DNA fingerprinting techniques for microorganisms. A proposal for classification and nomenclature (Q41273555)

29 September 2017

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title

DNA fingerprinting techniques for microorganisms. A proposal for classification and nomenclature (English)

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29 September 2017

1

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29 September 2017

publication date

1 October 1996

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29 September 2017

published in

Molecular Biotechnology

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29 September 2017

volume

6

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29 September 2017

issue

2

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29 September 2017

page(s)

115-142

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Resolution of recent evolutionary divergence among Escherichia coli from related lineages: the application of pulsed field electrophoresis to molecular epidemiology.

29 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FBF02740768

Multiply resistant Klebsiella pneumoniae strains from two Chicago hospitals: identification of the extended-spectrum TEM-12 and TEM-10 ceftazidime-hydrolyzing beta-lactamases in a single isolate

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FBF02740768

Determination of antimicrobial susceptibilities of Canadian isolates of Haemophilus influenzae and characterization of their beta-lactamases. Canadian Haemophilus Study Group

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FBF02740768

Direct, automated detection of rifampin-resistant Mycobacterium tuberculosis by polymerase chain reaction and single-strand conformation polymorphism analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FBF02740768

Classification of medically important clostridia using restriction endonuclease site differences of PCR-amplified 16S rDNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FBF02740768

Epidemiological fingerprinting of Enterobacter cloacae by small-fragment restriction endonuclease analysis and pulsed-field gel electrophoresis of genomic restriction fragments

21 January 2018

1 reference

12 December 2020

Identification of diary Propionibacterium species by rRNA gene restriction patterns.

1 reference

12 December 2020

Evaluation of the applicability of amplified rDNA-restriction analysis (ARDRA) to identification of species of the genus Corynebacterium

1 reference

12 December 2020

Increased detection of polymorphism among randomly amplified wheat DNA fragments using a modified temperature sweep gel electrophoresis (TSGE) technique

1 reference

12 December 2020

Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis

1 reference

12 December 2020

Study of the influence of plasmids on the arbitrary primer polymerase chain reaction fingerprint of Escherichia coli strains

1 reference

12 December 2020

PCR-amplified length polymorphisms in tRNA intergenic spacers for categorizing staphylococci

1 reference

12 December 2020

Genotyping of Streptococcus thermophilus evidenced by restriction analysis of ribosomal DNA

1 reference

12 December 2020

Arbitrarily primed PCR, ribotyping, and plasmid pattern analysis applied to investigation of a nosocomial outbreak due to Enterobacter cloacae in a neonatal intensive care unit.

1 reference

12 December 2020

Differentiation of Bartonella-like isolates at the species level by PCR-restriction fragment length polymorphism in the citrate synthase gene.

1 reference

12 December 2020

Inactivation of antibiotics and the dissemination of resistance genes

1 reference

12 December 2020

Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species

1 reference

12 December 2020

Automated ribosomal DNA fingerprinting by capillary electrophoresis of PCR products

1 reference

12 December 2020

Plasmid DNA fingerprinting of Acinetobacter species other than Acinetobacter baumannii.

1 reference

12 December 2020

Mixed-linker polymerase chain reaction: a new method for rapid fingerprinting of isolates of the Mycobacterium tuberculosis complex.

1 reference

12 December 2020

Arbitrarily primed PCR fingerprints resolved on SSCP gels

1 reference

12 December 2020

Molecular typing of Staphylococcus aureus on the basis of coagulase gene polymorphisms

1 reference

12 December 2020

Metastable single-strand DNA conformational polymorphism analysis results in enhanced polymorphism detection

1 reference

12 December 2020

Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction

1 reference

12 December 2020

Detection and identification of multiple mycobacterial pathogens by DNA amplification in a single tube

1 reference

12 December 2020

Genomic DNA fingerprinting by restriction fragment end labeling.

1 reference

12 December 2020

1 reference

12 December 2020

Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis

1 reference

12 December 2020

Parameters affecting the sensitivities of dideoxy fingerprinting and SSCP

1 reference

12 December 2020

Characterization of the 16S rRNA genes from Mycoplasma sp. strain F38 and development of an identification system based on PCR.

1 reference

12 December 2020

Transfer of Brevibacterium divaricatum DSM 20297T, "Brevibacterium flavum" DSM 20411, "Brevibacterium lactofermentum" DSM 20412 and DSM 1412, and Corynebacterium lilium DSM 20137T to Corynebacterium glutamicum and Their Distinction by rRNA Gene Re...

1 reference

12 December 2020

Intergenic 16S rRNA gene (rDNA)-23S rDNA sequence length polymorphisms in members of the family Legionellaceae.

1 reference

12 December 2020

Oligonucleotide (GTG)5 as a marker for Mycobacterium tuberculosis strain identification

1 reference

12 December 2020

Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology

1 reference

12 December 2020

Non-cloning amplification of specific DNA fragments from whole genomic DNA digests using DNA 'indexers'.

1 reference

12 December 2020

Amplifying DNA with arbitrary oligonucleotide primers.

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12 December 2020

PCR and single-strand conformational polymorphism for recognition of medically important opportunistic fungi.

1 reference

12 December 2020

Detection and strain identification of Actinobacillus actinomycetemcomitans by nested PCR.

1 reference

12 December 2020

Identification of microsporidia in stool specimens by using PCR and restriction endonucleases

1 reference

12 December 2020

A simple, sensitive method of analyzing bacterial ribosomal DNA polymorphism

1 reference

12 December 2020

Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannii complex by restriction analysis of the 16S-23S rRNA intergenic-spacer sequences.

1 reference

12 December 2020

Length-independent separation of DNA restriction fragments in two-dimensional gel electrophoresis

1 reference

12 December 2020

DNA polymorphisms amplified by arbitrary primers are useful as genetic markers

1 reference

12 December 2020

Detecting individual genetic variation

1 reference

12 December 2020

Rapid identification of bacteria of the Comamonadaceae with amplified ribosomal DNA-restriction analysis (ARDRA)

1 reference

12 December 2020

Automated laser fluorescence analysis of randomly amplified polymorphic DNA: a rapid method for investigating nosocomial transmission of Acinetobacter baumannii

1 reference

12 December 2020

Polyphasic taxonomy leading to the proposal of Moraxella canis sp. nov. for Moraxella catarrhalis-like strains.

1 reference

12 December 2020

A molecular technique for identification of bacteria using small subunit ribosomal RNA sequences.

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12 December 2020

Genomic fingerprinting by arbitrarily primed polymerase chain reaction resolves Borrelia burgdorferi into three distinct phyletic groups

1 reference

12 December 2020

Dideoxy fingerprinting (ddF): A rapid and efficient screen for the presence of mutations

1 reference

12 December 2020

Extended-spectrum beta-lactamase in Proteus mirabilis.

1 reference

12 December 2020

Reproducibility of random amplified polymorphic DNA (RAPD) analysis among laboratories

1 reference

12 December 2020

PCR amplification and restriction endonuclease analysis of a 65-kilodalton heat shock protein gene sequence for taxonomic separation of rapidly growing mycobacteria.

1 reference

12 December 2020

Vir typing: a long-PCR typing method for group A streptococci

1 reference

12 December 2020

Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes

1 reference

12 December 2020

PCR amplification of rRNA intergenic spacer regions as a method for epidemiologic typing of Clostridium difficile.

1 reference

12 December 2020

rRNA gene restriction patterns as taxonomic tools for the genus Aeromonas

1 reference

12 December 2020

Differentiation of Streptococcus uberis from Streptococcus parauberis by polymerase chain reaction and restriction fragment length polymorphism analysis of 16S ribosomal DNA

1 reference

12 December 2020

In vivo stability and discriminatory power of methicillin-resistant Staphylococcus aureus typing by restriction endonuclease analysis of plasmid DNA compared with those of other molecular methods

1 reference

12 December 2020

Near-field optics: imaging single molecules

1 reference

12 December 2020

Identification of Mycobacterium species by using amplified ribosomal DNA restriction analysis.

1 reference

12 December 2020

Polymerase chain reaction-mediated genotyping in microbial epidemiology

1 reference

12 December 2020

Discrimination of Mycobacterium tuberculosis strains by PCR.

1 reference

12 December 2020

Rapid characterization of Mycobacterium fortuitum-chelonei complex by restriction fragment length polymorphism of ribosomal RNA genes

1 reference

12 December 2020

Epidemiologic typing of Staphylococcus aureus by DNA restriction fragment length polymorphisms of rRNA genes: elucidation of the clonal nature of a group of bacteriophage-nontypeable, ciprofloxacin-resistant, methicillin-susceptible S. aureus isolat

1 reference

12 December 2020

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia

1 reference

12 December 2020

Stress-inducible gene of Salmonella typhimurium identified by arbitrarily primed PCR of RNA

1 reference

12 December 2020

Restriction endonuclease analysis of Eikenella corrodens

1 reference

12 December 2020

Detection and localization of single base changes by denaturing gradient gel electrophoresis

1 reference

12 December 2020

Epidemiologic typing and delineation of genetic relatedness of methicillin-resistant Staphylococcus aureus by macrorestriction analysis of genomic DNA by using pulsed-field gel electrophoresis

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12 December 2020

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12 December 2020

M13 phage DNA as a universal marker for DNA fingerprinting of animals, plants and microorganisms

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12 December 2020

Fingerprinting genomes using PCR with arbitrary primers

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12 December 2020

Genomic fingerprints produced by PCR with consensus tRNA gene primers

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12 December 2020

Comparative study of five different DNA fingerprint techniques for molecular typing of Streptococcus pneumoniae strains

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12 December 2020

Leptospira species categorized by arbitrarily primed polymerase chain reaction (PCR) and by mapped restriction polymorphisms in PCR-amplified rRNA genes

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12 December 2020

Restriction fragment length polymorphism analysis of 16S ribosomal DNA of Streptococcus and Enterococcus species of bovine origin

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12 December 2020

DNA amplification fingerprinting using very short arbitrary oligonucleotide primers

1 reference

12 December 2020

Use of low-frequency-cleavage restriction endonucleases for DNA analysis in epidemiological investigations of nosocomial bacterial infections

1 reference

12 December 2020

Secondary structure within PCR target sequences may facilitate heteroduplex production

1 reference

12 December 2020

Rapid, simple method for typing isolates of Mycobacterium tuberculosis by using the polymerase chain reaction

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12 December 2020

Multicenter evaluation of arbitrarily primed PCR for typing of Staphylococcus aureus strains

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12 December 2020

A simple and rapid electrophoresis method to detect sequence variation in PCR-amplified DNA fragments

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12 December 2020

DNA amplification and restriction endonuclease analysis for differentiation of 12 species and taxa of Nocardia, including recognition of four new taxa within the Nocardia asteroides complex

1 reference

12 December 2020

Detection of variable DNA repeats in diverse eukaryotic microorganisms by a single set of polymerase chain reaction primers

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12 December 2020

Screening for mutations by RNA single-strand conformation polymorphism (rSSCP): comparison with DNA-SSCP

1 reference

12 December 2020

Detection by PCR and differentiation by restriction fragment length polymorphism of Acholeplasma, Spiroplasma, Mycoplasma, and Ureaplasma, based upon 16S rRNA genes

1 reference

12 December 2020

DNA fingerprinting of Mycobacterium tuberculosis isolates by ligation-mediated polymerase chain reaction

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12 December 2020

Analysis of restriction-fragment patterns from complex deoxyribonucleic acid species

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12 December 2020

Insertion element IS987 from Mycobacterium bovis BCG is located in a hot-spot integration region for insertion elements in Mycobacterium tuberculosis complex strains

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12 December 2020

PCR identification of four medically important Candida species by using a single primer pair.

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12 December 2020

Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

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12 December 2020

Molecular identification of bacteria by fluorescence-based PCR-single-strand conformation polymorphism analysis of the 16S rRNA gene

1 reference

12 December 2020

Effect of PCR conditions on the formation of heteroduplex and single-stranded DNA products in the amplification of bacterial ribosomal DNA spacer regions

1 reference

12 December 2020

DNA fingerprinting of crude bacterial lysates using degenerate RAPD primers

1 reference

12 December 2020

Heterogeneity of genome sizes among natural isolates of Escherichia coli

1 reference

12 December 2020

PCR amplification of variable sequence upstream of katG gene to subdivide strains of Mycobacterium tuberculosis complex

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12 December 2020

Characterization of Acinetobacter type strains and isolates obtained from wastewater treatment plants by PCR fingerprinting.

1 reference

12 December 2020

Identification of Acinetobacter genomic species by amplified ribosomal DNA restriction analysis.

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12 December 2020

Detection and tentative identification of dominant mycoplasma species in cell cultures by restriction analysis of the 16S-23S rRNA intergenic spacer regions

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12 December 2020

Identification of mycobacteria from animals by restriction enzyme analysis and direct DNA cycle sequencing of polymerase chain reaction-amplified 16S rRNA gene sequences

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12 December 2020

Use of DNA analysis of Pasteurella haemolytica biotype T isolates to monitor transmission in bighorn sheep (Ovis canadensis canadensis)

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12 December 2020

Modeling of heteroduplex formation during PCR from mixtures of DNA templates

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12 December 2020

Identification of Azospirillum species by RFLP and pulsed-field gel electrophoresis

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12 December 2020

Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms

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12 December 2020

Detection of mutations and polymorphisms using fluorescence-based dideoxy fingerprinting (F-ddF)

1 reference

12 December 2020

DNA sequence divergence among derivatives of Escherichia coli K-12 detected by arbitrary primer PCR (random amplified polymorphic DNA) fingerprinting

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12 December 2020

Restriction fragment length polymorphisms of 16S rRNA genes in the differentiation of fast-growing mycobacterial species

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12 December 2020

Double-repetitive-element PCR method for subtyping Mycobacterium tuberculosis clinical isolates

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12 December 2020

Genomic fingerprinting by microsatellite-primed PCR: a critical evaluation

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12 December 2020

Rapid Identification of Rhizobia by Restriction Fragment Length Polymorphism Analysis of PCR-Amplified 16S rRNA Genes.

1 reference

12 December 2020

Typing of Clostridium difficile strains by PCR-amplification of variable length 16S-23S rDNA spacer regions

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12 December 2020

Detection of point mutations by SSCP of PCR-amplified DNA after endonuclease digestion

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12 December 2020

PCR analysis of alternative splicing pathways: identification of artifacts generated by heteroduplex formation

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12 December 2020

Oligonucleotide arrays: new concepts and possibilities

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12 December 2020

Rapid fingerprinting of Helicobacter pylori by polymerase chain reaction and restriction fragment length polymorphism analysis.

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12 December 2020

Ribosomal ribonucleic acid gene restriction patterns as potential taxonomic tools.

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12 December 2020

Hybridization probes for conventional DNA fingerprinting used as single primers in the polymerase chain reaction to distinguish strains of Cryptococcus neoformans

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12 December 2020

Ribotyping of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex

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12 December 2020

Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting.

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12 December 2020

Two-dimensional DNA typing: A cost-effective way of analyzing complex mixtures of DNA fragments for sequence variations

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12 December 2020

Molecular epidemiology of ampicillin-resistant clinical isolates of Salmonella enteritidis

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12 December 2020

Ligation-mediated PCR of restriction fragments from large DNA molecules

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12 December 2020

Restriction endonuclease fingerprinting (REF): a sensitive method for screening mutations in long, contiguous segments of DNA

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12 December 2020

Efficient discrimination of Mycobacterium tuberculosis strains by 16S-23S spacer region-based random amplified polymorphic DNA analysis.

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12 December 2020

Characterization of a major polymorphic tandem repeat in Mycobacterium tuberculosis and its potential use in the epidemiology of Mycobacterium kansasii and Mycobacterium gordonae

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12 December 2020

Identification of Azospirillum strains by restriction fragment length polymorphism of the 16S rDNA and of the histidine operon

1 reference

12 December 2020

Multiple replicons constituting the genome of Pseudomonas cepacia 17616

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12 December 2020

Pedigree assessment using RAPD-DGGE in cereal crop species

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12 December 2020

Discrimination of epidemic and nonepidemic methicillin-resistant Staphylococcus aureus strains on the basis of protein A gene polymorphism

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12 December 2020

Large DNA restriction fragment polymorphism in the Mycobacterium avium-M. intracellulare complex: a potential epidemiologic tool

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12 December 2020

DNA fingerprinting by arbitrarily primed PCR.

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12 December 2020

Poly(GTG)5-associated profiles of Salmonella and Shigella genomic DNA.

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12 December 2020

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

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12 December 2020

Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotyping

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12 December 2020

Long PCR-ribotyping of nontypeable Haemophilus influenzae

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12 December 2020

Compilation of small ribosomal subunit RNA sequences

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12 December 2020

Identifiers

DOI

10.1007/BF02740768

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Dimensions Publication ID

29 September 2017

1022437482

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