Exaggerated CpH methylation in the autism-affected brain (Q30841912)

22 August 2017

Exaggerated CpH methylation in the autism-affected brain (English)

1 reference

22 August 2017

0 references

4

1 reference

22 August 2017

Shannon E Ellis

1

1 reference

22 August 2017

Simone Gupta

series ordinal

2

1 reference

22 August 2017

Anna Moes

series ordinal

3

1 reference

22 August 2017

Dan E Arking

series ordinal

5

1 reference

22 August 2017

17 February 2017

1 reference

22 August 2017

1 reference

22 August 2017

8

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22 August 2017

6

1 reference

describes a project that uses

22 August 2017

limma

object named as

limma R package

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/5351204

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

H3K27 methylation: a promiscuous repressive chromatin mark

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Autism spectrum disorders: Integration of the genome, transcriptome and the environment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Advancing the understanding of autism disease mechanisms through genetics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

The interplay of histone modifications - writers that read

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Reading the unique DNA methylation landscape of the brain: Non-CpG methylation, hydroxymethylation, and MeCP2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Integrative analysis of 111 reference human epigenomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

limma powers differential expression analyses for RNA-sequencing and microarray studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Synaptic, transcriptional and chromatin genes disrupted in autism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

DNA methylation analysis of the autistic brain reveals multiple dysregulated biological pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Methylation quantitative trait loci (meQTLs) are consistently detected across ancestry, developmental stage, and tissue type

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

RNA-Seq optimization with eQTL gold standards

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Global epigenomic reconfiguration during mammalian brain development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Epigenomic strategies at the interface of genetic and environmental risk factors for autism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Human-specific CpG "beacons" identify loci associated with human-specific traits and disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Matrix eQTL: ultra fast eQTL analysis via large matrix operations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Transcriptomic analysis of autistic brain reveals convergent molecular pathology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Global methylation profiling of lymphoblastoid cell lines reveals epigenetic contributions to autism spectrum disorders and a novel autism candidate gene, RORA, whose protein product is reduced in autistic brain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Genetic control of individual differences in gene-specific methylation in human brain.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Genomic and epigenetic evidence for oxytocin receptor deficiency in autism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Capturing heterogeneity in gene expression studies by surrogate variable analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Reduced MeCP2 expression is frequent in autism frontal cortex and correlates with aberrant MECP2 promoter methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5351204

Common DNA methylation alterations in multiple brain regions in autism.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13229-017-0119-Y

Quantification of the sixth DNA base hydroxymethylcytosine in the brain

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13229-017-0119-Y

10.1186/S13229-017-0119-Y

21 January 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

22 August 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s13229-017-0119-y

1 reference

22 August 2017

PubMed publication ID

28316770

1 reference