1 s2.0 S1360138515002605 Main
1 s2.0 S1360138515002605 Main
1 s2.0 S1360138515002605 Main
of food are more genetically vulnerable than ever before. The importance of diversity loss is
becoming more important today as we face the need to adapt crops to climate change [12,13]. *Correspondence:
However, there are no unanimous views on whether and where diversity has been lost [14]. [email protected] (R. Ortiz).
(E) (F)
Figure 1. (A) Diversity in cob and seeds among maize landraces. (B) Variation for seed characteristics in barley landraces.
(C) Maldandi 35-1, a popular landrace of sorghum from India. (D) ICTP 8203, an open pollen pearl millet cultivar derived from
the ‘Iniadi’ landrace. (E) Mixture of bush-type or climbing-type red mottled common bean landraces grown between or on
dry corn stalks in Colombia. (F) Tepary bean landraces from Mexico differ in leaf size and shape, or seed color ranging from
black to yellow and white.
Post-rainy sorghum [Sorghum bicolor (L.) Moench] in India is a predominant crop grown on
5.7 million ha in the Deccan Plateau of India under receding soil moisture, with highly variable
production environments and low productivity [22]. ‘M35-1’ (Figure 1C) – a selection from a local
landrace ‘Maldandi’ nearly 75 years ago – is the most popular cultivar largely because of its
earliness, high grain and stover yields, bold and lustrous grains, and drought adaptation. Several
Maldandi variants collected from farmers’ fields showed immense phenotypic variation and
molecular diversity, and such phenotypically diverse and molecularly distinct variants may
be used to enrich the Maldandi race genepool [23]. Improving grain yield but retaining grain quality
and adaptive capacity of M35-1 was the major challenge. The use of Maldandi variants in crosses
led to the development of several restorer lines (ICSR#) and cultivars (ICSV#) which, when tested
separately across six locations during the 2014 postrainy season in India, six restorer lines and
two cultivars, respectively, outyielded M35-1 (grain yield: restorer trial, 1.54 t ha 1; variety trial,
2.25 t ha 1) by 83–128% and 33–37%, with some having the same grain quality as M35-1.
‘Iniadi’ pearl millets [Pennisetum glaucum (L.) R.Br] from West Africa are widely adapted,
drought-tolerant, relatively photoperiod-insensitive, and are known for early maturity, and have
a conical head shape with large globular bluish-grey colored grains [24]. Some of the open
pollinated cultivars (OPV) bred in the 1980s are still grown on large acreages in India, for
example, ‘ICTP 8203’ [25] (Figure 1D) grown on about 0.65 million ha despite stiff competition
from hybrid cultivars [26]. The composite cultivar ‘CZP 9802’ – bred from the landrace-based
early Rajasthan population – recorded 24% and 56% higher grain and stover yields than ICTP
8203 (675 kg ha 1 and 1903 kg ha 1, respectively) in drought-prone environments [27].
Mediterranean Landraces Are the Source of Variability for Abiotic Stress Tolerance in Barley
and Wheat
The domestication of wheat and barley took place before 7000 BC in the Fertile Crescent,
which includes parts of Jordan, Lebanon, Palestine, Syria, southeastern Turkey, Iraq, and
western Iran. Evidence suggests that the most important of the early cereals was barley,
and that the first barleys were two-rowed [28]. The wild progenitor of cultivated barley, Hordeum
vulgare ssp. spontaneum, is still widely distributed along the Fertile Crescent where, particularly
in the driest areas, it can be identified within fields of cultivated barley from a distance because of
its height. It is likely that H. spontaneum contributes to the evolutionary processes of barley
landraces through continuous gene introgression [29].
The main contributions of landraces to plant breeding are useful traits for more-efficient nutrient
uptake and utilization, and genes associated with adaptation to water stress, salinity, and high
temperatures [30]. Several comparisons between barley landraces and modern cultivars have
shown that landraces consistently outyield modern cultivars under stress by as much as 20%
maximum grain yield. Furthermore, in contrast to modern cultivars, landraces rarely fail in the most
extremely stressed environments [31]. The yield advantages of landraces over modern cultivars
that were observed under stress conditions in barley cannot be necessarily extrapolated to other
crops with a different range of adaptation: for example, an environment defined as stressful for
wheat or maize may be moderately favorable for barley or sorghum. Hence, comparisons between
crops must consider carefully what is defined as a stress environment in each case.
Traits associated with grain yield under stress of landraces were early growth vigor, earliness,
growth habit, plant height under drought, long peduncle, and a short grain-filling duration [32].
When barley landraces were used in a breeding program based on direct selection in the target
environment, an interesting pattern emerged: lines derived from crosses with landraces not only
outyielded lines derived from crosses without landraces under drought conditions, but the grain
yield of lines derived from crosses with specific landrace lines, such as ‘Tadmor’, a pure line
cultivar selected from a Syrian landrace [35], was twice (1237 kg ha 1) that of lines lacking
Tadmor in their pedigree (604 kg ha 1). This result could suggest that there are blocks of genes
in chromosomal regions with a low frequency of recombination that can confer specific
adaptation to stress environments [2].
It is very likely that landraces possess useful genes for adaptation to future climates. Farmer-
based programs exploiting landrace gene pools may reconcile an increase in available and
accessible food production with an increase in agro-biodiversity [12]. The evidence in wheat also
supports the view that landraces can provide sources for increased biomass and thousand-
kernel weight, both important traits for adaptation to tolerate drought and heat stress [36]. More
recently landraces have also been acknowledged as potential sources of nutritious and healthy
food [37–40].
Particular common bean genotypes share the ability to tolerate the acid soil complex while
others adapt to high temperatures or drought. Al tolerance is found among Andean genotypes
and some lowland landraces from Brazil and Mexico [51]. Al tolerance ranges from high to
extremely low and is often worst in recently bred advanced lines selected on neutral pH soils at
centralized breeding stations. Populations generated from crosses of abiotic stress tolerant
landraces improved but abiotic stress susceptible cultivars have even been the subject of
various QTL analyses, for example, offspring with G 122 and Indeterminate Jamaica Red that are
landraces with reproductive heat-tolerance [52]. Drought adaptation, based on deep-rooted-
ness or other traits, has been found in specific Mexican landraces of the Durango–Jalisco
germplasm group, but generally breeder-selected advanced lines are used for breeding and
QTL analysis [53–56].
Upland rice is one of the major rice production systems worldwide, and drought stress during
the crop season often adversely impact on rice production. The landraces ‘Aus 257’, ‘Aus Bak
Tulsi’, ‘Azucena’, ‘Basmati 370’, ‘Dular’, ‘Kalia’, ‘Kali Aus’, ‘Lal Aus’, and ‘N22’ were the source
for grain yield under drought stress, which led to the development and release of 17 high-yielding
drought-tolerant rice cultivars in Asia and Africa. Moreover, landraces contributed 14 large-effect
QTLs associated with drought adaptation, of which six QTLs were effective in multiple genetic
backgrounds and production environments. Pyramiding of large-effect QTLs improved drought
adaptation of widely grown rice cultivars such as Swarna (India, Nepal and Bangladesh), ‘IR64’
(many countries in South and Southeast Asia), ‘Sabitri’ (Nepal), ‘TDK1’ (Laos), and ‘BR11’
(Bangladesh). Furthermore, introgressed offspring bearing SUB1 and drought-tolerant QTL
alleles on Swarna, TDK1, and IR64 backgrounds are being agronomically evaluated in some
countries in Asia [71].
Phosphorus (P) deficiency is widespread in tropical soils [72]. The rice landrace ‘Kasalath’ is
highly tolerant to P deficiency [73]. Phosphate uptake 1 (Pup1) on chromosome 12 increases
P uptake [74], which confers significant grain yield advantage in P-deficient soils. It is found in
landraces or cultivars adapted to drought-prone environments [75]. Pup1 is effective in different
genetic backgrounds and environments, and introgressed lines containing Pup1 allele signifi-
cantly increased grain yield on P-deficient soils [76]. A study on the functional mechanism
revealed the presence of a Pup1-specific protein kinase gene, named phosphorus starvation
tolerance 1 (PSTOL1), which is absent from the rice reference genome and P-starvation-
intolerant cultivars. The overexpression of POSTL1 in such cultivars significantly enhances grain
yield in P-deficient soils. POSTL1 promotes early root growth, thereby enabling plants to acquire
more P and other nutrients [77].
Salt stress adversely impact on rice productivity in rainfed and irrigated agro-ecosystems. Rice
landraces ‘Nona Bokra’ and ‘Pokkali’ are excellent source of salt tolerance. Nona Bokra
contributed major QTLs for shoot K+ concentration on chromosome 1 (qSKC-1) and for shoot
Na+ concentration on chromosome 7 (qSNC-7); qSKC-1 encodes a sodium transporter that
control K+ homeostasis under salt stress [78]. Pokali contributed another major QTL, Saltol1,
associated with Na/K ratio and salinity tolerance [79]. Further research revealed that Saltol1 is a
complex locus, with multiple Pokkali alleles regulating shoot Na+/K+ homeostasis [80]. The
Saltol1 region was recently mapped with a SNP set on chromosome 1. The SNPs associated
with Na+/K+ ratio were in complete linkage disequilibrium [81]. Another rice landrace ‘Hasawi’
contributed many QTL alleles, some with major effects associated with increased grain yield
and salinity tolerance (at reproductive stage) across different genetic backgrounds [82].
Pyramiding of Sub1 and Saltol1 is in progress to develop flood- and salinity-tolerant rice
cultivars [17]. Similarly, the barley landrace ‘TX9425’ contributed two QTLs for drought
tolerance (accounting for 42% and 14% of variation) and one QTL for salinity tolerance
(explaining 29% of variation) [83].
The discovery of abiotic stress tolerant alleles in landraces of barley, maize, rice, and wheat
clearly shows the importance of conserving and exploring landrace germplasm as a means to
identify agronomically beneficial alleles for enhancing adaptation and productivity in stress-prone
environments.
The evaluation of pure lines extracted from Syrian and Jordanian barley landraces [95] revealed a
high degree of seed dormancy and variability in the requirement for vernalization. Genetic
variation was further found for seed color (Figure 1B), growth habit, days to heading, culm length,
leaf width, awn length, early growth vigor, lodging, and powdery mildew resistance [34]. Thus,
these landraces showed adaptive traits such as vernalization and seed dormancy. They harbor
as donors, of genes which improve their performance without altering their adaptation.
How can we provide healthy food at a
price affordable to all people?
Landraces fit into the farming systems of their area of adaptation, and are often essential
components in the diet: using their genes in formal breeding programs addressing either
nutritional or adaptation issues, and maintaining them through on-farm management, is an
obligation toward the many farmers who have maintained landraces over millennia [3].
Landraces, given their more than a millennium of evolutionary history and adaptation to stressful
environments, are ideal genetic resources to explore novel genetic variation that overcomes
challenges to crop production. Landraces are heterogeneous with variable phenology, low to
moderate but stable edible yield, and are often nutritionally superior. The genebanks of the
CGIAR (Consortium of International Agricultural Research Centers) and the World Vegetable
Center hold over 791 565 cereal and legume germplasm accessions, of which about 35% are
landraces (accessed on March 6, 2015ii). Traditional agricultural production systems in the past
have played a vital role in the evolution and conservation of on-farm diversity, allowing farmers to
circumvent crop failure by reducing vulnerability to environmental stresses. A systematic
evaluation of landraces for assessing the pattern of diversity is urgently needed to identify
alleles for enhancing yield and adaptation to abiotic stress for raising the productivity of the staple
food crops in stressful environments.
Acknowledgments
S.L.D. is grateful to Ishrath Durafsha of the Knowledge Sharing and Innovation Program of ICRISAT for arranging reprints on
landrace germplasm as a valuable resource for enhancing abiotic stress adaptation and grain yield in cereal and legume
crops. We are grateful to M. Govindraj, pearl millet breeder at ICRISAT, for providing a field picture of a cultivar widely grown
in India that is derived from ‘Iniadi’ landrace pearl millet germplasm.
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