Browsing gene banks for Fe2S2 ferredoxins and structural modeling of 88 plant-type sequences: An analysis of fold and function (Q58484057)

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5 December 2019

title

Browsing gene banks for Fe2S2 ferredoxins and structural modeling of 88 plant-type sequences: an analysis of fold and function (English)

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5 December 2019

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2

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5 December 2019

Alessandro Provenzani

3

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5 December 2019

Antonio Rosato

4

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5 December 2019

Paul R Vasos

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5 December 2019

author name string

Ivano Bertini

1

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5 December 2019

language of work or name

English

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publication date

1 January 2002

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5 December 2019

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5 December 2019

volume

46

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5 December 2019

issue

1

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5 December 2019

page(s)

110-127

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Structure-function studies of [2Fe-2S] ferredoxins

5 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Amino acid residues in Anabaena ferredoxin crucial to interaction with ferredoxin-NADP+ reductase: site-directed mutagenesis and laser flash photolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Structure-function relationships in Anabaena ferredoxin: correlations between X-ray crystal structures, reduction potentials, and rate constants of electron transfer to ferredoxin:NADP+ reductase for site-specific ferredoxin mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Binding of ferredoxin to ferredoxin:NADP+ oxidoreductase: the role of carboxyl groups, electrostatic surface potential, and molecular dipole moment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Adrenodoxin: structure, stability, and electron transfer properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Comparative protein modelling by satisfaction of spatial restraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

1H AND 15N NMR Sequential Assignment, Secondary Structure, and Tertiary Fold of [2Fe-2S] Ferredoxin from Synechocystis sp. PCC 6803

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Recognition of errors in three-dimensional structures of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

MOLMOL: a program for display and analysis of macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Electrostatic contributions to the stability of halophilic proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Insights into protein adaptation to a saturated salt environment from the crystal structure of a halophilic 2Fe-2S ferredoxin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Crystal structure determination at 1.4 A resolution of ferredoxin from the green alga Chlorella fusca

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Solution structure of ferredoxin from the thermophilic cyanobacterium Synechococcus elongatus and its thermostability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Refined X-ray structures of the oxidized, at 1.3 A, and reduced, at 1.17 A, [2Fe-2S] ferredoxin from the cyanobacterium Anabaena PCC7119 show redox-linked conformational changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Structure of the [2Fe-2S] ferredoxin I from the blue-green alga Aphanothece sacrum at 2.2 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

The solution structure of parsley [2Fe-2S]ferredoxin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Structure of a thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Evaluation of comparative protein modeling by MODELLER

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Mitochondrial cytochromes c: a comparative analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

MODBASE, a database of annotated comparative protein structure models

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Protein modelling for all

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Characterization of three XylT-like [2Fe-2S] ferredoxins associated with catabolism of cresols or naphthalene: evidence for their involvement in catechol dioxygenase reactivation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Structure of the electron transfer complex between ferredoxin and ferredoxin-NADP(+) reductase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Mutations of Glu92 in ferredoxin I from spinach leaves produce proteins fully functional in electron transfer but less efficient in supporting NADP+ photoreduction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Functional diversity of PH domains: an exhaustive modelling study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Classification of protein sequences by homology modeling and quantitative analysis of electrostatic similarity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Ligand specificity of brain lipid-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Packaging of proteases and proteoglycans in the granules of mast cells and other hematopoietic cells. A cluster of histidines on mouse mast cell protease 7 regulates its binding to heparin serglycin proteoglycans

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Comparative protein structure modeling of genes and genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Comparison of the electrostatic binding sites on the surface of ferredoxin for two ferredoxin-dependent enzymes, ferredoxin-NADP(+) reductase and sulfite reductase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Identification of localized redox states in plant-type two-iron ferredoxins using the nuclear Overhauser effect

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

Individual Reduction Potentials of the Iron Ions in Fe(2)S(2) and High-Potential Fe(4)S(4) Ferredoxins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10009

21 January 2018

Identifiers

DOI

10.1002/PROT.10009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11746708%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

1 reference