Identification of chromosomal translocation hotspots via scan statistics (Q34136920)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24860160%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

title

Identification of chromosomal translocation hotspots via scan statistics (English)

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19 March 2020

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1

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19 March 2020

Rafael A Rosales

2

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19 March 2020

author name string

Adriano J Holanda

3

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19 March 2020

Mila Jankovic

5

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19 March 2020

Michel C Nussenzweig

4

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19 March 2020

language of work or name

English

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publication date

23 May 2014

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19 March 2020

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19 March 2020

volume

30

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19 March 2020

issue

18

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19 March 2020

page(s)

2551-2558

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WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013

19 March 2020

cites work

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Genomic EWS-FLI1 fusion sequences in Ewing sarcoma resemble breakpoint characteristics of immature lymphoid malignancies

5 July 2018

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Identification of early replicating fragile sites that contribute to genome instability

5 July 2018

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53BP1 alters the landscape of DNA rearrangements and suppresses AID-induced B cell lymphoma

5 July 2018

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DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes

5 July 2018

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A decade of 3C technologies: insights into nuclear organization

5 July 2018

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Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells

5 July 2018

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Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes

5 July 2018

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The analysis of ChIP-Seq data

5 July 2018

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Regulation of DNA end joining, resection, and immunoglobulin class switch recombination by 53BP1.

5 July 2018

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Mechanisms that promote and suppress chromosomal translocations in lymphocytes

5 July 2018

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Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes

5 July 2018

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Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5

5 July 2018

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The role of mechanistic factors in promoting chromosomal translocations found in lymphoid and other cancers

5 July 2018

1 reference

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Origin of chromosomal translocations in lymphoid cancer

5 July 2018

1 reference

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53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks

5 July 2018

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Circos: an information aesthetic for comparative genomics

5 July 2018

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Commonality but diversity in cancer gene fusions

5 July 2018

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53BP1 facilitates long-range DNA end-joining during V(D)J recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155254

Recurrent gene fusions in prostate cancer

5 July 2018

1 reference

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Mechanism and regulation of class switch recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155254

Identification of two distinct MYC breakpoint clusters and their association with various IGH breakpoint regions in the t(8;14) translocations in sporadic Burkitt-lymphoma.

5 July 2018

1 reference

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Targeting of AID to immunoglobulin genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155254

Molecular mechanisms of antibody somatic hypermutation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155254

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

5 July 2018

1 reference

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Role of genomic instability and p53 in AID-induced c-myc-Igh translocations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155254

Mechanisms of B-cell lymphoma pathogenesis

5 July 2018

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Replication protein A interacts with AID to promote deamination of somatic hypermutation targets

5 July 2018

1 reference

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Site-specific translocation and evidence of postnatal origin of the t(1;19) E2A-PBX1 fusion in childhood acute lymphoblastic leukemia

5 July 2018

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Mechanisms of chromosomal translocations in B cell lymphomas

5 July 2018

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Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2)

5 July 2018

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The apoptosis inhibitor gene API2 and a novel 18q gene, MLT, are recurrently rearranged in the t(11;18)(q21;q21) associated with mucosa-associated lymphoid tissue lymphomas

5 July 2018

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An approximation for the distribution of the scan statistic

5 July 2018

1 reference

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Analysis of t(15;17) chromosomal breakpoint sequences in therapy-related versus de novo acute promyelocytic leukemia: association of DNA breaks with specific DNA motifs at PML and RARA loci

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU351

Two levels of protection for the B cell genome during somatic hypermutation.

21 January 2018

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Genomic anatomy of the specific reciprocal translocation t(15;17) in acute promyelocytic leukemia

21 January 2018

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The Biology of Ewing sarcoma.

21 January 2018

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A novel recurrent chromosomal inversion implicates the homeobox gene Dlx5 in T-cell lymphomas from Lck-Akt2 transgenic mice

21 January 2018

1 reference

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10.1093/BIOINFORMATICS/BTU351

21 January 2018

Identifiers

DOI

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19 March 2020

0 references

journals/bioinformatics/SilvaRHNJ14

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DBLP Dataset 2021-01-02

28 January 2021

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24860160%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

PubMed publication ID

24860160

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24860160%20AND%20SRC:MED&resulttype=core&format=json