The diversification of the basic leucine zipper family in eukaryotes correlates with the evolution of multicellularity (Q35910684)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

title

The diversification of the basic leucine zipper family in eukaryotes correlates with the evolution of multicellularity (English)

1 reference

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6 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

author name string

Katia Jindrich

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

language of work or name

1 reference

1 February 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

published in

BMC Evolutionary Biology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

volume

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

page(s)

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

REPTOR and REPTOR-BP Regulate Organismal Metabolism and Transcription Downstream of TORC1.

6 March 2020

cites work

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11 July 2018

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11 July 2018

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bZIPs and WRKYs: two large transcription factor families executing two different functional strategies

11 July 2018

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Pfam: the protein families database

11 July 2018

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Phylogenetic and transcriptional analysis of an expanded bZIP transcription factor family in Phytophthora sojae

11 July 2018

1 reference

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bZIP transcription factors in the oomycete phytophthora infestans with novel DNA-binding domains are involved in defense against oxidative stress

11 July 2018

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The Capsaspora genome reveals a complex unicellular prehistory of animals

11 July 2018

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Networks of bZIP protein-protein interactions diversified over a billion years of evolution

11 July 2018

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Premetazoan genome evolution and the regulation of cell differentiation in the choanoflagellate Salpingoeca rosetta

11 July 2018

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Mechanism of CREB recognition and coactivation by the CREB-regulated transcriptional coactivator CRTC2

11 July 2018

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MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

11 July 2018

1 reference

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Transcriptional repression by a bZIP protein regulates Dictyostelium prespore differentiation

11 July 2018

1 reference

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Using the Acropora digitifera genome to understand coral responses to environmental change

11 July 2018

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dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa

11 July 2018

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Unexpected repertoire of metazoan transcription factors in the unicellular holozoan Capsaspora owczarzaki

11 July 2018

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Exploring the bZIP transcription factor regulatory network in Neurospora crassa

11 July 2018

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AGRIS: the Arabidopsis Gene Regulatory Information Server, an update.

11 July 2018

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The Amphimedon queenslandica genome and the evolution of animal complexity

11 July 2018

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The Ectocarpus genome and the independent evolution of multicellularity in brown algae

11 July 2018

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Early evolution of metazoan transcription factors.

11 July 2018

1 reference

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Structural Basis of Alternative DNA Recognition by Maf Transcription Factors

11 July 2018

1 reference

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The importance of being flexible: the case of basic region leucine zipper transcriptional regulators

11 July 2018

1 reference

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GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4736632

The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes

11 July 2018

1 reference

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Homeodomain proteins belong to the ancestral molecular toolkit of eukaryotes

11 July 2018

1 reference

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One billion years of bZIP transcription factor evolution: conservation and change in dimerization and DNA-binding site specificity

11 July 2018

1 reference

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

11 July 2018

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Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks

11 July 2018

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Gene regulatory networks and the evolution of animal body plans

11 July 2018

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Predicting specificity-determining residues in two large eukaryotic transcription factor families

11 July 2018

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ProtTest: selection of best-fit models of protein evolution

11 July 2018

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The unicellular ancestry of animal development

11 July 2018

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HMM Logos for visualization of protein families

11 July 2018

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Transcription regulation and animal diversity

11 July 2018

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Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer-binding protein alpha

11 July 2018

1 reference

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Classification of human B-ZIP proteins based on dimerization properties

11 July 2018

1 reference

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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

11 July 2018

1 reference

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XBP1 mRNA is induced by ATF6 and spliced by IRE1 in response to ER stress to produce a highly active transcription factor

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4736632

The molecular biology and nomenclature of the activating transcription factor/cAMP responsive element binding family of transcription factors: activating transcription factor proteins and homeostasis

11 July 2018

1 reference

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The Saccharomyces cerevisiae Sko1p transcription factor mediates HOG pathway-dependent osmotic regulation of a set of genes encoding enzymes implicated in protection from oxidative damage

11 July 2018

1 reference

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Structural basis for the diversity of DNA recognition by bZIP transcription factors

11 July 2018

1 reference

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Solution structure of the transactivation domain of ATF-2 comprising a zinc finger-like subdomain and a flexible subdomain

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4736632

DNA-binding specificity of the PAR basic leucine zipper protein VBP partially overlaps those of the C/EBP and CREB/ATF families and is influenced by domains that flank the core basic region

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4736632

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

11 July 2018

1 reference

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Conserved motifs in Fos and Jun define a new class of activation domain

11 July 2018

1 reference

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The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex

11 July 2018

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Circadian clocks in the cnidaria: environmental entrainment, molecular regulation, and organismal outputs

11 July 2018

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Multicellularity arose several times in the evolution of eukaryotes (response to DOI 10.1002/bies.201100187).

24 September 2018

1 reference

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Compagen, a comparative genomics platform for early branching metazoan animals, reveals early origins of genes regulating stem-cell differentiation

24 September 2018

1 reference

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Introduction to “A Handbook of Transcription Factors”

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26831906

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12862-016-0598-Z

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

6 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

PubMed publication ID

26831906

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26831906%20AND%20SRC:MED&resulttype=core&format=json