Genome-wide detection of high abundance N6-methyladenosine sites by microarray (Q35875853)

10 August 2017

Genome-wide detection of high abundance N6-methyladenosine sites by microarray (English)

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10 August 2017

Yue Li

1

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10 August 2017

Yang Wang

2

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10 August 2017

Zhaolei Zhang

3

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10 August 2017

Alicia Viridiana Zamudio

4

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10 August 2017

Jing Crystal Zhao

5

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10 August 2017

language of work or name

English

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publication date

19 June 2015

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10 August 2017

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10 August 2017

21

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10 August 2017

8

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10 August 2017

1511-1518

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describes a project that uses

10 August 2017

limma

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22 June 2022

https://europepmc.org/article/PMC/4509940

based on heuristic

inferred from PubMed Central ID database lookup

cites work

N6-methyladenosine marks primary microRNAs for processing

1 reference

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m(6)A RNA methylation is regulated by microRNAs and promotes reprogramming to pluripotency

11 July 2018

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Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification

11 July 2018

1 reference

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Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation

11 July 2018

1 reference

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High-resolution N(6) -methyladenosine (m(6) A) map using photo-crosslinking-assisted m(6) A sequencing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells

11 July 2018

1 reference

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Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites

11 July 2018

1 reference

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Methylated nucleosides in tRNA and tRNA methyltransferases

11 July 2018

1 reference

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The dynamic epitranscriptome: N6-methyladenosine and gene expression control

11 July 2018

1 reference

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Gene expression regulation mediated through reversible m⁶A RNA methylation

11 July 2018

1 reference

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Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase

11 July 2018

1 reference

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N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells

11 July 2018

1 reference

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A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation

11 July 2018

1 reference

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N6-methyladenosine-dependent regulation of messenger RNA stability

11 July 2018

1 reference

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High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis

11 July 2018

1 reference

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RNA-methylation-dependent RNA processing controls the speed of the circadian clock

11 July 2018

1 reference

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Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

doRiNA: a database of RNA interactions in post-transcriptional regulation

11 July 2018

1 reference

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N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

rtracklayer: an R package for interfacing with genome browsers

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Model-based analysis of ChIP-Seq (MACS)

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Detection and discovery of RNA modifications using microarrays

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Methylation of the nucleobases in RNA oligonucleotides mediates duplex-hairpin conversion

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Transcriptome-wide mapping of N(6)-methyladenosine by m(6)A-seq based on immunocapturing and massively parallel sequencing.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

Use of within-array replicate spots for assessing differential expression in microarray experiments

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509940

24 September 2018

Identifiers

DOI

10.1261/RNA.051474.115

1 reference

10 August 2017

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10 August 2017

PubMed publication ID

26092943

1 reference