Amyloid-β peptide structure in aqueous solution varies with fragment size (Q34236938)

31 July 2017

title

Amyloid-β peptide structure in aqueous solution varies with fragment size (English)

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31 July 2017

4

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31 July 2017

Liang Xu

2

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ORCID Public Data File 2021

author name string

Olivia Wise-Scira

series ordinal

1

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31 July 2017

Taizo Kitahara

series ordinal

3

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31 July 2017

Orkid Coskuner

series ordinal

5

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31 July 2017

language of work or name

English

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publication date

1 November 2011

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Journal of Chemical Physics

31 July 2017

published in

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31 July 2017

volume

135

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31 July 2017

issue

20

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31 July 2017

page(s)

205101

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Imaging of amyloid burden and distribution in cerebral amyloid angiopathy.

31 July 2017

cites work

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Visualization of A beta 42(43) and A beta 40 in senile plaques with end-specific A beta monoclonals: evidence that an initially deposited species is A beta 42(43).

21 January 2018

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Amyloid beta-protein fibrillogenesis. Detection of a protofibrillar intermediate.

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Alzheimer's disease is a synaptic failure

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Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis

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Nucleation-dependent polymerization is an essential component of amyloid-mediated neuronal cell death.

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Direct observation of nucleation and growth in amyloid self-assembly

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NMR studies of amyloid beta-peptides: proton assignments, secondary structure, and mechanism of an alpha-helix----beta-sheet conversion for a homologous, 28-residue, N-terminal fragment

21 January 2018

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On the nucleation of amyloid beta-protein monomer folding

21 January 2018

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Solution Structures of β Peptide and Its Constituent Fragments: Relation to Amyloid Deposition

21 January 2018

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Structural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging

21 January 2018

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BACE1 inhibition reduces endogenous Abeta and alters APP processing in wild-type mice

21 January 2018

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Coordination abilities of the 1-16 and 1-28 fragments of beta-amyloid peptide towards copper(II) ions: a combined potentiometric and spectroscopic study

21 January 2018

1 reference

Energy landscapes of the monomer and dimer of the Alzheimer's peptide Abeta(1-28).

21 January 2018

1 reference

Sequence effects on the conformational properties of the amyloid beta (1-28) peptide: testing a proposed mechanism for the alpha-->beta transition

21 January 2018

1 reference

Solution structure of residues 1-28 of the amyloid beta-peptide

21 January 2018

1 reference

The structure of the Alzheimer amyloid beta 10-35 peptide probed through replica-exchange molecular dynamics simulations in explicit solvent.

21 January 2018

1 reference

Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation

21 January 2018

1 reference

The conformations of the amyloid-beta (21-30) fragment can be described by three families in solution

21 January 2018

1 reference

Structures and free-energy landscapes of the wild type and mutants of the Abeta(21-30) peptide are determined by an interplay between intrapeptide electrostatic and hydrophobic interactions

21 January 2018

1 reference

The structure of Abeta42 C-terminal fragments probed by a combined experimental and theoretical study

21 January 2018

1 reference

Amyloid beta-protein monomer folding: free-energy surfaces reveal alloform-specific differences

21 January 2018

1 reference

The Alzheimer's peptides Abeta40 and 42 adopt distinct conformations in water: a combined MD / NMR study

21 January 2018

1 reference

Structure of the 21-30 fragment of amyloid beta-protein.

21 January 2018

1 reference

Replica-exchange molecular dynamics method for protein folding

21 January 2018

1 reference

The alpha-to-beta conformational transition of Alzheimer's Abeta-(1-42) peptide in aqueous media is reversible: a step by step conformational analysis suggests the location of beta conformation seeding

21 January 2018

1 reference

Comparison of multiple Amber force fields and development of improved protein backbone parameters

21 January 2018

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Exploring protein native states and large-scale conformational changes with a modified generalized born model

21 January 2018

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A temperature predictor for parallel tempering simulations

21 January 2018

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Automated prediction of 15N, 13Calpha, 13Cbeta and 13C' chemical shifts in proteins using a density functional database

21 January 2018

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Solution NMR studies of the A beta(1-40) and A beta(1-42) peptides establish that the Met35 oxidation state affects the mechanism of amyloid formation

21 January 2018

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Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models

21 January 2018

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Human islet amyloid polypeptide monomers form ordered beta-hairpins: a possible direct amyloidogenic precursor

21 January 2018

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MD simulation of protein-ligand interaction: formation and dissociation of an insulin-phenol complex

21 January 2018

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Absolute binding free energy calculations: on the accuracy of computational scoring of protein-ligand interactions

21 January 2018

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

Simulation study of the structure and dynamics of the Alzheimer's amyloid peptide congener in solution

21 January 2018

1 reference

Atomic-Level Characterization of the Ensemble of the Aβ(1–42) Monomer in Water Using Unbiased Molecular Dynamics Simulations and Spectral Algorithms

21 January 2018

1 reference

Evaluating the Accuracy of the Quasiharmonic Approximation

21 January 2018

1 reference

Calculation of cyclodextrin binding affinities: energy, entropy, and implications for drug design

21 January 2018

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Stress Analysis at the Molecular Level: A Forced Cucurbituril-Guest Dissociation Pathway

21 January 2018

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Ligand configurational entropy and protein binding

21 January 2018

1 reference

Characterizing amyloid‐beta protein misfolding from molecular dynamics simulations with explicit water

21 January 2018

1 reference

pH-dependent conformations of the amyloid beta(1-28) peptide fragment explored using molecular dynamics

21 January 2018

1 reference

Bak regulates mitochondrial morphology and pathology during apoptosis by interacting with mitofusins.

21 January 2018

1 reference

Folding landscapes of the Alzheimer amyloid-beta(12-28) peptide.

21 January 2018

1 reference

Abeta42 is more rigid than Abeta40 at the C terminus: implications for Abeta aggregation and toxicity

21 January 2018

1 reference

Energy landscape of amyloidogenic peptide oligomerization by parallel-tempering molecular dynamics simulation: significant role of Asn ladder

21 January 2018

1 reference

Homogeneous and heterogeneous tertiary structure ensembles of amyloid-β peptides.

21 January 2018

1 reference

Zinc Binding to Alzheimer's Aβ(1–16) Peptide Results in Stable Soluble Complex

21 January 2018

1 reference

Dynamics of Asp23-Lys28 salt-bridge formation in Abeta10-35 monomers

21 January 2018

1 reference

Amyloid beta protein precursor gene and hereditary cerebral hemorrhage with amyloidosis (Dutch)

21 January 2018

1 reference

Distinct Morphologies for Amyloid Beta Protein Monomer: Aβ1–40, Aβ1–42, and Aβ1–40(D23N)

21 January 2018

1 reference

The Alzheimer β-peptide shows temperature-dependent transitions between left-handed 31-helix, β-strand and random coil secondary structures

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1063/1.3662490

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release_6u5jwetmlregdc5pkduxoj4afi

31 July 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/6u5jwetmlregdc5pkduxoj4afi

mapped directly with Wikidata item

24 November 2022

based on heuristic

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