A fast dynamic mode of the EF-G-bound ribosome. (Q33690567)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

A fast dynamic mode of the EF-G-bound ribosome (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

5

1 reference

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15 January 2020

4

Kevin Y Sanbonmatsu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

author name string

James B Munro

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Roger B Altman

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Chang-Shung Tung

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

language of work or name

English

0 references

publication date

24 December 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

volume

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

page(s)

770-781

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

Spontaneous formation of the unlocked state of the ribosome is a multistep process

15 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State

21 June 2018

1 reference

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Navigating the ribosome's metastable energy landscape

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Translation factors direct intrinsic ribosome dynamics during translation termination and ribosome recycling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

GTP hydrolysis by IF2 guides progression of the ribosome into elongation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

The ribosome as a conveying thermal ratchet machine

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Mitigating unwanted photophysical processes for improved single-molecule fluorescence imaging

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Following movement of the L1 stalk between three functional states in single ribosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Ribosomal translocation: one step closer to the molecular mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structure of ratcheted ribosomes with tRNAs in hybrid states

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Role of hybrid tRNA-binding states in ribosomal translocation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Spontaneous intersubunit rotation in single ribosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

tRNA–mRNA mimicry drives translation initiation from a viral IRES

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

The process of mRNA-tRNA translocation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Elongation factor G stabilizes the hybrid-state conformation of the 70S ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structures of modified eEF2 80S ribosome complexes reveal the role of GTP hydrolysis in translocation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Intersubunit movement is required for ribosomal translocation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Kinetically competent intermediates in the translocation step of protein synthesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Identification of two distinct hybrid state intermediates on the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structure of the ribosome-bound cricket paralysis virus IRES RNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structure of the 70S ribosome complexed with mRNA and tRNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Structure of eEF3 and the mechanism of transfer RNA release from the E-site

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

The hybrid state of tRNA binding is an authentic translation elongation intermediate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Mechanisms of elongation on the ribosome: dynamics of a macromolecular machine

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

tRNA dynamics on the ribosome during translation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Single-molecule three-color FRET

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Restoration of single-channel currents using the segmental k-means method based on hidden Markov modeling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

EF-G-independent reactivity of a pre-translocation-state ribosome complex with the aminoacyl tRNA substrate puromycin supports an intermediate (hybrid) state of tRNA binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

An expanded eukaryotic genetic code

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Locking and unlocking of ribosomal motions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Features and functions of the ribosomal E site

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Estimating single-channel kinetic parameters from idealized patch-clamp data containing missed events

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Intermediate states in the movement of transfer RNA in the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

Factor-free ("non-enzymic") and factor-dependent systems of translation of polyuridylic acid by Escherichia coli ribosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2829159

tRNA selection and kinetic proofreading in translation

21 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Ribosomal Proteins S12 and S13 Function as Control Elements for Translocation of the mRNA:tRNA Complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Observation of intersubunit movement of the ribosome in solution using FRET.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Catalysis of ribosomal translocation by sparsomycin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Crystal structure of a mutant elongation factor G trapped with a GTP analogue

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

The Key–Lock Theory and the Induced Fit Theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Conformational changes of the small ribosomal subunit during elongation factor G-dependent tRNA-mRNA translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Distinct functions of elongation factor G in ribosome recycling and translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

All-atom homology model of the Escherichia coli 30S ribosomal subunit.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Peptidyl-tRNA regulates the GTPase activity of translation factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.384

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20033061

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Spontaneous, elongation factor G independent translocation of Escherichia coli ribosomes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20033061

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/EMBOJ.2009.384

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20033061%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

20033061

1 reference