Model-based variance-stabilizing transformation for Illumina microarray data. (Q31142152)

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31 December 2019

title

Model-based variance-stabilizing transformation for Illumina microarray data (English)

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31 December 2019

3

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31 December 2019

Warren Kibbe

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4

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31 December 2019

author name string

Simon M Lin

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1

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31 December 2019

Pan Du

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2

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31 December 2019

language of work or name

English

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publication date

4 January 2008

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31 December 2019

published in

Nucleic Acids Research

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31 December 2019

volume

36

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31 December 2019

issue

2

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31 December 2019

page(s)

e11

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A comparison of background correction methods for two-colour microarrays

31 December 2019

cites work

1 reference

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nuID: a universal naming scheme of oligonucleotides for illumina, affymetrix, and other microarrays

21 June 2018

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A model of technical variation of microarray signals

21 June 2018

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

21 June 2018

1 reference

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A novel, high-performance random array platform for quantitative gene expression profiling

21 June 2018

1 reference

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At what scale should microarray data be analyzed?

21 June 2018

1 reference

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Estimation of transformation parameters for microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Approximate variance-stabilizing transformations for gene-expression microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Summaries of Affymetrix GeneChip probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

A variance-stabilizing transformation for gene-expression microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241869

A model for measurement error for gene expression arrays

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1075

21 January 2018

Identifiers

DOI

10.1093/NAR/GKM1075

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18178591%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

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31 December 2019

PubMed publication ID

18178591

1 reference