MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
QC and filtering of genome skims, followed by organelle assembly and/or genome analysis
Polap is a plant mtDNA assembly pipeline using Flye long-read assembler guided by organelle gene annotation.
Bioinformatic work for a phylogenomic study on ʻekaha kū moana (black corals) collected in the Hawaiian Archipelago
This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
Sexual inference based on mitochondrial genome content
This repository serves as a resource for the scripts and data associated with our research article "ORFans in Mitochondrial Genomes of Marine Polychaete Polydora"
PrecisionCallerPipeline (PCP) automatically takes Precision ID mtDNA Whole Genome Panel (Thermo Fisher Scientific, USA) FASTQ files and outputs BAM files correctly aligned to the rCRS.
A free and easy-to-use pipeline to analyse data from ancient NCR-mtDNA sequences obtained by amplicon-based NGS methods
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