Transcriptional trajectories of anther development provide candidates for engineering male fertility in sorghum (Q92824751)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31964983%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

title

Transcriptional trajectories of anther development provide candidates for engineering male fertility in sorghum (English)

1 reference

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1 May 2020

author name string

Namrata Dhaka

1

1 reference

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1 May 2020

Kushagra Krishnan

2

1 reference

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1 May 2020

Manu Kandpal

3

1 reference

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1 May 2020

Ira Vashisht

4

1 reference

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1 May 2020

Madan Pal

5

1 reference

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1 May 2020

Manoj Kumar Sharma

6

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1 May 2020

Rita Sharma

7

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1 May 2020

publication date

21 January 2020

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1 May 2020

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1 May 2020

volume

10

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1 May 2020

issue

1

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1 May 2020

page(s)

897

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Small RNA profiling from meiotic and post-meiotic anthers reveals prospective miRNA-target modules for engineering male fertility in sorghum

1 May 2020

cites work

1 reference

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Engineered Male Sterility by Early Anther Ablation Using the Pea Anther-Specific Promoter PsEND1

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Maize Genic Male-Sterility Genes and Their Applications in Hybrid Breeding: Progress and Perspectives

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Ethylene production and signaling in tomato (Solanum lycopersicum) pollen grains is responsive to heat stress conditions

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Abscisic acid prevents pollen abortion under high-temperature stress by mediating sugar metabolism in rice spikelets

11 February 2021

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Genome-wide analyses of late pollen-preferred genes conserved in various rice cultivars and functional identification of a gene involved in the key processes of late pollen development.

11 February 2021

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OsPKS2 is required for rice male fertility by participating in pollen wall formation

11 February 2021

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Identification of cyp703a3-3 and analysis of regulatory role of CYP703A3 in rice anther cuticle and pollen exine development

11 February 2021

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Non-coding RNAs and plant male sterility: current knowledge and future prospects

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funRiceGenes dataset for comprehensive understanding and application of rice functional genes

11 February 2021

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Monoterpenes induce the heat shock response in Arabidopsis

11 February 2021

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Molecular Control of Male Fertility for Crop Hybrid Breeding

11 February 2021

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RiceAntherNet: a gene co-expression network for identifying anther and pollen development genes.

11 February 2021

1 reference

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Proteome characterization of copper stress responses in the roots of sorghum.

11 February 2021

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HOTHEAD-Like HTH1 is Involved in Anther Cutin Biosynthesis and is Required for Pollen Fertility in Rice

11 February 2021

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The polyketide synthase OsPKS2 is essential for pollen exine and Ubisch body patterning in rice

11 February 2021

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An atypical strictosidine synthase, OsSTRL2, plays key roles in anther development and pollen wall formation in rice

11 February 2021

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Meiotic Chromosome Association 1 Interacts with TOP3α and Regulates Meiotic Recombination in Rice.

11 February 2021

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Sweet sorghum as biofuel feedstock: recent advances and available resources

11 February 2021

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Pollen Development at High Temperature: From Acclimation to Collapse.

11 February 2021

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Overexpression of OsERF48 causes regulation of OsCML16, a calmodulin-like protein gene that enhances root growth and drought tolerance

11 February 2021

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Morphological Characterization of a New and Easily Recognizable Nuclear Male Sterile Mutant of Sorghum (Sorghum bicolor).

11 February 2021

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Ectopic expression of specific GA2 oxidase mutants promotes yield and stress tolerance in rice

11 February 2021

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OsACOS12, an orthologue of Arabidopsis acyl-CoA synthetase5, plays an important role in pollen exine formation and anther development in rice

11 February 2021

1 reference

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Construction of a male sterility system for hybrid rice breeding and seed production using a nuclear male sterility gene

11 February 2021

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Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways

11 February 2021

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Targeted mutagenesis of a conserved anther-expressed P450 gene confers male sterility in monocots

11 February 2021

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Origin and Functional Prediction of Pollen Allergens in Plants

11 February 2021

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MID1 plays an important role in response to drought stress during reproductive development.

11 February 2021

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Evaluation of Sorghum [Sorghum bicolor (L.)] Reference Genes in Various Tissues and under Abiotic Stress Conditions for Quantitative Real-Time PCR Data Normalization

11 February 2021

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11 February 2021

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Defective Tapetum Cell Death 1 (DTC1) Regulates ROS Levels by Binding to Metallothionein during Tapetum Degeneration.

11 February 2021

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Temporal and spatial control of gene expression in horticultural crops

11 February 2021

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Differentially expressed seed aging responsive heat shock protein OsHSP18.2 implicates in seed vigor, longevity and improves germination and seedling establishment under abiotic stress

11 February 2021

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Two ATP Binding Cassette G Transporters, Rice ATP Binding Cassette G26 and ATP Binding Cassette G15, Collaboratively Regulate Rice Male Reproduction.

11 February 2021

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Rice MEL2, the RNA recognition motif (RRM) protein, binds in vitro to meiosis-expressed genes containing U-rich RNA consensus sequences in the 3'-UTR.

11 February 2021

1 reference

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Anther and pollen development: A conserved developmental pathway

11 February 2021

1 reference

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Loss of function of OsMADS3 via the insertion of a novel retrotransposon leads to recessive male sterility in rice (Oryza sativa).

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Elevation of Pollen Mitochondrial DNA Copy Number by WHIRLY2: Altered Respiration and Pollen Tube Growth in Arabidopsis

11 February 2021

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Evolution, functions, and mysteries of plant ARGONAUTE proteins.

11 February 2021

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XRCC3 is essential for proper double-strand break repair and homologous recombination in rice meiosis

11 February 2021

1 reference

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A decade of pollen transcriptomics.

11 February 2021

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Spatiotemporally dynamic, cell-type-dependent premeiotic and meiotic phasiRNAs in maize anthers.

11 February 2021

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

11 February 2021

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An endoplasmic reticulum magnesium transporter is essential for pollen development in Arabidopsis

11 February 2021

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Crossover formation during rice meiosis relies on interaction of OsMSH4 and OsMSH5.

11 February 2021

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UDP-arabinopyranose mutase 3 is required for pollen wall morphogenesis in rice (Oryza sativa).

11 February 2021

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Characterization of putative cis-regulatory elements in genes preferentially expressed in Arabidopsis male meiocytes.

11 February 2021

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Rice ORMDL controls sphingolipid homeostasis affecting fertility resulting from abnormal pollen development

11 February 2021

1 reference

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Rice CYP703A3, a cytochrome P450 hydroxylase, is essential for development of anther cuticle and pollen exine

11 February 2021

1 reference

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The Rice Basic Helix-Loop-Helix Transcription Factor TDR INTERACTING PROTEIN2 Is a Central Switch in Early Anther Development.

11 February 2021

1 reference

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Defining reference genes for quantitative real-time PCR analysis of anther development in rice

11 February 2021

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Impact of population structure on the apparent outcrossing rate of grain sorghum (Sorghum bicolor).

11 February 2021

1 reference

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Replication protein A2c coupled with replication protein A1c regulates crossover formation during meiosis in rice

11 February 2021

1 reference

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A role for a dioxygenase in auxin metabolism and reproductive development in rice

11 February 2021

1 reference

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Central region component1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice

11 February 2021

1 reference

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MRE11 is required for homologous synapsis and DSB processing in rice meiosis

11 February 2021

1 reference

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Role of ethylene in the control of gametophyte-sporophyte interactions in the course of the progamic phase of fertilization

11 February 2021

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The impact of environmental stress on male reproductive development in plants: biological processes and molecular mechanisms

11 February 2021

1 reference

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The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages

11 February 2021

1 reference

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AUXIN RESPONSE FACTOR17 is essential for pollen wall pattern formation in Arabidopsis.

11 February 2021

1 reference

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Regulation of stamen development by coordinated actions of jasmonate, auxin, and gibberellin in Arabidopsis.

11 February 2021

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EAT1 promotes tapetal cell death by regulating aspartic proteases during male reproductive development in rice

11 February 2021

1 reference

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The role of OsMSH5 in crossover formation during rice meiosis

11 February 2021

1 reference

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

11 February 2021

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STAR: ultrafast universal RNA-seq aligner

11 February 2021

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The role of rice HEI10 in the formation of meiotic crossovers

11 February 2021

1 reference

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The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

11 February 2021

1 reference

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Putative cis-regulatory elements in genes highly expressed in rice sperm cells

11 February 2021

1 reference

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OIP30, a RuvB-like DNA helicase 2, is a potential substrate for the pollen-predominant OsCPK25/26 in rice.

11 February 2021

1 reference

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OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis

11 February 2021

1 reference

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Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Rice MADS3 Regulates ROS Homeostasis during Late Anther Development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

A novel RNA-recognition-motif protein is required for premeiotic G1/S-phase transition in rice (Oryza sativa L.).

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

miR156-targeted and nontargeted SBP-box transcription factors act in concert to secure male fertility in Arabidopsis.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

A cis regulatory element in the TAPNAC promoter directs tapetal gene expression

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Rice expression atlas in reproductive development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Pollen-Specific Expression of Oryza sativa Indica Pollen Allergen Gene (OSIPA) Promoter in Rice and Arabidopsis Transgenic Systems

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Global Gene Profiling of Laser-Captured Pollen Mother Cells Indicates Molecular Pathways and Gene Subfamilies Involved in Rice Meiosis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Brassinosteroids control male fertility by regulating the expression of key genes involved in Arabidopsis anther and pollen development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Cytochrome P450 family member CYP704B2 catalyzes the {omega}-hydroxylation of fatty acids and is required for anther cutin biosynthesis and pollen exine formation in rice

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

OsKu70 is associated with developmental growth and genome stability in rice

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

PlnTFDB: updated content and new features of the plant transcription factor database

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Tapetum degeneration retardation is critical for aliphatic metabolism and gene regulation during rice pollen development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Mutation of the rice gene PAIR3 results in lack of bivalent formation in meiosis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Enhanced tolerance to chilling stress in OsMYB3R-2 transgenic rice is mediated by alteration in cell cycle and ectopic expression of stress genes

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Various spatiotemporal expression profiles of anther-expressed genes in rice.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Auxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongation

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Genetic evidence for three unique components in primary cell-wall cellulose synthase complexes in Arabidopsis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

OsRAD21-3, an orthologue of yeast RAD21, is required for pollen development in Oryza sativa

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

OsDMC1 is required for homologous pairing in Oryza sativa

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

High temperature stress and spikelet fertility in rice (Oryza sativa L.).

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Wax-deficient anther1 is involved in cuticle and wax production in rice anther walls and is required for pollen development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

The rice tapetum degeneration retardation gene is required for tapetum degradation and anther development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

The rice OsRad21-4, an orthologue of yeast Rec8 protein, is required for efficient meiosis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Comparative analysis of the Arabidopsis pollen transcriptome

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

AtCSLA7, a cellulose synthase-like putative glycosyltransferase, is important for pollen tube growth and embryogenesis in Arabidopsis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Male sterility in plants: occurrence, determinism, significance and use

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Isolation and characterization of two cDNA clones for mRNAs that are abundantly expressed in immature anthers of rice (Oryza sativa L.).

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6972786

Role of Lipid Metabolism in Plant Pollen Exine Development

11 February 2021

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-020-57717-0

inferred from DOI database lookup

7 January 2021

based on heuristic

Characterisation and immunolocalisation of a pollen-specific calmodulin-binding protein from rice

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-020-57717-0

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41598-020-57717-0

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31964983%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31964983%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

PubMed publication ID

31964983

1 reference