P1 Ref Endonuclease: A Molecular Mechanism for Phage-Enhanced Antibiotic Lethality (Q35893892)

11 August 2017

P1 Ref Endonuclease: A Molecular Mechanism for Phage-Enhanced Antibiotic Lethality (English)

1 reference

11 August 2017

Erin A Ronayne

1

1 reference

11 August 2017

Y C Serena Wan

2

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11 August 2017

Beth A Boudreau

3

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11 August 2017

Robert Landick

4

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11 August 2017

Michael M Cox

5

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11 August 2017

14 January 2016

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11 August 2017

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11 August 2017

12

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11 August 2017

1

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11 August 2017

e1005797

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Creative Commons Attribution 4.0 International

11 August 2017

start time

14 January 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4713147/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Regulation of Mutagenic DNA Polymerase V Activation in Space and Time

11 July 2018

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Revisiting phage therapy: new applications for old resources.

11 July 2018

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H-NS and RNA polymerase: a love-hate relationship?

11 July 2018

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Function of the N-terminal segment of the RecA-dependent nuclease Ref.

11 July 2018

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Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria

11 July 2018

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Burkholderia cepacia complex Phage-Antibiotic Synergy (PAS): antibiotics stimulate lytic phage activity.

11 July 2018

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Escherichia coli radD (yejH) gene: a novel function involved in radiation resistance and double-strand break repair.

11 July 2018

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Silencing by H-NS potentiated the evolution of Salmonella

11 July 2018

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Evolution of resistance to a last-resort antibiotic in Staphylococcus aureus via bacterial competition

11 July 2018

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Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria

11 July 2018

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Polymerase exchange on single DNA molecules reveals processivity clamp control of translesion synthesis

11 July 2018

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Antibiotic resistance: An infectious arms race.

11 July 2018

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The Kil peptide of bacteriophage λ blocks Escherichia coli cytokinesis via ZipA-dependent inhibition of FtsZ assembly

11 July 2018

1 reference

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RecA-dependent programmable endonuclease Ref cleaves DNA in two distinct steps

11 July 2018

1 reference

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Gene product 0.4 increases bacteriophage T7 competitiveness by inhibiting host cell division.

11 July 2018

1 reference

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Insight into norfloxacin resistance of Acinetobacter oleivorans DR1: target gene mutation, persister, and RNA-Seq analyses

11 July 2018

1 reference

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Protein-DNA complexes are the primary sources of replication fork pausing in Escherichia coli

11 July 2018

1 reference

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Treatment, promotion, commotion: antibiotic alternatives in food-producing animals.

11 July 2018

1 reference

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A call for antibiotic alternatives research

11 July 2018

1 reference

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Emerging therapies for multidrug resistant Acinetobacter baumannii

11 July 2018

1 reference

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Synergistic action of gentamicin and bacteriophage in a continuous culture population of Staphylococcus aureus

11 July 2018

1 reference

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Phage-antibiotic synergism: a possible approach to combatting Pseudomonas aeruginosa.

11 July 2018

1 reference

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Comprehensive molecular characterization of human colon and rectal cancer

11 July 2018

1 reference

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Selective disruption of the DNA polymerase III α-β complex by the umuD gene products.

11 July 2018

1 reference

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Phage treatment of human infections.

11 July 2018

1 reference

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Phage-based biocontrol strategies to reduce foodborne pathogens in foods

11 July 2018

1 reference

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Phage-Borne Factors and Host LexA Regulate the Lytic Switch in Phage GIL01

11 July 2018

1 reference

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Novel reference genes for quantifying transcriptional responses of Escherichia coli to protein overexpression by quantitative PCR

11 July 2018

1 reference

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High-throughput, subpixel precision analysis of bacterial morphogenesis and intracellular spatio-temporal dynamics

11 July 2018

1 reference

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Purification and Characterization of the RecA Protein from Neisseria gonorrhoeae

11 July 2018

1 reference

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Cryptic prophages help bacteria cope with adverse environments

11 July 2018

1 reference

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Creating Directed Double-strand Breaks with the Ref Protein: A NOVEL RecA-DEPENDENT NUCLEASE FROM BACTERIOPHAGE P1

11 July 2018

1 reference

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11 July 2018

1 reference

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Phage therapy for plant disease control

11 July 2018

1 reference

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Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli

11 July 2018

1 reference

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SOS response induces persistence to fluoroquinolones in Escherichia coli

11 July 2018

1 reference

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An SOS inhibitor that binds to free RecA protein: the PsiB protein

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Coordinating DNA polymerase traffic during high and low fidelity synthesis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Engineered bacteriophage targeting gene networks as adjuvants for antibiotic therapy

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Agar and broth dilution methods to determine the minimal inhibitory concentration (MIC) of antimicrobial substances

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

High-affinity DNA binding sites for H-NS provide a molecular basis for selective silencing within proteobacterial genomes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Phage-Antibiotic Synergy (PAS): beta-lactam and quinolone antibiotics stimulate virulent phage growth

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The bacteriophage P1 hot gene, encoding a homolog of the E. coli DNA polymerase III theta subunit, is expressed during both lysogenic and lytic growth stages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Chromatin immunoprecipitation and microarray-based analysis of protein location

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Replication fork stalling at natural impediments

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Effect of anaerobic growth on quinolone lethality with Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Precise temporal modulation in the response of the SOS DNA repair network in individual bacteria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Inhibition of mutation and combating the evolution of antibiotic resistance

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Genome of bacteriophage P1

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Measurement of SOS expression in individual Escherichia coli K-12 cells using fluorescence microscopy

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Mechanisms of replication fork restart in Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

SOS response promotes horizontal dissemination of antibiotic resistance genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Mutagenic scan of the H-N-H motif of colicin E9: implications for the mechanistic enzymology of colicins, homing enzymes and apoptotic endonucleases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The bacterial RecA protein and the recombinational DNA repair of stalled replication forks

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The bacteriophage P1 HumD protein is a functional homolog of the prokaryotic UmuD'-like proteins and facilitates SOS mutagenesis in Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Recombinational DNA repair in bacteria and the RecA protein

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

DNA gyrase, topoisomerase IV, and the 4-quinolones

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Molecular aspects and mechanism of action of dihydrofolate reductase inhibitors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Identification of high affinity binding sites for LexA which define new DNA damage-inducible genes in Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Studies on the mechanism of reduction of UV-inducible sulAp expression by recF overexpression in Escherichia coli K-12.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The lytic replicon of bacteriophage P1 is controlled by an antisense RNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The tripartite immunity system of phages P1 and P7

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The SOS regulatory system of Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Regulation of cell division in Escherichia coli: SOS induction and cellular location of the sulA protein, a key to lon-associated filamentation and death

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Heteroduplex formation by recA protein: polarity of strand exchanges

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Directionality and polarity in recA protein-promoted branch migration

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Polarity of heteroduplex formation promoted by Escherichia coli recA protein

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Cell-division control in Escherichia coli: specific induction of the SOS function SfiA protein is sufficient to block septation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Enzymes of general recombination

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Sequence and deletion analysis of the recombination enhancement gene (ref) of bacteriophage P1: evidence for promoter-operator and attenuator-antiterminator control

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

A phage P1 function that stimulates homologous recombination of the Escherichia coli chromosome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATP-gamma-S or ATP.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Enhancement of Escherichia coli plasmid and chromosomal recombination by the Ref function of bacteriophage P1.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Stimulation of IS1 excision by bacteriophage P1 ref function

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Proteolysis and modulation of the activity of the cell division inhibitor SulA in Escherichia coli lon mutants

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Mechanism of specific LexA cleavage: autodigestion and the role of RecA coprotease

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The role of the SOS response in bacteria exposed to zidovudine or trimethoprim

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Structural data suggest that the active and inactive forms of the RecA filament are not simply interconvertible

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Synergistic phage-antibiotic combinations for the control of Escherichia coli biofilms in vitro.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

[The discovery of a natural phenomenon, "Phage-Antibiotic Synergy". Implications for phage therapy].

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Antibiotic-mediated recombination: ciprofloxacin stimulates SOS-independent recombination of divergent sequences in Escherichia coli.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

H-NS, the genome sentinel

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

Cooperation between RNA polymerase molecules in transcription elongation

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713147

H-NS cooperative binding to high-affinity sites in a regulatory element results in transcriptional silencing

24 September 2018

1 reference

12 December 2020

Requirement of E. coli DNA synthesis functions for the lytic replication of bacteriophage P1

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12 December 2020

Exchange of recA protein between adjacent recA protein-single-stranded DNA complexes

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12 December 2020

The topology of homologous pairing promoted by RecA protein

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12 December 2020

C1 repressor of phage P1 is inactivated by noncovalent binding of P1 Coi protein

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12 December 2020

Quantitative evaluation of recA gene expression in Escherichia coli

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12 December 2020

Biochemical basis of hyper-recombinogenic activity of Pseudomonas aeruginosa RecA protein in Escherichia coli cells

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12 December 2020

Homologous pairing and topological linkage of DNA molecules by combined action of E. coli recA protein and topoisomerase I

1 reference

12 December 2020

Autodigestion and RecA-dependent cleavage of Ind- mutant LexA proteins

1 reference

12 December 2020

The SOS regulatory system: control of its state by the level of RecA protease

1 reference

12 December 2020

Elongation of duplex DNA by recA protein

1 reference

12 December 2020

Characterization of complexes between recA protein and duplex DNA by electron microscopy

1 reference

12 December 2020

CROSSLINKING OF DNA BY ENZYMATICALLY OR CHEMICALLY ACTIVATED MITOMYCINS AND PORFIROMYCINS, BIFUNCTIONALLY "ALKYLATING" ANTIBIOTICS

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1005797

Identifiers

DOI

1 reference

11 August 2017

1 reference

11 August 2017

PubMed publication ID

26765929

1 reference