A predictive model for regulatory sequences directing liver-specific transcription. (Q35033507)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11544200%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

title

A predictive model for regulatory sequences directing liver-specific transcription (English)

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11 November 2019

2

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11 November 2019

author name string

W Krivan

series ordinal

1

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11 November 2019

publication date

1 September 2001

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11 November 2019

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11 November 2019

volume

11

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11 November 2019

issue

9

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11 November 2019

page(s)

1559-1566

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Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

11 November 2019

cites work

1 reference

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Discovery and modeling of transcriptional regulatory regions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Molecular mechanisms of liver development and differentiation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Activation of the mouse TATA-less and human TATA-containing UDP-glucuronosyltransferase 1A1 promoters by hepatocyte nuclear factor 1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Specificity, free energy and information content in protein-DNA interactions

8 July 2018

1 reference

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Identification of regulatory regions which confer muscle-specific gene expression.

8 July 2018

1 reference

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Genomic Cis-Regulatory Logic: Experimental and Computational Analysis of a Sea Urchin Gene

8 July 2018

1 reference

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The uroguanylin gene (Guca1b) is linked to guanylin (Guca2) on mouse chromosome 4.

8 July 2018

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A novel method to develop highly specific models for regulatory units detects a new LTR in GenBank which contains a functional promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Analysis of the distribution of binding sites for a tissue-specific transcription factor in the vertebrate genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Mutations in the hepatocyte nuclear factor-1alpha gene in MODY and early-onset NIDDM: evidence for a mutational hotspot in exon 4.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Characterization of hepatic-specific regulatory elements in the promoter region of the human cholesterol 7alpha-hydroxylase gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

The role of general initiation factors in transcription by RNA polymerase II

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Functional interaction between a RARE and an AP-2 binding site in the regulation of the human HOX A4 gene promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Coordinate positioning of MEF2 and myogenin binding sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Liver-enriched transcription factors and hepatocyte differentiation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Hepatocyte nuclear factor 1 alpha activates promoter 1 of the human insulin-like growth factor I gene via two distinct binding sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Quantitative discrimination of MEF2 sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Transcriptional regulation of human and hamster microsomal triglyceride transfer protein genes. Cell type-specific expression and response to metabolic regulators

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Characterization of the 5'-flanking region of the gene for the alpha chain of human fibrinogen

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Information content of binding sites on nucleotide sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

The promoter of the human gene for insulin-like growth factor binding protein-1. Basal promoter activity in HEP G2 cells depends upon liver factor B1

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Human-mouse genome comparisons to locate regulatory sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Going the distance: a current view of enhancer action

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311083

Insulin-induced gene 33 mRNA expression in Chinese hamster ovary cells is insulin receptor dependent

25 October 2018

1 reference

12 December 2020

From Bioinformatics to Computational Biology

1 reference

12 December 2020

Constitutive expression of murine complement factor B gene is regulated by the interaction of its upstream promoter with hepatocyte nuclear factor 4

1 reference

12 December 2020

Modulation of Hepatic Gene Expression by Hepatocyte Nuclear Factor 1

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.180601

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11544200%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11544200%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

PubMed publication ID

11544200

1 reference