Enzyme Commission Number

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Enzyme Commission Number

The Enzyme Commission number (EC number) is a numerical classification scheme for
enzymes, based on the chemical reactions they catalyze. As a system of enzyme nomenclature,
every EC number is associated with a recommended name for the respective enzyme.

Strictly speaking, EC numbers do not specify enzymes, but enzyme-catalyzed reactions. If


different enzymes (for instance from different organisms) catalyze the same reaction, then they
receive the same EC number. Furthermore, through convergent evolution, completely different
protein folds can catalyze an identical reaction and therefore would be assigned an identical EC
number (these are called non-homologous isofunctional enzymes, or NISE). By contrast,
UniProt identifiers uniquely specify a protein by its amino acid sequence.

Format of number
Every enzyme code consists of the letters "EC" followed by four numbers separated by periods.
Those numbers represent a progressively finer classification of the enzyme. Preliminary EC
numbers exist and have an 'n' as part of the fourth (serial) digit (e.g. EC 3.5.1.n3).

For example, the tripeptide aminopeptidases have the code "EC 3.4.11.4", whose components
indicate the following groups of enzymes:

EC 3 enzymes are hydrolases (enzymes that use water to break up some other molecule)
EC 3.4 are hydrolases that act on peptide bonds
EC 3.4.11 are those hydrolases that cleave off the amino-terminal amino acid from a
polypeptide
EC 3.4.11.4 are those that cleave off the amino-terminal end from a tripeptide

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Top level codes

EC 1. Oxidoreductases
EC 1.1 Acting on the CH-OH group of donors
EC 1.2 Acting on the aldehyde or oxo group of donors
EC 1.3 Acting on the CH-CH group of donors
EC 1.4 Acting on the CH-NH2 group of donors
EC 1.5 Acting on the CH-NH group of donors
EC 1.6 Acting on NADH or NADPH
EC 1.7 Acting on other nitrogenous compounds as donors
EC 1.8 Acting on a sulfur group of donors
EC 1.9 Acting on a heme group of donors
EC 1.10 Acting on diphenols and related substances as donors
EC 1.11 Acting on a peroxide as acceptor
EC 1.12 Acting on hydrogen as donor
EC 1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
EC 1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
EC 1.15 Acting on superoxide as acceptor
EC 1.16 Oxidizing metal ions

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EC 1.17 Acting on CH or CH2 groups
EC 1.18 Acting on iron-sulfur proteins as donors
EC 1.19 Acting on reduced flavodoxin as donor
EC 1.20 Acting on phosphorus or arsenic in donors
EC 1.21 Acting on X-H and Y-H to form an X-Y bond
EC 1.97 Other oxidoreductases
EC 1.98 Enzymes using H2 as reductant
EC 1.99 Other enzymes using O2 as oxidant

EC 2. Transferases
EC 2.1 Transferring One-Carbon Groups
EC 2.2 Transferring Aldehyde or Ketonic Groups
EC 2.3 Acyltransferases
EC 2.4 Glycosyltransferases
EC 2.5 Transferring Alkyl or Aryl Groups, Other than Methyl Groups
EC 2.6 Transferring Nitrogenous Groups
EC 2.7 Transferring Phosphorus-Containing Groups
EC 2.8 Transferring Sulfur-Containing Groups
EC 2.9 Transferring Selenium-Containing Groups

EC 3. Hydrolases
EC 3.1 Acting on Ester Bonds
EC 3.2 Glycosylases
EC 3.3 Acting on Ether Bonds
EC 3.4 Acting on peptide bonds (Peptidases)
EC 3.5 Acting on Carbon-Nitrogen Bonds, other than Peptide Bonds
EC 3.6 Acting on Acid Anhydrides
EC 3.7 Acting on Carbon-Carbon Bonds
EC 3.8 Acting on Halide Bonds
EC 3.9 Acting on Phosphorus-Nitrogen Bonds
EC 3.10 Acting on Sulfur-Nitrogen Bonds
EC 3.11 Acting on Carbon-Phosphorus Bonds
EC 3.12 Acting on Sulfur-Sulfur Bonds
EC 3.13 Acting on Carbon-Sulfur Bonds

EC 4. Lyases
EC 4.1 Carbon-Carbon Lyases
EC 4.2 Carbon-Oxygen Lyases
EC 4.3 Carbon-Nitrogen Lyases
EC 4.4.4.4[1] Carbon-Sulfur Lyases
EC 4.5 Carbon-Halide Lyases
EC 4.6 Phosphorus-Oxygen Lyases
EC 4.99 Other Lyases

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EC 5. Isomerases
EC 5.1 Racemases and Epimerases
EC 5.2 cis-trans-Isomerases
EC 5.3 Intramolecular Oxidoreductases
EC 5.4 Intramolecular Transferases
EC 5.5 Intramolecular Lyases
EC 5.99 Other Isomerases

EC 6. Ligases
EC 6.1 Forming Carbon-Oxygen Bonds
EC 6.2 Forming Carbon-Sulfur Bonds
EC 6.3 Forming Carbon-Nitrogen Bonds
EC 6.4 Forming Carbon-Carbon Bonds
EC 6.5 Forming Phosphoric Ester Bonds
EC 6.6 Forming Nitrogen—Metal Bonds

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