Bioinformatic and expression analysis of the Brassica napus L. cyclophilins (Q33685421)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28473712%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

title

Bioinformatic and expression analysis of the Brassica napus L. cyclophilins (English)

1 reference

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19 March 2020

1 reference

Brassica napus

1 reference

Patrizia Hanhart

1

1 reference

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19 March 2020

Melanie Thieß

2

1 reference

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19 March 2020

Khalid Amari

3

1 reference

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19 March 2020

Patrick Giavalisco

5

1 reference

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19 March 2020

Julia Kehr

7

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19 March 2020

language of work or name

English

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publication date

4 May 2017

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19 March 2020

1 reference

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19 March 2020

volume

7

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19 March 2020

issue

1

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19 March 2020

page(s)

1514

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Creative Commons Attribution 4.0 International

19 March 2020

copyright license

start time

4 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Characterization of Peptidyl-Prolyl Cis-Trans Isomerase- and Calmodulin-Binding Activity of a Cytosolic Arabidopsis thaliana Cyclophilin AtCyp19-3

21 June 2018

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Proline isomerization of the immune receptor-interacting protein RIN4 by a cyclophilin inhibits effector-triggered immunity in Arabidopsis

21 June 2018

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Genome wide identification of the immunophilin gene family in Leptosphaeria maculans: a causal agent of Blackleg disease in Oilseed Rape (Brassica napus).

21 June 2018

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Cyclophilin A binds to the viral RNA and replication proteins, resulting in inhibition of tombusviral replicase assembly

21 June 2018

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Loss of all three calreticulins, CRT1, CRT2 and CRT3, causes enhanced sensitivity to water stress in Arabidopsis

21 June 2018

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Cyclophilin 20-3 relays a 12-oxo-phytodienoic acid signal during stress responsive regulation of cellular redox homeostasis.

21 June 2018

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21 June 2018

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Identification of RNA targets for the nuclear multidomain cyclophilin atCyp59 and their effect on PPIase activity.

21 June 2018

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Crystal Structure of Arabidopsis Cyclophilin38 Reveals a Previously Uncharacterized Immunophilin Fold and a Possible Autoinhibitory Mechanism

21 June 2018

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Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants

21 June 2018

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21 June 2018

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Binding of the cyclophilin 40 ortholog SQUINT to Hsp90 protein is required for SQUINT function in Arabidopsis

21 June 2018

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21 June 2018

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Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed

21 June 2018

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Classification of rice (Oryza satival. japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress

21 June 2018

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Long-distance transport of macromolecules through the phloem.

21 June 2018

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Phloem small RNAs, nutrient stress responses, and systemic mobility

21 June 2018

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Role of prolyl cis/trans isomers in cyclophilin-assisted Pseudomonas syringae AvrRpt2 protease activation

21 June 2018

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Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs

21 June 2018

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21 June 2018

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Cyclophilin 40 is required for microRNA activity in Arabidopsis

21 June 2018

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21 June 2018

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A cyclophilin links redox and light signals to cysteine biosynthesis and stress responses in chloroplasts

21 June 2018

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Ricinus communis cyclophilin: functional characterisation of a sieve tube protein involved in protein folding

21 June 2018

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A chloroplast cyclophilin functions in the assembly and maintenance of photosystem II in Arabidopsis thaliana

21 June 2018

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A WD40 domain cyclophilin interacts with histone H3 and functions in gene repression and organogenesis in Arabidopsis.

21 June 2018

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21 June 2018

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Immunophilins: for the love of proteins

21 June 2018

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21 June 2018

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Proline isomerization of histone H3 regulates lysine methylation and gene expression

21 June 2018

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Role of the cysteine residues in Arabidopsis thaliana cyclophilin CYP20-3 in peptidyl-prolyl cis-trans isomerase and redox-related functions

21 June 2018

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AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II.

21 June 2018

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Towards the proteome of Brassica napus phloem sap.

21 June 2018

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21 June 2018

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21 June 2018

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Analysis of xylem sap proteins from Brassica napus

21 June 2018

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21 June 2018

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Function-dependent clustering of orthologues and paralogues of cyclophilins

21 June 2018

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The human nuclear SRcyp is a cell cycle-regulated cyclophilin

21 June 2018

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Peptidylprolyl cis/trans isomerases (immunophilins): biological diversity--targets--functions

21 June 2018

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Cyclophilins: unexpected messengers in intercellular communications

21 June 2018

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Mitochondrial targeted cyclophilin D protects cells from cell death by peptidyl prolyl isomerization

21 June 2018

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A new family of cyclophilins with an RNA recognition motif that interact with members of the trx/MLL protein family in Drosophila and human cells

21 June 2018

1 reference

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Regulation of the tyrosine kinase Itk by the peptidyl-prolyl isomerase cyclophilin A

21 June 2018

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Proteome map of the chloroplast lumen of Arabidopsis thaliana

21 June 2018

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KIN241: a gene involved in cell morphogenesis in Paramecium tetraurelia reveals a novel protein family of cyclophilin-RNA interacting proteins (CRIPs) conserved from fission yeast to man.

21 June 2018

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Receptor accessory folding helper enzymes: the functional role of peptidyl prolyl cis/trans isomerases

21 June 2018

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A conserved domain of the arabidopsis GNOM protein mediates subunit interaction and cyclophilin 5 binding.

21 June 2018

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A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock

21 June 2018

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Expression of a gene for cyclophilin which contains an amino-terminal endoplasmic reticulum-targeting signal

21 June 2018

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Agrobacterium VirD2 protein interacts with plant host cyclophilins

21 June 2018

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Characterization of surface binding sites for cyclophilin B on a human tumor T-cell line

21 June 2018

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Cloning and characterization of chloroplast and cytosolic forms of cyclophilin from Arabidopsis thaliana.

21 June 2018

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Confirmation of the existence of a third family among peptidyl-prolyl cis/trans isomerases. Amino acid sequence and recombinant production of parvulin

21 June 2018

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Protein Disulphide Isomerase and a Lumenal Cyclophilin-Type Peptidyl Prolyl Cis-Trans Isomerase are in Transient Contact with Secretory Proteins During Late Stages of Translocation

21 June 2018

1 reference

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Cyclophilin: a specific cytosolic binding protein for cyclosporin A

21 June 2018

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A receptor for the immunosuppressant FK506 is a cis-trans peptidyl-prolyl isomerase

21 June 2018

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Two distinct signal transmission pathways in T lymphocytes are inhibited by complexes formed between an immunophilin and either FK506 or rapamycin

21 June 2018

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Folding of ribonuclease T1. 2. Kinetic models for the folding and unfolding reactions

21 June 2018

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Human and Escherichia coli cyclophilins: sensitivity to inhibition by the immunosuppressant cyclosporin A correlates with a specific tryptophan residue.

21 June 2018

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Crystal structure of recombinant human T-cell cyclophilin A at 2.5 A resolution

21 June 2018

1 reference

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Calcineurin is a common target of cyclophilin-cyclosporin A and FKBP-FK506 complexes

21 June 2018

1 reference

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Structure and expression of cytosolic cyclophilin/peptidyl-prolyl cis-trans isomerase of higher plants and production of active tomato cyclophilin in Escherichia coli

21 June 2018

1 reference

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Active site mutants of human cyclophilin A separate peptidyl-prolyl isomerase activity from cyclosporin A binding and calcineurin inhibition

21 June 2018

1 reference

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Cyclophilin A interacts with HIV-1 Vpr and is required for its functional expression

21 June 2018

1 reference

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Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling

21 January 2018

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Characterization of three Arabidopsis thaliana immunophilin genes involved in the plant defense response against Pseudomonas syringae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

The Arabidopsis cyclophilin gene family

21 January 2018

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https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Immunophilins and parvulins. Superfamily of peptidyl prolyl isomerases in Arabidopsis

21 January 2018

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Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

21 January 2018

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The Cyclophilin AtCYP71 Interacts with CAF-1 and LHP1 and Functions in Multiple Chromatin Remodeling Processes

21 January 2018

1 reference

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The major peptidyl‐prolyl isomerase activity in thylakoid lumen of plant chloroplasts belongs to a novel cyclophilin TLP20

21 January 2018

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AtCYP38 ensures early biogenesis, correct assembly and sustenance of photosystem II.

21 January 2018

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Core genome responses involved in acclimation to high temperature

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

The cyclophilin ROC1 links phytochrome and cryptochrome to brassinosteroid sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Activation of a phytopathogenic bacterial effector protein by a eukaryotic cyclophilin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Eukaryotic cyclophilin as a molecular switch for effector activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Molecular analysis of Arabidopsis endosperm and embryo promoter trap lines: reporter-gene expression can result from T-DNA insertions in antisense orientation, in introns and in intergenic regions, in addition to sense insertion at the 5' end of gen

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Mutations in a new Arabidopsis cyclophilin disrupt its interaction with protein phosphatase 2A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Peptidyl-prolyl isomerase activity in chloroplast thylakoid lumen is a dispensable function of immunophilins in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

The cyclophilin CYP20-2 modulates the conformation of BRASSINAZOLE-RESISTANT1, which binds the promoter of FLOWERING LOCUS D to regulate flowering in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

AtCYP20-2 is an auxiliary protein of the chloroplast NAD(P)H dehydrogenase complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Immunophilin AtFKBP13 sustains all peptidyl-prolyl isomerase activity in the thylakoid lumen from Arabidopsis thaliana deficient in AtCYP20-2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Chloroplast cyclophilin is a target protein of thioredoxin. Thiol modulation of the peptidyl-prolyl cis-trans isomerase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-01596-5

MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5431436

Isolation and amino acid sequence of cyclophilin.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5431436

Profound redox sensitivity of peptidyl-prolyl isomerase activity in Arabidopsis thylakoid lumen

30 October 2018

1 reference

12 December 2020

A gain-of-function mutation in the ROC1 gene alters plant architecture in Arabidopsis

1 reference

12 December 2020

Cyclophilin 40 (CyP-40), mapping of its hsp90 binding domain and evidence that FKBP52 competes with CyP-40 for hsp90 binding

1 reference

12 December 2020

A kinetic analysis of the folding of human carbonic anhydrase II and its catalysis by cyclophilin

1 reference

12 December 2020

Variations of sequences and amino acid compositions of proteins that sustain their biological functions: An analysis of the cyclophilin family of proteins

1 reference

12 December 2020

10.1038/S41598-017-01596-5

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28473712%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

19 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28473712%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

PubMed publication ID

28473712

1 reference