy in the region 3000–4000 cm–1. Hydrogen bonding between OH and adjacent halogens shifts the OH-stretching modes and proves sensitive to the ordering
of anions and cations within the apatite structure. With few exceptions, the spectrum of the stretching
vibration can be modeled as a combination of peaks observed in synthetic apatites.
Relative concentrations of OH populations can be determined from unpolarized spectra of oriented
specimens. Analysis of populations of OH-Cl and OH-F pairs shows that OH-Cl pairs occur at a frequency greater than expected from a random sequence. This finding confirms earlier results that Cl
incorporation into the hexagonal fluorapatite structure requires a hydroxyl nearest neighbor.
Additional component bands suggest cationic ordering into the Ca2 site. Comparison of random
mixing models with spectroscopic data suggests that Mn preferentially orders with OH. Limited data
for the Kola apatite suggest the same for Sr and REE, in accord with previous results on the influence
of OH on REE uptake. The small change in bond valence sum produced by substitution of an OH
may explain the pairing of OH and Sr, but not with Mn.
Activity of HAp in apatite is proportional to the area of the peak at 3575 cm–1. Activity calculated
from mole fraction of HAp in the normalized microprobe analysis may overestimate the activity of
water in associated exchange equilibria. Ordering of Cl-OH-F sequences produces potential complications for thermodynamic models.
INTRODUCTION
The apatite mineral group is a valuable petrogenetic indicator of volatile behavior in igneous and metamorphic rocks. The
geochemistry of the solid-solution series [(Ca5(PO4)3(F, OH, Cl)]
can be linked to the thermodynamic fugacities or activities of F-,
OH- and Cl-complexes through a variety of exchange equilibria
(e.g., Tacker and Stormer 1991). However, thermodynamic models of apatite are limited by the understanding of atomic-scale
mixing of the end-members. Order-disorder phenomena will affect the thermodynamic activities of end-member apatite phase
components. Practical application of the models to petrogenetic
problems is likewise limited by the difficulties with electron
microprobe analysis (Stormer et al. 1993), and the associated
lack of measurement of the OH concentrations.
End-member fluorapatite (FAp) is hexagonal with the space
group P63/m. Along the sixfold c-axis, F atoms lie at the center
of triangles of Ca2 atoms. The F atoms and the Ca2 triangles lie
on the mirror plane at z = 1/4 and z = 3/4, although Fleet et al.
(2000a, 2000b) noted that the F atoms can be displaced slightly
from the special position. Pure end-member chlorapatite (ClAp)
and hydroxylapatite (HAp) are monoclinic (space group P21/c,
first setting). Chlorine and OH are ordered above or below the
Ca2 triangle. In both space groups, the halogens and OH may
be considered as a one-dimensional sequence along c (Hughes
et al. 1989).
* E-mail:
[email protected]
0003-004X/04/0010–1411$05.00
X-ray structural refinements of ternary apatites show two
possible ordering sequences for OH and Cl in mixed apatites
(Hughes et al. 1990). When Cl and OH are ordered into crystallographically equivalent sites above or below the plane of Ca2
triangles, the monoclinic structure is preserved. In hexagonal
structural sequences, the OH and Cl lie in close proximity between two adjacent Ca2 triangles. It is this hexagonal sequence
that allows accommodation of a large Cl atom in a fluorapatite
(Hughes et al. 1990). This proximity allows hydrogen bonding
between Cl and OH, which will be apparent in the infrared signal
of these apatites.
The stretching mode of OH in hydroxylapatite is found at
3575 cm–1 (Fowler 1974). This peak, or mean wavenumber, will
be referred to as OHOH. Hydrogen bonding with an adjacent Cl
shifts this band to 3494 cm–1 (Dykes and Elliott 1971; Maiti
and Freund 1981), referred to as OHCl. Hydrogen bonding with
a nearest-neighbor F shifts the absorbance to 3535–3540 cm–1,
referred to as OHF (R.A. Young et al. 1969; Levitt and Condrate
1970; Freund and Knobel 1977; Baumer et al. 1985). Hence there
are three possible populations of hydroxyls in apatites that can
be discerned with FTIR: OHOH, OHCl, and OHF. The position of
the stretching mode also varies with cation substitutions on Ca2
(Engel and Klee 1972; Fowler 1974).
The objective of the present work was to analyze the OHstretching region in well-crystallized apatites to identify anionic
ordering. The apatite mineral group also shows extensive cationic
substitution. A second objective was to characterize effects of
these substitutions on the OH-stretching signal.
1411
1412
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
METHODS
Sample preparation and analysis
FTIR of igneous apatites from a variety of environments was undertaken to
determine the nature of the hydroxyl signal. Apatites from a variety of pegmatites
were procured from the Harvard Mineralogical Museum and from David London,
University of Oklahoma. The pegmatites were the Bennett pegmatite mine, Oxford
County, Maine (Wise et al. 1994; Wise and Rose 2000); the Harding pegmatite,
Taos County, New Mexico (Chakoumakos and Lumpkin 1990); Strickland-Cramer
pegmatite, Portland, Connecticut; Midnight Owl pegmatite, White Picacho District,
Arizona (London and Burt 1982); the Black Mountain pegmatite, Rumford, Maine
(Brown and Wise 2001); and the Pulsifer quarry, Androscoggin County, Maine
(King and Foord 1994; Harvard Mineralogical Museum number 122454). Two
apatites from alkaline sources were examined, a Sr-rich apatite from the Kola
Peninsula (USNM no. 136827; Wolf and London 1995; Rakovan and Hughes 2000),
and one from the Dwyer Mine, Wilberforce, Ontario. Durango fluorapatite (E.J.
Young et al. 1969) came from the personal collection of the author.
Single crystals were mounted in Crystalbond, cut parallel to (100), and doubly
polished. An exception was the apatite from the Midnight Owl mine, a microcrystalline mass that could not be oriented crystallographically. It was included because
preliminary data indicated higher Mn concentrations. Crystalbond was dissolved
in acetone, and a slight residue removed manually with a Kimwipe and propanol.
Thickness of the finished sections was between 0.07 and 0.2 mm, measured on a
Mitutoyo digital micrometer to ±0.001 mm.
Finished samples were examined under the petrographic microscope, found
to be within a few degrees of [001], and then mapped. Most samples were single
phases (some of gem quality), with no intergrowths of other minerals. Fluid inclusions were present in some samples, but avoided during analysis. As a check for
homogeneity, apatites were given a rough polish and then examined under cathodoluminescence (CL), then ground and repolished to remove any area affected
by the electron beam (Stormer et al. 1993). No zonation of Mn, which imparts a
bright orange color in CL, was observed.
Electron microprobe analyses (EMPA) of several of the apatites were performed
at the University of Oklahoma (Table 1) by George B. Morgan III, on a Cameca
SX-50 instrument. Sections were oriented with the c-axis perpendicular to the beam
to avoid diffusion of F atoms documented by Stormer et al. (1993), and confirmed
by Ottolini et al. (2000). Standard conditions were 20 keV acceleration and a 20
μm spot. Major and minor elements (Mn, Fe, F, Cl, Na, P, and S) were analyzed
with a 10 nA beam to further avoid problems with light elements. Trace elements
(La, Ce, Nd, Sm, Si, Y, Sr, and Gd) were then analyzed with a 20 nA beam to
maximize count rates. Standards and sources used were Mn-rhodonite (USNM),
Fe-augite (Penn State), F-topaz (Utah), Cl-tugtupite (CCNM), Ca and Si-bytownite
(Stillwater), Na-albite (Amelia, VA), P-Durango fluorapatite, S-barite (C. Taylor),
Y-synthetic Y2SiO5, and Sr-strontiantite (USNM). The standard for La, Ce, Nd,
Sm, and Gd was a synthetic REE glass from the University of Oregon (Drake
and Weill 1972). Published analytical data for the Pulsifer apatite (Sudarsanan et
al. 1972; Dunn 1977) and Durango apatite (E.J. Young et al. 1969) were used in
calculations presented below (Table 1).
Analyses were normalized to a total charge of 25, assuming a full complement of 12.5 (O2– + Cl– + F–). This procedure yielded lower F and higher OH than
other methods of normalizing the analysis, but did not produce excess F. OH was
determined by difference XOH = 1– XF – XCl, where X is mole fraction.
Samples were analyzed on an Analect Micro-FTIR at the University of Tulsa,
with doubly polished (100) sections placed on top of manufactured KBr disks.
Typical analyses involved 514 scans. The resolution of the FTIR was 4 cm–1. If
a peak was present at a mean wavenumber more than a 2 σ error of 8 cm–1 away
from a recognized peak position, it was assumed to be new or unassigned. Each
mineral was analyzed at least 5 times with unpolarized radiation, although some
data were lost in transfer. Four oriented spectra of Durango FAp and Wilberforce
apatite were obtained with polarized radiation at the Department of Chemistry,
University of Tulsa, using a Nicolet 510P FT-IR. Acquisition of polarized spectra
with this instrument was not practical for most specimens due to the small size
and thinness of the sections.
The same areas of specimens were subjected to both electron microprobe
and FTIR analysis. A small uncertainty results in that the two techniques sample
different analytical volumes of the material: electron microprobe analysis is predominantly a shallow surface analysis while FTIR samples the entire thickness of
the specimen. The effects of differing analytical volumes are observed in apatites
from the Kola Peninsula and from the Black Mountain pegmatite, where small
OHCl peaks are observed, but no Cl is measured by EMPA. This feature may reflect
sample heterogeneity perpendicular to the c axis. It is also possible that the sample is
homogeneous, and Cl is below detection limits of EMPA (<0.006 wt%), but present
in amounts large enough to be detected as OHCl in the larger analytical volume of
FTIR. Preliminary data from Secondary Ion Mass Spectrometry (SIMS) of these
samples suggests that this may be the case (Tacker, unpublished data, 2003) for
the Kola, Pulsifer, and Black Mountain apatites.
Correction of spectra for polarization effects
Quantification of OH in a mineral requires use of polarized
infrared radiation (Libowitzky and Rossman 1996). Total absorbance (Atotal) is equal to the peak area Ai (cm–1) of an absorber
measured in orthogonal directions (Libowitzky and Rossman
1996) Atotal = Aa + Ab + Ac, where the subscripts refer to crystallographic axes. For hexagonal minerals, measurement of total
absorbance requires two measurements. If parallel to crystallographic axes: Atotal = Aa + Ac. For apatites, absorbance of
OH-stretching bands is zero when polarization is parallel to the
a-axis (Elliott 1965, 1994; Levitt and Condrate 1970). Maximum
absorbance is found parallel to the c-axis. This phenomenon was
confirmed for Durango and Wilberforce apatites in this study,
and is also observed for laser Raman spectroscopy of oriented
apatite sections (Tacker unpublished data). Hence, with polarization parallel to the c-axis: Atotal = Ac.
Data presented herein were obtained with unpolarized radiation. If crystallographically oriented sections are used, the
absorbance of OH in apatites represents a special case where a
“polarized” spectrum may be calculated from the unpolarized
data:
Ac = –log[(2 × 10–Aunpolarized) – 1]
(1)
The derivation of this equation is given in Appendix 1. The
effects of this recalculation are shown in Figure 1 for the apatite
from the Bennett pegmatite.
An interesting result is that this calculation places a limit on
the unpolarized spectrum of an absorber polarized parallel to c.
There cannot be a base ten log of zero or a negative number,
so
[(2 × 10–Aunpolarized) – 1] > 0 and Aunpolarized < 0.3010
This result is another aspect of the “plateau effect” observed
by Libowitzky and Rossman (1996) whereby unpolarized absorbance cannot be scaled linearly with thickness. Absorbance
will be approximately linear only at small thicknesses. As thickness of the specimen increases, unpolarized absorbance shows a
“plateau” that is insensitive to the concentration of the absorber.
For the apatites, unpolarized spectra with absorbances in excess
of 0.3010 cannot be used to determine Ac.
This limit also has immediate implications for interpreting
the spectra. Absorbances above this limit indicate the presence of
multiple absorbers polarized parallel to the c-axis, or the presence
of absorbers that have an additional component not polarized
parallel to c. The first instance was observed as multiple OH
moieties, with individual A < 0.3010, that combine to produce
a single signal with Aunpolarized > 0.3010. This was the case for 2
spectra from the Harding pegmatite. The second instance was
observed as broad absorbances contributing to background,
interpreted as probable interstitial water. In all other cases,
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
1413
FIGURE 1. Unpolarized spectrum from (100) section of Bennett
pegmatite apatite, recalculated according to Equation 1, to determine
Ac of the polarized spectrum.
Aunpolarized was below this limit, so the calculated Ac is linearly
scaled to with thickness.
Assignment of component bands in the OH-stretching
region
Peaks were modeled with the Voight function with a linear
background correction, using the PeakFit software (SPSS, Inc.).
The shape of the Voight function differs from the Gaussian primarily in the shape of the base, or tail, of the peak. Peakfitting
with the Gaussian shape resulted, in some cases, in small peaks
present at the basal edge of the larger peaks. For example,
Gaussian peak forms might yield small OHCl absorbances at the
base of the OHF, which were eliminated by the use of a Voight
function. In the end, identical results were obtained using a
Gaussian peak shape, primarily because the results rely on the
major observable peaks.
Peakfitting of spectra followed a specific routine, proceeding from simple model to more complex. Peaks were placed at
3535 cm–1 (OHF), 3575 cm–1 (OHOH), and 3494 cm–1 (OHCl), if
needed, and the model was then refined. Additional peaks were
observed in positions identical to those of the synthetic endmembers Sr5(PO4)3OH (Sr-OHOH), Sr5(PO4)3(OH,F) (Sr-OHF),
and Mn5(PO4)3OH (Mn-OHOH). Each spectrum was subjected to
peakfitting at least three times in different sessions to assess the
errors inherent in this procedure. Peak positions were reproducible to within ±2 cm–1 with this procedure. The standard deviation
of the averaged peak area is given as the error in Tables 2, 3,
and 4. Weak or poorly resolved peaks were not reproducible in
multiple peakfitting sessions, leading to larger standard errors.
In all specimens, the spectra could be resolved into different
components. The relative concentrations of the various hydrogenbonded OH groups was variable within each crystal, indicating
a heterogeneous distribution. Representative fitted spectra are
shown in Figures 2, 3, and 4.
Figure 2 shows the simplest spectra. Good results were obtained using Voight function peak forms in combination with
published peak positions, giving confidence in use of this method
for more complex spectra (Figs. 3–5). The 3535–3540 cm–1 absorbance of OHF is the principal peak seen in most spectra. It is
not surprising that the majority of OH groups in fluorapatite are
hydrogen bonded to F atoms. However, this single peak is insuf-
F IGURE 2. FTIR spectra of the OH-stretching region of (a)
Wilberforce, (b) Black Mountain, (c) Harding 23E, and (d) Durango
apatites. In addition to the prominent OHF component band, OHCl and
OHOH components can be resolved. Note that the Black Mountain
spectrum shows no Mn-OH components, even though the apatite contains
highest manganese measured by electron microprobe. All spectra are
“polarized,” recalculated according to Equation 1.
1414
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
TABLE 1. Electron microprobe analyses of apatite specimens
P2O5
SiO2
Y2O3
La2O3
Ce2O3
Sm2O3
Nd2O3
FeO
MnO
CaO
SrO
Na2O
SO3
F
Cl
Sum
O=F+Cl
Total
P
Si
Y
La
Ce
Sm
Nd
Fe
Mn
Ca
Sr
Na
S
F
Cl
OH
Black Mountain
wt%
1σ
41.94
0.39
0.01
0
0
0
0.03
0.01
0.03
0.02
0
0
0.01
0.01
0.5
0.03
5.18
0.14
49.5
0.44
0.01
0.01
0.01
0.01
0.01
0.01
3.55
0.1
0
0
100.78
1.49
99.29
2.914
0.001
0
0.001
0.001
0
0
0.034
0.36
4.352
0
0.002
0.001
0.921
0
0.079
0.0525
0
0
0
0
0
0
0.0002
0.0025
0.0304
0
0
0
0.007
0
0.007
Bennett
wt%
42.15
0.01
0
0.06
0.13
0
0.06
0.65
2.24
51.5
0.02
0.06
0.01
3.71
0.01
100.61
1.56
99.05
2.916
0.001
0
0.002
0.004
0
0.002
0.044
0.155
4.509
0.001
0.01
0.001
0.959
0.001
0.04
1σ
0.44
0
0
0.01
0.03
0.01
0.03
0.14
0.12
0.51
0.01
0.01
0.01
0.12
0.01
0.0604
0
0
0
0
0
0
0.0005
0.0012
0.036
0
0
0
0.008
0
0.008
Harding 2
wt%
1σ
41.87
0.32
0
0
0
0
0.02
0.02
0.01
0.02
0
0
0.01
0.01
0
0
3.51
0.15
51.85
0.79
0.02
0.01
0.02
0.01
0.02
0.01
3.57
0.04
0.01
0.01
100.91
1.51
99.4
Harding 23
wt%
1σ
41.89
0.39
0
0
0
0
0.03
0.02
0.03
0.02
0
0
0.01
0.01
0
0
3.56
0.36
51.55
0.82
0.03
0.01
0.02
0.01
0.01
0.01
3.6
0.06
0.01
0.01
100.74
1.52
99.22
Kola
wt%
39.01
0.17
0
1.75
2.43
0.13
0.46
0.01
0.03
43.12
8.86
0.78
0.1
3.36
0
100.21
1.41
98.8
Formula proportions based on 12.5 (O, C, F)
2.898
0.055
2.903
0.064
2.883
0
0
0
0
0.015
0
0
0
0
0
0.001
0
0.001
0
0.056
0
0
0.001
0
0.078
0
0
0
0
0.004
0
0
0
0
0.014
0
0
0
0
0.001
0.243
0.002
0.247
0.0029
0.002
4.542
0.037
4.521
0.0423
4.033
0.001
0
0.001
0
0.448
0.003
0
0.003
0
0.132
0.001
0
0.001
0
0.007
0.923
0.007
0.932
0.008
0.928
0.001
0
0.001
0
0
0.076
0.007
0.067
0.008
0.072
1σ
0.18
0.01
0
0.05
0.07
0
0.02
0.01
0.03
0.48
0.08
0.03
0.01
0.04
0
0.0347
0.0001
0
0.0004
0.0006
0
0.0001
0
0
0.0209
0.0021
0.0003
0
0.004
0
0.004
Midnight Owl
wt%
1σ
42.30
0.39
0.04
0.04
0
0
0.01
0.01
0.01
0.02
0
0
0.02
0.02
0.02
0.02
0.17
0.17
55.17
0.49
0.59
0.06
0.01
0.01
0.02
0.01
3.73
0.08
0
0.01
102.09
1.57
100.52
2.884
0.003
0
0
0
0
0.001
0.001
0.012
4.761
0.028
0.002
0.001
0.95
0
0.05
0.0514
0.0001
0
0
0
0
0
0
0.0004
0.0332
0.0002
0
0
0.007
0
0.007
Strickland-Cramer
wt%
1σ
41.89
0.36
0.01
0
0
0
0.06
0.02
0.01
0.02
0.01
0.01
0.03
0.02
0.25
0.05
3.28
0.1
51.28
0.5
0.01
0.01
0.07
0.01
0.03
0.02
3.55
0.08
0.01
0.01
100.49
1.5
98.99
2.908
0.001
0
0.002
0
0
0.001
0.017
0.228
4.506
0
0.011
0.002
0.921
0.001
0.078
0.0499
0
0
0
0
0
0
0.0001
0.0015
0.0305
0
0
0
0.006
0
0.006
Notes: Durango and Pulsifer from published data.
FIGURE 3. FTIR spectra with prominent bands at about 3550 cm–1.
(a) Tamil Nadu B, (b) Tamil Nadu C, and (c) Harding 2B. All spectra
are “polarized,” recalculated according to Equation 1.
ficient to describe the signal in the OH-stretching region.
Although Cl concentrations are low in all specimens, most
spectra (Fig. 2) show OHCl. The Wilberforce, Black Mountain,
and Harding 23 spectra show this peak as a shoulder. In the Durango apatite spectra, the peak is shifted from 3495 to 3482–3488
cm–1. It is not clear if the shift is due to substitution of a single
cation in the Ca2 triangle, or if two or more cations have been
replaced. The statistically more likely interpretation is the first,
which is preferred here. Because of the uncertainties in the assignment of this peak, the Durango results were not used in
later calculations.
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
1415
TABLE 1. —Continued
Tamilnadu
wt%
1σ
41.94
0.3
0.2
0.01
0.18
0.18
0.02
0.02
0.05
0.02
0
0
0.06
0.02
0.05
0.05
0.08
0.08
54.82
0.48
0.05
0.01
0.05
0.01
0.13
0.02
2.33
0.05
0.29
0.02
100.25
1.05
99.2
2.91
0.016
0.012
0.001
0.002
0
0.002
0.003
0.006
4.814
0.002
0.008
0.008
0.604
0.04
0.356
0.0431
0.0002
0.0005
0
0
0
0
0
0.0001
0.0285
0
0
0
0.004
0
0.004
Wilberforce
wt%
1σ
41.34
0.36
0.13
0
0
0
0.23
0.02
0.5
0.02
0.02
0.01
0.21
0.02
0.01
0.02
0.03
0.1
53.93
0.06
0.53
0.01
0.25
0.01
0.36
0.02
3.49
0.08
0.01
0.01
101.04
1.47
99.57
2.86
0.011
0
0.007
0.015
0.001
0.006
0.001
0.002
4.721
0.025
0.04
0.022
0.902
0.001
0.097
0.0414
0.0001
0
0.0001
0.0001
0
0.0001
0
0.0002
0.0261
0.0001
0.0001
0
0.005
0
0.005
Durango
Pulsifer
wt%
1σ
wt%
1σ
40.78
2.04
42.22
2.11
0.34
0.02
0
0
0.076
0
0
0.42
0.02
0
0
0.47
0.02
0
0
0.03
0
0
0
0.2
0.01
0
0
0
0
0
0
0.01
0
0.62
0.031
54.02
2.7
55.29
2.76
0.07
0
0.23
0.0115
0
0.37
0.02
0
3.53
0.18
3.55
0.18
0.41
0.02
0
0
101.05
101.68
1.58
1.49
99.47
100.19
2.826
0.028
0.005
0.013
0.014
0.001
0.006
0
0.001
4.737
0.003
0.036
0.023
0.914
0.057
0.029
0.482
0.002
0
0.001
0.001
0
0
0
0
0.25
0
0.001
0.002
0.033
0.002
0.033
2.887
0
0
0
0
0
0
0
0.042
4.786
0
0
0
0.907
0
0.093
0.488
0
0
0
0
0
0
0
0.002
0.251
0
0
0
0.033
0
0.033
Peakfitting revealed the presence of OHOH (3568–3577
cm–1). In Figures 3 and 4, all specimens show the presence of
OHOH except for the apatite from Bennett. Although these are
predominantly fluorapatites, there are still regions that resemble
end-member HAp. In Figure 5, the Kola apatite shows the presence of Sr-OHOH identical to the synthetic end-member (Engel
and Klee 1972; Fowler 1974).
The OH in the apatite structure is coordinated with three
Ca2. Replacement of a single Ca2 with another cation could
be expected to shift or broaden the position of the OH-stretching band. If two Ca2 are replaced, then the peak should shift
further; and if all three are replaced, the stretching band should
resemble that of the synthetic end-member. In these spectra, Srand Mn-apatites show absorbances akin to those of the synthetic
end-members.
Durango (Fig. 2), Tamil Nadu, and Harding 2E specimens
(Fig. 3) have a peak at 3550 cm–1 with three possible interpretations. First is that it represents Mn-OHOH (Mahapatra et al.
1990). Second, Engel and Klee (1972) found the 3550 cm–1
band to be present in synthetic Sr F-HAp, and assigned it to SrOHF. Strontium orders into the Ca2 site in apatite (Hughes et al.
1991a; Rakovan and Hughes 2000). Microprobe analysis (Table
1) shows that the Tamil Nadu apatites contain approximately
equivalent amounts of Sr and Mn, whereas Mn exceeds Sr in the
Harding 2E analysis. The peak at 3550 cm–1 cannot be assigned
conclusively in Durango or Tamil Nadu apatite, but is assigned
to Mn-OHOH in the Harding 2E.
FIGURE 4. FTIR spectra with prominent bands at about 3520 cm–1,
interpreted to be Mn-OHF. (a) Midnight Owl, (b) Pulsifer, (c) Bennett,
and (d) Strickland-Cramer. All spectra are “polarized,” recalculated
according to Equation 1, except for the Midnight Owl spectrum of an
unoriented microcrystalline mass of apatite.
1416
TABLE 2.
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
Comparison of concentration data (Eq. 3) derived from FTIR
results for OHCl and OHF, with probabilities derived from
electron microprobe data (Equation 4)
Bennet A
Bennet B
Bennet C
Bennet D
Black Mountain A
Black Mountain B
Harding 2A
Harding 2B
Harding 23A
Harding 23B
Harding 23C
Harding 23E
Kola A
Kola B
Pulsifer A
Pulsifer B
Pulsifer C
Pulsifer D
Strickland-Cramer A
Strickland-Cramer B
Strickland-Cramer C
Strickland-Cramer D
Strickland-Cramer E
Tamil Nadu A
Tamil Nadu B
Tamil Nadu C
Wilberforce A
Wilberforce B
Wilberforce C
Wilberforce D
Wilberforce polarized
TABLE 3.
OHCl/OHF
0.1141
0.1406
0.3444
0.0998
0.2697
0.2696
0.2096
0.3735
0.1200
0.3932
0.1520
0.5022
0.2069
0.2093
0.0511
0.0511
0.1097
0.0158
0.1611
0.1068
0.3343
0.0381
0.1573
0.1442
1.1068
no OHF
0.1158
0.1644
no OHCl
0.1203
0.3723
1σ
0.0326
0.0598
0.0394
0.0217
0.0461
0.1661
0.0918
0.2795
0.0332
0.3316
0.0649
0.4333
0.0118
0.2031
0.0069
0.0129
0.0168
0.0057
0.0702
0.0770
0.1584
0.0660
0.0575
0.1442
0.3435
0.0288
0.0394
0.0237
0.2516
XCl/XF
0.0014
0.0014
0.0014
0.0014
0.0000
0.0000
0.0015
0.0015
0.0015
0.0015
0.0015
0.0015
0.0000
0.0000
0.0000
0.0000
0.0000
0.0000
0.0015
0.0015
0.0015
0.0015
0.0015
0.0667
0.0667
0.0667
0.0015
0.0015
0.0015
0.0015
0.0015
1σ
0.00002 Ordered
0.00002 Ordered
0.00002 Ordered
0.00002 Ordered
0.00000 Ordered
0.00000 Ordered
0.00003 Ordered
0.00003 Ordered
0.00002 Ordered
0.00002 Ordered
0.00002 Ordered
0.00002 Ordered
0.00000 Ordered
0.00000 Ordered
0.00000 Ordered
0.00000 Ordered
0.00000 Ordered
0.00000 Ordered
0.00002 Ordered
0.00002 Ordered
0.00002 Ordered
0.00002 Disordered
0.00002 Ordered
0.00053 Disordered
0.00053 Ordered
0.00053
0.00001 Ordered
0.00001 Ordered
0.00001
0.00001 Ordered
0.00001 Ordered
Comparison of concentration data (Eq. 3), derived from FTIR
results for Mn-OHF and OHF, with probabilities derived from
electron microprobe data (Eq. 5)
Bennet A
Bennet B
Bennet C
Bennet D
Black Mountain A
Black Mountain B
Harding 2A
Harding 2B
Harding 23A
Harding 23B
Harding 23C
Harding 23E
Pulsifer A
Pulsifer B
Pulsifer C
Pulsifer D
Strickland-Cramer A
Strickland-Cramer B
Strickland-Cramer C
Strickland-Cramer D
Strickland-Cramer E
Mn-OHF/OHF
0.4723
0.5446
0.5805
0.5249
0.8689
0.4366
0.6227
0.5924
0.7071
2.4796
0.6413
0.8870
0.5926
0.5884
0.5926
0.3049
0.8778
0.7416
1.7905
0.7009
0.4243
1σ
0.2221
0.1355
0.1029
0.0969
0.6087
0.2285
0.2553
0.1361
0.1070
2.0017
0.2532
0.3917
0.0022
0.0460
0.0022
0.0315
0.2655
0.3207
0.9818
0.1249
0.1421
X3Mn /X3Ca
0.0012
0.0012
0.0012
0.0012
0.0178
0.0178
0.0050
0.0050
0.0053
0.0053
0.0053
0.0053
0.000023
0.000023
0.000023
0.000023
0.0041
0.0041
0.0041
0.0041
0.0041
1σ
0.00019
0.00019
0.00019
0.00019
0.00246
0.00246
0.00041
0.00041
0.00102
0.00102
0.00102
0.00102
0.00002
0.00002
0.00002
0.00002
0.00055
0.00055
0.00055
0.00055
0.00055
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
Ordered
The third possibility is that the 3550 cm–1 peak represents an
OH-F-HO configuration (Baumer et al. 1985), which is observed
in synthetic FAp-HAp mixtures at 3547 cm–1. This peak is observed in low-F specimens only, where the samples presented
here are high-F types. Baumer et al. (1985) did not use peakfitting methods to resolve the relative contributions of OHOH and
OHF. Their assignment is reinterpreted here as a combination of
OHF with the edges of the predominant OHOH peak, which acts
to shift the apparent maximum.
Figure 4 shows fitted spectra of Pulsifer and Midnight Owl
apatites, which have a small peak clearly present with a mean
wavenumber at 3520 cm–1 (3514–3520 cm–1). In the fitted spectra of apatites from the Black Mountain and Strickland-Cramer
pegmatites, a shoulder on the absorbance is present, resolved as
a prominent band from 3515–3520 cm–1. Microprobe analysis of
the pegmatite apatites indicates that they are high in Mn. Hughes
et al. (1991a) demonstrated that Mn atoms in apatites from the
Harding pegmatite enter both Ca1 and Ca2 sites. The substitution of the smaller Mn cation (Shannon 1976) in Ca2 produces
a shift of the OH-stretching mode to lower wavenumbers, from
3495 cm–1 in OHCl to 3380 cm–1 in Mn-OHCl (Engel and Klee
1972), and from 3575 cm–1 in OHOH to 3550 cm–1 in Mn-OHOH
(Mahapatra et al. 1990). Hence, this peak is attributed to a MnOHF configuration as compared to the Ca-OHF configuration at
3535 cm–1.
In the Kola Sr-apatite (Fig. 5), there are three peaks observed
in addition to those assigned to OHOH, OHF, and OHCl. The band
with a mean at 3591 cm–1 has been observed in Sr-HAp as the
stretching mode of OH groups (Sr-OHOH) (Engel and Klee 1972;
Fowler 1974). Two unassigned peaks are observed at 3468 and
3432 cm–1. In britholite, which is isostructural with apatite, there
is a broad band centered at 3434 cm–1 attributed to REE-OHF
(Oberti et al. 2001). The 3468 cm–1 peak observed here is tentatively assigned to REE-OHOH, given the preference of REE for
the Ca2 site in FAp and HAp (Hughes et al. 1991b; Fleet et al.
2000a, 2000b), and the influence of anion chemistry on the site
occupancies of REE (Fleet et al. 2000b).
In several spectra, broad absorptions were present that
were interpreted to be interstitial water. These may be water
in fluid inclusions too small to be observed by petrographic
microscope, because fluid inclusions were mapped and avoided
during analysis. Alternatively, these absorbances may represent
clusters of water molecules similar to those observed in quartz
(Kronenberg 1994).
The resolution of OHCl absorbances in apatites that are low
in both Cl and OH supports the conclusions that an OH group
might be required as an intermediate between F and a larger
Cl atom (Hughes et al. 1990). The presence of OH-stretching
bands identical to those observed in synthetic Mn- and Sr-apatites
TABLE 4. Results for Kola Sr-apatite
REE-OHF ± 1σ
X3REE ± 1σ
Sr-OHOH ± 1σ
X3Sr ± 1σ
/X3Ca
/OHOH
/X3Ca
/OHF
Kola A
0.0974 ±6.86x10-9 0.0014±0.00007
Ordered
no CaOHOH
Kola B
0.0738 ±0.008
0.0014±0.00007
Ordered
0.3807±0.0554
0.037±0.0018
Ordered
Kola C
0.0478 ±0.0065
0.0014±0.00007
Ordered
0.6553±0.2084
0.037±0.0018
Ordered
Kola D
0.142 ±0.1839
0.0014±0.00007
Disordered
0.287±0.3477
0.037±0.0018
Disordered
Kola E
0.1392 ±0.0141
0.0014±0.00007
Ordered
no CaOHOH
Note: Comparison of concentration data (Eq. 3), derived from FTIR results for Sr-OHOH and OH OH and for REE-OHF and OHF, with probabilities derived from electron
microprobe data (Eq. 5).
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
1417
beam by the spectrometer optics can affect the integrated absorbance (Libowitzky and Rossman 1996) and data are lacking
here to quantify those effects.
Comparing the integrated area of the OHCl peak to that of
the OHF yields:
A3494 cm –1
cOHCl
cOHF
=
A3535 cm –1
ε i( 3494 cm –1 )
(3)
ε i( 3535cm –1 )
Random ordering of anions and cations
F IGURE 5. Spectrum of Kola strontium-apatite, recalculated
according to Equation 1.
implies the existence of some degree of ordering between the
cations and anions. Relative concentrations of the OH populations and probabilities of configurations can be quantified to test
the hypotheses of ordering.
Relative quantification of OH populations
Determination of the relative concentrations of populations
of OHOH and OHCl and OHF pairs from the FTIR data is essential
for analysis of ordering. Libowitzky and Rossman (1996, 1997)
offer a methodology for quantifying OH (as H2O) in minerals, which requires measurement of the total intensity of the
integrated absorbance of the OH band at orthogonal directions
in a crystal, using polarized radiation. The calculations that follow utilize their derivations and conventions. Concentration is
determined from:
1.8
c = Ai ·
t·ρ·ε l
(2)
where c is the concentration of H2O (in wt%), Ai is integrated
absorbance of a peak (cm–1), t is thickness in cm, ρ is density
(gm/cm3), and εi is integrated molar absorption coefficient (L/
mol·cm2). In the simplest case, the area of the various absorbance
bands can be compared directly. This comparison is not possible for bands with differing mean wavenumbers, as it requires
knowledge of the integrated molar absorption coefficients (εi),
the values of which have not yet been determined explicitly for
the apatites.
However, the relationship between mean wavenumber and ει
has been determined for OH-O hydrogen bonding (Libowitzky
and Rossman 1997) as ει = 246.6(3753 – ν), where ν is mean
wavenumber of the OH-stretching band in cm–1. Values of εi were
calculated for the mean wavenumbers 3433, 3494, 3520, 3535,
3550, 3575, and 3592 cm–1. The applicability of this equation to
OH-F and OH-Cl pairs awaits further research, but represents the
best approximation currently available. The assumption that εi
values for all mean wavenumbers were approximately equal was
tested, yielding relative concentrations of the lower-wavenumber
moieties that were slightly and systematically higher. Use of this
assumption did not change the conclusions.
At this point it is essential to emphasize that the quantities
determined are the relative concentrations of OHOH, OHCl, and
OHF within each spectrum. Partial polarization of the infrared
Hughes et al. (1990) concluded that in the ternary apatites, an
OH might be required between Cl and F in order for the apatite
structure to accommodate the large Cl anion, which suggests
non-random anionic ordering. FTIR of the apatites give insight
into the ordering of hydroxyl anions in this sequence. For comparison, random ordering must be calculated, which is similar to
a configurational entropy calculation of random distribution of
atoms on sites within a crystal structure (Price 1985).
In a random, one-dimensional sequence along the sixfold
axis there are three anions, but two separate configurations
of hydroxyl groups: the hydrogen in the OH group is either
pointed toward or away from the neighbor under consideration.
For example, Cl-OH sequencing, in crystallographically similar
sites (Hughes et al. 1990) leads to monoclinic structure, but no
hydrogen bonding between the two. A Cl-HO sequence, on the
other hand, leads to hexagonal structure and hydrogen bonding.
For convenience, these two configurations of OH will be named
OHhb and OHnhb for hydrogen-bonded and non-hydrogen-bonded,
respectively. In analogous configurations, an F-OH sequence
shows no hydrogen bonding, whereas an F-HO sequence does.
When the two configurations of the hydroxyl ion in the random population are considered
XOHtotal = XOHhb + XOHnhb
where X is mole fraction, and the subscript i is the anion.
If XF + XCl + XOHtotal = 1, then
XF + XCl + XOHhb + XOHnhb = 1
Xi is also the probability, P, of finding an anion i on the
sixfold axis site (Price 1985), for an apatite formula written as
Ca12(Ca23(PO4)6(OH,F,Cl):
P(X1 = i) = Xi
The probability of finding Ca on the Ca2 sites is equal to
one for OHOH, OHCl, and OHF, and the probability of finding Ca
atoms on Ca1 and P atoms on the tetrahedral site are assumed
to be unity.
Along the hexad, there is one way for an OH group to point
out of two possible orientations, analogous to the problem of
flipping a coin. From the classical definition of probability
(Spiegel 1961),
P = 1/2 = 0.5
1418
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
Hence the probability
P(X1 = OHhb) = 0.5XOHtotal
The initial hypothesis is that each site is independent of the
others. The probability, P, of finding a hydrogen-bonded OH ion
on site X1, followed by an adjacent Cl on the site X2 is
P(X1 = OHhb, X2 = Cl) = P(X1 = OHhb)·P(X2 = Cl) = XOHhbXCl
and for F:
P(X1 = OHhb, X2 = F) = P(X1 = OHhb)· P(X2 = F) = XOHhbXF
As determined above, the relative concentrations of OHF and
OHCl are determined from FTIR data. These relative concentrations can be compared to the probabilities, which are
POHCl P ( X1 = OH hb , X2 = Cl) XOHhb XCl
=
=
=
POHF
P ( X1 = OH hb , X2 = F ) XOHhb XF
(4)
0.5 XOHtotal XCl XCl
=
0.5XOHtotal XF
XF
Comparison of these probabilities determined with Equation 4 with the FTIR data derived from Equation 3 is given in
Table 2.
The equations of Price (1985) may also be used to consider the
probability of cation-anion ordering. The probability of finding
three Mn atoms on the Ca2 site is given by
RESULTS
where Σni = sum of the component atoms i on the Ca2 site, from
the normalized analysis.
This sum will be equal to three by the formula chosen
Ca2
[Ca12Ca23(PO4)3(F,OH,Cl)], but the value of XCa
will vary depending on the way atoms are assigned to the Ca2 site. Previous
studies (Hughes et al. 1991a; Rakovan and Hughes 2000) found
that Sr partitions almost entirely into the Ca2 site, so all Sr will
be assigned to that site. Manganese atoms partition between the
Ca1 and Ca2 sites (Hughes et al. 1991a), but probability was
calculated by assigning all Mn to Ca2 to give a maximum value.
Calcium fills the remainder of the Ca2 site so that
3 – nMn – nSr
3
The ratio of the probability of finding Mn-OHF to that of
finding OHF is then
Ca2 3
P(Mn-OH)·P(Ca-F) (XMn
) ·X ·(X Ca2 )3 ·XF
= Ca2 3 OH Ca
Ca2 3
P(Ca-OH)·P(Ca-F) (XCa ) ·XOH ·(XCa
) ·XF
=
j
where ε is the error in the measurement and F is a function of
Xi (Shoemaker et al. 1974).
P(MnCa2) = (XMnCa2)3 where
n
n
Ca2
X Mn
= Mn = Mn and
Σni
3
Ca2
XCa
=
of probabilities for Mn-OHOH to that for OHOH. Results are given
in Tables 3 and 4. An implicit assumption in this calculation is
that all three Mn atoms occupy a single Ca2 triangle. The validity
of this assumption is supported by the similarities of the spectra
to end-member synthetic apatites.
Rare earth elements partition between Ca1 and Ca2, depending on a variety of factors including anion chemistry (Fleet et al.
2000b), but all were assigned to Ca2 in order to give the maximum probability of finding REE on that site. A similar calculation
was carried out comparing the ratio of probabilities of Sr-OHOH
to OHOH, and REE-OHOH to OHF vs. those observed with FTIR.
A similar calculation could be performed using the peak at 3550
cm–1, but given that the peak could represent contributions from
Mn-OHOH and Sr-OHF, this calculation was not attempted.
The probability ratios were compared with FTIR data at the
one sigma level. There should be 1:1 agreement for the two different numbers. A specimen was considered to be ordered if the
concentration ratio measured from FTIR, minus the one sigma
error was greater than the ratio of probabilities plus the one sigma
error. The initial assumption in calculating the probabilities is
that the sites are independent of each other. If the concentration
ratio and the probabilities are different, it indicates that the sites
are not independent, but are associated or ordered.
Error in the normalization and in all calculations was determined by:
2
∂F 2
ε 2 (F) = Σ
ε (Xi )
∂Xi X
i
(5)
Ca2 3
)
(XMn
Ca2 3
(XCa
)
Note that Equation 5 would yield the same result for the ratio
Comparison of the FTIR and electron microprobe data indicates that pairing of OH and Cl nearest neighbors takes place
at a frequency greater than expected from independent random
ordering of columnar anions (Table 2). In the cases where the
apatites are found to be disordered, it is usually due to relative
error in the FTIR measurement produced by a poorly resolved
OHCl peak.
Similar results are found in the comparison of FTIR and
microprobe data for Mn, Sr, and REE. FTIR results show that
the concentrations of these cation-hydroxyl pairs are much larger
than expected from random ordering. Again, apatites that do not
show ordering usually have larger standard errors in the measurements than those that show ordering. In the case of Mn-apatites,
there appears to be a clear association between Mn in the Ca2 site
and OH in the anion position. A similar association is observed
in the Kola apatite for Sr and REE. Although interesting, the Sr
and REE results are based on a single specimen and could reflect
other influences such as fluctuations in conditions of formation
or temperature.
DISCUSSION
Incorporation of a large Cl anion into the FAp structure in
synthetic apatites is accomplished by the movement of the F
away from mirror plane (Mackie and Young 1974). Fleet et al.
(2000a, 2000b) noted that the thermal parameter of F parallel to
the c-axis is larger than expected for thermal motion alone and
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
attributed this to movement out of the plane of the Ca2 triangle.
In contrast, Hughes et al. (1990) found that accommodation
in a natural apatite was produced by the presence of an OH
between the Cl and the F on the hexad. The difference between
the calculated probabilities and the concentrations determined
from FTIR demonstrates that an OH intermediate is necessary
for incorporation of Cl into a fluorapatite. In every case except
that of the Durango fluorapatite, the concentration of Cl is subordinate to that of OH.
The effects of the disordered, hexagonal OH-Cl sequence
have implications for thermodynamic models of the apatite
solid-solution series. In the ordered monoclinic form of the
hydroxyl-chlorapatite, local crystal structure is similar to that
seen in the end-members as described by Hughes et al. (1989).
This similarity may be interpreted as a case of thermodynamic
ideal mixing: the local structure of the mixed form is not significantly different from a mixture of the two end-members.
In the disordered hexagonal sequence, the Cl atom is pushed
nearer to the Ca2 triangle, which expands to accommodate the
larger anion, leading to tilting of adjacent polyhedra (Hughes et
al. 1990). Volume mismatch and lattice distortion gives rise to
non-ideal thermodynamic mixing terms (Davies and Navrotsky
1983; Ghiorso and Sack 1991). Hence, non-ideal mixing of the
ClAp and HAp end-members may be expected in hexagonal sequences, proportional to the concentration of OHCl. The hydrogen
bonding that results in OHCl can be expected to persist to at least
800 °C (Hitmi et al. 1988).
Furthermore, if hydroxyl intermediaries are required for
the incorporation of Cl atoms into fluorapatite, then the mixing of FAp and ClAp end-members is dependent on HAp. This
dependence indicates that thermodynamic models of the FApClAp-HAp solid solution may not be described adequately as
a combination of three binary solid solutions, but may require
ternary interaction parameters.
Thermodynamic models should account for the fact that the
activity of HAp in apatite, related to activity or fugacity of water
or hydroxyl in many exchange equilibria, is proportional only
to the mole fraction of OHOH. Thermodynamic models that do
not account for this may considerably overestimate the activity
of water in associated exchange equilibria.
Tacker and Stormer (1989) concluded that the available data
would permit that FAp-HAp solid solutions be treated as ideal
above 773 K. However, the available data were scant, and no
data are available on the relative populations of OHOH and OHF
in the run products. At 298 K, HAp-FAp solid solutions show
asymmetric and negative deviations from ideal mixing behavior
(Duff 1971) in Gibbs free energy, although not in molar volume
(Schaeken et al. 1975). Hydrogen bonding contributes to the
negative free energy of mixing, hence the persistence of the
hydrogen bonds at higher temperatures may be a key factor in understanding the energetics of mixing for these end-members.
The ordering of Mn and Sr between Ca1 and Ca2 in natural apatites has been explained by bond-valence calculations
(Hughes et al. 1991a): In the Ca1 site, Mn is less underbonded
than in Ca2, and Sr is less overbonded in Ca2 than in Ca1. Results
presented here indicate that the presence of OH influences the
occupancy of the Ca2 site by Mn. Manganese is found on the Ca2
site in excess of the random site occupation, even when all Mn
1419
is assigned to Ca2 to produce a maximum probability. In crystal-structure refinements, Hughes et al. (1991a) showed a slight
increase in Mn on the Ca2 site of the apatite with higher OH.
To test the effects of anion chemistry on Mn site occupancy
at Ca2, an O was substituted for a F and the bond valence sum
calculated using the methods of Brown (1981), in conjunction
with the interatomic distance data of Hughes et al. (1991a). This
substitution produced little change. Moving the OH farther from
the Ca2 produces a slight decrease in the bond valence sum,
when an increase is necessary to reduce the underbonding of
the Mn on that site.
The absence of Mn-OH bands from the Black Mountain
apatite spectra is at odds with the spectra of other pegmatitic
apatites, even though the Black Mountain apatite contains the
highest concentration of Mn. This raises the possibility of external controls on the ordering of Mn and OH, such as temperature,
magma structure, or fluid chemistry. The exchange of F and
OH between apatite and various sources is highly temperature
dependent (Tacker and Stormer 1991; Tacker 1992).
Data from the Kola apatite suggest ordering between Sr and
OH and between REE and OH. Earlier studies found that REE
partitioning between Ca1 and Ca2 is influenced by bond valence
(Hughes et al. 1991b; Fleet and Pan 1995) as well as by anion
chemistry (Fleet et al. 2000a, 2000b). Using the data of Hughes
et al. (1991a), and of Sudarsanan and Young (1972), there again
seems to be little difference between the bond valence sums for
an M2 cation in Sr-FAp vs. Sr-HAp. The slight reduction might
reduce overbonding for the Sr in the Ca2 site. Although the results for Mn ordering into Ca2 are based on several specimens,
results for Sr and REE are based on a single specimen. It is
possible that the ordering observed for Sr and REE in the Kola
apatite reflects changes in fluid chemistry during the growth of
the apatite. In either case, this paper provides a methodology
for further investigation, and FTIR will provide insight into the
influence of anions on REE site occupancies.
ACKNOWLEDGMENTS
The spectroscopy presented here was originally supported by an EPSCoR
program grant EHR-91089771 to the University of Tulsa and the University of
Oklahoma. The loan of an apatite from the Harvard Mineralogical Museum, and
gifts from D. London are gratefully acknowledged. A warm “thank you” is due
to P. Michael, University of Tulsa, for access to the FTIR microspectrometer, for
training in its use, and for discussion of the results. Thanks are also due to D. Teeters, Department of Chemistry, University of Tulsa, for access to the FTIR in their
laboratory. The work, discussion, and assistance of G. Morgan III of the University
of Oklahoma Electron Microprobe Laboratory are gratefully acknowledged. In
the development of the mathematics here, I benefited greatly from discussions
with R. Chandler (retired), J.-P. Fouque and J. Bisher, Department of Mathematics, North Carolina State University, and C. Martin, of Progress Energy. Review
by E. Libowitzky and discussion thereof resulted in interesting improvements to
the manuscript.
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145−152.
Brown, C.D. and Wise, M.A. (2001) Internal zonation and chemical evolution of
the Black Mountain Pegmatite, Maine. Canadian Mineralogist, 39, 45−55.
Brown, I.D. (1981) The bond-valence method: an empirical approach to chemical
structure and bonding. In M. O·Keeffe and A. Navrotsky, Ed., Structure and
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MANUSCRIPT RECEIVED JUNE 25, 2002
MANUSCRIPT ACCEPTED APRIL 16, 2004
MANUSCRIPT HANDLED BY ROBERT DYMEK
APPENDIX 1: RECALCULATION OF UNPOLARIZED
SPECTRA
Total absorbance (Atotal) is equal to the peak area Ai (cm–1)
of an absorber measured in orthogonal directions (Libowitzky
and Rossman 1996): Atotal = Aa + Ab + Ac. Libowitzky and Rossman (1996) demonstrate that the orthogonal directions need
not be coincident with crystallographic axes (or major axes of
the indicatrix). For convenience herein, the subscripts refer to
crystallographic axes.
For hexagonal minerals, determination of total absorbance
would require two measurements. If parallel to crystallographic
axes: Atotal = Aa + Ac. As discussed above, polarized absorbance
TACKER: HYDROXYL ORDERING IN IGNEOUS APATITE
of OH-stretching bands in apatite is zero parallel to the a-axis
and at a maximum parallel to the c-axis (Elliott 1965, 1994;
Levitt and Condrate 1970). Hence, with polarization parallel to
the c-axis: Atotal = Ac.
If (100) sections of apatite crystals are analyzed, then Ac
may be calculated from unpolarized spectra. First, consider the
transmission of unpolarized radiation. Absorbance, A, is related
to transmittance by A = –log10T, where transmittance (T) is
the intensity (I) of radiation that comes through the specimen,
divided by the intensity of incident radiation (Io). The unpolarized transmittance (Libowitzky and Rossman 1996, their Eq.
8) is given by:
Tunpolarized =
(Tmax + Tmin ) .
2
2π
Tunpolarized =
2π
∫ T (φ)dφ = ∫ (T
min
0
2∀
Taverage =
)
1
∫ Tmin cos2 φ + Tmax sin2 φdφTunpol =
2π − 0 0
(Tmin + Tmax )
2
Figure 6 of Libowitzky and Rossman (1996) demonstrates
that the averaged value fits observed data.
Unpolarized absorbance can then be calculated from polarized transmittance:
Aunpolarized = − log [(Tmax + Tmin ) 2]
Aunpolarized = − log [ 10 − Amin + 10 − Amax
(
10
Libowitzky and Rossman (1996) presented this equation
(their Eq. 8) as the result of the integration of:
1421
− Aunpolarized
(
= [ 10
− Amin
+ 10
− Amax
) 2]
) 2]
For the apatite OH, Amax is parallel to the c-axis, and parallel
to a, Amin = 0. Therefore,
10–Aunpolarized = [(1 + 10–Amax)/2]
·cos 2 φ + Tmax ·sin 2 φ dφ
0
and
However, the integration of this equation yields:
Amax = Ac = –log[(2 × 10–Aunpolarized) – 1]
Tunpolarized = (Tmin + Tmax)π.
Equation 8 of Libowitzky and Rossman (1996) is actually
the average of the function:
Unpolarized spectra were collected from (100) sections of
apatite crystals, sections that contained both Amax and Amin.