GPS-YNO2: computational prediction of tyrosine nitration sites in proteins. (Q33801074)

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20 January 2020

title

GPS-YNO2: computational prediction of tyrosine nitration sites in proteins (English)

1 reference

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20 January 2020

main subject

computational biology

1 reference

1

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20 January 2020

Yu Xue

6

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20 January 2020

4

Xinjiao Gao

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20 January 2020

author name string

Jun Cao

2

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20 January 2020

Qian Ma

3

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20 January 2020

Jian Ren

5

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20 January 2020

publication date

21 January 2011

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20 January 2020

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20 January 2020

volume

7

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20 January 2020

issue

4

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20 January 2020

page(s)

1197-1204

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Nitric oxide, oxidants, and protein tyrosine nitration

20 January 2020

cites work

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

NO-dependent protein nitration: a cell signaling event or an oxidative inflammatory response?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Protein nitration is mediated by heme and free metals through Fenton-type chemistry: an alternative to the NO/O2- reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

The nature of heme/iron-induced protein tyrosine nitration

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Conversion of tyrosine to the inflammation-associated analog 3'-nitrotyrosine at either TCR- or MHC-contact positions can profoundly affect recognition of the MHC class I-restricted epitope of lymphocytic choriomeningitis virus glycoprotein 33 by CD

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Nitration of a peptide phytotoxin by bacterial nitric oxide synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Proteomic method identifies proteins nitrated in vivo during inflammatory challenge

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Proteomic identification of tyrosine nitration targets in kidney of spontaneously hypertensive rats

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

A method for selective enrichment and analysis of nitrotyrosine-containing peptides in complex proteome samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Protein nitration in a mouse model of familial amyotrophic lateral sclerosis: possible multifunctional role in the pathogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Proteomic analysis of protein nitration in aging skeletal muscle and identification of nitrotyrosine-containing sequences in vivo by nanoelectrospray ionization tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Evidence that light modulates protein nitration in rat retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Protein tyrosine nitration in the mitochondria from diabetic mouse heart. Implications to dysfunctional mitochondria in diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Targets of tyrosine nitration in diabetic rat retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

GPS-SNO: computational prediction of protein S-nitrosylation sites with a modified GPS algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

SysPTM: a systematic resource for proteomic research on post-translational modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

A comprehensive resource for integrating and displaying protein post-translational modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

The Universal Protein Resource (UniProt) in 2010

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

NCBI BLAST: a better web interface

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Protein secondary structure prediction based on position-specific scoring matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

The GOA database in 2009--an integrated Gene Ontology Annotation resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Widespread protein aggregation as an inherent part of aging in C. elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Endogenously nitrated proteins in mouse brain: links to neurodegenerative disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Protein tyrosine nitration of aldolase in mast cells: a plausible pathway in nitric oxide-mediated regulation of mast cell function

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Autocatalytic tyrosine nitration of prostaglandin endoperoxide synthase-2 in LPS-stimulated RAW 264.7 macrophages

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

In vivo protein tyrosine nitration in S. cerevisiae: identification of tyrosine-nitrated proteins in mitochondria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Cell death: protein misfolding and neurodegenerative diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H

Effects of peroxynitrite-induced protein modifications on tyrosine phosphorylation and degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0MB00279H