Remote control of gene transcription (Q36088911)

12 August 2017

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title

Remote control of gene transcription (English)

1 reference

12 August 2017

Adam G West

1

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Peter Fraser

object named as

Peter Fraser

series ordinal

2

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publication date

1 April 2005

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12 August 2017

published in

Human Molecular Genetics

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12 August 2017

volume

14 Spec No 1

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12 August 2017

page(s)

R101-11

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A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly

12 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Scanning Human Gene Deserts for Long-Range Enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Long-range activation of Sox9 in Odd Sex (Ods) mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Promoter-proximal tethering elements regulate enhancer-promoter specificity in the Drosophila Antennapedia complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Physical properties of a genomic condensed chromatin fragment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Heterochromatin and epigenetic control of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Long-range control of gene expression: emerging mechanisms and disruption in disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Molecular and cytogenetic analysis of the spreading of X inactivation in X;autosome translocations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Insulators: many functions, many mechanisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

β-Globin gene inactivation by DNA translocation in γβ-thalassaemi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The "beta-like-globin" gene domain in human erythroid cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Position-independent, high-level expression of the human beta-globin gene in transgenic mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

21 January 2018

Locus control regions

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Heterochromatin effects on the frequency and duration of LCR-mediated gene transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Conserved CTCF insulator elements flank the mouse and human beta-globin loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Beta-globin gene switching and DNase I sensitivity of the endogenous beta-globin locus in mice do not require the locus control region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The locus control region is necessary for gene expression in the human beta-globin locus but not the maintenance of an open chromatin structure in erythroid cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Bystander gene activation by a locus control region

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A global control region defines a chromosomal regulatory landscape containing the HoxD cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Campomelic dysplasia and autosomal sex reversal caused by mutations in an SRY-related gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Autosomal sex reversal and campomelic dysplasia are caused by mutations in and around the SRY-related gene SOX9

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Deletion of long-range regulatory elements upstream of SOX9 causes campomelic dysplasia

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Screening of the 1 Mb SOX9 5' control region by array CGH identifies a large deletion in a case of campomelic dysplasia with XY sex reversal

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Looping and interaction between hypersensitive sites in the active beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Capturing chromosome conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Long-range chromatin regulatory interactions in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The beta-globin nuclear compartment in development and erythroid differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The active spatial organization of the beta-globin locus requires the transcription factor EKLF

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Expression of alpha- and beta-globin genes occurs within different nuclear domains in haemopoietic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Dynamic repositioning of genes in the nucleus of lymphocytes preparing for cell division

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Spatial organization of active and inactive genes and noncoding DNA within chromosome territories

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A genetic analysis of chromosome territory looping: diverse roles for distal regulatory elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Spatial relationship between transcription sites and chromosome territories

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Active genes dynamically colocalize to shared sites of ongoing transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Predicting three-dimensional genome structure from transcriptional activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The concept of self-organization in cellular architecture

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Making contacts on a nucleic acid polymer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Quantitative comparison of DNA looping in vitro and in vivo: chromatin increases effective DNA flexibility at short distances

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Nongenic transcription, gene regulation and action at a distance

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Elongation by RNA polymerase II: the short and long of it

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

HS2 enhancer function is blocked by a transcriptional terminator inserted between the enhancer and the promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

An insulator blocks spreading of histone acetylation and interferes with RNA polymerase II transfer between an enhancer and gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Distant liaisons: long-range enhancer-promoter interactions in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Looping versus linking: toward a model for long-distance gene activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Drosophila nipped-B protein supports sister chromatid cohesion and opposes the stromalin/Scc3 cohesion factor to facilitate long-range activation of the cut gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Epigenetic analysis of the Dlk1-Gtl2 imprinted domain on mouse chromosome 12: implications for imprinting control from comparison with Igf2-H19.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Thyroid hormone-regulated enhancer blocking: cooperation of CTCF and thyroid hormone receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Imprinting regulation of the murine Meg1/Grb10 and human GRB10 genes; roles of brain-specific promoters and mouse-specific CTCF-binding sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

An evolutionarily conserved putative insulator element near the 3' boundary of the imprinted Igf2/H19 domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Both CTCF-dependent and -independent insulators are found between the mouse T cell receptor alpha and Dad1 genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

CTCF-dependent enhancer blockers at the upstream region of the chicken alpha-globin gene domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The c-myc insulator element and matrix attachment regions define the c-myc chromosomal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

CTCF, a candidate trans-acting factor for X-inactivation choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A differentially methylated imprinting control region within the Kcnq1 locus harbors a methylation-sensitive chromatin insulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: cooperation between suppressor of hairy-wing and modifier of mdg4 proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A chromatin insulator determines the nuclear localization of DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Nuclear location of a chromatin insulator in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Visualization of chromatin domains created by the gypsy insulator of Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Enhancer action in trans is permitted throughout the Drosophila genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Large scale mapping of methylcytosines in CTCF-binding sites in the human H19 promoter and aberrant hypomethylation in human bladder cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromatin loosening by poly(ADP)-ribose polymerase (PARP) at Drosophila puff loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Loss of insulator activity by paired Su(Hw) chromatin insulators.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Effects of cis arrangement of chromatin insulators on enhancer-blocking activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The centrosomal protein CP190 is a component of the gypsy chromatin insulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A novel cis-regulatory element, the PTS, mediates an anti-insulator activity in the Drosophila embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The promoter targeting sequence facilitates and restricts a distant enhancer to a single promoter in the Drosophila embryo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The functional analysis of insulator interactions in the Drosophila embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A test of insulator interactions in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Protein:protein interactions and the pairing of boundary elements in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Recruitment of histone modifications by USF proteins at a vertebrate barrier element

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Prospects and implications of using chromatin insulators in gene therapy and transgenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromatin boundaries in budding yeast: the nuclear pore connection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Barrier proteins remodel and modify chromatin to restrict silenced domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromosomal boundaries in S. cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Chromatin domain boundaries delimited by a histone-binding protein in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Braking the silence: how heterochromatic gene repression is stopped in its tracks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

Making good neighbors: The right fence for the right job

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FHMG%2FDDI104

21 January 2018

Identifiers

DOI

10.1093/HMG/DDI104

1 reference

12 August 2017

1 reference