Primeasia University
Microbiology
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The accuracy of the Content should not be relied upon and should be independently verified with primary sources of information. Taylor and Francis shall not be liable for any losses, actions, claims, proceedings, demands, costs, expenses, damages, and other liabilities whatsoever or howsoever caused arising directly or indirectly in connection with, in relation to or arising out of the use of the Content. This article may be used for research, teaching, and private study purposes. Any substantial or systematic reproduction, redistribution, reselling, loan, sub-licensing, systematic supply, or distribution in any form to anyone is expressly forbidden.
Objective: Helianthus annuus seeds contain various chemical components and evaluated for different biological activities. The present study was carried out to investigate the antidepressant and anxiolytic activity of methanolic extract of... more
Objective: Helianthus annuus seeds contain various chemical components and evaluated for different biological activities. The present study was carried out to investigate the antidepressant and anxiolytic activity of methanolic extract of Helianthus annuus seeds in mice model. Methods: The efficacy of extract (100-200mg/kg) was compared with standard antidepressant drug Imipramine 60 mg/kg and anxiolytic drug diazepam (1mg/kg). Antidepressant activity was done in mice model by tail suspension test and anxiolytic activity was determined both light-dark box test and elevated plus maze test. Results: The results revealed that the methanol extract of Helianthus annuus seeds showed a significant result in tail suspension test at 100 mg/kg (93 ± 0.47 seconds) and 200 mg/kg (78 ± 1.3 seconds) and moderate result in light-dark box test at 100 mg/kg (63±0.62) and 200 mg/kg (72±0.85), in elevated plus maze test at 100 mg/kg (51± 0.58 seconds) and 200 mg/kg (60±0.62 seconds). Conclusion: The r...
Abstract—Health system is one of the vital components for the<br> people of any country. The use of electronic health in Bangladesh is<br> very limited. As a result, health cost is increasing day by day and the<br> poor... more
Abstract—Health system is one of the vital components for the<br> people of any country. The use of electronic health in Bangladesh is<br> very limited. As a result, health cost is increasing day by day and the<br> poor people of Bangladesh could not bear the increased health cost.<br> In this study, we are going to propose and develop a cost effective<br> distributed electronic health system for patient data handing<br> considering Bangladesh perspectives. By using this model, both<br> patients and doctors will be connected through our developed system.<br> We have used open source electronic health system, business process<br> diagram and distributed characteristics of health system in this<br> research. We have successfully shown from the result section that this<br> model works as a distributed electronic health system. Our developed<br> system is interoperable and cost effective which are the noble<br>...
The present study aims at the microbiological analysis of export oriented frozen fishes, namely, Jew fish, Tongue Sole fish, Cuttle fish, Ribbon fish, Queen fish, and fish processing water and ice from a view of public health safety and... more
The present study aims at the microbiological analysis of export oriented frozen fishes, namely, Jew fish, Tongue Sole fish, Cuttle fish, Ribbon fish, Queen fish, and fish processing water and ice from a view of public health safety and international trade. Microbiological analysis includes the determination of total viable aerobic count by standard plate count method and enumeration of total coliforms and fecal coliforms by most probable number method. The presence of specific fish pathogens such as Salmonella spp. and Vibrio cholerae were also investigated. The TVAC of all the samples was estimated below 5 × 10 5 cfu/g whereas the total coliforms and fecal coliforms count were found below 100 MPN/g and 10 MPN/g, respectively, which meet the acceptable limit specified by International Commission of Microbiological Specification for Food. The microbiological analysis of water and ice also complies with the specifications having TVAC < 20 cfu/mL, and total coliforms and fecal coliforms count were below the limit detection of the MPN method. Specific fish pathogens such as Salmonella sp. and V. cholerae were found absent in all the samples under the investigation. From this study, it can be concluded that the investigated frozen fishes were eligible for export purpose and also safe for human consumption.
- by Md. Ekramul karim and +1
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Typhoid fever (Enteric fever) is a serious life-threatening illness caused by mostly Salmonella Typhi and also by Salmonella Paratyphi to a lesser extent. This study was carried out to isolate, identify Salmonella spp. from the blood... more
Typhoid fever (Enteric fever) is a serious life-threatening illness caused by mostly Salmonella Typhi and also by Salmonella Paratyphi to a lesser extent. This study was carried out to isolate, identify Salmonella spp. from the blood samples of patients who were suspected of suffering from typhoid fever and to determine the antibiotic susceptibility pattern of the selected Salmonella spp. Salmonella spp. was detected in 122 of 1167 samples. Among which 87 (77.68%) were Salmonella Typhi and 25 (22.32%) were Salmonella Paratyphi. The most susceptible age group for Salmonella spp. is 21-30 years. Males (67.86%) are mostly infected by Salmonella spp. than females (32.14%). Salmonella Typhi (77.68%) was found as the predominant etiological agent of typhoid fever followed by Salmonella Paratyphi (22.32%) in our study. Salmonella spp. were resistant against Nalidixic acid, Co-trimoxazole and Pipercillin but sensitive against Ceftriaxone, Imipenem, Meropenem, Amikacin, Cefixime, Ceftazidime, Gentamicin, Cefotaxime. From this study, it can be concluded that these third generation antibiotics still can be used as effective drugs for the treatment of typhoid fever.
- by Sohana Al Sanjee
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The indiscriminate use of agricultural pesticides has created serious health and environmental problems in many developing countries including Bangladesh. On the other hand, Bacillus thuringiensis kurstaki (Btk) has long been used... more
The indiscriminate use of agricultural pesticides has created serious health and environmental problems in many developing countries including Bangladesh. On the other hand, Bacillus thuringiensis kurstaki (Btk) has long been used commercially as pest control agents particularly against lepidopteran vegetable pests. In this study, new potential Btk-like isolates were collected from different sources (viz. soil, leaves, insects, stored product dust etc.) and regions of Bangladesh. Acetate selection-heat treatment-lecithinase production and haemolytic activity were initially performed to narrow down the spectrum for selection of Btk-likeisolates. Specific biochemical tests (Es+, Sa+, Le+, Su-) were performed to differentiate Btk from other subspecies. Based on these tests, of 148 Bt isolates, 27.7% (41 Bt isolates) were confirmed as Bt kurstaki isolates. The 41 isolates were investigated for the presence of cry1, cry1A and cry2A genes by PCR identification with gene specific primers and demonstrated some level of diversity with respect to major genes content in the strains. Nine of the isolates were found to carry all three genes while another nine contained both cry1 and cry2A genes. 29, 22 and 16 of the isolates contained singly cry1, cry2A or cry1A gene respectively. Plasmid DNA was purified which ranged from 12-15 kb in most of the isolates which were very similar to the plasmid pattern of Btk HD-73. Bioassay was performed with the isolates harbouring Lepidoptera specific cry1A genes against vegetable pest Bactrocera cucurbitae. Five of the isolates having higher activity close to Btk HD-73 were considered for determination of LC50 and LC90. The results will be a useful basis for developing effective bio-pesticides to decrease the use of hazardous chemicals in Bangladesh agriculture.
- by Dr. Md. Asaduzzaman and +3
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The present study was aimed at designing a cost effective medium for increasing the δ-endotoxin (Cry protein) synthesis by Bacillus thuringiensis (Bt) kurstaki HD-73 and indigenous Bt JSc1 harboring potential cry genes active against... more
The present study was aimed at designing a cost effective medium for increasing the δ-endotoxin (Cry protein) synthesis by Bacillus thuringiensis (Bt) kurstaki HD-73 and indigenous Bt JSc1 harboring potential cry genes active against Lepidoptera insect orders. In this regard, locally available cheap molasses as carbon source, soybean extract as nitrogen source, sea water as trace elements source, cystine as sporulation/growth factor were considered to design a cost effective medium. Molasses and soybean extract in place of glucose and peptone in glucose-peptone (GP) medium supported 78.85% increase in δ-endotoxin synthesis in shake flask culture. The effect of cystine on endotoxin synthesis was highly pronounced in two media with a range of 80.32 to 110% higher δ-endotoxin under comparable fermentation conditions. While, substituting basal salts with sea water, Btk HD-73 yielded satisfactory and comparable endotoxin (74.3% of yield with basal salts). It was detected that the rapid decrease of endotoxin synthesis in the culture after 24 h was due to the degradation by the endogenous protease, synthesized with the progress of fermentation. This degradation of the endotoxin was much better protected (1.23 mg/ml endotoxin versus 0.312 mg/ml) by adding 4% ammonium sulfate in the optimized medium. The medium thus formulated with molasses, soybean extract, ammonium sulfate, cystine and sea water was then used in 3.0 L bioreactor cultivation for endotoxin synthesis by both Btk HD-73 and Bt JSc1 under 30% saturation of dO2 through cascade control of agitation and aeration producing a higher yield of δ-endotoxin (2.1 and 2.63 mg/ml, respectively). The present results may successfully be used for large scale production of Bt biopesticide in Bangladesh.
- by Dr. Md. Asaduzzaman and +3
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- Bt biopesticide
Nevertheless, emphasis should be given to promote the industrial growth in Bangladesh for sustainable economic development while dependency on agricultural economy alone is at a stake due to urbanization, natural calamities (erosion,... more
Nevertheless, emphasis should be given to promote the industrial growth in Bangladesh for sustainable economic development while dependency on agricultural economy alone is at a stake due to urbanization, natural calamities (erosion, flood, salinity and droughts) and increase in people land ratio. The biotech industries based on microbial catalysis has got priority globally due to its unique potentialities over chemical process particularly in the bioprocess based on cheap agricultural raw materials, low energy involvement and rare environmental pollution. Considering the annual import of the bio-products, local market demand, availability of critical skilled man power and resources in Bangladesh, the biotech industries establishment should be believed favorable. In this connection, the regulating bodies should assess the advancement and potentialities of local existing Research & Development sectors and take essentials steps for achieving the goals. In view of the above, our research development and findings on bioprocess for industrial enzymes for leather processing and mass production of Bt biopesticde for eco-friendly pest management are described. The results obtained are ready to be promoted to commercial level which is definitely a stimulatory and pioneering interface for the contemporary and near future biotech industries in Bangladesh.
- by Dr. Md. Asaduzzaman and +3
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Bactrocera cucurbitae (melon fruit fly) is one of the most detrimental vegetable-damaging pests in Bangladesh. The toxicity of Bacillus thuringiensis (Bt) has been reported against a few genera of Bactrocera in addition to numerous other... more
Bactrocera cucurbitae (melon fruit fly) is one of the most detrimental vegetable-damaging pests in Bangladesh. The toxicity of Bacillus thuringiensis (Bt) has been reported against a few genera of Bactrocera in addition to numerous other insect species. Bt strains, harbouring cry1A-type genes were, therefore, assayed in vivo against the 3rd instar larvae of B. cucurbitae in this study. The biotype-based prevalence of cry1 and cry1A genes was calculated to be 30.8% and 11.16%, respectively, of the test strains (n=224) while their prevalence was greatest in biotype kurstaki. Though three indigenous Bt strains from biotype kurstaki with close genetic relationship exhibited higher toxicity, maximum mortalities were recorded for Btk HD-73 (96%) and the indigenous Bt JSc1 (93%). LC50 and LC99 values were determined to be 6.81 and 8.32 for Bt JSc1, 7.30 and 7.92 for Bt SSc2, and 6.99 and 7.67 for Btk HD-73, respectively. The cause of toxicity and its variation among the strains was found to be correlated with the synergistic toxic effects of cry1, cry2, cry3 and cry9 gene products, i.e. relevant Cry proteins. The novel toxicity of the B. thuringiensis strains against B. cucurbitae revealed in the present study thus will help in developing efficient and eco-friendly control measures such as Bt biopesticides and transgenic Bt cucurbits.
- by Asma Akter and +3
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- Bt biopesticide
Bacteriocins are ribosomally synthesized antibacterial peptides which have the potential to be used as natural food preservatives as well as alternative to antibiotics. Here, we report the production of bacteriocin-like inhibitory... more
Bacteriocins are ribosomally synthesized antibacterial peptides which have the potential to be used as natural food
preservatives as well as alternative to antibiotics. Here, we report the production of bacteriocin-like inhibitory
substances (BLIS) from the indigenous strains of Bacillus thuringiensis. Deferred antagonism bacteriocin assay and
agar well diffusion methods suggested that several of the tested strains have high levels of bacteriocin-like activity
against the common food-borne pathogens, Listeria monocytogenes, Staphylococcus aureus and Bacillus cereus.
These bacteriocins are generally produced at the mid-logarithmic phase of growth with optimum temperature of 37
ºC, pH-7.0 and 24 h of incubation. Heat stability assay demonstrated that the bacteriocins produced from the strains
are highly heat stable and can retain activity up to 100 ºC. Our study suggests that these bacteriocins may be
potential candidates for use as biodegradable natural food preservatives and alternative antimicrobial agents to solve
the increasing trends of problems of antibiotic resistance.
Key words: Bacteriocin, Bacillus thuringiensis, antimicrobial activity, Bangladeshi strains, food-borne pathogens
preservatives as well as alternative to antibiotics. Here, we report the production of bacteriocin-like inhibitory
substances (BLIS) from the indigenous strains of Bacillus thuringiensis. Deferred antagonism bacteriocin assay and
agar well diffusion methods suggested that several of the tested strains have high levels of bacteriocin-like activity
against the common food-borne pathogens, Listeria monocytogenes, Staphylococcus aureus and Bacillus cereus.
These bacteriocins are generally produced at the mid-logarithmic phase of growth with optimum temperature of 37
ºC, pH-7.0 and 24 h of incubation. Heat stability assay demonstrated that the bacteriocins produced from the strains
are highly heat stable and can retain activity up to 100 ºC. Our study suggests that these bacteriocins may be
potential candidates for use as biodegradable natural food preservatives and alternative antimicrobial agents to solve
the increasing trends of problems of antibiotic resistance.
Key words: Bacteriocin, Bacillus thuringiensis, antimicrobial activity, Bangladeshi strains, food-borne pathogens
Genetic diversity is highly relevant and significant in discovering novel insecticidal genes in Bacillus thuringiensis (Bt) strains and to deal with the problems of emerging insect resistance towards Bt biopesticides. In view of this,... more
Genetic diversity is highly relevant and significant in discovering novel insecticidal genes in Bacillus thuringiensis (Bt) strains and to deal with the problems of emerging insect resistance towards Bt biopesticides. In view of this, Random Amplified Polymorphic DNA (RAPD)-PCR analysis was performed with a decamer AGCTCAGCCA for molecular typing of 177 Bt strains of Bangladesh to determine their genetic diversity. These Bt strains were allocated into 15 genomic types with their binary matrices as determined from the dendrogram based on a standardized distance in scale bar. Genotype 9 and 11 were the largest among others, each containing more than 25% of the Bt strains. The average diversity index, as deduced for each group by cluster: isolate ratio at a specific distance, was higher for locations (0.27 ± 0.098) than that for biotypes (0.23 ± 0.046) which indicates an unmingled and vertical transfer of biochemical properties among the strains. Prevalence of agriculturally important subgroups of cry1 gene in indigenous Bt strains was also determined where cry1Aa and cry1Ca gene were found to be the most prevalent (21.74%). While analyzing the distribution pattern of cry genes, they were observed to be present in all RAPD- genotypes but genotype 10 and were most prevalent in genotypes 1, 6 and 9. The phylogeny reconstruction among the strains was performed by neighbor-joining method with the 16S rRNA gene sequences and the correlation among the phylogeny, RAPD genotypes, Biotypes and presence of cry genes were analyzed.
The present study was carried out to develop a sustainable production mcdium using locally avlilabl€ cheap raw mat€rials for biopesticide production by Bacillus thuingiensrs subsP. *.r$tari (Bt*) HD-73. In submerged fermentat'on (SmF)... more
The present study was carried out to develop a sustainable production mcdium using locally avlilabl€ cheap raw mat€rials for biopesticide production by Bacillus thuingiensrs subsP. *.r$tari (Bt*) HD-73. In submerged fermentat'on (SmF) condition, the cotrvetrtional Luria-Berta[i (LB) medium which was enriched with nitrogen source (107o d€frtted soybean meal) supported 28,579lo sporulation aa nd l2S"/" €ndotoxin incr€as€ over LB (atone). The effect of cystine on sporulation atrd eudotoxin synthesis was highly protroutrced in LB-soyb€an medium (LBS) with a ratrg€ of lg,54y" and 13t,357o higher endotoxin yield respectively in SmF conditioo' while basal salts supplemented in soybeatr-cystine (sMc) medium, it result€d in 7.659/o €ndotoxin yield compared to LB-soyb€an-cystin€ (LBSC) medium. Addition of molasses baltnced th€ c: N ratio io the sMc medium thus h€lping 84.859/. higher eodotoxin syuthesis after 24 hours lermentation. Substitutiou of basal safts with cost effective s€a water yi€lded abott 19.27"h less endotoxin. The optimum medium thus obtained consisting of soybean extyact-molasscs-cystine with s€a water was used in 3.{} L bioreactor cultivation for endotoxin synthesis by Btk HD-13 under 30%o saturation of dO2 through cascade of agitstion and aeration. The production rate obtained was 1.67 fold higher i|r bioreactor than in shake flask culture'
- by Dr. Md. Asaduzzaman and +1
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Integrated Pest Management (IPM) and bio-intensive pest management (BIPM) (where Bt biopesticide is an indispensible component of it) are the suggested alternatives of chemical pesticides. So, a holistic approach to the isolation and... more
Integrated Pest Management (IPM) and bio-intensive pest management (BIPM) (where Bt biopesticide is an indispensible component of it) are the suggested alternatives of chemical pesticides. So, a holistic approach to the isolation and detection of potential Bt strains, production at industrial scale and administration in the field is necessary to include Bt biopesticide in the IPM and BIPM of Bangladesh. In this connection, the bioinsecticide prepared from potential indigenous Bt strain JSc1 was applied in cabbage, cauliflower and organic tea farming and was found to be efficient in controlling the target lepidopteran pests such as Helicoverpa armigera, Spodoptera litura, Plutella xylostella, Hyposidra spp. etc. Results indicated that more than 85% of the treated crops were protected from the infestation and destruction by the pests. Obtained data analyzed using ANOVA test suggested the inclusion of Bt biopesticide in the IPM of Bangladesh as no such differences were observed with the chemical pesticides currently in use.
Aims: Bacillus licheniformis MZK-05 is a keratinolytic bacterium having potential in dehairing of leather and feather hydrolysis. The present study aimed at to improving the production level of keratinase through gene cloning and... more
Aims: Bacillus licheniformis MZK-05 is a keratinolytic bacterium having potential in dehairing of leather and feather hydrolysis. The present study aimed at to improving the production level of keratinase through gene cloning and expression of recombinant keratinase. Methodology and results: Bacillus licheniformis MZK-05 produced an amplicon of 1,156 bp in a polymerase chain reaction while targeting the gene, kerA, responsible for the enzyme keratinase. The amplicon was subsequently cloned into the plasmid vector pGEX-6p-2 for expression in Escherichia coli BL21. A 58 kD GST-KerA fusion protein was expressed upon IPTG induction which was eventually cleaved by PreScission protease that produced a 39 kD protein. A corresponding increase in proteolytic (312 U/mL) and keratinolytic (196 U/mL) activity were observed with the expressed keratinase. Specific enzyme activities for protease and keratinase, an indication of efficiency of the enzyme, were 2621.84 U/mg and 1647 U/mg, respectively and the specific keratinase activity was the highest activity ever reported by any recombinant bacterial strain. Conclusion, significance and impact study: Since the production of keratinase by wild type strain is limited to a certain level, the industrial need could be met by improving the production level through gene cloning and expression of recombinant keratinase. In this connection, the cloning of kerA gene from B. licheniformis MZK-05 into pGEX-6p-2 vector, its expression in Escherichia coli BL21 host and prediction of 3-D model of the expressed protein were performed which will be the basis for industrial production of keratinase in Bangladesh.
Proteolytic bacteria isolated from municipal solid wastes (MSW) were identified as Serratia marcescens A3 and Pseudomonas putida A2 based on 16S rDNA sequencing. Protease produced through fermentation of organic MSW by these bacteria... more
Proteolytic bacteria isolated from municipal solid wastes (MSW) were identified as Serratia marcescens A3 and Pseudomonas putida A2 based on 16S rDNA sequencing. Protease produced through fermentation of organic MSW by these bacteria under some optimized physicochemical parameters was partially purified and characterized. The estimated molecular mass of the partially purified protease from S. marcescens and P. putida was approximately 25 and 38 kDa, respectively. Protease from both sources showed low K m 0.3 and 0.5 mg ml À1 and high V max 333 and 500 mmole min À1 at 40 °C, and thermodynamics analysis suggested formation of ordered enzyme-substrate (E-S) complexes. The activation energy (E a) and temperature quotient (Q 10) of protease from S. marcescens and P. putida were 16.2 and 19.9 kJ/mol, and 1.4 and 1.3 at temperature range from 20 to 40 °C, respectively. Protease of the both bacterial isolates was serine and cysteine type. The protease retained approximately 97% of activity in the presence of sodium dodecyl sulphate. It was observed that the purified protease of S. marcescens could remove blood stains from white cotton cloth and degrade chicken flesh remarkably. Our study revealed that organic MSW can be used as raw materials for bacterial protease production and the protease produced by S. marcescens A3 might be potential for applications.
The scarcity of hygienic drinking water is a normal phenomenon in the coastal areas of Bangladesh due to the high salinity of ground water. The inhabitants of this locality, therefore, live on alternative supplies of water including... more
The scarcity of hygienic drinking water is a normal phenomenon in the coastal areas of Bangladesh due to the high salinity of ground water. The inhabitants of this locality, therefore, live on alternative supplies of water including rain-fed pond water, and rain-water with persistent complex microbial interactions therein, often contaminated with life-threatening pathogens. Hence, this study was aimed at analyzing the prevalence of Vibrio cholerae (Vc) in the alternative drinking waters of Mathbaria, a coastal subdis-trict neighboring the Bay of Bengal, the efficacy of pond sand filter (PSF) and the co-association among Bacillus-like spore formers (Sf) and Vc. Vc presumably entrapped into the membrane filter was enriched in alkaline peptone water medium and was isolated on selective thiosulfate-citrate-bile salts-sucrose and taurocholate-tellurite-gelatin agar media. They were finally identified by immunochromatographic one step rapid test and serology test. A total of 26% Vc positive samples were obtained out of 100 [ponds—48, household (HH)—29, and PSFs—23] where 13% cases were pathogenic (Vc O1) and 13% were non-pathogenic (Vc non-O1/non-O139). The distribution of Vc as observed was 33, 26, and 13.8% in waters derived from pond surface, PSF, and HH reservoirs, respectively, and for pathogenic type, it was 62.5%, 50%, and nil, respectively. Although none of the samples was identified with pathogenic Vc O139, the statistics represents a significant and augmentative risk of cholera outbreak in the focused area. The antibiotic sensitivity pattern in this study resembled the trend observed during last few years for Vc. The PSF demonstrated its inability to remove Vc from any of the samples and in addition, the filter itself was evidenced to be the source of pathogens and spores in further contamination and transmission. The development of biofilm in the PSF could be hypothesized as the reservoir in contaminating pathogen-free water samples. From the test of homogeneity, the risk levels of alternative water sources were estimated equal regarding Vc. Simultaneously, it was determined statistically that the prevalence of Vc, by no means, is influenced by Bacillus-like Sf be it for pond surface, HH, or PSF derived water.