Synonymous substitutions in the Xdh gene of Drosophila: heterogeneous distribution along the coding region (Q33968688)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8913749%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

title

Synonymous substitutions in the Xdh gene of Drosophila: heterogeneous distribution along the coding region (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8913749%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

0 references

Montserrat Aguadé i Porres

series ordinal

2

1 reference

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21 October 2019

author name string

Comeron JM

series ordinal

1

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21 October 2019

language of work or name

English

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publication date

1 November 1996

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21 October 2019

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21 October 2019

volume

144

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21 October 2019

issue

3

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21 October 2019

page(s)

1053-1062

1 reference

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A method for estimating the numbers of synonymous and nonsynonymous substitutions per site

21 October 2019

cites work

1 reference

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Body size, metabolic rate, generation time, and the molecular clock

5 July 2018

1 reference

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Nucleotide divergence of the rp49 gene region between Drosophila melanogaster and two species of the Obscura group of Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Unbiased estimation of the rates of synonymous and nonsynonymous substitution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Codon usage bias and base composition of nuclear genes in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Compositional heterogeneity and patterns of molecular evolution in the Drosophila genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Simple methods for testing the molecular evolutionary clock hypothesis.

5 July 2018

1 reference

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RNA folding in Drosophila shows a distance effect for compensatory fitness interactions

5 July 2018

1 reference

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A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome

5 July 2018

1 reference

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Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Maintenance of pre-mRNA secondary structure by epistatic selection.

5 July 2018

1 reference

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Synonymous substitution rates in enterobacteria.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Automation of the computer handling of gel reading data produced by the shotgun method of DNA sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Cytogenetic analysis of the chromosomal region immediately adjacent to the rosy locus in Drosophila melanogaster.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

A comprehensive set of sequence analysis programs for the VAX

5 July 2018

1 reference

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Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Slightly Deleterious Mutant Substitutions in Evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Codon usage and tRNA content in unicellular and multicellular organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

"Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Nucleotide sequence comparison of the rp49 gene region between Drosophila subobscura and D. melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

An evaluation of the molecular clock hypothesis using mammalian DNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Missense misreading of asparagine codons as a function of codon identity and context

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

An evolutionary perspective on synonymous codon usage in unicellular organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Rates of DNA sequence evolution differ between taxonomic groups

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Mutations affecting expression of the rosy locus in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

On the rate of DNA sequence evolution in Drosophila.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Nucleotide sequence of the Xdh region in Drosophila pseudoobscura and an analysis of the evolution of synonymous codons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Lineage effects and the index of dispersion of molecular evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Molecular mapping of the rosy locus in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

The selection-mutation-drift theory of synonymous codon usage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Use of rosy mutant strains of Drosophila melanogaster to probe the structure and function of xanthine dehydrogenase.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Rates of synonymous substitution and base composition of nuclear genes in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Maintenance of genetic variability under the pressure of neutral and deleterious mutations in a finite population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Chloroplast DNA codon use: evidence for selection at the psb A locus based on tRNA availability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Nucleotide sequence of the genomic region encompassing Adh and Adh-dup genes of D. lebanonensis (Scaptodrosophila): gene expression and evolutionary relationships

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Synonymous substitutions are clustered in enterobacterial genes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1207601

Genetic variability maintained in a finite population due to mutational production of neutral and nearly neutral isoalleles

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8913749

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Very slightly deleterious mutations and the molecular clock

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8913749

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8913749%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

PubMed publication ID

8913749

1 reference