Module 5
Module 5
Module 5
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Table 5.1: Comparison between 3D Printer and Bioprinter
Materials Plastics, metals, ceramics, Bioinks (hydrogels, extracellular matrices, cell aggregates, etc.)
resins, etc.
• Cell viability: refers to the ability of cells to remain alive and maintain their normal cellular
functions.
• Vascularization: refers to the process of creating functional blood vessel networks within
bioprinted tissues or organs.
Bioprinting Materials
• Bioprinting materials, also known as bioinks, are specifically designed to be compatible with
living cells and provide a supportive environment for their growth and organization.
• Here are some examples of commonly used bioprinting materials:
A) Hydrogels:
• Hydrogels are water-based polymer networks that closely mimic the extracellular matrix
(ECM) found in living tissues. They offer excellent biocompatibility, mechanical support, and
can be formulated to have similar physical properties to native tissues.
Examples of hydrogels used as bioinks include:
• Gelatin-based hydrogels
• Alginate hydrogels
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• Fibrin-based hydrogels
• Collagen-based hydrogels
B) Cell-laden Aggregates:
• In some cases, cells are first aggregated into biomolecules and biomaterials (or
microtissues) before being incorporated into the bioink.
• These aggregates provide a more physiological environment for the cells and enhance their
viability and functionality
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Figure 5.4: Representing extracellular matrix in relation to epithelium, endothelium and connective
tissue
• These bioinks provide control over various parameters, such as stiffness, porosity, and
degradation, to support specific tissue engineering goals.
Examples of synthetic polymer-based bioinks include:
• Polyethylene glycol (PEG)-based bioinks
• Polycaprolactone (PCL)-based bioinks
• Poly(lactic-co-glycolic acid) (PLGA)-based bioinks
E) Composite Bioinks:
• Composite bioinks combine different materials to enhance the bioink's properties, such as
mechanical strength, printability, and cell behavior.
• These bioinks often contain a combination of natural and synthetic materials or a mixture of
different biomaterials.
Examples:
• Gelatin-methacryloyl (GelMA) combined with alginate
• Collagen combined with hyaluronic acid (HA)
• Fibrin combined with nanoparticles or growth factors
Bioprinting Techniques
• Bioprinting techniques involve the precise deposition of bioinks to create three- dimensional
structures with living cells.
The Basic Steps of Bioprinting Process (General Approach):
1. Preparation of the bioink:
The bioink used in bioprinting is a mixture of cells, growth factors, and other biological materials that
are formulated to promote cell growth and tissue formation.
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2. Design of the tissue structure:
The tissue structure to be printed is designed using computer-aided design (CAD) software, which is
then used to control the movement of the bioprinter's print head.
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3. Printing:
The bioprinter dispenses the bioink in a controlled manner, layer by layer, to build up the final tissue
structure. The bioink is deposited in a manner that promotes cell survival and tissue formation.
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4. Incubation:
After printing, the tissue is incubated in a controlled environment, such as a cell culture incubator, to
promote cell growth and tissue formation.
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5. Assessment:
The printed tissue is assessed for its functional properties, such as cell viability, tissue structure, and
tissue function.
• The field of bioprinting is constantly evolving, and new techniques and materials are being
developed to improve the accuracy and reliability of bioprinted tissues and organs.
• Several techniques have been developed to accomplish this, each with its own advantages and
limitations.
• Here are some of the most commonly used bioprinting techniques:
1. Inkjet-based Bioprinting
2. Extrusion-based Bioprinting
3. Laser-assisted Bioprinting
4. Microvalve-based Bioprinting
5. Bioprinting with Solid Freeform Fabrication
1. Inkjet-based Bioprinting
• Inkjet bioprinting works similarly to standard inkjet printing.
• The bioink is loaded into cartridges, and droplets of the bioink are ejected through fine nozzles
onto a substrate.
• The droplets form layers, and the structure is built by depositing subsequent layers.
• Inkjet bioprinting allows for high-resolution printing and precise control over droplet size,
but it may be limited by the viscosity of the bioink and cell viability during the ejection process.
2. Extrusion-based Bioprinting
• Extrusion-based bioprinting uses a syringe or a similar mechanism to extrude the bioink
through a nozzle.
• The bioink is deposited layer-by-layer to create the desired structure.
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• This technique is versatile and can handle a wide range of bioinks with varying viscosities,
including those with living cells or cell aggregates.
• It allows for high cell viability and can produce structures with controlled porosity. However,
it may have limitations in achieving high resolution and complex geometries
3. Laser-assisted Bioprinting
• Laser-assisted bioprinting utilizes laser energy to precisely deposit bioinks onto a substrate.
• The bioink is placed on an energy-absorbing layer, and the laser creates a pressure wave that
propels the bioink onto the substrate in a controlled manner.
• This technique offers high resolution, precision, and the ability to print complex structures. It
can be used with delicate bioinks and allows for cell viability.
• However, laser-assisted bioprinting can be relatively slow and may have limitations in terms of
bioink viscosity
4. Microvalve-based Bioprinting
• Microvalve-based bioprinting employs microvalves to control the deposition of bioinks.
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• The bioink is pushed through microchannels, and the microvalves open and close to release
the bioink precisely.
• This technique provides control over droplet size, deposition speed, and spatial accuracy.
• It is suitable for a variety of bioink viscosities and can achieve high cell viability.
• However, the complexity of the system and the need for careful calibration can be limitations
Figure 5.9: Representing fused deposition modeling Figure 5.10: Representing steriolithography
2. 3D Printing of Ear
• 3D printing has revolutionized the field of medicine, and one of its applications is the 3D
printing of human ears.
• This process involves using a 3D printer to create an ear-shaped structure using a special
material, such as a biocompatible polymer or a hydrogel, as the "ink."
• The printed ear structure is then seeded with human cartilage cells, which grow and develop
into functional ear tissue over time
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Figure 5.11: Representing 3D printed ear
• The main advantage of 3D printing an ear is that it allows for the creation of an ear that is
custom-fitted to an individual patient, based on their specific ear shape and size.
• This can be especially useful for children with congenital ear deformities or individuals who
have suffered ear injuries or losses.Additionally, 3D printing can also be used to create ears that
are anatomically and functionally similar to a patient's normal ear, reducing the risk of
complications associated with traditionalsurgical methods.
Materials Used for 3D Printing of Human Ear:
• The material used for 3D printing of human ears can vary, depending on the specific technique
used and the desired outcome.
• Some of the most commonly used materials for 3D printing of ears include:
1. Hydrogels
2. Biocompatible polymers
3. Scaffolds
4. Cell-embedded materials
5. Ceramics
Technological Importance of 3D Printing of Human Ear:
1. Personalized ear prosthesis:
• 3D printing allows for the creation of customized ear prostheses that match the unique anatomy
of each patient.
2. Faster production and lower costs:
• Traditional methods of ear prosthesis fabrication can be time-consuming and expensive.
• 3D printing can reduce the production time and cost of ear prosthesis.
3. Biocompatibility:
• 3D printing can use biocompatible materials for the production of ear prostheses, reducing the
risk of adverse reactions and improving patient outcomes.
4. Medical education:
• 3D printing of human ears can be used to educate medical students and healthcare professionals
on the anatomy and treatment of ear defects and injuries.
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3. 3D Printing of Bone
• 3D printing has revolutionized the field of medicine, and one of its applications is the 3D
printing of bones.
• This process involves using a 3D printer to create a bone-shaped structure using a special
material, such as a biocompatible polymer or a ceramic material, as the "ink."
• The printed bone structure can then be implanted into a patient to replace missing or damaged
bone tissue.
• There are two main approaches to 3D printing of bones:
A. Additive manufacturing and
B. Scaffold-based techniques.
• Additive manufacturing involves building up the bone structure layer by layer, whereas
scaffold-based techniques involve creating a porous structure that provides a framework for
bone cells to grow and develop.
A. Additive manufacturing in 3D Printing of Bone:
• Additive manufacturing involves building up the bone structure layer by layer using
biocompatible materials.
• The layer-by-layer deposition of material enables the creation of complex three-dimensional
structures that mimic the natural bone tissue.
• The process of additive manufacturing in 3D printing of bone involves several key steps.
Steps involved in additive manufacturing of 3D Printed Bone:
1. Patient Imaging:
The process begins with obtaining accurate imaging data of the patient's bone defect or the
area requiring reconstruction. This is typically done using techniques like CT scans or MRI
scans.
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2. Digital Model Generation:
Using specialized software, the acquired imaging data is processed to create a three-dimensional
digital model of the patient's bone structure.
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3. Scaffold Design:
With the digital model in place, the next step is to design the scaffold or implant. This involves
determining the appropriate shape, size, and internal structure of the scaffold to match the
patient's anatomy and specific requirements. Software tools are used to create the design,
ensuringproper support, porosity, and structural integrity.
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4. Material Selection:
Biocompatible materials suitable for bone tissue engineering are chosen for the 3D printing
process. These materials should be capable of supporting cell attachment, growth, and eventual
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bone regeneration. Common materials include biocompatible polymers, ceramic composites, or
biodegradable materials.
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5. 3D Printing Process:
Once the scaffold design and material selection are finalized, the actual 3D printing process takes
place. The chosen technique, is used to build the scaffold layer by layer. The 3D printer precisely
deposits or fuses the chosen material, following the digital model's specifications.
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6. Post-processing:
After the 3D printing is complete, post-processing steps may be required. This can include removing
support structures, cleaning the scaffold, and performing any necessary surface treatments to
enhance biocompatibility and optimize the scaffold's properties.
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7. Sterilization:
To ensure the implant is free from contaminants and ready for clinical use, the 3D printed bone
scaffold undergoes sterilization using appropriate methods. Common techniques include
autoclaving,ethylene oxide sterilization, or gamma irradiation.
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8. Surgical Implantation:
The final step involves the surgical implantation of the 3D printed bone scaffold into the patient.
Surgeons carefully position the scaffold in the intended area, ensuring proper alignment and stability.
Over time, the scaffold provides support for bone regeneration and integrates with the surrounding
tissue.
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2. Material Selection:
Biocompatible and biodegradable materials are chosen for the fabrication of the scaffold.
Common materials include synthetic polymers, such as polycaprolactone (PCL) or poly(lactic- co-
glycolic acid) (PLGA), and natural polymers, such as collagen or gelatin.
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3. 3D Printing Process:
The 3D printing process begins by loading the selected material into the 3D printer. The printer
then deposits or solidifies the material layer by layer, following the digital design. The printing
technology can vary, including extrusion-based methods, inkjet printing, or stereolithography.
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4. Pore Formation:
During the printing process, the scaffold is designed to have a porous structure with interconnected
pores. These pores provide space for cell infiltration, nutrient supply, and vascularization. Various
techniques can be used to control the pore size, distribution, and interconnectivity.
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5. Post-Processing:
After the scaffold is printed, post-processing steps may be performed to refine the scaffold's
properties. This can include removing any support structures, sterilization, and surface treatments
toenhance biocompatibility.
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6. Cell Seeding and Culture:
Once the scaffold is prepared, it can be seeded with bone-forming cells, such as mesenchymal
stem cells (MSCs) or osteoblasts. The seeded scaffold is then cultured under appropriate
conditions to promote cell attachment, proliferation, and the formation of new bone tissue within
the scaffold.
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7. Implantation:
Once the scaffold-based construct has undergone sufficient maturation, it can be implanted into
thepatient's body. The scaffold provides structural support while the surrounding cells and blood
vessels infiltrate and replace the scaffold with newly formed bone tissue. Over time, the scaffold
degrades, leaving behind functional regenerated bone.
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2. Ceramics
3. Scaffolds
4. Cell-embedded materials
1. Biocompatible polymers:
• Biocompatible polymers are synthetic materials that are compatible with human tissues and do
not cause adverse reactions. Examples: polyethylene, polycaprolactone, polylactide, and
polyvinyl alcohol
2. Ceramics:
• Hydroxyapatite is a biocompatible material that has been shown to be an effective ceramic
material for 3D printing of bones. Examples: Hydroxyapatite, Calcium phosphate, Tricalcium
phosphate.
3. Scaffolds:
• Scaffolds are structures that provide a supportive framework for the cells to grow and
develop. In the case of 3D printing of bones, scaffolds can be used to create a specific shape
or structure for the bone tissue to grow around. Examples: Polyglycolic acid (PGA), Poly-L-
lactic acid (PLLA), Polyethylene terephthalate (PET).
4. Cell-embedded materials:
• Cell-embedded materials are materials that contain living cells, which can be used to seed the
3D printed structure. The cells then grow and develop into functional bone tissue over time.
Examples: Gelatine methacryloyl, Alginate.
4. 3D Printing of Skin
• 3D printing of skin refers to the process of creating three-dimensional human skin tissue
using a 3D printer.
• The goal of 3D printing skin is to create functional, living tissue that can be used for a variety
of purposes, such as cosmetic testing, wound healing, and drug development.
• The process involves the use of bioprinting technology, where a bioink made from living cells
and growth factors is printed in a specific pattern to create the desired tissue structure.
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2. Design of the tissue structure:
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The tissue structure to be printed is designed using computer-aided design (CAD) software, which is
then used to control the dispensing of the bioink.
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3. Printing:
The bioink is printed layer by layer using a 3D printer to create the desired tissue structure.
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4. Incubation:
After printing, the tissue is incubated in a controlled environment, such as a cell culture incubator,
to promote cell growth and tissue formation.
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5. Assessment:
The printed tissue is assessed for its functional properties, such as cell viability, tissue structure, and
tissue function
5. 3D Printed Foods
• 3D printed food refers to food items that are created using 3D printing technology.
• This technology allows for the creation of food items with intricate shapes and designs, which
can be customized based on individual preferences and dietary needs.
• The process of 3D printing food involves the use of edible materials, such as pastes, gels, and
powders, which are combined and printed layer by layer to create the final product.
• The use of 3D printing in the food industry has the potential to revolutionize the way food is
produced, as it allows for the precise control of portion sizes and ingredients, which can be
beneficial for individuals with specific dietary needs or restrictions.
• Additionally, 3D printing technology can be used to create unique and customized food
items that would be difficult to achieve using traditional cooking methods.
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2. Edible gels:
• Edible gels, such as agar and gelatin, can be used in 3D printing of food. These materials are
flexible and can be used to create 3D structures that are both aesthetically pleasing and
functional.
3. Edible powders:
• Edible powders, such as flour and sugar, can be used in 3D printing of food. These materials
can be combined with liquids to form a printable mixture that can be used to create 3D
structures
Examples of 3D Printed Food:
1. Sweet and savory snacks:
• 3D printed snacks, such as crackers, cookies, and chips, can be customized to include
intricate/complex shapes and designs.
2. Pastries:
• 3D printing technology can be used to create intricate and aesthetically pleasing pastries, such
as cakes and cupcakes.
3. Decorative garnishes:
• 3D printing technology can be used to create unique and attractive garnishes for dishes, such
as cheese and fruit designs.
The importance of 3D printing in the food industry:
• 3D printing has gained significant importance in the food industry due to its potential to
revolutionize various aspects of food production, customization, and innovation.
• Here are some key reasons why 3D printing is important in the food industry:
1. Customization and Personalization
2. Novelty and Creativity
3. Enhanced Food Safety
4. Supply Chain Efficiency
5. Sustainable Food Production
6. Food Innovation and Research
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2. Taste Receptor Cells
3. Taste Pores
4. Binding of Taste Compounds
5. Neural Signals
6. Taste Processing in the Brain
7. Taste Perception
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2. Voltammetric Sensors – Measures electric current during Redox reactions
3. Impedance Sensors - measure changes in electrical impedance caused by the interaction of
taste compounds with the sensor surface.
4. Optical Sensors - to measure changes in light absorbance or fluorescence caused by specific
taste compounds.
5. Conductometric Sensors - detect changes in electrical conductivity resulting from the
interaction of taste compounds with the sensor surface
6. Mass-Sensitive Sensors - measure changes in mass or resonance frequency caused by the
adsorption of taste compounds.
Materials Used in Electrical Tongue Technology:
• Examples of biomaterials used in Electrical Tongue technology include:
• Polymers: Polymers, such as polyvinyl alcohol (PVA) and polyethylene oxide (PEO), are often
used as the substrate or matrix material in electrical tongue sensors, as they have high
sensitivity to changes in ion concentration and are flexible.
• Metal Oxides: Metal oxides, such as tin dioxide (SnO2) and zinc oxide (ZnO), are commonly
used in electrical tongue sensors because of their high sensitivity to changes in ion
concentration and ability to undergo changes in electrical conductivity in response to
different tastes.
• Carbon Nanotubes: Carbon nanotubes are small tubes made of carbon atoms that have high
electrical conductivity and sensitivity to changes in ion concentration, making them an
attractive material for use in electrical tongue sensors.
• Dendrimers: Dendrimers are synthetic, branched nanostructures that can be functionalized
with specific receptors or enzymes to target specific tastes. They are being explored as
potential materials for use in electrical tongue sensors.
• Microfluidic Devices: Microfluidic devices, which are small devices that can manipulate
small volumes of fluid, are being used in the development of electrical tongue sensors. These
devices can be made from a variety of materials, including silicon, glass, and polymers, and
can be functionalized with specific receptors or enzymes to target specific tastes.
Advantages of Electrical Tongue Technology:
• Non-invasive: The electrical tongue is a non-invasive technology, meaning that it does not
require human taste testers. This reduces the risk of contamination and allows for the rapid
and consistent analysis of food and beverage products.
• High-throughput: The electrical tongue can analyze multiple samples in a short period of time.
• Objective analysis: The electrical tongue provides a numerical representation of the taste
and flavor of a food or beverage sample, which is less subjective than human taste testing. This
allows for the objective comparison and analysis of different products.
• Cost-effective: The electrical tongue is a relatively low-cost technology compared to other
methods of food and beverage analysis.
Limitations of Electrical Tongue Technology:
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• Limited sensory experience: The electrical tongue only measures a limited number of aspects
of taste and flavor, cannot copy natural tongue fully.
• Incomplete understanding: The technology behind the electrical tongue is still in the early
stages of development, and more research is needed.
• Interfering factors: The electrical properties of a food or beverage sample can be influenced
by factors such as temperature, humidity, and storage conditions, which can affect the
accuracy of the electrical tongue analysis.
• Calibration issues: The electrical tongue requires calibration to ensure accurate and
consistent results. Calibration procedures may be time-consuming and may need to be repeated
regularly to maintain the accuracy of the analysis.
Table 5.1: Comparison of Functioning of Human Tongue and Electronic Tongue
Sensing Taste buds on the tongue detect Electronic sensors detect chemical
Mechanism taste compounds properties or patterns
Taste Perception Humans perceive basic taste qualities: The electronic tongue can be programmed to
sweet, salty, sour, bitter, umami detect various taste qualities, but it may not
perceive tastes in the same way humans do
Sensitivity Human taste buds are sensitive to low Electronic sensors can have
concentrations of taste compounds high
sensitivity to detect minute differences in
chemical properties
Limitations Human taste perception can be influenced Electronic tongue may not fully capture the
by factors like smell, temperature, texture, complexity and nuances of human taste
and personal preferences perception
Throughput Human tasting is a relatively slow process Electronic tongue can analyze multiple
samples simultaneously, providing fast and
high-throughput analysis
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Application Human taste testing is commonly used in Electronic tongue is used in various
food and beverage industries for sensory applications, including food and beverage
evaluation analysis, quality control, and flavor profiling
and quality control
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• Carbon Nanotubes: Carbon nanotubes are small tubes made of carbon atoms that have high
electrical conductivity and sensitivity to volatile organic compounds, making them an
attractive material for use in electrical nose sensors.
• Metal Oxides: Metal oxides, such as tin oxide (SnO2) or zinc oxide (ZnO), are commonly used
in electrical nose sensors because of their high sensitivity to volatile organic compounds.
• Dendrimers: can be functionalized with specific receptors or enzymes to target specific
aroma compounds. They are being explored as potential materials for use in electrical nose
sensors.
• Microfluidic Devices: These devices can be made from a variety of materials, including
silicon, glass, and polymers, and can be functionalized with specific receptors or enzymes
to target specific aroma compounds.
Table 5.2: Comparing the functioning of human nose and electronic nose
Sensing Olfactory receptor cells in the nasal Electronic sensors detect and analyze
Mechanism cavity detect odor molecules chemical properties of odor molecules
Odor Perception Humans can perceive a wide range of Electronic nose can identify and
distinct odors differentiate various odors, but may not
perceive them in the same way as humans
Sensitivity Human sense of smell is highly sensitive Electronic sensors can have high
to trace amounts of odor molecules sensitivity to detect and quantify odor
compounds
Subjectivity Perception of odors can vary among Electronic nose provides objective
individuals due to personal measurements, eliminating subjective
preferences and experiences variations
Limitations Human perception of odors can be Electronic nose may not fully capture the
influenced by factors like adaptation, complexity and nuances of human olfaction
context, and individual differences
Throughput Human olfaction is relatively slow and Electronic nose can analyze multiple
limited in throughput samples simultaneously, providing fast and
high-throughput analysis
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Figure 5.15: Comparing the sensing process of human nose and electronic nose
Advantages of Electrical Nose in Food Science:
• Rapid Analysis: The electrical nose can provide rapid and objective analysis of food and
beverage aromas and flavors, making it an important tool for quality control and product
development.
• Non-Invasive: The electrical nose does not physically come into contact with the food or
beverage sample, making it a non-invasive method for aroma and flavor analysis.
• Objective Analysis: The electrical nose provides an objective measurement of food and
beverage aromas and flavors, reducing the potential for human error or subjective bias.
• Repeatability: The electrical nose provides consistent and repeatable results, making it a
reliable tool for product development and quality control.
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8. DNA Origami
• DNA Origami is a technique in nanotechnology that involves folding DNA molecules into
specific shapes.
• The process involves using a long, single strand of DNA, called the scaffold, to guide the
folding of short, complementary DNA strands, called staples, into a desired shape.
• The first DNA origami structures were developed in the mid-2000s and since then, the
technique has been widely used in a variety of applications, including the creation of nanoscale
structures, the study of molecular interactions, and the development of new drug delivery
systems.
Technological Importance of DNA Origami:
• The technological importance of DNA origami lies in its potential to be used in a wide range
of applications, including nanotechnology, materials science, and biomedicine.
Some of the key ways in which DNA origami can impact technology include:
Nanoscale manufacturing:
• DNA origami can be used as a template for the precise assembly of nanoscale structures,
which have applications in areas such as electronics, photonics, and materials science.
Drug delivery:
• DNA origami can be used to develop new approaches for drug delivery, as it can be designed
to carry therapeutic agents directly to specific cells or tissues.
Biosensors:
• DNA origami can be used to develop new biosensors that can detect specific biological
molecules and signals in real-time.
Biomedical imaging:
• DNA origami can be used as a tool for biomedical imaging, as it can be designed to target
specific cells or tissues and provide high-resolution images.
Gene therapy:
• DNA origami can be used as a delivery vehicle for gene therapy, as it can be programmed to
target specific cells and deliver therapeutic genes to those cells.
Biocatalysis:
• DNA origami can be used to develop new approaches for biocatalysis, as it can be designed to
perform specific chemical reactions and act as a catalyst.
Nanopatterning:
• DNA origami can be used as a tool for nanopatterning, as it can be programmed to arrange
and position nanoscale structures with precise control.
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Advantages of DNA Origami:
• Programmability: DNA origami allows for the precise and controlled folding of DNA
molecules into specific shapes, which can be programmed to fit the requirements of a particular
application.
• Versatility: DNA origami can be used to create a wide range of shapes, from simple 2D
shapes to complex 3D structures, which makes it a versatile tool for various applications.
• High precision: DNA origami is capable of creating nanoscale structures with high
precision and accuracy, which is useful for many applications in the field of nanotechnology.
• Functionality: DNA origami structures can be functionalized with additional molecules or
materials, such as proteins, nanoparticles, or other materials, which makes them useful for a
variety of applications.
• Biocompatibility: DNA is a naturally occurring molecule, which makes it biocompatible and
less likely to cause an immune response. This makes DNA origami a promising tool for
biomedical applications, such as drug delivery.
Limitations of DNA Origami:
• Complexity: Creating complex DNA origami structures can be challenging and time-
consuming, and requires specialized knowledge and expertise.
• Cost: The cost of producing and synthesizing the DNA required for DNA origami can be high,
making it an expensive technique.
• Stability: DNA origami structures are relatively fragile and can be degraded by enzymes or
other factors, which can limit their stability and shelf-life.
• Scalability: The scalability of DNA origami remains a challenge, as producing large quantities
of complex DNA origami structures is difficult and expensive.
9. Bio-computing
• Bio-computing refers to the use of biological systems, such as cells, enzymes, and DNA, for
computing and information processing.
• This field combines the principles of computer science, biology, and engineering to create
novel systems for computing and data storage.
• The technological importance of bio-computing lies in its potential to provide new and
innovative solutions for computing and information processing.
Here are some of the key ways in which bio-computing can impact technology:
• Computational power: Bio-computing systems have the potential to provide new levels of
computational power, as they can perform complex tasks and calculations using biological
processes.
• Data storage: Bio-computing systems can be used to store and process large amounts of data,
as DNA has a high information density [consider that a single gram of DNA can theoretically
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store up to 215 petabytes (1 petabyte = 1 million gigabytes) of data] and can be easily
synthesized and amplified.
• Medical applications: Bio-computing systems can be used to develop new diagnostic and
therapeutic approaches in medicine, such as biosensors and gene therapies.
• Environmental monitoring: Bio-computing systems can be used to monitor and track
environmental conditions, such as air and water quality, in real-time.
• Energy efficiency: Bio-computing systems are energy-efficient, which is becoming
increasingly important as we face the challenge of climate change and the need to reduce our
energy consumption.
• Robustness: Bio-computing systems are highly robust, as they are less susceptible to errors
and failures compared to traditional electronic systems.
• Versatility: Bio-computing systems can be programmed and reprogrammed to perform
different tasks, which makes them highly versatile and adaptable.
Advantages of Bio-computing:
• Biocompatibility: Bio-computing systems are made from biological components, which are
biocompatible and less likely to cause an immune response compared to traditional electronic
devices.
• Energy efficiency: Bio-computing systems use significantly less energy than traditional
electronic computers, as they rely on biological processes that occur naturally and do not require
external power.
• Scalability: Bio-computing systems can be easily scaled up or down, as they are based on
biological processes that can be repeated and multiplied.
• Robustness: Bio-computing systems are often more robust and reliable than traditional
electronic systems, as they are less susceptible to errors and failures.
• Flexibility: Bio-computing systems can be programmed and reprogrammed to perform
different tasks, which makes them highly flexible and adaptable
Limitations of Biocomputing:
• Speed: Bio-computing systems are generally slower than traditional electronic computers, as
they rely on biological processes that occur over time.
• Complexity: Bio-computing systems can be complex and challenging to design and build,
requiring specialized knowledge and expertise.
• Reliability: Bio-computing systems can be unreliable, as they are subject to the fluctuations
and errors inherent in biological systems.
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10. Bio-imaging for Disease diagnosis
• Bio-imaging is the use of imaging technologies to visualize biological processes and structures
in living organisms.
• It plays a crucial role in disease diagnosis by providing detailed
images of the body's internal structures and functions, and can help healthcare professionals
to identify and diagnose a wide range of diseases and conditions.
Examples of Bio-imaging Techniques:
• Some examples of bioimaging techniques used for disease diagnosis include X-rays, CT scans,
MRI, PET scans, ultrasound, and optical imaging.
• These technologies can be used to visualize a wide range of structures and functions,
including bones, tissues, organs, blood vessels, and more.
Technological Importance:
• The technological importance of bio-imaging for disease diagnosis lies in its ability to provide
detailed images of the body's internal structures and functions, which can help healthcare
professionals to make accurate diagnoses and provide effective treatments.
Some of the key technological advantages of bio-imaging include:
• Improved accuracy: Bio-imaging technologies can provide high-resolution images of the
body's internal structures, which can help healthcare professionals to identify subtle changes
and make accurate diagnoses.
• Early detection: Bio-imaging can be used to detect diseases in their early stages, when they
are often more treatable. This can lead to earlier treatment and better outcomes for patients.
• Multi-modality: Bio-imaging technologies can be combined to provide a multi-modal view of
the body's internal structures and functions, which can provide a more comprehensive
understanding of a disease or condition.
• Cost-effectiveness: Many bio-imaging technologies are relatively low-cost, which makes them
accessible to a wider range of patients.
• Minimally invasive: Many bio-imaging techniques are non-invasive, which means that they
do not require incisions or the insertion of instruments into the body. This makes them less
painful and less risky than many traditional diagnostic procedures.
• Improved patient outcomes: By providing healthcare professionals with detailed images of
the body's internal structures and functions, bio-imaging can help to improve patient outcomes
by enabling earlier and more accurate diagnoses, and more effective treatments.
• Advancements in research: Bio-imaging technologies are also important in advancing
medical research, by providing detailed images of the body's internal structures and functions,
which can help researchers to better understand the underlying mechanisms of diseases and
develop new treatments
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Table 5.3: Comparing the analyses performed by few important techniques
CT scans (computed Organs, bones, blood Detailed images, good for Exposure to radiation, not
tomography scans) vessels, tumors trauma cases suitable for some patients
MRI (Magnetic Soft tissues, organs, Excellent soft tissue Long scan times,
Resonance brain, tumors contrast restricted some
for
Imaging) patients
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• Data analysis: AI algorithms can analyze large amounts of patient data, such as electronic
health records, to identify patterns and trends that may indicate a disease. This type of data
analysis is known as predictive analytics.
• Diagnosis: AI algorithms can be used to diagnose diseases by evaluating symptoms, test
results, and other patient information. AI algorithms can help healthcare professionals make
faster and more accurate diagnoses, reducing the risk of misdiagnosis.
• Personalized medicine: AI algorithms can be used to create personalized treatment plans for
patients based on their specific medical histories, lifestyles, and other factors. For example, AI
algorithms can analyze a patient's medical history, lifestyle habits, and genetic information to
recommend the best course of treatment for their condition.
• Clinical decision support: AI algorithms can be integrated into electronic health records to
provide healthcare professionals with real-time decision-making support. For example, AI
algorithms can provide physicians with information about the best diagnostic tests to order, the
most effective treatments to consider, and the best ways to manage patient care
Limitations:
• Lack of understanding of the underlying algorithms: AI algorithms can be complex and
difficult to understand, making it difficult for healthcare professionals to interpret the results.
This can lead to confusion and mistrust of AI-based tools, particularly among healthcare
professionals who are not familiar with AI technology.
• Bias: AI algorithms may be biased, leading to inaccurate or unfair diagnoses. For example, if
an AI algorithm is trained on data from a predominantly male population, it may not accurately
diagnose conditions that affect women differently.
• Regulation: The use of AI in healthcare is heavily regulated, and it can be challenging to get
approval for new AI technologies. In many countries, AI algorithms must undergo a rigorous
evaluation process before they can be used in healthcare.
• Cost: The development and implementation of AI algorithms can be expensive, which may
limit access to these technologies for some patients and healthcare facilities. This is particularly
true in low- and middle-income countries, where access to healthcare is already limited.
• Despite these limitations, AI has the potential to revolutionize the field of disease diagnosis,
providing healthcare professionals with new and more accurate tools for identifying and
treating a wide range of conditions
• The microorganisms are activated when the concrete cracks, and they produce calcium
carbonate, which fills in the cracks and repairs the concrete. This process is known as bio-
mineralization.
27
• The benefits of self-healing bio-concrete include increased durability, reduced maintenance
costs, and improved sustainability, as the concrete is able to repair itself without the need for
human intervention.
• Additionally, because the microorganisms used in the concrete are naturally occurring and
non-toxic, self-healing bio-concrete is considered to be environmentally friendly.
• Self-healing bio-concrete is still a relatively new technology and is currently in the research
and development phase.
• However, initial studies have shown promising results and have demonstrated the potential
for self-healing bio-concrete to be a viable alternative to traditional concrete in certain
applications.
Self-healing Process:
Process Flow Chart
Mix Bacillus bacteria and calcium lactate with concrete
↓
Bacteria remain dormant (inactive) within the concrete
↓
Concrete cracks
↓
Water and oxygen enter the crack
↓
Bacteria become activated
↓
↓
Calcium carbonate fills in the cracks
↓
Concrete is repaired and structural integrity is restored
Importance:
• The Bacillus bacteria used in self-healing bioconcrete are naturally occurring and non- toxic,
so they are considered to be environmentally friendly. They are also able to survive in a wide
range of temperatures and pH levels, making them well-suited for use in concrete.
• In addition to repairing cracks, self-healing bioconcrete also has the potential to improve the
overall durability of concrete by reducing the amount of water that is able to penetrate the
surface. This can help to prevent the development of further cracks and increase the
longevity of the concrete
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Technological Importance of Self-Healing Bioconcrete:
• Increased durability: Self-healing bioconcrete has the ability to repair itself, which can help
to increase its overall durability and reduce the need for maintenance.
• Improved sustainability: By using naturally occurring and non-toxic microorganisms, self-
healing bioconcrete is considered to be a more environmentally friendly alternative to
traditional concrete.
• Reduced maintenance costs: Because self-healing bioconcrete is able to repair itself, it has
the potential to reduce the need for costly maintenance and repairs over time.
• Increased longevity: By repairing cracks and reducing the amount of water that is able to
penetrate the surface, self-healing bioconcrete can help to extend the lifespan of concrete
structures.
• New applications: The ability of self-healing bioconcrete to repair itself may open up new
applications for concrete that were not possible with traditional concrete.
• Reduced carbon footprint: The biomineralization process used in self-healing bioconcrete
has the potential to reduce the carbon footprint associated with concrete production, as it
eliminates the need for concrete to be transported and replaced when it becomes damaged.
• Biomining is often used in the extraction of metals such as copper, gold, and nickel, and has
several advantages over traditional mining methods, including lower energy costs, reduced
waste, and increased metal recovery.
Table 5.4: Comparing bioremediation via microbial surface adsorption and biomining via microbial
surface adsorption
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Aspect Bioremediation via Microbial Surface Biomining via Microbial Surface
Adsorption Adsorption
Process Microorganisms adsorb and degrade Microorganisms adsorb and extract metals
pollutants/contaminants from ores
Microorganisms Diverse range of microbial strains with Specific microbial strains with metal
pollutant-degrading capabilities adsorption capabilities
Environmental Can restore ecosystems and improve Can potentially cause some
environmental quality
Impact environmental disturbances
Timeframe for Can take months to years Quickerresults for metal extractionin
Results for significant remediation controlled conditions
Waste Generation May generate waste that requires proper Waste generation and disposal considerations
and Disposal disposal in mining operations
Considerations
Applications Soil, water, and air-pollution Mining operations for metal Extraction
remediation
The process of removing polluting heavy metals using bioremediation or biomining via microbial
surface adsorption:
1. Identification of heavy metal-contaminated site:
Identify the site or area contaminated with heavy metals, such as soil, water, or industrial waste sites.
↓
2. Isolation and characterization of metal-resistant microbial strains:
Select and isolate microbial strains that have demonstrated resistance to heavy metals. These can
include bacteria, fungi, or archaea.
↓
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3. Culturing and enrichment of microbial strains:
Culture and propagate the selected microbial strains in a suitable growth medium under laboratory
conditions. This step aims to obtain a sufficient quantity of active microbial biomass for subsequent
applications.
4. Preparation of microbial suspension:
Harvest the microbial biomass and prepare a suspension by suspending the biomass in a carrier
solution, such as water or a nutrient broth. This suspension will serve as the delivery system for the
microbes during application.
↓
5. Application of microbial suspension to the contaminated site:
Apply the microbial suspension to the heavy metal-contaminated area. This can be done through
spraying, injection, or soil/water mixing, depending on the specific site conditions.
↓
6. Microbial adsorption and sequestration of metal:
The applied microbial strains adsorb to the surfaces of metal particles or form biofilms. Through their
metabolic activity, the microbes produce extracellular compounds such as organic acids or biofilm
matrix components that have an affinity for binding metal ions.
↓
7. Separation or removal of metals from the contaminated site can be achieved through
different methods
Table 5.5: Examples of different metal-resistant microbes
Lead Pseudomonas sp.: Some strains of Pseudomonas bacteria have the ability to tolerate and
accumulate lead.
Bacillus sp.: Certain Bacillus species have been found to exhibit resistance to lead and can
effectively bind and remove it.
Saccharomyces cerevisiae: This yeast species has been shown to adsorb and immobilize lead from
aqueous solutions.
Cadmium Cupriavidus metallidurans: This bacterium is known for its high resistance to heavy metals,
including cadmium.
Trichoderma spp.: Some species of Trichoderma fungi have shown the ability to tolerate and
accumulate cadmium.
Chlorella vulgaris: This green microalga has been used for cadmium removal due to its high
metal-binding capacity.
Mercury Pseudomonas putida: Certain strains of Pseudomonas putida have the ability to tolerate and
accumulate mercury.
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Penicillium chrysogenum: Some strains of Penicillium chrysogenum fungi have shown the
capacity to bind and remove mercury.
Spirogyra sp.: This filamentous green alga has been used for mercury removal due to its ability to
accumulate and sequester mercury.
Arsenic Shewanella sp.: Certain strains of Shewanella bacteria have the ability to tolerate and accumulate
arsenic.
Aspergillus Niger: Some strains of Aspergillus niger fungi have shown the capacity to bind and
remove arsenic.
Chlorella vulgaris: This green microalga has been used for arsenic removal due to its ability to
accumulate and sequester arsenic.
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• These techniques rely on the physical properties of the biomass or biofilms,
such as size, density, or adsorption capacity, to separate them from the water or
soil.
5. Electrochemical methods:
• Electrochemical techniques, such as electrokinetic remediation or electrocoagulation, can be
utilized to remove heavy metals from the contaminated site.
• These methods involve the application of an electric field or the generation of metal precipitates
through electrochemical reactions, resulting in the migration or precipitation of metal ions, which
can then be collected and removed.