Genomic epidemiology of penicillin-non-susceptible Streptococcus pneumoniae (Q90691740)

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15 April 2020

review article

3 references

29 June 2020

10 August 2020

Genomic epidemiology of penicillin-non-susceptible Streptococcus pneumoniae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31609685%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

main subject

pneumococcal infection

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29 June 2020

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bacterial protein

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penicillin resistance

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penicillin binding proteins

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Peptidyl transferase

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Streptococcus pneumoniae

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3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31609685%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

author name string

Tamsin C M Dewé

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31609685%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Joshua C D'Aeth

series ordinal

2

1 reference

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15 April 2020

publication date

14 October 2019

1 reference

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15 April 2020

1 October 2019

2 references

29 June 2020

10 August 2020

3 references

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15 April 2020

29 June 2020

10 August 2020

5

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15 April 2020

issue

10

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Creative Commons Attribution 4.0 International

15 April 2020

copyright license

2 references

29 June 2020

Antimicrobial susceptibility testing of pneumococci: determination of Kirby-Bauer breakpoints for penicillin G, erythromycin, clindamycin, tetracycline, chloramphenicol, and rifampin

10 August 2020

cites work

1 reference

12 December 2020

Genetics of resistance to third-generation cephalosporins in clinical isolates of Streptococcus pneumoniae.

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12 December 2020

Interspecies recombinational events during the evolution of altered PBP 2x genes in penicillin-resistant clinical isolates of Streptococcus pneumoniae

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12 December 2020

Horizontal transfer of multiple penicillin-binding protein genes, and capsular biosynthetic genes, in natural populations of Streptococcus pneumoniae.

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12 December 2020

Horizontal transfer of penicillin-binding protein genes in penicillin-resistant clinical isolates of Streptococcus pneumoniae

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12 December 2020

Susceptibility of pneumococci to nine antibiotics.

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12 December 2020

Penicillin-binding proteins of multiply antibiotic-resistant South African strains of Streptococcus pneumoniae

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12 December 2020

Evolution of penicillin resistance in Streptococcus pneumoniae; the role of Streptococcus mitis in the formation of a low affinity PBP2B in S. pneumoniae

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12 December 2020

Do antimicrobials increase the carriage rate of penicillin resistant pneumococci in children? Cross sectional prevalence study

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12 December 2020

Penicillin-binding proteins 2b and 2x of Streptococcus pneumoniae are primary resistance determinants for different classes of beta-lactam antibiotics

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12 December 2020

Low dosage and long treatment duration of beta-lactam: risk factors for carriage of penicillin-resistant Streptococcus pneumoniae.

1 reference

12 December 2020

Previous antibiotic consumption and other risk factors for carriage of penicillin-resistant Streptococcus pneumoniae in children.

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12 December 2020

Measuring and interpreting associations between antibiotic use and penicillin resistance in Streptococcus pneumoniae

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12 December 2020

Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network

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12 December 2020

Alterations in MurM, a cell wall muropeptide branching enzyme, increase high-level penicillin and cephalosporin resistance in Streptococcus pneumoniae

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12 December 2020

Excessive antibiotic use for acute respiratory infections in the United States

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12 December 2020

A community intervention trial to promote judicious antibiotic use and reduce penicillin-resistant Streptococcus pneumoniae carriage in children

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12 December 2020

Effect of beta lactam antibiotic use in children on pneumococcal resistance to penicillin: prospective cohort study

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12 December 2020

The murMN operon: a functional link between antibiotic resistance and antibiotic tolerance in Streptococcuspneumoniae

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12 December 2020

Analysis of penicillin-binding protein genes of clinical isolates of Streptococcus pneumoniae with reduced susceptibility to amoxicillin.

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12 December 2020

The successful clone: the vector of dissemination of resistance in Streptococcus pneumoniae

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12 December 2020

Independent risk factors for carriage of penicillin-non-susceptible Streptococcus pneumoniae

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12 December 2020

Single-step capsular transformation and acquisition of penicillin resistance in Streptococcus pneumoniae

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12 December 2020

Impact of a conjugate vaccine on community-wide carriage of nonsusceptible Streptococcus pneumoniae in Alaska

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12 December 2020

Epidemiological differences among pneumococcal serotypes

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12 December 2020

Outpatient antibiotic use in Europe and association with resistance: a cross-national database study

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12 December 2020

Community prescribing and resistant Streptococcus pneumoniae

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12 December 2020

A longitudinal household study of Streptococcus pneumoniae nasopharyngeal carriage in a UK setting

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12 December 2020

The impact of penicillin resistance on short-term mortality in hospitalized adults with pneumococcal pneumonia: a systematic review and meta-analysis

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12 December 2020

Effect of introduction of the pneumococcal conjugate vaccine on drug-resistant Streptococcus pneumoniae

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12 December 2020

The role of antimicrobial use in the epidemiology of resistant pneumococci: A 10-year follow up

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12 December 2020

Sustained reduction of antibiotic use and low bacterial resistance: 10-year follow-up of the Swedish Strama programme

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12 December 2020

Penicillin-binding proteins and beta-lactam resistance

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12 December 2020

Rationale for revised penicillin susceptibility breakpoints versus Streptococcus pneumoniae: coping with antimicrobial susceptibility in an era of resistance

1 reference

12 December 2020

Pneumococcal serotypes and mortality following invasive pneumococcal disease: a population-based cohort study

1 reference

12 December 2020

New patterns in the otopathogens causing acute otitis media six to eight years after introduction of pneumococcal conjugate vaccine

1 reference

12 December 2020

Sustained reductions in invasive pneumococcal disease in the era of conjugate vaccine

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12 December 2020

Otitis media and its consequences: beyond the earache

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12 December 2020

Pneumococcal disease caused by serotype 19A: review of the literature and implications for future vaccine development

1 reference

12 December 2020

Rapid Pneumococcal Evolution in Response to Clinical Interventions

1 reference

12 December 2020

Compensatory Evolution of pbp Mutations Restores the Fitness Cost Imposed by β-Lactam Resistance in Streptococcus pneumoniae

1 reference

12 December 2020

Pneumococcal carriage and antibiotic resistance in young children before 13-valent conjugate vaccine

1 reference

12 December 2020

The multidrug-resistant PMEN1 pneumococcus is a paradigm for genetic success

1 reference

12 December 2020

Population genomics of post-vaccine changes in pneumococcal epidemiology.

1 reference

12 December 2020

Dense genomic sampling identifies highways of pneumococcal recombination

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12 December 2020

Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution

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12 December 2020

Evidence for soft selective sweeps in the evolution of pneumococcal multidrug resistance and vaccine escape

1 reference

12 December 2020

Variable recombination dynamics during the emergence, transmission and 'disarming' of a multidrug-resistant pneumococcal clone

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12 December 2020

Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes

1 reference

12 December 2020

Mechanism of β-lactam action in Streptococcus pneumoniae: the piperacillin paradox

1 reference

12 December 2020

Risk factors for death from invasive pneumococcal disease, Europe, 2010.

1 reference

12 December 2020

Strain features and distributions in pneumococci from children with invasive disease before and after 13-valent conjugate vaccine implementation in the USA.

1 reference

12 December 2020

Biological and Epidemiological Features of Antibiotic-Resistant Streptococcus pneumoniae in Pre- and Post-Conjugate Vaccine Eras: a United States Perspective

1 reference

12 December 2020

Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting β-Lactam Resistance Levels in Streptococcus pneumoniae

1 reference

12 December 2020

Using whole genome sequencing to identify resistance determinants and predict antimicrobial resistance phenotypes for year 2015 invasive pneumococcal disease isolates recovered in the United States

1 reference

12 December 2020

Whole genome sequencing of Streptococcus pneumoniae: development, evaluation and verification of targets for serogroup and serotype prediction using an automated pipeline

1 reference

12 December 2020

Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis

1 reference

12 December 2020

Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016.

1 reference

12 December 2020

Horizontal gene transfer and the evolution of resistance and virulence determinants in Streptococcus

1 reference

12 December 2020

Validation of β-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences

1 reference

12 December 2020

Frequency-dependent selection in vaccine-associated pneumococcal population dynamics.

1 reference

12 December 2020

SuperDCA for genome-wide epistasis analysis

1 reference

12 December 2020

SeroBA: rapid high-throughput serotyping of Streptococcus pneumoniae from whole genome sequence data

1 reference

12 December 2020

Incidence of paediatric pneumococcal meningitis and emergence of new serotypes: a time-series analysis of a 16-year French national survey

1 reference

12 December 2020

Evolution of the β-lactam-resistant Streptococcus pneumoniae PMEN3 clone over a 30 year period in Barcelona, Spain

1 reference

12 December 2020

Pneumococcal Vaccines: Host Interactions, Population Dynamics, and Design Principles

1 reference

12 December 2020

Conjugate vaccine serotypes persist as major causes of non-invasive pneumococcal pneumonia in Portugal despite declines in serotypes 3 and 19A (2012-2015)

1 reference

12 December 2020

Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in the EU and the European Economic Area in 2015: a population-level modelling analysis

1 reference

12 December 2020

Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora

1 reference

12 December 2020

Fast and flexible bacterial genomic epidemiology with PopPUNK

1 reference

12 December 2020

International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact

1 reference

12 December 2020

Persistent circulation of vaccine serotypes and serotype replacement after five years of UK infant immunisation with PCV13

1 reference

12 December 2020

Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study

1 reference

12 December 2020

Genome-wide epistasis and co-selection study using mutual information

1 reference

12 December 2020

Identifiers

DOI

10.1099/MGEN.0.000305

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31609685%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31609685%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

1 reference