ASAP: amplification, sequencing &amp; annotation of plastomes (Q24814064)

5 July 2017

title

ASAP: amplification, sequencing & annotation of plastomes (English)

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5 July 2017

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Amit Dhingra

1

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5 July 2017

Kevin M Folta

series ordinal

2

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5 July 2017

language of work or name

English

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publication date

7 December 2005

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5 July 2017

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5 July 2017

volume

6

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5 July 2017

issue

1

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page(s)

176

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Creative Commons Attribution 2.0 Generic

5 July 2017

copyright license

start time

1 December 2005

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April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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1 reference

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Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria x ananassa).

7 April 2017

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'Touchdown' PCR to circumvent spurious priming during gene amplification

7 April 2017

1 reference

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7 April 2017

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Automatic annotation of organellar genomes with DOGMA

7 April 2017

1 reference

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BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Complete chloroplast genome sequence of Gycine max and comparative analyses with other legume genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Chloroplast genome phylogenetics: why we need independent approaches to plant molecular evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Breakthrough in chloroplast genetic engineering of agronomically important crops

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

The first complete chloroplast genome sequence of a lycophyte, Huperzia lucidula (Lycopodiaceae).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Stable transformation of the cotton plastid genome and maternal inheritance of transgenes

28 September 2017

1 reference

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Complete Chloroplast Genome Sequences from Korean Ginseng (Panax schinseng Nees) and Comparative Analysis of Sequence Evolution among 17 Vascular Plants

28 September 2017

1 reference

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Genome-scale data, angiosperm relationships, and "ending incongruence": a cautionary tale in phylogenetics

28 September 2017

1 reference

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Plastid transformation in higher plants

28 September 2017

1 reference

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Complete Nucleotide Sequence of the Chloroplast Genome from a Leptosporangiate Fern, Adiantum capillus-veneris L

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

The Plastid Chromosome of Atropa belladonna and its Comparison with that of Nicotiana tabacum: The Role of RNA Editing in Generating Divergence in the Process of Plant Speciation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA.

28 September 2017

1 reference

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The plastid chromosome of spinach (Spinacia oleracea): complete nucleotide sequence and gene organization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Complete Structure of the Chloroplast Genome of a Legume, Lotus japonicus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Complete Structure of the Chloroplast Genome of Arabidopsis thaliana

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Complete Sequence of the Maize Chloroplast Genome: Gene Content, Hotspots of Divergence and Fine Tuning of Genetic Information by Transcript Editing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Comparative organization of chloroplast genomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Chloroplast genetic engineering via organogenesis or somatic embryogenesis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Methods for obtaining and analyzing whole chloroplast genome sequences.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Complete nucleotide sequence of the sugarcane (Saccharum officinarum) chloroplast genome: a comparative analysis of four monocot chloroplast genomes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1318494

Plastidic genome of higher plants and algae: structure and function

28 November 2018

1 reference

12 December 2020

The highly rearranged chloroplast genome of Trachelium caeruleum (Campanulaceae): multiple inversions, inverted repeat expansion and contraction, transposition, insertions/deletions, and several repeat families

1 reference

12 December 2020

The effects of plant polysaccharides and buffer additives on PCR

1 reference

12 December 2020

The rice nuclear genome continuously integrates, shuffles, and eliminates the chloroplast genome to cause chloroplast-nuclear DNA flux

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12 December 2020

Identifiers

DOI

10.1186/1471-2164-6-176

1 reference

Dimensions Publication ID

5 July 2017

1002496344

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OpenCitations bibliographic resource ID

525663

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

5 July 2017

1 reference