Functions of DNA methylation: islands, start sites, gene bodies and beyond (Q29547260)

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

23 April 2017

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Jones PA

1

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

23 April 2017

language of work or name

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23 April 2017

publication date

29 May 2012

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23 April 2017

published in

Nature Reviews Genetics

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23 April 2017

volume

13

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23 April 2017

issue

7

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23 April 2017

page(s)

484-92

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

Chemistry. How are alkynes scrambled?

23 April 2017

cites work

1 reference

X inactivation, differentiation, and DNA methylation

31 March 2020

1 reference

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

31 March 2020

1 reference

DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa.

31 March 2020

1 reference

Human DNA methylomes at base resolution show widespread epigenomic differences

31 March 2020

1 reference

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

31 March 2020

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CpG islands--'a rough guide'.

31 March 2020

1 reference

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

31 March 2020

1 reference

ICF Syndrome Mutations Cause a Broad Spectrum of Biochemical Defects in DNMT3B-Mediated De Novo DNA Methylation

31 March 2020

1 reference

Rethinking how DNA methylation patterns are maintained

31 March 2020

1 reference

Reprogramming towards pluripotency requires AID-dependent DNA demethylation

31 March 2020

1 reference

DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

31 March 2020

1 reference

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

31 March 2020

1 reference

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

31 March 2020

1 reference

Loss of genomic methylation causes p53-dependent apoptosis and epigenetic deregulation

31 March 2020

1 reference

Complete inactivation of DNMT1 leads to mitotic catastrophe in human cancer cells

31 March 2020

1 reference

Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b

31 March 2020

1 reference

Dnmt3a is essential for hematopoietic stem cell differentiation

31 March 2020

1 reference

The colorful history of active DNA demethylation.

31 March 2020

1 reference

Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation

31 March 2020

1 reference

Uncovering the role of 5-hydroxymethylcytosine in the epigenome

31 March 2020

1 reference

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

31 March 2020

1 reference

Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

31 March 2020

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Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

31 March 2020

1 reference

Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

31 March 2020

1 reference

Embryonic lethal phenotype reveals a function of TDG in maintaining epigenetic stability

31 March 2020

1 reference

The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

31 March 2020

1 reference

5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming

31 March 2020

1 reference

A decade of exploring the cancer epigenome - biological and translational implications

31 March 2020

1 reference

H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes

31 March 2020

1 reference

Constitutive nucleosome depletion and ordered factor assembly at the GRP78 promoter revealed by single molecule footprinting

31 March 2020

1 reference

Polycomb-repressed genes have permissive enhancers that initiate reprogramming

31 March 2020

1 reference

Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes

31 March 2020

1 reference

DNA methylation directly silences genes with non-CpG island promoters and establishes a nucleosome occupied promoter

31 March 2020

1 reference

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

31 March 2020

1 reference

Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line

31 March 2020

1 reference

The role of DNA methylation in setting up chromatin structure during development

31 March 2020

1 reference

DNA methylation directs a time-dependent repression of transcription initiation

31 March 2020

1 reference

Comparison of transformation efficiency of human active and inactive X-chromosomal DNA.

31 March 2020

1 reference

Methylation of the Hprt gene on the inactive X occurs after chromosome inactivation

31 March 2020

1 reference

A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing

31 March 2020

1 reference

Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer

31 March 2020

1 reference

Epigenetic stem cell signature in cancer

31 March 2020

1 reference

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

31 March 2020

1 reference

OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes

31 March 2020

1 reference

Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

31 March 2020

1 reference

Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis

31 March 2020

1 reference

CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

31 March 2020

1 reference

DNA methylation: TET proteins-guardians of CpG islands?

31 March 2020

1 reference

De novo methylation of the MyoD1 CpG island during the establishment of immortal cell lines

31 March 2020

1 reference

Dominantly Inherited Constitutional Epigenetic Silencing of MLH1 in a Cancer-Affected Family Is Linked to a Single Nucleotide Variant within the 5′UTR

31 March 2020

1 reference

An Sp1/Sp3 binding polymorphism confers methylation protection.

31 March 2020

1 reference

5-Methylcytosine as an Endogenous Mutagen in the Human LDL Receptor and p53 Genes

31 March 2020

1 reference

The DNA methylation paradox

31 March 2020

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Orphan CpG islands identify numerous conserved promoters in the mammalian genome

31 March 2020

1 reference

Methylation of the hypoxanthine phosphoribosyltransferase locus on the human X chromosome: implications for X-chromosome inactivation

31 March 2020

1 reference

Gene body-specific methylation on the active X chromosome

31 March 2020

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Conservation and divergence of methylation patterning in plants and animals

31 March 2020

1 reference

A methylated CpG island 3' in the apolipoprotein-E gene does not repress its transcription

31 March 2020

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Conserved role of intragenic DNA methylation in regulating alternative promoters

31 March 2020

1 reference

Susceptibility of nonpromoter CpG islands to de novo methylation in normal and neoplastic cells

31 March 2020

1 reference

Altered chromatin structure associated with methylation-induced gene silencing in cancer cells: correlation of accessibility, methylation, MeCP2 binding and acetylation

31 March 2020

1 reference

Cytosine methylation and the ecology of intragenomic parasites

31 March 2020

1 reference

Relationship between Gene Body DNA Methylation and Intragenic H3K9me3 and H3K36me3 Chromatin Marks

31 March 2020

1 reference

Dynamic changes in the human methylome during differentiation

31 March 2020

1 reference

Chromatin organization marks exon-intron structure

31 March 2020

1 reference

Relationship between nucleosome positioning and DNA methylation

31 March 2020

1 reference

CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

31 March 2020

1 reference

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

31 March 2020

1 reference

DNA-binding factors shape the mouse methylome at distal regulatory regions

31 March 2020

1 reference

Lineage-specific DNA methylation in T cells correlates with histone methylation and enhancer activity.

31 March 2020

1 reference

DNA methylation status predicts cell type-specific enhancer activity.

31 March 2020

1 reference

Genomic sequencing reveals a positive correlation between the kinetics of strand-specific DNA demethylation of the overlapping estradiol/glucocorticoid-receptor binding sites and the rate of avian vitellogenin mRNA synthesis

31 March 2020

1 reference

5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

31 March 2020

1 reference

Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells

31 March 2020

1 reference

TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

31 March 2020

1 reference

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

31 March 2020

1 reference

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

31 March 2020

1 reference

Large scale mapping of methylcytosines in CTCF-binding sites in the human H19 promoter and aberrant hypomethylation in human bladder cancer

31 March 2020

1 reference

Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.

31 March 2020

1 reference

ReCoGnizing methylated DNA

31 March 2020

1 reference

Dynamics of DNA methylation pattern

31 March 2020

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Methylation-sensitive sequence-specific DNA binding by the c-Myc basic region

31 March 2020

1 reference

Cytosine methylation does not affect binding of transcription factor Sp1

31 March 2020

1 reference

DNA demethylation is necessary for the epigenetic reprogramming of somatic cell nuclei

31 March 2020

1 reference

A comparative analysis of DNA methylation across human embryonic stem cell lines

31 March 2020

1 reference

Moving AHEAD with an international human epigenome project.

31 March 2020

1 reference

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

31 March 2020

1 reference

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

31 March 2020

1 reference

The CpG dinucleotide and human genetic disease

31 March 2020

1 reference

Integrated genomic analyses of ovarian carcinoma

31 March 2020

1 reference

DNMT3A Mutations in Acute Myeloid Leukemia

31 March 2020

1 reference

Leukemic IDH1 and IDH2 mutations result in a hypermethylation phenotype, disrupt TET2 function, and impair hematopoietic differentiation

31 March 2020

1 reference

Physical mapping across the fragile X: hypermethylation and clinical expression of the fragile X syndrome

31 March 2020

1 reference

Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene

31 March 2020

1 reference

Nucleosomes containing methylated DNA stabilize DNA methyltransferases 3A/3B and ensure faithful epigenetic inheritance

31 March 2020

1 reference

Enhancer function: new insights into the regulation of tissue-specific gene expression

31 March 2020

1 reference

Extensive DNA methylation spanning the Rb promoter in retinoblastoma tumors

31 March 2020

1 reference

12 December 2020

Global and gene-specific epigenetic patterns in human bladder cancer genomes are relatively stable in vivo and in vitro over time

1 reference

12 December 2020

DNA modification mechanisms and gene activity during development

1 reference

12 December 2020

Active DNA demethylation: many roads lead to Rome.

1 reference

12 December 2020

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

Identifiers

2 references

23 April 2017

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

1028633739

0 references

1 reference

Consolidated OpenCitations Corpus – April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22641018

PubMed publication ID

2 references

23 April 2017

Consolidated OpenCitations Corpus – April 2017