Human milk metagenome: a functional capacity analysis (Q36922107)

17 August 2017

Human milk metagenome: a functional capacity analysis (English)

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17 August 2017

Tonya L Ward

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17 August 2017

Sergey Hosid

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17 August 2017

Ilya Ioshikhes

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17 August 2017

Illimar Altosaar

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17 August 2017

25 May 2013

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17 August 2017

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17 August 2017

13

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17 August 2017

116

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describes a project that uses

17 August 2017

ImageQuant

object named as

Image Quant TL

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Human milk: a source of more life than we imagine

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Shifts in human skin and nares microbiota of healthy children and adults

29 September 2017

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The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery

29 September 2017

1 reference

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Human gut microbiome viewed across age and geography

29 September 2017

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Regulatory role of suppressive motifs from commensal DNA.

29 September 2017

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The toll-like receptor 9 agonist, CpG-oligodeoxynucleotide 1826, ameliorates cardiac dysfunction after trauma-hemorrhage

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Human milk oligosaccharides promote the growth of staphylococci.

29 September 2017

1 reference

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The Impact of the Gut Microbiota on Human Health: An Integrative View

29 September 2017

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Characterization of the diversity and temporal stability of bacterial communities in human milk

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Optimal oligonucleotide sequences for TLR9 inhibitory activity in human cells: lack of correlation with TLR9 binding

29 September 2017

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Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies

29 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Human milk glycobiome and its impact on the infant gastrointestinal microbiota

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Streptococcus lactarius sp. nov., isolated from breast milk of healthy women.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Bacterial community variation in human body habitats across space and time

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Topographical and temporal diversity of the human skin microbiome

29 September 2017

1 reference

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Assessment of the bacterial diversity of breast milk of healthy women by quantitative real-time PCR.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Isolation of bifidobacteria from breast milk and assessment of the bifidobacterial population by PCR-denaturing gradient gel electrophoresis and quantitative real-time PCR

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

The development of animal models for the study of necrotizing enterocolitis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Role of human milk in extremely low birth weight infants' risk of necrotizing enterocolitis or death

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Necrotizing enterocolitis: recent scientific advances in pathophysiology and prevention

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Characterization of suppressive oligodeoxynucleotides that inhibit Toll-like receptor-9-mediated activation of innate immunity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Bacterial imprinting of the neonatal immune system: lessons from maternal cells?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Cultivation-independent assessment of the bacterial diversity of breast milk among healthy women

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Activation of toll-like receptor 9 by DNA from different bacterial species

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Repetitive elements in mammalian telomeres suppress bacterial DNA-induced immune activation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Dendritic cells shuttle microbes across gut epithelial monolayers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Human milk oligosaccharides are resistant to enzymatic hydrolysis in the upper gastrointestinal tract

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Mechanism and function of a newly identified CpG DNA motif in human primary B cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

The immune system of human milk: antimicrobial, antiinflammatory and immunomodulating properties.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Bacteriological, biochemical, and immunological modifications in human colostrum after Holder pasteurisation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Maternal weight and excessive weight gain during pregnancy modify the immunomodulatory potential of breast milk

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Sharing of bacterial strains between breast milk and infant feces.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Characterization of Immunocompetent Cells in Human Milk of Han Chinese

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Improved detection of microbial DNA after bead-beating before DNA isolation.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Preparation of genomic DNA from bacteria

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Culture-independent analysis of fecal microbiota in infants, with special reference to Bifidobacterium species

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Inhibition of Staphylococcus aureus by the commensal bacteria of human milk

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Infant growth and health outcomes associated with 3 compared with 6 mo of exclusive breastfeeding

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

The Immune System of Breast Milk: Antimicrobial and Anti-inflammatory Properties

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Near-infrared reflectance analysis to evaluate the nitrogen and fat content of human milk in neonatal intensive care units

20 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Diet- and Colonization-Dependent Intestinal Dysfunction Predisposes to Necrotizing Enterocolitis in Preterm Pigs

20 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679945

Protective effect of exclusive breastfeeding against infections during infancy: a prospective study

4 December 2018

1 reference

12 December 2020

Sorrento studies of diet and fecal flora in the newborn

1 reference

12 December 2020

Potential role of the intestinal microbiota of the mother in neonatal immune education

1 reference

12 December 2020

Inhibitory oligonucleotides specifically block effects of stimulatory CpG oligonucleotides in B cells

1 reference

12 December 2020

Alpha-lactalbumin in human milk alters the proteolytic degradation of soluble CD14 by forming a complex

1 reference

12 December 2020

Characterization ofStaphylococcus aureusstrains involved in human and bovine mastitis

1 reference

12 December 2020

Breast, milk and microbes: a complex relationship that does not end with lactation

1 reference

12 December 2020

Killing the messenger in the nick of time: persistence of breast milk sCD14 in the neonatal gastrointestinal tract

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2180-13-116

1 reference

Dimensions Publication ID

17 August 2017

0 references

1 reference

17 August 2017

PubMed publication ID

23705844

1 reference