Organization of interphase chromatin (Q36346077)

13 August 2017

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title

Organization of interphase chromatin (English)

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13 August 2017

author name string

Rachel A Horowitz-Scherer

series ordinal

1

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13 August 2017

Christopher L Woodcock

series ordinal

2

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13 August 2017

publication date

17 December 2005

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13 August 2017

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13 August 2017

volume

115

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13 August 2017

issue

1

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13 August 2017

page(s)

1-14

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Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III

13 August 2017

cites work

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Crossref

https://api.crossref.org/works/10.1007%2FS00412-005-0035-3

Role of the M-loop and reactive center loop domains in the folding and bridging of nucleosome arrays by MENT.

21 January 2018

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12 December 2020

Genome-wide location and function of DNA binding proteins

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12 December 2020

Crystal structure of the nucleosome core particle at 2.8 Å resolution

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12 December 2020

Rapid spontaneous accessibility of nucleosomal DNA.

1 reference

12 December 2020

Chromatin fibers, one-at-a-time

1 reference

12 December 2020

Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases

1 reference

12 December 2020

Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome

1 reference

12 December 2020

The glucocorticoid receptor: rapid exchange with regulatory sites in living cells

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12 December 2020

The core histone N-terminal tail domains function independently and additively during salt-dependent oligomerization of nucleosomal arrays

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12 December 2020

Looping and interaction between hypersensitive sites in the active beta-globin locus

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12 December 2020

Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail

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12 December 2020

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12 December 2020

Genome-scale identification of nucleosome positions in S. cerevisiae

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12 December 2020

Measuring the size of biological nanostructures with spatially modulated illumination microscopy

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12 December 2020

Physical properties of a genomic condensed chromatin fragment

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12 December 2020

Methyl CpG-binding proteins and transcriptional repression

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12 December 2020

Formation of higher-order secondary and tertiary chromatin structures by genomic mouse mammary tumor virus promoters

1 reference

12 December 2020

Genome-wide map of nucleosome acetylation and methylation in yeast

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12 December 2020

A statistical thermodynamic model applied to experimental AFM population and location data is able to quantify DNA-histone binding strength and internucleosomal interaction differences between acetylated and unacetylated nucleosomal arrays

1 reference

12 December 2020

Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus

1 reference

12 December 2020

Role of histone acetylation in the assembly and modulation of chromatin structures

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12 December 2020

Post-transcriptional gene silencing by siRNAs and miRNAs

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12 December 2020

The concept of self-organization in cellular architecture

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12 December 2020

Segmentation of two- and three-dimensional data from electron microscopy using eigenvector analysis.

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12 December 2020

Nucleosome and chromatin fiber dynamics

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12 December 2020

Cation-chromatin binding as shown by ion microscopy is essential for the structural integrity of chromosomes

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12 December 2020

Mapping of genetic and epigenetic regulatory networks using microarrays

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12 December 2020

Proximity among distant regulatory elements at the beta-globin locus requires GATA-1 and FOG-1.

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12 December 2020

DNA-loop formation on nucleosomes shown by in situ scanning force microscopy of supercoiled DNA

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12 December 2020

A study of chromosomes with the electron microscope.

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12 December 2020

Chromatin organization re-viewed

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12 December 2020

Differential large-scale chromatin compaction and intranuclear positioning of transcribed versus non-transcribed transgene arrays containing beta-globin regulatory sequences.

1 reference

12 December 2020

Genome function and nuclear architecture: from gene expression to nanoscience

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12 December 2020

Quantitative electron energy loss spectroscopy in biology

1 reference

12 December 2020

The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon

1 reference

12 December 2020

Yeast histone H3 and H4 amino termini are important for nucleosome assembly in vivo and in vitro: redundant and position-independent functions in assembly but not in gene regulation

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12 December 2020

Higher-order structure of chromatin and chromosomes

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12 December 2020

The organized chromatin domain of the repressed yeast a cell-specific gene STE6 contains two molecules of the corepressor Tup1p per nucleosome

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12 December 2020

The functional architecture of the nucleus as analysed by ultrastructural cytochemistry

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12 December 2020

Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

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12 December 2020

Chromatin fibers observed in situ in frozen hydrated sections. Native fiber diameter is not correlated with nucleosome repeat length

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12 December 2020

Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.

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12 December 2020

Distinctive higher-order chromatin structure at mammalian centromeres

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12 December 2020

Higher order chromatin architecture in the cell nucleus: on the way from structure to function.

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12 December 2020

Interchromosomal associations between alternatively expressed loci

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12 December 2020

Transcriptional profiling of a mouse model for Rett syndrome reveals subtle transcriptional changes in the brain

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12 December 2020

Modulation of chromatin folding by histone acetylation

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12 December 2020

Role of linker histone in chromatin structure and function: H1 stoichiometry and nucleosome repeat length

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12 December 2020

Salt-dependent intra- and internucleosomal interactions of the H3 tail domain in a model oligonucleosomal array

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12 December 2020

Mapping nucleosome locations on the 208-12 by AFM provides clear evidence for cooperativity in array occupation

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12 December 2020

Cryo-electron microscopy of vitrified chromosomes in situ.

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12 December 2020

Physical Constraints in the Condensation of Eukaryotic Chromosomes. Local Concentration of DNA versus Linear Packing Ratio in Higher Order Chromatin Structures†

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12 December 2020

Chromatin fiber structure: morphology, molecular determinants, structural transitions.

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12 December 2020

Fewer Genes, More Noncoding RNA

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12 December 2020

Quantitative X-ray mapping of biological cryosections

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12 December 2020

Noise Reduction in Electron Tomographic Reconstructions Using Nonlinear Anisotropic Diffusion

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12 December 2020

Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome

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12 December 2020

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

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12 December 2020

Common effects of acidic activators on large-scale chromatin structure and transcription

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12 December 2020

Automated Electron Microscope Tomography of Frozen–Hydrated Chromatin: The Irregular Three-Dimensional Zigzag Architecture Persists in Compact, Isolated Fibers

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12 December 2020

MENT, a heterochromatin protein that mediates higher order chromatin folding, is a new serpin family member

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12 December 2020

Fast, long-range, reversible conformational fluctuations in nucleosomes revealed by single-pair fluorescence resonance energy transfer

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12 December 2020

The role of the RNAi machinery in heterochromatin formation

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12 December 2020

Chromatin organization in the mammalian nucleus

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12 December 2020

Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins

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12 December 2020

Generic features of tertiary chromatin structure as detected in natural chromosomes

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12 December 2020

Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation

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12 December 2020

The biological functions of the methyl-CpG-binding protein MeCP2 and its implication in Rett syndrome.

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12 December 2020

Strategies for the reconstitution of chromatin.

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12 December 2020

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

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12 December 2020

Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2

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12 December 2020

Large-scale chromatin structural domains within mitotic and interphase chromosomes in vivo and in vitro

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12 December 2020

Positioning the genome within the nucleus

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12 December 2020

The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media

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12 December 2020

RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

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12 December 2020

Sir3-dependent assembly of supramolecular chromatin structures in vitro

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12 December 2020

From micro to nano: recent advances in high-resolution microscopy

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12 December 2020

Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast

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12 December 2020

Spatial proximity of translocation-prone gene loci in human lymphomas

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12 December 2020

Nucleosome arrays reveal the two-start organization of the chromatin fiber

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12 December 2020

Closed chromatin loops at the ends of chromosomes

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12 December 2020

Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin

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12 December 2020

Yeast histone H2A and H2B amino termini have interchangeable functions.

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12 December 2020

The higher-order structure of chromatin: evidence for a helical ribbon arrangement

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12 December 2020

Solenoidal model for superstructure in chromatin

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12 December 2020

Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure

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12 December 2020

Internal organisation of the nucleus: assembly of compartments by macromolecular crowding and the nuclear matrix model

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12 December 2020

Evidence for nonrandom behavior in 208-12 subsaturated nucleosomal array populations analyzed by AFM

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12 December 2020

Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution

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12 December 2020

Nucleosomal Arrays Can Be Salt-Reconstituted on a Single-Copy MMTV Promoter DNA Template: Their Properties Differ in Several Ways from Those of Comparable 5S Concatameric Arrays

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12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

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12 December 2020

Visualizing chromosome dynamics with GFP.

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12 December 2020

A role for macromolecular crowding effects in the assembly and function of compartments in the nucleus

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12 December 2020

Structure and dynamic properties of a glucocorticoid receptor-induced chromatin transition

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12 December 2020

The Dynamics of Chromosome Organization and Gene Regulation

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12 December 2020

Trichostatin A-induced histone acetylation causes decondensation of interphase chromatin

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12 December 2020

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

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12 December 2020

New computational approaches for analysis of cis-regulatory networks.

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12 December 2020

A high-resolution map of active promoters in the human genome

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12 December 2020

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

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12 December 2020

Quantitative water mapping of cryosectioned cells by electron energy-loss spectroscopy

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12 December 2020

Translating the Histone Code

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12 December 2020

High concentration of DNA in condensed chromatin.

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12 December 2020

Physicochemical studies of the folding of the 100 A nucleosome filament into the 300 A filament. Cation dependence

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12 December 2020

MeCP2 in neurons: closing in on the causes of Rett syndrome

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12 December 2020

Dynamics of chromatin, proteins, and bodies within the cell nucleus

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12 December 2020

The eukaryotic genome: a system regulated at different hierarchical levels

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12 December 2020

Using atomic force microscopy to study nucleosome remodeling on individual nucleosomal arrays in situ

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12 December 2020

A method for the in vitro reconstitution of a defined "30 nm" chromatin fibre containing stoichiometric amounts of the linker histone

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12 December 2020

Nucleosomes facilitate their own invasion

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12 December 2020

Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length.

1 reference

12 December 2020

Chromatin compaction by a polycomb group protein complex

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12 December 2020

The nucleosomal array: structure/function relationships

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12 December 2020

Ultrastructural preservation of nuclei and chromatin: improvement with low-temperature methods.

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12 December 2020

High mobility of proteins in the mammalian cell nucleus

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12 December 2020

Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames

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12 December 2020

Quantitation of GFP-fusion proteins in single living cells

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12 December 2020

Dynamic binding of histone H1 to chromatin in living cells

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12 December 2020

Does looping and clustering in the nucleus regulate gene expression?

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12 December 2020

Conformational dynamics of the chromatin fiber in solution: determinants, mechanisms, and functions

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12 December 2020

Identification of macromolecular complexes in cryoelectron tomograms of phantom cells

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12 December 2020

Protein dynamics in the nuclear compartment

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12 December 2020

The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote

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12 December 2020

Counting nucleosomes in living cells with a combination of fluorescence correlation spectroscopy and confocal imaging

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12 December 2020

4Pi-microscopy of the Golgi apparatus in live mammalian cells

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12 December 2020

Mammalian telomeres end in a large duplex loop

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12 December 2020

Heterochromatin structure and function

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12 December 2020

Selective requirements for histone H3 and H4 N termini in p300-dependent transcriptional activation from chromatin.

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12 December 2020

Unexpected binding motifs for subnucleosomal particles revealed by atomic force microscopy

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12 December 2020

10.1007/S00412-005-0035-3

Identifiers

DOI

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13 August 2017

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