Neuronal regulation of alternative pre-mRNA splicing (Q36951678)

17 August 2017

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title

Neuronal regulation of alternative pre-mRNA splicing (English)

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17 August 2017

Ji-Ann Lee

2

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author name string

Qin Li

series ordinal

1

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17 August 2017

Douglas L Black

series ordinal

3

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17 August 2017

language of work or name

English

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publication date

1 November 2007

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Nature Reviews Neuroscience

17 August 2017

published in

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17 August 2017

volume

8

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17 August 2017

issue

11

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17 August 2017

page(s)

819-831

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The Polypyrimidine Tract Binding Protein Binds Upstream of Neural Cell-Specific c-src Exon N1 To Repress the Splicing of the Intron Downstream

17 August 2017

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A Complex Intronic Splicing Enhancer from the c-src Pre-mRNA Activates Inclusion of a Heterologous Exon

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hnRNP H is a component of a splicing enhancer complex that activates a c-src alternative exon in neuronal cells

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Exon recognition in vertebrate splicing

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Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

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Alternative splicing: increasing diversity in the proteomic world

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Alternative splicing in the nervous system: an emerging source of diversity and regulation

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Neuronal proteins custom designed by alternative splicing

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Understanding alternative splicing: towards a cellular code

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Regulation of alternative splicing: more than just the ABCs

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Inference of splicing regulatory activities by sequence neighborhood analysis

31 March 2020

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Intronic sequences flanking alternatively spliced exons are conserved between human and mouse

31 March 2020

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Unusual intron conservation near tissue-regulated exons found by splicing microarrays

31 March 2020

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Identification and analysis of alternative splicing events conserved in human and mouse

31 March 2020

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Profiling the array of Ca(v)3.1 variants from the human T-type calcium channel gene CACNA1G: alternative structures, developmental expression, and biophysical variations

31 March 2020

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ASAP: the Alternative Splicing Annotation Project

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Regulation of gene expression by alternative untranslated regions

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Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells

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Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes

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Otx2, Gbx2 and Fgf8 interact to position and maintain a mid-hindbrain organizer

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How does Fgf signaling from the isthmic organizer induce midbrain and cerebellum development?

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Structure and sequence of human FGF8

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Structural basis by which alternative splicing modulates the organizer activity of FGF8 in the brain

31 March 2020

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FGF8 spliceforms mediate early mesoderm and posterior neural tissue formation in Xenopus

31 March 2020

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A subset of fibroblast growth factors (Fgfs) promote survival, but Fgf-8b specifically promotes astroglial differentiation of rat cortical precursor cells

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Fibroblast growth factors and their receptors in the central nervous system

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Fox-2 mediates epithelial cell-specific fibroblast growth factor receptor 2 exon choice

31 March 2020

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31 March 2020

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Progenitor cell maintenance requires numb and numblike during mouse neurogenesis

31 March 2020

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A novel PTB-PDZ domain interaction mediates isoform-specific ubiquitylation of mammalian Numb

31 March 2020

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Asymmetric localization of Numb:EGFP in dividing neuroepithelial cells during neurulation in Danio rerio

31 March 2020

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Characterization of four mammalian numb protein isoforms. Identification of cytoplasmic and membrane-associated variants of the phosphotyrosine binding domain.

31 March 2020

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Dynamic regulation of mammalian numb by G protein-coupled receptors and protein kinase C activation: Structural determinants of numb association with the cortical membrane

31 March 2020

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A switch in numb isoforms is a critical step in cortical development.

31 March 2020

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Distinct human NUMB isoforms regulate differentiation vs. proliferation in the neuronal lineage

31 March 2020

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Distinct functions of human numb isoforms revealed by misexpression in the neural stem cell lineage in the Drosophila larval brain

31 March 2020

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Regulation of repulsion versus adhesion by different splice forms of an Eph receptor

31 March 2020

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Neural cell adhesion molecules of the immunoglobulin superfamily: role in axon growth and guidance

31 March 2020

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Got diversity? Wiring the fly brain with Dscam

31 March 2020

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Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity

31 March 2020

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Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding

31 March 2020

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Homophilic Dscam interactions control complex dendrite morphogenesis

31 March 2020

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Dendrite self-avoidance is controlled by Dscam

31 March 2020

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Drosophila sensory neurons require Dscam for dendritic self-avoidance and proper dendritic field organization

31 March 2020

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Stochastic yet biased expression of multiple Dscam splice variants by individual cells

31 March 2020

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Analysis of Dscam diversity in regulating axon guidance in Drosophila mushroom bodies

31 March 2020

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The iStem, a long-range RNA secondary structure element required for efficient exon inclusion in the Drosophila Dscam pre-mRNA.

31 March 2020

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Neuroligin expressed in nonneuronal cells triggers presynaptic development in contacting axons

31 March 2020

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Neurexins induce differentiation of GABA and glutamate postsynaptic specializations via neuroligins

31 March 2020

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Cartography of neurexins: more than 1000 isoforms generated by alternative splicing and expressed in distinct subsets of neurons

31 March 2020

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A splice code for trans-synaptic cell adhesion mediated by binding of neuroligin 1 to alpha- and beta-neurexins

31 March 2020

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Alternative splicing controls selective trans-synaptic interactions of the neuroligin-neurexin complex.

31 March 2020

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SNARE-mediated membrane fusion

31 March 2020

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Membrane fusion and exocytosis

31 March 2020

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Differential Control of the Releasable Vesicle Pools by SNAP-25 Splice Variants and SNAP-23

31 March 2020

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Differential expression of SNAP-25 protein isoforms during divergent vesicle fusion events of neural development.

31 March 2020

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Developmentally regulated switch in alternatively spliced SNAP-25 isoforms alters facilitation of synaptic transmission

31 March 2020

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The impact of splice isoforms on voltage-gated calcium channel alpha1 subunits

31 March 2020

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Cell-specific alternative splicing increases calcium channel current density in the pain pathway

31 March 2020

1 reference

Alternative splicing in the C-terminus of CaV2.2 controls expression and gating of N-type calcium channels

31 March 2020

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Alternative splicing controls G protein-dependent inhibition of N-type calcium channels in nociceptors

31 March 2020

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Kv3.4 subunits enhance the repolarizing efficiency of Kv3.1 channels in fast-spiking neurons

31 March 2020

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Mechanisms of hair cell tuning

31 March 2020

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Preferential accumulation of GABAA receptor gamma 2L, not gamma 2S, cytoplasmic loops at rat spinal cord inhibitory synapses.

31 March 2020

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GluR3 flip and flop: differences in channel opening kinetics

31 March 2020

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Reelin and ApoE receptors cooperate to enhance hippocampal synaptic plasticity and learning

31 March 2020

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Modulation of synaptic plasticity and memory by Reelin involves differential splicing of the lipoprotein receptor Apoer2

31 March 2020

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ApoE receptor 2 controls neuronal survival in the adult brain

31 March 2020

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NGF enhances depolarization effects on SNAP-25 expression: induction of SNAP-25b isoform

31 March 2020

1 reference

Ca2+ and pH modulate alternative splicing of exon 5 in NMDA receptor subunit 1.

31 March 2020

1 reference

Change in plasma membrane Ca2(+)-ATPase splice-variant expression in response to a rise in intracellular Ca2+

31 March 2020

1 reference

Dopamine and glutamate induce distinct striatal splice forms of Ania-6, an RNA polymerase II-associated cyclin

31 March 2020

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Regulation of ania-6 splice variants by distinct signaling pathways in striatal neurons

31 March 2020

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Activity-dependent regulation of alternative splicing patterns in the rat brain

31 March 2020

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Hippocampal kindling increases the expression of glutamate receptor-A Flip and -B Flip mRNA in dentate granule cells

31 March 2020

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Synaptic activity-induced conversion of intronic to exonic sequence in Homer 1 immediate early gene expression.

31 March 2020

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Increase in syntaxin 1B and glutamate release in mossy fibre terminals following induction of LTP in the dentate gyrus: a candidate molecular mechanism underlying transsynaptic plasticity

31 March 2020

1 reference

Induction of long-term potentiation in vivo regulates alternate splicing to alter syntaxin 3 isoform expression in rat dentate gyrus

31 March 2020

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Activity-dependent mRNA splicing controls ER export and synaptic delivery of NMDA receptors

31 March 2020

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Homeostatic plasticity and NMDA receptor trafficking

31 March 2020

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Homeostatic plasticity in the developing nervous system

31 March 2020

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Cell signalling and the control of pre-mRNA splicing.

31 March 2020

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Signal-dependent regulation of splicing via phosphorylation of Sam68

31 March 2020

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A conserved signal-responsive sequence mediates activation-induced alternative splicing of CD45.

31 March 2020

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A CaMK IV responsive RNA element mediates depolarization-induced alternative splicing of ion channels

31 March 2020

1 reference

A cysteine-rich motif confers hypoxia sensitivity to mammalian large conductance voltage- and Ca-activated K (BK) channel alpha-subunits

31 March 2020

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Alternative splicing of potassium channels: a dynamic switch of cellular excitability.

31 March 2020

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Control of alternative splicing of potassium channels by stress hormones.

31 March 2020

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Alternative splicing switches potassium channel sensitivity to protein phosphorylation

31 March 2020

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A consensus CaMK IV-responsive RNA sequence mediates regulation of alternative exons in neurons.

31 March 2020

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Alternatively spliced isoforms of the NMDARI receptor subunit

31 March 2020

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Splice variants of the NR1 subunit differentially induce NMDA receptor-dependent gene expression.

31 March 2020

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Splice Variant-Specific Interaction of the NMDA Receptor Subunit NR1 with Neuronal Intermediate Filaments

31 March 2020

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An NMDA receptor ER retention signal regulated by phosphorylation and alternative splicing.

31 March 2020

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PDZ Domain Suppression of an ER Retention Signal in NMDA Receptor NR1 Splice Variants

31 March 2020

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Regulation of NMDA receptor phosphorylation by alternative splicing of the C-terminal domain

31 March 2020

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Exon silencing by UAGG motifs in response to neuronal excitation

31 March 2020

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Depolarization and CaM kinase IV modulate NMDA receptor splicing through two essential RNA elements

31 March 2020

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Regulation of heterogenous nuclear ribonucleoprotein A1 transport by phosphorylation in cells stressed by osmotic shock

31 March 2020

1 reference

The MKK(3/6)-p38-signaling cascade alters the subcellular distribution of hnRNP A1 and modulates alternative splicing regulation

31 March 2020

1 reference

A combinatorial code for splicing silencing: UAGG and GGGG motifs

31 March 2020

1 reference

Role of alternative splicing in generating isoform diversity among plasma membrane calcium pumps

31 March 2020

1 reference

Multiple roles of the SR protein family in splicing regulation.

31 March 2020

1 reference

Htra2-beta 1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2)

31 March 2020

1 reference

SRp54 (SFRS11), a regulator for tau exon 10 alternative splicing identified by an expression cloning strategy

31 March 2020

1 reference

An RNA map predicting Nova-dependent splicing regulation

31 March 2020

1 reference

Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing

31 March 2020

1 reference

Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers

31 March 2020

1 reference

A vertebrate RNA-binding protein Fox-1 regulates tissue-specific splicing via the pentanucleotide GCAUG.

31 March 2020

1 reference

A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

31 March 2020

1 reference

Nova regulates brain-specific splicing to shape the synapse

31 March 2020

1 reference

Novel modes of splicing repression by PTB.

31 March 2020

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Polypyrimidine tract binding protein antagonizes exon definition

31 March 2020

1 reference

Dynamic balance between activation and repression regulates pre-mRNA alternative splicing during heart development

31 March 2020

1 reference

MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development

31 March 2020

1 reference

Comparative expression analysis of the genes encoding polypyrimidine tract binding protein (PTB) and its neural homologue (brPTB) in prenatal and postnatal mouse brain

31 March 2020

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Cooperative assembly of an hnRNP complex induced by a tissue-specific homolog of polypyrimidine tract binding protein

31 March 2020

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A brain-enriched polypyrimidine tract-binding protein antagonizes the ability of Nova to regulate neuron-specific alternative splicing

31 March 2020

1 reference

Nova, the paraneoplastic Ri antigen, is homologous to an RNA-binding protein and is specifically expressed in the developing motor system

31 March 2020

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The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia

31 March 2020

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Nova-1 regulates neuron-specific alternative splicing and is essential for neuronal viability

31 March 2020

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Common molecular pathways mediate long-term potentiation of synaptic excitation and slow synaptic inhibition.

31 March 2020

1 reference

The RNA-binding protein HuD: a regulator of neuronal differentiation, maintenance and plasticity

31 March 2020

1 reference

ELAV inhibits 3'-end processing to promote neural splicing of ewg pre-mRNA

31 March 2020

1 reference

HuD, a paraneoplastic encephalomyelitis antigen, contains RNA-binding domains and is homologous to Elav and Sex-lethal

31 March 2020

1 reference

31 March 2020

HuR and mRNA stability

1 reference

Structural basis for recognition of AU-rich element RNA by the HuD protein

31 March 2020

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A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators

31 March 2020

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RNA binding proteins and the regulation of neuronal synaptic plasticity.

31 March 2020

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The RNA-binding protein HuD regulates neuronal cell identity and maturation.

31 March 2020

1 reference

Mammalian CELF/Bruno-like RNA-binding proteins: molecular characteristics and biological functions

31 March 2020

1 reference

Identification of putative new splicing targets for ETR-3 using sequences identified by systematic evolution of ligands by exponential enrichment

31 March 2020

1 reference

CUG-BP1/CELF1 requires UGU-rich sequences for high-affinity binding

31 March 2020

1 reference

Misregulation of alternative splicing causes pathogenesis in myotonic dystrophy.

31 March 2020

1 reference

Region-specific alternative splicing in the nervous system: implications for regulation by the RNA-binding protein NAPOR.

31 March 2020

1 reference

Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing

31 March 2020

1 reference

Antagonistic regulation of alpha-actinin alternative splicing by CELF proteins and polypyrimidine tract binding protein

31 March 2020

1 reference

Two neuronal, nuclear-localized RNA binding proteins involved in synaptic transmission

31 March 2020

1 reference

X-chromosome-counting mechanisms that determine nematode sex

31 March 2020

1 reference

Transgenic alternative-splicing reporters reveal tissue-specific expression profiles and regulation mechanisms in vivo

31 March 2020

1 reference

Molecular basis of RNA recognition by the human alternative splicing factor Fox-1

31 March 2020

1 reference

Fox-2 splicing factor binds to a conserved intron motif to promote inclusion of protein 4.1R alternative exon 16.

31 March 2020

1 reference

Homologues of the Caenorhabditis elegans Fox-1 protein are neuronal splicing regulators in mammals

31 March 2020

1 reference

Role for Fox-1/Fox-2 in mediating the neuronal pathway of calcitonin/calcitonin gene-related peptide alternative RNA processing

31 March 2020

1 reference

Tissue-dependent isoforms of mammalian Fox-1 homologs are associated with tissue-specific splicing activities

31 March 2020

1 reference

Activation of c-src neuron-specific splicing by an unusual RNA element in vivo and in vitro

31 March 2020

1 reference

The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons

31 March 2020

1 reference

A novel protein with RNA-binding motifs interacts with ataxin-2

31 March 2020

1 reference

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration

31 March 2020

1 reference

Candidate-gene screening and association analysis at the autism-susceptibility locus on chromosome 16p: evidence of association at GRIN2A and ABAT

31 March 2020

1 reference

The de novo chromosome 16 translocations of two patients with abnormal phenotypes (mental retardation and epilepsy) disrupt the A2BP1 gene.

31 March 2020

1 reference

Cytogenetic and molecular characterization of A2BP1/FOX1 as a candidate gene for autism

31 March 2020

1 reference

Coordinate repression of a trio of neuron-specific splicing events by the splicing regulator PTB

31 March 2020

1 reference

Neural recognition molecules of the immunoglobulin superfamily: signaling transducers of axon guidance and neuronal migration

31 March 2020

1 reference

Src kinases: a hub for NMDA receptor regulation

31 March 2020

1 reference

The generally expressed hnRNP F is involved in a neural-specific pre-mRNA splicing event

31 March 2020

1 reference

A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer

31 March 2020

1 reference

Roles for SR proteins and hnRNP A1 in the regulation of c-src exon N1.

31 March 2020

1 reference

The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C

31 March 2020

1 reference

An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition

31 March 2020

1 reference

Polypyrimidine tract binding protein blocks the 5' splice site-dependent assembly of U2AF and the prespliceosomal E complex

31 March 2020

1 reference

Global analysis of positive and negative pre-mRNA splicing regulators in Drosophila

31 March 2020

1 reference

Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data

31 March 2020

1 reference

Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform

31 March 2020

1 reference

Detection and measurement of alternative splicing using splicing-sensitive microarrays.

31 March 2020

1 reference

ASF/SF2-regulated CaMKIIdelta alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle

31 March 2020

1 reference

Nova autoregulation reveals dual functions in neuronal splicing

31 March 2020

1 reference

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

31 March 2020

1 reference

Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay

31 March 2020

1 reference

SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs

31 March 2020

1 reference

Human tra2-beta1 autoregulates its protein concentration by influencing alternative splicing of its pre-mRNA.

31 March 2020

1 reference

The splicing factor SRp20 modifies splicing of its own mRNA and ASF/SF2 antagonizes this regulation

31 March 2020

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Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements

31 March 2020

1 reference

Regulation of alternative splicing of human tau exon 10 by phosphorylation of splicing factors

31 March 2020

1 reference

p59(fyn)-mediated phosphorylation regulates the activity of the tissue-specific splicing factor rSLM-1

31 March 2020

1 reference

Neuroligin 1: a splice site-specific ligand for beta-neurexins

31 March 2020

1 reference

Structure function and splice site analysis of the synaptogenic activity of the neurexin-1 beta LNS domain

31 March 2020

1 reference

The neuroligin and neurexin families: from structure to function at the synapse

31 March 2020

1 reference

Neuroscience. Making synapses: a balancing act.

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NRN2237

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release_fabew4hy5zhbzdi6i6da5a2ljy

17 August 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/fabew4hy5zhbzdi6i6da5a2ljy

mapped directly with Wikidata item

24 November 2022

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