Deterministic Evolutionary Trajectories Influence Primary Tumor Growth: TRACERx Renal. (Q52321032)

http://europepmc.org/abstract/PMC/5938372

2 July 2018

title

Deterministic Evolutionary Trajectories Influence Primary Tumor Growth: TRACERx Renal. (English)

1 reference

http://europepmc.org/abstract/PMC/5938372

2 July 2018

author

Javier Herrero

54

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Kevin Litchfield

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Stuart Horswell

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

José I López

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Thomas Mitchell

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Aengus Stewart

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Mickael Escudero

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Greg Elgar

32

1 reference

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10 June 2020

Lavinia Spain

40

1 reference

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10 June 2020

Eva Gronroos

42

1 reference

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10 June 2020

Nicolai Juul Birkbak

58

1 reference

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10 June 2020

Orsolya Pipek

60

1 reference

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10 June 2020

Zoltan Szallasi

64

1 reference

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10 June 2020

Peter Van Loo

67

1 reference

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10 June 2020

Charles Swanton

70

1 reference

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10 June 2020

62

Marcin Krzystanek

1 reference

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10 June 2020

37

Max Salm

1 reference

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10 June 2020

63

Istvan Csabai

1 reference

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10 June 2020

68

Peter Campbell

1 reference

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10 June 2020

1

Samra Turajlic

1 reference

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10 June 2020

6

Tim Chambers

1 reference

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10 June 2020

10

David Nicol

1 reference

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10 June 2020

11

Mark Stares

1 reference

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10 June 2020

13

Steve Hazell

1 reference

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10 June 2020

14

Ashish Chandra

1 reference

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10 June 2020

Claudia Eichler-Jonsson

17

object named as

Claudia Eichler-Jonsson

1 reference

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10 June 2020

18

Faiz Jabbar

1 reference

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10 June 2020

19

Aspasia Soultati

1 reference

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10 June 2020

20

Simon Chowdhury

1 reference

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10 June 2020

21

Sarah Rudman

1 reference

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10 June 2020

22

Joanna Lynch

1 reference

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10 June 2020

23

Archana Fernando

1 reference

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10 June 2020

24

Gordon Stamp

1 reference

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10 June 2020

33

Ben Phillimore

1 reference

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10 June 2020

38

Stefan Boeing

1 reference

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10 June 2020

39

Rosalie Fisher

1 reference

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10 June 2020

41

Carolina Navas

1 reference

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10 June 2020

43

Sebastijan Hobor

1 reference

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10 June 2020

46

Sharanpreet Lall

1 reference

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10 June 2020

47

Alexander Polson

1 reference

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10 June 2020

49

Catherine Horsfield

1 reference

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10 June 2020

50

Nicos Fotiadis

1 reference

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10 June 2020

51

Lisa Pickering

1 reference

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10 June 2020

56

Mariam Jamal-Hanjani

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

TRACERx Renal Consortium

71

object named as

TRACERx Renal Consortium

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

66

Nicholas McGranahan

1 reference

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10 June 2020

author name string

Andrew Rowan

4

1 reference

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10 June 2020

Tim O'Brien

7

1 reference

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10 June 2020

Thomas B K Watkins

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Ben Challacombe

12

1 reference

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10 June 2020

Lewis Au

16

1 reference

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10 June 2020

Emma Nye

25

1 reference

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10 June 2020

Wei Xing

27

1 reference

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10 June 2020

Jonathan C Smith

28

1 reference

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10 June 2020

Adam Huffman

30

1 reference

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10 June 2020

Nik Matthews

31

1 reference

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10 June 2020

Marta Costa

34

1 reference

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10 June 2020

Sophia Ward

36

1 reference

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10 June 2020

Sarkhara Sharma

44

1 reference

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10 June 2020

Ismaeel Aurangzeb

45

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10 June 2020

Mary Varia

48

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10 June 2020

Roland F Schwarz

52

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10 June 2020

Bruno Silva

53

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10 June 2020

Nick M Luscombe

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10 June 2020

Rachel Rosenthal

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10 June 2020

Gareth A Wilson

59

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10 June 2020

Dezso Ribli

61

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10 June 2020

Martin Gore

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10 June 2020

James Larkin

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10 June 2020

Hang Xu

2

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10 June 2020

Sharmin Begum

35

1 reference

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10 June 2020

language of work or name

English

0 references

publication date

12 April 2018

1 reference

http://europepmc.org/abstract/PMC/5938372

2 July 2018

published in

Cell

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

173

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

issue

3

1 reference

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10 June 2020

page(s)

595-610.e11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

Sarcomatoid renal cell carcinoma has a distinct molecular pathogenesis, driver mutation profile and transcriptional landscape

10 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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Genomic architecture and evolution of clear cell renal cell carcinomas defined by multiregion sequencing

3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Cooperation and antagonism among cancer genes: the renal cancer paradigm

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Integrated molecular analysis of clear-cell renal cell carcinoma

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Comprehensive molecular characterization of clear cell renal cell carcinoma

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

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3 July 2018

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3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

The effect of one additional driver mutation on tumor progression.

3 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Effects on survival of BAP1 and PBRM1 mutations in sporadic clear-cell renal-cell carcinoma: a retrospective analysis with independent validation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

The life history of 21 breast cancers

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Absolute quantification of somatic DNA alterations in human cancer

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Genetic and functional studies implicate HIF1α as a 14q kidney cancer suppressor gene

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Chromosome 14q loss defines a molecular subtype of clear-cell renal cell carcinoma associated with poor prognosis

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Active surveillance of small renal masses: progression patterns of early stage kidney cancer

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

A map of human genome variation from population-scale sequencing

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Allele-specific copy number analysis of tumors

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

BEDTools: a flexible suite of utilities for comparing genomic features

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Patterns of gene expression and copy-number alterations in von-hippel lindau disease-associated and sporadic clear cell carcinoma of the kidney

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Fast and accurate short read alignment with Burrows-Wheeler transform

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Renal cell cancer stage migration: analysis of the National Cancer Data Base

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Prediction of progression after radical nephrectomy for patients with clear cell renal cell carcinoma: a stratification tool for prospective clinical trials

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

3 July 2018

On punctuated equilibria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Tracking Cancer Evolution Reveals Constrained Routes to Metastases: TRACERx Renal.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Timing the Landmark Events in the Evolution of Clear Cell Renal Cell Cancer: TRACERx Renal.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Regional Variation of Computed Tomographic Imaging in the United States and the Risk of Nephrectomy

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Uncertainties in tumor allele frequencies limit power to infer evolutionary pressures

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

TRACERx Renal: tracking renal cancer evolution through therapy

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Modeling Renal Cell Carcinoma in Mice: Bap1 and Pbrm1 Inactivation Drive Tumor Grade

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

The Role of Cytoreductive Nephrectomy: European Association of Urology Recommendations in 2016.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Genomic Characterization of Renal Cell Carcinoma with Sarcomatoid Dedifferentiation Pinpoints Recurrent Genomic Alterations.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Stabilization of MCRS1 by BAP1 prevents chromosome instability in renal cell carcinoma

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Variation in genomic landscape of clear cell renal cell carcinoma across Europe

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Rhabdoid differentiation is associated with aggressive behavior in renal cell carcinoma: a clinicopathologic analysis of 76 cases with clinical follow-up.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

A novel prognostic model for patients with sarcomatoid renal cell carcinoma

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Parallel evolution of tumour subclones mimics diversity between tumours

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Impact of renal vein invasion and fat invasion in pT3a renal cell carcinoma

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Chromosome 9p deletions identify an aggressive phenotype of clear cell renal cell carcinoma

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Decreased expression of CXXC4 promotes a malignant phenotype in renal cell carcinoma by activating Wnt signaling.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5938372

Genetic alterations in renal cell carcinoma with rhabdoid differentiation

13 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29656894

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2018.03.043

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29656894%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

PubMed publication ID

29656894

1 reference