Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications (Q34431213)

2 August 2017

title

Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications (English)

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2 August 2017

6

Jizhong Zhou

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2 August 2017

5

Sung-Keun Rhee

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2 August 2017

Jost Liebich

1

1 reference

2 August 2017

Christopher W Schadt

series ordinal

2

1 reference

2 August 2017

Song C Chong

series ordinal

3

1 reference

2 August 2017

Zhili He

series ordinal

4

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2 August 2017

language of work or name

English

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publication date

1 February 2006

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Applied and Environmental Microbiology

2 August 2017

published in

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2 August 2017

volume

72

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2 August 2017

issue

2

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2 August 2017

page(s)

1688-1691

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Empirical establishment of oligonucleotide probe design criteria

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Molecular diversity of sulfate-reducing bacteria from two different continental margin habitats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Microarrays for bacterial detection and microbial community analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Mfold web server for nucleic acid folding and hybridization prediction

6 July 2018

1 reference

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Modeling of DNA microarray data by using physical properties of hybridization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Molecular diversity of denitrifying genes in continental margin sediments within the oxygen-deficient zone off the Pacific coast of Mexico

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Monitoring gene expression in mixed microbial communities by using DNA microarrays

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Development and evaluation of functional gene arrays for detection of selected genes in the environment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Conservation of the genes for dissimilatory sulfite reductase from Desulfovibrio vulgaris and Archaeoglobus fulgidus allows their detection by PCR.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Multiple sequence alignment with hierarchical clustering

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

Selection of optimal DNA oligos for gene expression arrays

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1392891

OligoArray: genome-scale oligonucleotide design for microarrays

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16461729

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.72.2.1688-1691.2006

1 reference

2 August 2017

1 reference

2 August 2017

1 reference