NMR structure of the Aquifex aeolicus tmRNA pseudoknot PK1: new insights into the recoding event of the ribosomal trans-translation (Q42078742)

16 October 2017

NMR structure of the Aquifex aeolicus tmRNA pseudoknot PK1: new insights into the recoding event of the ribosomal trans-translation (English)

1 reference

16 October 2017

Aquifex aeolicus

1 reference

Sylvie Nonin-Lecomte

1

1 reference

16 October 2017

Brice Felden

series ordinal

2

1 reference

16 October 2017

Frédéric Dardel

series ordinal

3

1 reference

16 October 2017

4 April 2006

1 reference

16 October 2017

Nucleic Acids Research

1 reference

16 October 2017

34

1 reference

16 October 2017

6

1 reference

16 October 2017

1847-1853

1 reference

tmRNA and associated ligands: a puzzling relationship.

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Crystal structure of a luteoviral RNA pseudoknot and model for a minimal ribosomal frameshifting motif

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Independent binding sites of small protein B onto transfer-messenger RNA during trans-translation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Transfer-messenger RNA unfolds as it transits the ribosome

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Dial tm for rescue: tmRNA engages ribosomes stalled on defective mRNAs

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

The tmRNA website: reductive evolution of tmRNA in plastids and other endosymbionts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

30 May 2018

NMR spectroscopy of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Visualizing tmRNA entry into a stalled ribosome

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Additional hydrogen bonds and base-pair kinetics in the symmetrical AMP-DNA aptamer complex

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

The path of messenger RNA through the ribosome

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Detection of N-H...N hydrogen bonding in RNA via scalar couplings in the absence of observable imino proton resonances

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

An NMR and mutational analysis of an RNA pseudoknot of Escherichia coli tmRNA involved in trans-translation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

New developments in structure determination of pseudoknots

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Crystal structure of a hepatitis delta virus ribozyme

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

NMR Structure of a Classical Pseudoknot: Interplay of Single- and Double-Stranded RNA

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Imino proton exchange and base-pair kinetics in the AMP-RNA aptamer complex

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Probing the structure of the Escherichia coli 10Sa RNA (tmRNA).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Phylogenetic analysis of tmRNA secondary structure.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

MOLMOL: a program for display and analysis of macromolecular structures

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Structural basis of RNA folding and recognition in an AMP-RNA aptamer complex

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Terminal Base Pairs of Oligodeoxynucleotides: Imino Proton Exchange and Fraying

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Two- and three-dimensional HCN experiments for correlating base and sugar resonances in 15N,13C-labeled RNA oligonucleotides

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Proton exchange and base-pair kinetics of poly(rA).poly(rU) and poly(rI).poly(rC).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

An RNA pseudoknot and an optimal heptameric shift site are required for highly efficient ribosomal frameshifting on a retroviral messenger RNA

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

How does tmRNA move through the ribosome?

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

Stepping Transfer Messenger RNA through the Ribosome

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1428798

1 December 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/16595798

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Three of four pseudoknots in tmRNA are interchangeable and are substitutable with single-stranded RNAs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16595798

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A single mode of DNA base-pair opening drives imino proton exchange

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16595798

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKL111

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

16595798

1 reference