Structures of discoidal high density lipoproteins: a combined computational-experimental approach (Q33717557)

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13 February 2020

title

Structures of discoidal high density lipoproteins: a combined computational-experimental approach (English)

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13 February 2020

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5

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13 February 2020

Ling Li

7

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13 February 2020

author name string

Feifei Gu

1

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13 February 2020

Martin K Jones

2

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13 February 2020

Jianguo Chen

3

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13 February 2020

James C Patterson

4

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13 February 2020

W Gray Jerome

6

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13 February 2020

Jere P Segrest

8

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13 February 2020

language of work or name

English

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publication date

30 November 2009

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Journal of Biological Chemistry

13 February 2020

published in

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13 February 2020

volume

285

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13 February 2020

issue

7

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13 February 2020

page(s)

4652-4665

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

13 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Double Superhelix Model of High Density Lipoprotein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Thermal stability of apolipoprotein A-I in high-density lipoproteins by molecular dynamics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Structure of spheroidal HDL particles revealed by combined atomistic and coarse-grained simulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Conformational adaptation of apolipoprotein A-I to discretely sized phospholipid complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

The structure of apolipoprotein A-I in high density lipoproteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Novel changes in discoidal high density lipoprotein morphology: a molecular dynamics study.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Characterization of nascent HDL particles and microparticles formed by ABCA1-mediated efflux of cellular lipids to apoA-I.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

HDL as a target in the treatment of atherosclerotic cardiovascular disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Structure and function of apolipoprotein A-I and high-density lipoprotein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Studies of synthetic peptides of human apolipoprotein A-I containing tandem amphipathic alpha-helixes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Cryo-electron microscopy of low density lipoprotein and reconstituted discoidal high density lipoprotein: imaging of the apolipoprotein moiety

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Alteration in apolipoprotein A-I 22-mer repeat order results in a decrease in lecithin:cholesterol acyltransferase reactivity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Truncation of the amino terminus of human apolipoprotein A-I substantially alters only the lipid-free conformation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

The role of apolipoprotein AI domains in lipid binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Simulated annealing with restrained molecular dynamics using a flexible restraint potential: theory and evaluation with simulated NMR constraints.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Knowledge-based protein secondary structure assignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

VMD: visual molecular dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Properties of an N-terminal proteolytic fragment of apolipoprotein AI in solution and in reconstituted high density lipoproteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Parallel helix bundles and ion channels: molecular modeling via simulated annealing and restrained molecular dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

A molecular theory of lipid-protein interactions in the plasma lipoproteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Double belt structure of discoidal high density lipoproteins: molecular basis for size heterogeneity

21 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Apolipoprotein A-I adopts a belt-like orientation in reconstituted high density lipoproteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

The spatial organization of apolipoprotein A-I on the edge of discoidal high density lipoprotein particles: a mass specrometry study

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Intermolecular contact between globular N-terminal fold and C-terminal domain of ApoA-I stabilizes its lipid-bound conformation: studies employing chemical cross-linking and mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Molecular dynamics simulations on discoidal HDL particles suggest a mechanism for rotation in the apo A-I belt model

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Smaller discoidal high-density lipoprotein particles form saddle surfaces, but not planar bilayers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Effect of carboxyl-terminal truncation on structure and lipid interaction of human apolipoprotein E4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Lipid-binding studies of human apolipoprotein A-I and its terminally truncated mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Myeloperoxidase impairs ABCA1-dependent cholesterol efflux through methionine oxidation and site-specific tyrosine chlorination of apolipoprotein A-I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

The refined structure of nascent HDL reveals a key functional domain for particle maturation and dysfunction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Identification and structural ramifications of a hinge domain in apolipoprotein A-I discoidal high-density lipoproteins of different size

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.069914

Structural studies of apolipoprotein A-I/phosphatidylcholine recombinants by high-field proton NMR, nondenaturing gradient gel electrophoresis, and electron microscopy

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Structural domains of vesicular stomatitis virus. A study by differential scanning calorimetry, thermal gel analysis, and thermal electron microscopy

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836071

Structural determination of lipid-bound ApoA-I using fluorescence resonance energy transfer

30 October 2018

1 reference

12 December 2020

Length scales of lipid dynamics and molecular dynamics

1 reference

12 December 2020

Chromatographic methods for quantitation of apolipoprotein A-I

1 reference

12 December 2020

Properties of discoidal complexes of human apolipoprotein A-I with phosphatidylcholines containing various fatty acid chains

1 reference

12 December 2020

Apolipoprotein A-I assumes a "looped belt" conformation on reconstituted high density lipoprotein

1 reference

12 December 2020

Structural features of isolated M2 helices of nicotinic receptors. Simulated annealing via molecular dynamics studies

1 reference

12 December 2020

Apolipoprotein A-I structure and lipid properties in homogeneous, reconstituted spherical and discoidal high density lipoproteins

1 reference

12 December 2020

A detailed molecular belt model for apolipoprotein A-I in discoidal high density lipoprotein

1 reference

12 December 2020

Reconstitution of high-density lipoproteins

1 reference

12 December 2020

The carboxyl-terminal hydrophobic residues of apolipoprotein A-I affect its rate of phospholipid binding and its association with high density lipoprotein

1 reference

12 December 2020

Pathogenesis of atherosclerosis

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M109.069914

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19948731%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19948731%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

19948731

1 reference