Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking. (Q54515368)

30 May 2018

title

Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking. (English)

1 reference

30 May 2018

author

Keir C. Neuman

1

1 reference

30 May 2018

Steven M. Block

5

object named as

Steven M Block

1 reference

30 May 2018

Robert Landick

3

object named as

Robert Landick

1 reference

30 May 2018

Jeff Gelles

4

object named as

Jeff Gelles

1 reference

30 May 2018

author name string

Elio A Abbondanzieri

2

1 reference

30 May 2018

language of work or name

English

0 references

publication date

1 November 2003

1 reference

30 May 2018

published in

Cell

1 reference

30 May 2018

volume

115

1 reference

30 May 2018

issue

4

1 reference

30 May 2018

page(s)

437-447

1 reference

30 May 2018

Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Effects of neutral salts on RNA chain elongation and pausing by Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Conformational flexibility of bacterial RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Single-molecule study of transcriptional pausing and arrest by E. coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Cooperation between RNA polymerase molecules in transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

The many conformational states of RNA polymerase elongation complexes and their roles in the regulation of transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Yeast RNA polymerase II at 5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

The mechanism of intrinsic transcription termination.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

A structural model of transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

RNA polymerase slides home: pause and termination site recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

RNA polymerase clamps down

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Translation activates the paused transcription complex and restores transcription of the trp operon leader region

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Pausing and termination by bacteriophage T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Replication by a single DNA polymerase of a stretched single-stranded DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Protein-RNA interactions in the active center of transcription elongation complex

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Function of transcription cleavage factors GreA and GreB at a regulatory pause site

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Analysis of RNA chain elongation and termination by Saccharomyces cerevisiae RNA polymerase III.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Characterization of photodamage to Escherichia coli in optical traps.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Transcription elongation: structural basis and mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Roles of RNA:DNA hybrid stability, RNA structure, and active site conformation in pausing by human RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Promoter proximal sequences modulate RNA polymerase II elongation by a novel mechanism.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Escherichia coli deoxyribonucleic acid dependent ribonucleic acid polymerase transcriptional pause sites on SV40 DNA F1

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Antitermination by bacteriophage lambda Q protein

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

RNA polymerase mutations that impair conversion to a termination-resistant complex by Q antiterminator proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Transcription by single molecules of RNA polymerase observed by light microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Statistical kinetics of processive enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

A quantitative assessment for transcriptional pausing of DNA-dependent RNA polymerases in vitro.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

The effect of force on thermodynamics and kinetics of single molecule reactions

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

In vivo evidence for back and forth oscillations of the transcription elongation complex

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Allosteric control of RNA polymerase by a site that contacts nascent RNA hairpins

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Basic mechanisms of transcript elongation and its regulation

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Stretching DNA with optical tweezers

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Force and velocity measured for single molecules of RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Pausing of RNA polymerase during in vitro transcription of the tryptophan operon leader region

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Single-molecule studies of the effect of template tension on T7 DNA polymerase activity.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Differences in the chemical reactivity of individual molecules of an enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Tethered particle motion method for studying transcript elongation by a single RNA polymerase molecule

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Transcription against an applied force

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

A Single-Molecule Study of RNA Catalysis and Folding

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

Correlating structural dynamics and function in single ribozyme molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2803%2900845-6

7 January 2021

10.1016/S0092-8674(03)00845-6

Identifiers

DOI

1 reference

30 May 2018

1 reference

30 May 2018