Nucleotide excision repair in yeast (Q72236445)

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25 October 2019

review article

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title

Nucleotide excision repair in yeast (English)

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25 October 2019

author name string

K S Sweder

series ordinal

1

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25 October 2019

publication date

1 December 1994

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25 October 2019

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25 October 2019

volume

27

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25 October 2019

issue

1

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25 October 2019

page(s)

1-16

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The base-alteration spectrum of spontaneous and ultraviolet radiation-induced forward mutations in the URA3 locus of Saccharomyces cerevisiae.

25 October 2019

cites work

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12 December 2020

Processive action of T4 endonuclease V on ultraviolet-irradiated DNA

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12 December 2020

p44 and p34 subunits of the BTF2/TFIIH transcription factor have homologies with SSL1, a yeast protein involved in DNA repair

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12 December 2020

Promotion of specific in vitro transcription by excised "TATA" box sequences inserted in a foreign nucleotide environment

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12 December 2020

Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5' and the 6th phosphodiester bond 3' to the photodimer

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12 December 2020

Incision of ultraviolet-irradiated DNA by extracts of E. coli requires three different gene products

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12 December 2020

Yeast RAD14 and human xeroderma pigmentosum group A DNA-repair genes encode homologous proteins

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12 December 2020

The COOH terminus of suppressor of stem loop (SSL2/RAD25) in yeast is essential for overall genomic excision repair and transcription-coupled repair

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12 December 2020

The DNA helicase and adenosine triphosphatase activities of yeast Rad3 protein are inhibited by DNA damage. A potential mechanism for damage-specific recognition

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12 December 2020

Biological significance of facilitated diffusion in protein-DNA interactions. Applications to T4 endonuclease V-initiated DNA repair

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12 December 2020

A novel genetic system to detect protein-protein interactions

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12 December 2020

SSL2, a suppressor of a stem-loop mutation in the HIS4 leader encodes the yeast homolog of human ERCC-3

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12 December 2020

A transcription map of a yeast centromere plasmid: unexpected transcripts and altered gene expression

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12 December 2020

Molecular cloning of RAD16, a gene involved in differential repair in Saccharomyces cerevisiae

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12 December 2020

Active site of (A)BC excinuclease. II. Binding, bending, and catalysis mutants of UvrB reveal a direct role in 3' and an indirect role in 5' incision

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12 December 2020

Distribution and repair of photolesions in DNA: genetic consequences and the role of sequence context

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12 December 2020

Site and strand specificity of UVB mutagenesis in the SUP4-o gene of yeast

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12 December 2020

DNA strand bias in the repair of the p53 gene in normal human and xeroderma pigmentosum group C fibroblasts.

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12 December 2020

Thymine dimer formation as a probe of the path of DNA in and between nucleosomes in intact chromatin

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12 December 2020

Two genes required for cell fusion during yeast conjugation: evidence for a pheromone-induced surface protein

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12 December 2020

Identical defects in DNA repair in xeroderma pigmentosum group G and rodent ERCC group 5

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12 December 2020

Negative superhelicity promotes ATP-dependent binding of yeast RAD3 protein to ultraviolet-damaged DNA.

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12 December 2020

DNA repair and transcription: the helicase connection.

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12 December 2020

Preferential binding of the xeroderma pigmentosum group A complementing protein to damaged DNA.

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12 December 2020

Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a human homologue of yeast RAD23

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12 December 2020

UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases

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12 December 2020

The RAD24 (= Rs1) gene product of Saccharomyces cerevisiae participates in two different pathways of DNA repair.

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12 December 2020

Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene

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12 December 2020

RAD7 gene of Saccharomyces cerevisiae: transcripts, nucleotide sequence analysis, and functional relationship between the RAD7 and RAD23 gene products

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12 December 2020

Transcription-repair coupling determines the strandedness of ultraviolet mutagenesis in Escherichia coli

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12 December 2020

Molecular analysis of plasmid DNA repair within ultraviolet-irradiated Escherichia coli. I. T4 endonuclease V-initiated excision repair

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12 December 2020

Photofootprint of nucleosome core DNA in intact chromatin having different structural states

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12 December 2020

Hyper-mutation caused by the reml mutation in yeast is not dependent on error-prone or excision repair.

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12 December 2020

The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest

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12 December 2020

Correction of xeroderma pigmentosum repair defect by basal transcription factor BTF2 (TFIIH)

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12 December 2020

Complementation of the DNA repair defect in xeroderma pigmentosum group G cells by a human cDNA related to yeast RAD2

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12 December 2020

Yeast DNA repair and recombination proteins Rad1 and Rad10 constitute a single-stranded-DNA endonuclease

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12 December 2020

Solution-state structure of the Dewar pyrimidinone photoproduct of thymidylyl-(3'----5')-thymidine

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12 December 2020

Effect of a lexA41(Ts) mutation on DNA repair in recA(Def) derivatives of Escherichia coli K-12

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12 December 2020

Analysis of the rad3-101 and rad3-102 mutations of Saccharomyces cerevisiae: implications for structure/function of Rad3 protein

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12 December 2020

Dual roles of a multiprotein complex from S. cerevisiae in transcription and DNA repair

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12 December 2020

Regulation of the RAD2 gene of Saccharomyces cerevisiae

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12 December 2020

DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor

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12 December 2020

Identification of RAD16, a yeast excision repair gene homologous to the recombinational repair gene RAD54 and to the SNF2 gene involved in transcriptional activation

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12 December 2020

DNA repair genes and proteins of Saccharomyces cerevisiae

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12 December 2020

Relative induction of cyclobutane dimers and cytosine photohydrates in DNA irradiated in vitro and in vivo with ultraviolet-C and ultraviolet-B light

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12 December 2020

Repair of UV-endonuclease-susceptible sites in the 7 complementation groups of xeroderma pigmentosum a through G

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12 December 2020

Control of translation initiation in Saccharomyces cerevisiae

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12 December 2020

Defective excision of pyrimidine dimers and interstrand DNA crosslinks in rad7 and rad23 mutants of Saccharomyces cerevisiae

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12 December 2020

ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genes

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12 December 2020

Differential DNA repair in transcriptionally active and inactive proto-oncogenes: c-abl and c-mos

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12 December 2020

The cloned human DNA excision repair gene ERCC-1 fails to correct xeroderma pigmentosum complementation groups A through I

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12 December 2020

Processivity of T4 endonuclease V is sensitive to NaCl concentration

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12 December 2020

Nonrandom induction of pyrimidine-pyrimidone (6-4) photoproducts in ultraviolet-irradiated human chromatin

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12 December 2020

A new mechanism for repairing oxidative damage to DNA: (A)BC excinuclease removes AP sites and thymine glycols from DNA.

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12 December 2020

Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand

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12 December 2020

DNA.RNA helicase activity of RAD3 protein of Saccharomyces cerevisiae

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12 December 2020

Inhibition of Rad3 DNA helicase activity by DNA adducts and abasic sites: implications for the role of a DNA helicase in damage-specific incision of DNA

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12 December 2020

Failure of RNA synthesis to recover after UV irradiation: an early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosum

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12 December 2020

The DNA scanning mechanism of T4 endonuclease V. Effect of NaCl concentration on processive nicking activity

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12 December 2020

Molecular cloning and biological characterization of the human excision repair gene ERCC-3

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12 December 2020

Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe

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12 December 2020

Effects of microinjected photoreactivating enzyme on thymine dimer removal and DNA repair synthesis in normal human and xeroderma pigmentosum fibroblasts.

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12 December 2020

p53 mutations in human cancers

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12 December 2020

DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall.

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12 December 2020

Mutational analysis of the structure and function of the xeroderma pigmentosum group A complementing protein. Identification of essential domains for nuclear localization and DNA excision repair

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12 December 2020

A presumed DNA helicase encoded by ERCC-3 is involved in the human repair disorders xeroderma pigmentosum and Cockayne's syndrome

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12 December 2020

Spontaneous mitotic recombination in yeast: the hyper-recombinational rem1 mutations are alleles of the RAD3 gene

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12 December 2020

Action spectra for the induction of pyrimidine(6-4)pyrimidone photoproducts and cyclobutane pyrimidine dimers in normal human skin fibroblasts

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12 December 2020

The isolation, genetics and survival characteristics of ultraviolet light-sensitive mutants in yeast

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12 December 2020

DNA repair gene RAD3 of S. cerevisiae is essential for transcription by RNA polymerase II

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12 December 2020

Pheromone response elements are necessary and sufficient for basal and pheromone-induced transcription of the FUS1 gene of Saccharomyces cerevisiae

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12 December 2020

Incision and postincision steps of pyrimidine dimer removal in excision-defective mutants of Saccharomyces cerevisiae

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12 December 2020

Nucleotide excision repair, a tracking mechanism in search of damage

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12 December 2020

Differential repair of UV damage in rad mutants of Saccharomyces cerevisiae: a possible function of G2 arrest upon UV irradiation

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12 December 2020

RAD1, an excision repair gene of Saccharomyces cerevisiae, is also involved in recombination

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12 December 2020

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12 December 2020

Gene- and strand-specific repair in vitro: partial purification of a transcription-repair coupling factor

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12 December 2020

Transcription-repair coupling and mutation frequency decline

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12 December 2020

Preferential DNA repair of an active gene in human cells

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12 December 2020

Evolutionary conservation of excision repair in Schizosaccharomyces pombe: evidence for a family of sequences related to the Saccharomyces cerevisiae RAD2 gene

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12 December 2020

A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region

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12 December 2020

Yeast DNA recombination and repair proteins Rad1 and Rad10 constitute a complex in vivo mediated by localized hydrophobic domains

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12 December 2020

DNA strand specificity for UV-induced mutations in mammalian cells

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12 December 2020

The biology of the (6-4) photoproduct

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12 December 2020

Stable and specific association between the yeast recombination and DNA repair proteins RAD1 and RAD10 in vitro

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12 December 2020

Molecular characterization of the human excision repair gene ERCC-1: cDNA cloning and amino acid homology with the yeast DNA repair gene RAD10.

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12 December 2020

Identification and regulation of a gene required for cell fusion during mating of the yeast Saccharomyces cerevisiae

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12 December 2020

The ERCC2/DNA repair protein is associated with the class II BTF2/TFIIH transcription factor

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12 December 2020

Molecular cloning of the human DNA excision repair gene ERCC-6

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12 December 2020

DNA repair within nucleosome cores of UV-irradiated human cells

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12 December 2020

Expression cloning of a human DNA repair gene involved in xeroderma pigmentosum group C

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12 December 2020

Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP.

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12 December 2020

DNA repair in a small yeast plasmid folded into chromatin

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12 December 2020

Strand-selective repair of DNA damage in the yeast GAL7 gene requires RNA polymerase II

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12 December 2020

Characterization of molecular defects in xeroderma pigmentosum group C

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12 December 2020

DNA sequence analysis of the mutational specificity of u.v. light in the SUP4-o gene of yeast

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12 December 2020

UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes

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12 December 2020

Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection

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12 December 2020

Preferential repair of ultraviolet light-induced DNA damage in the transcribed strand of the human p53 gene

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12 December 2020

Lack of transcription-coupled repair in mammalian ribosomal RNA genes

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12 December 2020

Deficient repair of the transcribed strand of active genes in Cockayne's syndrome cells

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12 December 2020

Site-specific DNA repair at the nucleosome level in a yeast minichromosome.

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12 December 2020

RAD25 (SSL2), the yeast homolog of the human xeroderma pigmentosum group B DNA repair gene, is essential for viability

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12 December 2020

Regulated expression of the Saccharomyces cerevisiae DNA repair gene RAD7 in response to DNA damage and during sporulation

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12 December 2020

Yeast excision repair gene RAD2 encodes a single-stranded DNA endonuclease

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12 December 2020

Yeast DNA-repair gene RAD14 encodes a zinc metalloprotein with affinity for ultraviolet-damaged DNA.

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12 December 2020

A yeast excision-repair gene is inducible by DNA damaging agents

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12 December 2020

Xeroderma pigmentosum complementation group C cells remove pyrimidine dimers selectively from the transcribed strand of active genes

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12 December 2020

Escherichia coli mfd mutant deficient in "mutation frequency decline" lacks strand-specific repair: in vitro complementation with purified coupling factor

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12 December 2020

Genetic control of excision of Saccharomyces cerevisiae interstrand DNA cross-links induced by psoralen plus near-UV light

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12 December 2020

The Saccharomyces cerevisiae DNA repair gene RAD23 encodes a nuclear protein containing a ubiquitin-like domain required for biological function

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12 December 2020

Molecular models for DNA damaged by photoreaction

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12 December 2020

Nucleotide excision repair in Escherichia coli

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12 December 2020

Differential repair of UV damage in Saccharomyces cerevisiae

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12 December 2020

The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.

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12 December 2020

Active site of (A)BC excinuclease. I. Evidence for 5' incision by UvrC through a catalytic site involving Asp399, Asp438, Asp466, and His538 residues

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12 December 2020

Dual cell cycle checkpoints sensitive to chromosome replication and DNA damage in the budding yeast Saccharomyces cerevisiae

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12 December 2020

Molecular analysis of plasmid DNA repair within ultraviolet-irradiated Escherichia coli. II. UvrABC-initiated excision repair and photolyase-catalyzed dimer monomerization

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12 December 2020

Analysis of the spectrum of mutations induced by the rad3-102 mutator allele of yeast

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12 December 2020

Transcription-coupled DNA repair

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12 December 2020

Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription

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12 December 2020

Excision repair in the yeast, Saccharomyces cerevisiae

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12 December 2020

Cell-free repair of UV-damaged simian virus 40 chromosomes in human cell extracts. II. Defective DNA repair synthesis by xeroderma pigmentosum cell extracts.

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12 December 2020

Excision repair at individual bases of the Escherichia coli lacI gene: relation to mutation hot spots and transcription coupling activity

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12 December 2020

Nucleotide excision repair. II: From yeast to mammals

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12 December 2020

Sites of preferential induction of cyclobutane pyrimidine dimers in the nontranscribed strand of lacI correspond with sites of UV-induced mutation in Escherichia coli

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12 December 2020

Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II

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12 December 2020

Molecular mechanisms of pyrimidine dimer excision in Saccharomyces cerevisiae: incision of ultraviolet-irradiated deoxyribonucleic acid in vivo.

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12 December 2020

Substitution of basic amino acids within endonuclease V enhances nontarget DNA binding

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12 December 2020

Purification and characterization of the Saccharomyces cerevisiae RAD1/RAD10 endonuclease

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12 December 2020

Repair of 2 um Plasmid DNA in Saccharomyces cerevisiae

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12 December 2020

Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1

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12 December 2020

Evidence that the Rad1 and Rad10 proteins of Saccharomyces cerevisiae participate as a complex in nucleotide excision repair of UV radiation damage

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12 December 2020

Nucleotide sequence, transcript mapping, and regulation of the RAD2 gene of Saccharomyces cerevisiae

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12 December 2020

Relationships between a hyper-rec mutation (REM1) and other recombination and repair genes in yeast

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12 December 2020

Isolation and characterization of MMS-sensitive mutants of Saccharomyces cerevisiae

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12 December 2020

Molecular mechanism of transcription-repair coupling.

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12 December 2020

Localization of the nucleotide excision repair gene ERCC6 to human chromosome 10q11-q21

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12 December 2020

Identifiers

DOI

10.1007/BF00326572

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7750140%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

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