RNA bulges as architectural and recognition motifs (Q33879873)

29 July 2017

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title

RNA bulges as architectural and recognition motifs (English)

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29 July 2017

Hermann T

1

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29 July 2017

Patel DJ

series ordinal

2

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29 July 2017

publication date

1 March 2000

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29 July 2017

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29 July 2017

volume

8

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29 July 2017

issue

3

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29 July 2017

page(s)

R47-54

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RNA folds: insights from recent crystal structures

29 July 2017

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7 January 2021

Proton NMR and structural features of a 24-nucleotide RNA hairpin

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7 January 2021

Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage

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7 January 2021

Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex

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7 January 2021

Molecular recognition in the bovine immunodeficiency virus Tat peptide-TAR RNA complex

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7 January 2021

The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges

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7 January 2021

A small metalloribozyme with a two-step mechanism

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Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis

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NMR solution structure of the lead-dependent ribozyme: evidence for dynamics in RNA catalysis

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7 January 2021

A magnesium ion core at the heart of a ribozyme domain

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7 January 2021

Crystal structure of an RNA bacteriophage coat protein–operator complex

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7 January 2021

Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution

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7 January 2021

Saccharide-RNA recognition in an aminoglycoside antibiotic-RNA aptamer complex

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7 January 2021

Solution structure of the tobramycin-RNA aptamer complex

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Saccharide-RNA recognition in a complex formed between neomycin B and an RNA aptamer

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7 January 2021

RNA architecture dictates the conformations of a bound peptide

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7 January 2021

Anchoring an extended HTLV-1 Rex peptide within an RNA major groove containing junctional base triples

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7 January 2021

Exploration of metal ion binding sites in RNA folds by Brownian-dynamics simulations

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7 January 2021

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7 January 2021

A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation

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7 January 2021

The bend in RNA created by the trans-activation response element bulge of human immunodeficiency virus is straightened by arginine and by Tat-derived peptide

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7 January 2021

Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge

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7 January 2021

Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy

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7 January 2021

The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein

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7 January 2021

Dissection of the proposed base triple in human immunodeficiency virus TAR RNA indicates the importance of the Hoogsteen interaction

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7 January 2021

Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex

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7 January 2021

Deep penetration of an alpha-helix into a widened RNA major groove in the HIV-1 rev peptide-RNA aptamer complex

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7 January 2021

Aminoglycoside binding to the hammerhead ribozyme: a general model for the interaction of cationic antibiotics with RNA

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7 January 2021

Docking of cationic antibiotics to negatively charged pockets in RNA folds

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7 January 2021

Role REVersal: understanding how RRE RNA binds its peptide ligand

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7 January 2021

Adaptive recognition in RNA complexes with peptides and protein modules

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7 January 2021

Saccharide-RNA recognition

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7 January 2021

Small molecules that selectively block RNA binding of HIV-1 Rev protein inhibit Rev function and viral production

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7 January 2021

Modeling RNA-ligand interactions: the Rev-binding element RNA-aminoglycoside complex.

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Inhibition of HIV-1 Rev-RRE interaction by diphenylfuran derivatives

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7 January 2021

An inhibitor of the Tat/TAR RNA interaction that effectively suppresses HIV-1 replication

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7 January 2021

Binding of Hoechst 33258 to the TAR RNA of HIV-1. Recognition of a pyrimidine bulge-dependent structure

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7 January 2021

Inhibitors of protein-RNA complexation that target the RNA: specific recognition of human immunodeficiency virus type 1 TAR RNA by small organic molecules

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7 January 2021

Inhibition of HIV-1 Tat-TAR interaction by diphenylfuran derivatives: effects of the terminal basic side chains

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7 January 2021

Bulge-specific cleavage in transactivation response region RNA and its DNA analogue by neocarzinostatin chromophore

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7 January 2021

Effect of ribonucleotide substitution on nucleic acid bulge recognition by neocarzinostatin

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7 January 2021

Non-Watson-Crick base pairs in RNA-protein recognition

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7 January 2021

HIV-1 Rev regulation involves recognition of non-Watson-Crick base pairs in viral RNA.

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7 January 2021

Selective optimization of the Rev-binding element of HIV-1.

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7 January 2021

Molecular recognition in the FMN-RNA aptamer complex

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7 January 2021

Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif

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7 January 2021

Crystal structure of a conserved ribosomal protein-RNA complex

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7 January 2021

A detailed view of a ribosomal active site: the structure of the L11-RNA complex

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7 January 2021

Structural characteristics of the stable RNA introns of archaeal hyperthermophiles and their splicing junctions.

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7 January 2021

Properties of H. volcanii tRNA intron endonuclease reveal a relationship between the archaeal and eucaryal tRNA intron processing systems

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7 January 2021

Crystal structure and evolution of a transfer RNA splicing enzyme

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7 January 2021

Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution

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7 January 2021

Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit

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7 January 2021

X-ray crystal structures of 70S ribosome functional complexes

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7 January 2021

10.1016/S0969-2126(00)00110-6

Identifiers

DOI

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29 July 2017

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