Measuring similarities between transcription factor binding sites (Q24814245)

MATCH: A tool for searching transcription factor binding sites in DNA sequences

Europe PubMed Central

title

Measuring similarities between transcription factor binding sites (English)

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author

Hanspeter Herzel

series ordinal

3

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author name string

Szymon M Kielbasa

series ordinal

1

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Didier Gonze

series ordinal

2

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language of work or name

English

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publication date

2005

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published in

BMC Bioinformatics

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volume

6

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issue

1

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page(s)

237

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cites work

1 reference

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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DNA binding sites: representation and discovery

7 April 2017

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7 April 2017

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Detection of functional DNA motifs via statistical over-representation

7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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Information content of binding sites on nucleotide sequences

7 April 2017

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28 September 2017

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Applied bioinformatics for the identification of regulatory elements

28 September 2017

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Distribution of NF-kappaB-binding sites across human chromosome 22

28 September 2017

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28 September 2017

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Computer modeling of promoter organization as a tool to study transcriptional coregulation.

28 September 2017

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Cluster-Buster: Finding dense clusters of motifs in DNA sequences.

28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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28 September 2017

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Regulatory element detection using correlation with expression.

28 September 2017

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The rat arylalkylamine N-acetyltransferase E-box: differential use in a master vs. a slave oscillator

30 May 2018

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Prediction of cis-regulatory elements of coregulated genes

30 May 2018

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Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics

28 November 2018

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28 November 2018

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28 November 2018

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28 November 2018

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28 November 2018

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28 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1261160

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28 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1261160

28 November 2018

Timing the cell cycle

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16191190

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Circadian rhythms. Liver regeneration clocks on

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16191190

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Computational identification of promoters and first exons in the human genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16191190

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-6-237

1 reference

journals/bmcbi/KielbasaGH05

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1024188046

0 references

1 reference

1 reference

PubMed publication ID

16191190

1 reference