Combining crystallography and EPR: crystal and solution structures of the multidomain cochaperone DnaJ (Q27679257)

8

object named as

Ralf Seidel

0 references

author name string

Thomas R M Barends

1

0 references

Richard W W Brosi

2

0 references

Andrea Steinmetz

3

0 references

Anna Scherer

4

0 references

Elisabeth Hartmann

5

0 references

Jessica Eschenbach

6

0 references

Thorsten Lorenz

7

0 references

Robert L Shoeman

9

0 references

Sabine Zimmermann

10

0 references

Robert Bittl

11

0 references

Jochen Reinstein

Acta Crystallographica Section D: Biological Crystallography

13

0 references

publication date

August 2013

0 references

published in

0 references

volume

69

0 references

issue

Pt 8

0 references

page(s)

1540-52

0 references

cites work

The Crystal Structure of the Human Co-Chaperone P58IPK

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Peptide-Binding Sites As Revealed by the Crystal Structures of the Human Hsp40 Hdj1 C-Terminal Domain in Complex with the Octapeptide from Human Hsp70

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The crystal structure of the putative peptide-binding fragment from the human Hsp40 protein Hdj1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

20 March 2017

A short history of SHELX

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Structural Basis of J Cochaperone Binding and Regulation of Hsp70

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The diversity of the DnaJ/Hsp40 family, the crucial partners for Hsp70 chaperones

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Specific radiation damage can be used to solve macromolecular crystal structures

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The crystal structure of the peptide-binding fragment from the yeast Hsp40 protein Sis1

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The influence of C-terminal extension on the structure of the “J-domain” in E. coli DnaJ

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Eukaryotic homologues of Escherichia coli dnaJ: a diverse protein family that functions with hsp70 stress proteins

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

REFMAC5 for the refinement of macromolecular crystal structures

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Features and development of Coot

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Automated structure solution with autoSHARP

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Likelihood-enhanced fast translation functions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

SOLVE and RESOLVE: automated structure solution and density modification

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

SOLVE and RESOLVE: automated structure solution, density modification and model building

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Substructure solution with SHELXD

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

20 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Preparation of selenomethionyl proteins for phase determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The J-protein family: modulating protein assembly, disassembly and translocation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Heat shock protein 70 kDa chaperone/DnaJ cochaperone complex employs an unusual dynamic interface.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Rotamer libraries of spin labelled cysteines for protein studies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Distance measurements on spin-labelled biomacromolecules by pulsed electron paramagnetic resonance

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

In vivo bipartite interaction between the Hsp40 Sis1 and Hsp70 in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The DnaK/ClpB chaperone system from Thermus thermophilus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Regulation of ATPase and chaperone cycle of DnaK from Thermus thermophilus by the nucleotide exchange factor GrpE.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The glycine-phenylalanine-rich region determines the specificity of the yeast Hsp40 Sis1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Mechanism of regulation of hsp70 chaperones by DnaJ cochaperones

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

A bipartite signaling mechanism involved in DnaJ-mediated activation of the Escherichia coli DnaK protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Control of folding and membrane translocation by binding of the chaperone DnaJ to nascent polypeptides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Molecular chaperone functions of heat-shock proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

DnaJ-like proteins: molecular chaperones and specific regulators of Hsp70.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

NMR structure determination of the Escherichia coli DnaJ molecular chaperone: secondary structure and backbone fold of the N-terminal region (residues 2-108) containing the highly conserved J domain.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

The conserved G/F motif of the DnaJ chaperone is necessary for the activation of the substrate binding properties of the DnaK chaperone

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

K+ is an indispensable cofactor for GrpE stimulation of ATPase activity of DnaK x DnaJ complex from Thermus thermophilus.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

A novel factor required for the assembly of the DnaK and DnaJ chaperones of Thermus thermophilus

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Site-directed mutagenesis of colicin E1 provides specific attachment sites for spin labels whose spectra are sensitive to local conformation.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

A module of the DnaJ heat shock proteins found in malaria parasites

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Left-handed polyproline II helices commonly occur in globular proteins.

2 June 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Directed evolution of the DnaK chaperone: mutations in the lid domain result in enhanced chaperone activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Structural effects of radiation damage and its potential for phasing

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

The N terminus of ClpB from Thermus thermophilus is not essential for the chaperone activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Structural analysis of a HAMP domain: the linker region of the phototransducer in complex with sensory rhodopsin II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

DafA cycles between the DnaK chaperone system and translational machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Balance of ATPase stimulation and nucleotide exchange is not required for efficient refolding activity of the DnaK chaperone.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Mechanism of the targeting action of DnaJ in the DnaK molecular chaperone system

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

DeerAnalysis2006—a comprehensive software package for analyzing pulsed ELDOR data

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Crystal structure of yeast Sis1 peptide-binding fragment and Hsp70 Ssa1 C-terminal complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Functional characterization of the DnaK chaperone system from the archaeon Methanothermobacter thermautotrophicus DeltaH.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Radiation-induced site-specific damage of mercury derivatives: phasing and implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Evaluation of competing J domain:Hsp70 complex models in light of existing mutational and NMR data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

EasySpin, a comprehensive software package for spectral simulation and analysis in EPR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Radiation-damage-induced phasing with anomalous scattering: substructure solution and phasing

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

Improved Fourier coefficients for maps using phases from partial structures with errors

21 January 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

The NH2-terminal 108 amino acids of the Escherichia coli DnaJ protein stimulate the ATPase activity of DnaK and are sufficient for lambda replication.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Isolation of the stable hexameric DnaK.DnaJ complex from Thermus thermophilus.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3727329

Dead-Time Free Measurement of Dipole–Dipole Interactions between Electron Spins

27 November 2018

1 reference

https://api.crossref.org/works/10.1107%2FS0907444913010640

DnaJ dramatically stimulates ATP hydrolysis by DnaK: insight into targeting of Hsp70 proteins to polypeptide substrates

21 January 2018

1 reference

12 December 2020

Backbone dynamics of the N-terminal domain in E. coli DnaJ determined by 15N- and 13CO-relaxation measurements

1 reference

12 December 2020

Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50

1 reference

12 December 2020

Trigonal DnaK-DnaJ complex versus free DnaK and DnaJ: heat stress converts the former to the latter, and only the latter can do disaggregation in cooperation with ClpB

1 reference

12 December 2020

Partner proteins determine multiple functions of Hsp70

1 reference

12 December 2020

Control of the DnaK Chaperone Cycle by Substoichiometric Concentrations of the Co-chaperones DnaJ and GrpE

1 reference

12 December 2020