Genome-wide analysis of DNA methylation and gene expression patterns in purified, uncultured human liver cells and activated hepatic stellate cells (Q36413597)

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English	Genome-wide analysis of DNA methylation and gene expression patterns in purified, uncultured human liver cells and activated hepatic stellate cells	scientific article

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23 February 2020

Genome-wide analysis of DNA methylation and gene expression patterns in purified, uncultured human liver cells and activated hepatic stellate cells (English)

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23 February 2020

DNA methylation

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23 February 2020

Stefaan Verhulst

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23 February 2020

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23 February 2020

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23 February 2020

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23 February 2020

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23 February 2020

Leo A van Grunsven

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23 February 2020

Adil El Taghdouini

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Adil El Taghdouini

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23 February 2020

Mustapha Najimi

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Mustapha Najimi

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23 February 2020

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Anita L Sørensen

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23 February 2020

Andrew H Reiner

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23 February 2020

Cristina I Øie

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23 February 2020

Bård Smedsrød

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23 February 2020

Philippe Collas

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23 February 2020

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1 September 2015

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23 February 2020

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23 February 2020

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23 February 2020

29

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23 February 2020

26729-26745

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23 February 2020

Integrative miRNA and Gene Expression Profiling Analysis of Human Quiescent Hepatic Stellate Cells

1 reference

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30 September 2017

High-yield and high-purity isolation of hepatic stellate cells from normal and fibrotic mouse livers

1 reference

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30 September 2017

Genomic distribution and possible functions of DNA hydroxymethylation in the brain

1 reference

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30 September 2017

Liver sinusoidal endothelial cells in hepatic fibrosis

1 reference

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30 September 2017

Mechanism and function of oxidative reversal of DNA and RNA methylation

1 reference

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30 September 2017

Enhancer RNAs and regulated transcriptional programs

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30 September 2017

Gene expression profiling of early hepatic stellate cell activation reveals a role for Igfbp3 in cell migration

1 reference

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30 September 2017

Fate tracing reveals hepatic stellate cells as dominant contributors to liver fibrosis independent of its aetiology.

1 reference

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30 September 2017

Ontogeny, distribution and potential roles of 5-hydroxymethylcytosine in human liver function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Relationship between methylome and transcriptome in patients with nonalcoholic fatty liver disease

1 reference

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30 September 2017

Cell-to-cell heterogeneity in lipid droplets suggests a mechanism to reduce lipotoxicity.

1 reference

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30 September 2017

Glia maturation factor-γ negatively modulates TLR4 signaling by facilitating TLR4 endocytic trafficking in macrophages

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30 September 2017

DNA methylation and MeCP2 regulation of PTCH1 expression during rats hepatic fibrosis

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30 September 2017

Hepatic stellate cells and portal fibroblasts are the major cellular sources of collagens and lysyl oxidases in normal liver and early after injury

1 reference

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30 September 2017

Stellate cells from rat pancreas are stem cells and can contribute to liver regeneration

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30 September 2017

The scavenger endothelial cell: a new player in homeostasis and immunity

1 reference

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30 September 2017

Epigenetics within the matrix: a neo-regulator of fibrotic disease

1 reference

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30 September 2017

DNMT1-mediated PTEN hypermethylation confers hepatic stellate cell activation and liver fibrogenesis in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Developmental features of DNA methylation during activation of the embryonic zebrafish genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Global methylation patterns in idiopathic pulmonary fibrosis

1 reference

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30 September 2017

Global analysis of DNA methylation in early-stage liver fibrosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Distinct populations of hepatic stellate cells in the mouse liver have different capacities for retinoid and lipid storage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Histone modification profiles are predictive for tissue/cell-type specific expression of both protein-coding and microRNA genes

1 reference

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30 September 2017

TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Superoxide Dismutases: Role in Redox Signaling, Vascular Function, and Diseases

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30 September 2017

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

1 reference

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30 September 2017

Remodeling and homeostasis of the extracellular matrix: implications for fibrotic diseases and cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

3D hepatic cultures simultaneously maintain primary hepatocyte and liver sinusoidal endothelial cell phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Epigenetic modifications and human disease

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30 September 2017

Comparative Epigenomic Analysis of Murine and Human Adipogenesis

1 reference

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30 September 2017

Promoter DNA methylation patterns of differentiated cells are largely programmed at the progenitor stage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Polyploidy and liver proliferation: central role of insulin signaling

1 reference

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30 September 2017

Immunoprecipitation of methylated DNA.

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30 September 2017

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

1 reference

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30 September 2017

Histone modifications at human enhancers reflect global cell-type-specific gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Hepatocellular carcinoma: management of an increasingly common problem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Sinusoidal endothelial cells prevent rat stellate cell activation and promote reversion to quiescence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Hepatic stellate cells: protean, multifunctional, and enigmatic cells of the liver

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Gene expression profiles during hepatic stellate cell activation in culture and in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Primary hepatocytes: current understanding of the regulation of metabolic enzymes and transporter proteins, and pharmaceutical practice for the use of hepatocytes in metabolism, enzyme induction, transporter, clearance, and hepatotoxicity studies.

1 reference

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30 September 2017

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Chromatin modifications and their function

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30 September 2017

Anti-adipogenic regulation underlies hepatic stellate cell transdifferentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Genomic and functional characterization of stellate cells isolated from human cirrhotic livers

1 reference

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30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Apoptosis: the nexus of liver injury and fibrosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

Structural and functional aspects of liver sinusoidal endothelial cell fenestrae: a review.

1 reference

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30 September 2017

History, heterogeneity, developmental biology, and functions of quiescent hepatic stellate cells

1 reference

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30 September 2017

The balance sheet for transcription: an analysis of nuclear RNA metabolism in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

30 September 2017

FcγRIIb on liver sinusoidal endothelium clears small immune complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

28 June 2018

MeCP2 controls the expression of RASAL1 in the hepatic fibrosis in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

28 June 2018

Epigenetic Basis for the Differentiation Potential of Mesenchymal and Embryonic Stem Cells

1 reference

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28 June 2018

Septum transversum-derived mesothelium gives rise to hepatic stellate cells and perivascular mesenchymal cells in developing mouse liver.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

28 June 2018

Retinoids, retinoid-binding proteins, and retinyl palmitate hydrolase distributions in different types of rat liver cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

28 June 2018

The Hippo pathway effector YAP controls mouse hepatic stellate cell activation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

21 September 2018

Myocardin related transcription factor A programs epigenetic activation of hepatic stellate cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

21 September 2018

Induction of LYVE-1/stabilin-2-positive liver sinusoidal endothelial-like cells from embryoid bodies by modulation of adrenomedullin-RAMP2 signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

21 September 2018

Advanced glycation end products induce production of reactive oxygen species via the activation of NADPH oxidase in murine hepatic stellate cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4694948

21 September 2018

Chronic administration of valproic acid inhibits activation of mouse hepatic stellate cells in vitro and in vivo

1 reference

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21 September 2018

Efficient differentiation of hepatocytes from human embryonic stem cells exhibiting markers recapitulating liver development in vivo.

1 reference

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21 September 2018

Regulation of myofibroblast transdifferentiation by DNA methylation and MeCP2: implications for wound healing and fibrogenesis

1 reference

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21 September 2018

Rat liver sinusoidal endothelial cell phenotype is maintained by paracrine and autocrine regulation

1 reference

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21 September 2018

DNA Methylation and Cancer

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5 December 2018

Expression of large tenascin-C splice variants by hepatic stellate cells/myofibroblasts in chronic hepatitis C

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptome analysis of human hepatic and pancreatic stellate cells: organ-specific variations of a common transcriptional phenotype

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional profiling reveals novel markers of liver fibrogenesis: gremlin and insulin-like growth factor-binding proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maintaining hepatocyte differentiation in vitro through co-culture with hepatic stellate cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kupffer cells are activated in cirrhotic portal hypertension and not normalised by TIPS

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adult-Derived Human Liver Mesenchymal-Like Cells as a Potential Progenitor Reservoir of Hepatocytes?

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Failure of hepatocyte marker-expressing hematopoietic progenitor cells to efficiently convert into hepatocytes in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Interstitium of the Human Arterial Wall Contains Very Large Amounts of Extracellular Superoxide Dismutase

1 reference

https://pubmed.ncbi.nlm.nih.gov/26353929

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.18632/ONCOTARGET.4925

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23 February 2020

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23 February 2020

PubMed publication ID

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23 February 2020

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