#Report 3
#Report 3
#Report 3
(U2140850F)
i
Table of Contents
Abstract…………………………………………………….………………………..i
Table of Contents………………………...….…….
………………………………..ii
1. Introduction……………………………………………….
……………………...1
1.1 Background……………………………………………………….………….1
1.2 Schemes and
Reactions…………………………………………....................3
2. Experimental Procedures………………………………………………………...7
2.1 Synthesis of 1,2-bis(tert-butylchlorophosphino)benzene……….……….
…...7
2.1.1 Synthesis of bis(diethylamino)chlorophosphine (Compound 1).
……....7
2.1.2 Synthesis of N,N,N’,N’–tetraethyl (2-bromophenyl) phosphonous acid
diamide (Compound 2)………………….…………………………………...8
2.1.3 Synthesis of 1,2-phenylenebis(N,N,N’,N’-tetraethylphosphinediamine)
(Compound 3) .
……………………………………………………………....9
2.1.4 Synthesis of 1,2-bis(dichlorophosphino)benzene (Compound 4)..
…...10
2.1.5 Synthesis of 1,2-bis(tert-butylchlorophosphino)benzene (Compound 5)
……………………………………………………………………………10
2.2 Synthesis of closo-hexaborate dianion [B6H6]2- 2M+
…………………..........11
2.2.1 Synthesis of [B6H6Hfac][NBu4] (Compound 6)..………………………
11
2.2.2 Synthesis of [B6H6][NBu4]2 (Compound 7)….…………………….…12
ii
2.2.3 Synthesis of [B6H6Hfac][MePPh3] (Compound 8)…..…………………
13
2.3.4 Synthesis of [B6H6][MePPh3]2 (Compound 9)….…………………….13
3. Results and Analysis………………………………………………………........14
3.1 Bis(diethylamino)chlorophosphine (Compound 1)………..
………………..14
3.2 N,N,N’,N’–tetraethyl(2-bromophenyl) phosphonous acid diamide
(Compound
2)………………………………………………………………………….…….18
3.3 1,2-phenylenebis(N,N,N’,N’-tetraethylphosphinediamine) (Compound 3)
………………………………………………………………………………..22
3.4 1,2-bis(dichlorophosphino)benzene (Compound 4)..
……………………….26
3.5 1,2-bis(tert-butylchlorophosphino)benzene (Compound 5)..
….....................30
3.6 [B6H6Hfac][NBu4] (Compound 6)….…………………………..……………34
3.7 [B6H6][NBu4]2 (Compound 7)…………….………………………………...38
3.8 [B6H6Hfac][MePPh3] (Compound 8)……………..……….………..………..42
3.9 [B6H6][MePPh3]2 (Compound 9)………………………….…………..….…
47
4. Conclusion…………………………………………………………...................52
5. References………………………………………………………………………
52
6. Appendix………………………………………………………………………..
iii
1. Introduction
1.1 Background
Boron-based compounds have been widely used in synthetic organic
chemistry, material chemistry, and medicinal chemistry. 1 Boron is
traditionally characterized as Lewis acidic and electrophilic, while its
reactivity is predominantly described in terms of its Lewis acidity and its
behavior as an electrophile. Recent studies have highlighted its
nucleophilic behaviors and there is increasing focus on its reactions with
various electrophiles. In 2006, Yamashita, Nozaki, and Segawa
reportedly discovered the first nucleophilic boryllithium which is
isolable and can react with various carbon electrophiles.2
0
In general, bulky ligands are essential in the synthesis of nucleophilic
boron compounds to reduce the high reactivity of the boron center.
However, this kind of steric protection has limited its application in
organic synthesis chemistry due to its instability when exposed to air.
Therefore, an alternative to stabilize the highly reactive nucleophilic
boron center is through the synthesis of closo-hexaborate cluster dianion
([B6H6]2- 2M+).3
Polyhedral boron clusters ([BnHn]2-, n = 6 - 12) have been introduced
by Lipscomb and co-workers in 1954 and show high stability due to the
three-dimensional electron delocalization.4 However, unlike [B12H12]2-
and [B10H10]2- which had been developed in extensive studies, [B 6H6]2-
was only synthesized and isolated ten years later due to the formation of
diborane in the process of synthesis, low yield and its decomposition in
acidic medium. In 1999, Preetz and co-workers have revealed that this
smaller boron cluster, however, exhibits significant nucleophilic
characteristics as compared to [B12H12]2-. This is because the maxima of
electron density are concentrated at the eight faces of the octahedron
structure. As a result, they are more prone to the attack of electrophiles
or the addition of facial proton (Hfac) to give [B6H6Hfac]-. This facial
proton potentially reduces the nucleophilicity of boron and can only be
eliminated using base.5
[B6H6]2- is a Brønsted base with a pKa value of 7, hence its protonated
form [B6H6Hfac]- is a weak acid. For a substitution step to occur, a neutral
or base solution is required and a strong base solution is necessary for
subsequent substitutions. Previous research has studied the substitution
reaction of [B6H6]2- and alkyl halides and revealed that an electrophilic
attack of the halogen atom to the region of octahedron facets had
occurred. 5
In light of the strong nucleophilicity and stability in the atmosphere,
we will be investigating the reactions of [B6H6]2- with a variety of
electrophilic substrates, mainly focusing on the formation of B-P bond.
1
1.2 Schemes and Reactions
In this project, 1,2-bis(tert-butylchlorophosphino)benzene
(Compound 5), closo-hexaborate dianion (Compound 7 and 9), and the
target compound (Compound 12) were synthesized as follows:
Scheme 1. Synthesis of 1.
Scheme 2. Synthesis of 2.
Scheme 3. Synthesis of 3.
2
Scheme 4. Synthesis of 4.
Scheme 5. Synthesis of 5.
Scheme 6. Synthesis of 6.
3
Scheme 7. Synthesis of 7.
Scheme 8. Synthesis of 8.
Scheme 9. Synthesis of 9.
4
With these compounds in hand, the functionalization of 7/9 will be
examined with compound 5 in the next step to synthesize the target
compound 12.
5
2. Experimental Procedures
General Information
The reactions were mainly conducted under argon using the Schlenk line
or glovebox. All glassware was dried in an oven at 190 °C overnight
before use. Solvents were dried over Na metal or CaH 2 and collected
through a reflux system. PCl3 was distilled before use and other reagents
were used as received without further purification. The nuclear magnetic
resonance spectroscopy was recorded on a Bruker BBFO1 or BBFO2-
400 (1H 400.1 MHz; 31P 162.0 MHz; 11B 128.0 MHz) spectrometers at
298 K. 1H chemical shifts are referred to tetramethylsilane, 31P NMR
chemical shifts are relative to 85% H 3PO4, and 11B NMR chemical shifts
are relative to BF3·Et2O. The chemical shifts were denoted as δ in parts
per million (ppm). The following abbreviations were used in the report:
s = singlet, d = doublet, t = triplet, sect = sextet, m = multiplet, td =
triplet of doublets, br = broad signal, br s = broad singlet. The coupling
constant J was recorded in Hz.
6
temperature and stirred overnight. The precipitate was separated through
filtration, and the filtrate was concentrated under reduced pressure using
liquid nitrogen. Distillation was conducted under reduced pressure,
yielding 1 (6.65 g, 53% yield) as a colorless oil. 6 1H NMR (CDCl3, 400
MHz): δ 3.16 (br s, 8 H, CH2), 1.14 (t, J = 8.0 Hz, 12 H, CH3); 31P{1H}
NMR (CDCl3, 400 MHz): δ 160.1 (s).
8
2.1.4 Synthesis of 1,2-bis(dichlorophosphino)benzene (Compound 4)
10
yielding a white crystalline solid (4.27 g, 35%).10 1H NMR (CDCl3, 400
MHz): δ 3.19 (m, 8 H, CH2), 1.59 (m, 8 H, CH2), 1.45 (sext, J = 7.2 Hz,
8 H, CH2), 1.00 (t, J = 6.0 Hz, 12 H, CH3), -5.29 (s, 1 H, facial proton);
11
B NMR (CDCl3, 400 MHz): δ -13.5 (d, J = 448.0 Hz, 6 B); 11B{1H}
NMR (CDCl3, 400 MHz): δ -13.5 (s).
This step was carried out under inert condition. After adding 6 and dry
dichloromethane to a 100-mL round-bottom flask, tetrabutylammonium
hydroxide (TBAOH) was added dropwise via a syringe to the flask. The
mixture was stirred for three hours after adding sodium sulphate in two
portions into the flask. The solid was filtered and the filtrate was
concentrated under reduced pressure using liquid nitrogen, forming 7
(1.64 g, 92%).3 1H NMR (CDCl3, 400 MHz): δ 3.31 (m, 8 H, CH2), 1.63
(m, 8 H, CH2), 1.44 (sext, J = 8.0 Hz, 8 H, CH2), 0.97 (t, J = 8.0 Hz, 12
H, CH3); 11B NMR (CDCl3, 400 MHz): δ -13.6 (d, J = 440.0 Hz, 6 B);
11
B{1H} NMR (CDCl3, 400 MHz): δ -13.5 (s).
11
2.2.3 Synthesis of [B6H6Hfac][MePPh3] (Compound 8)
12
In a 200 mL round-bottomed flask that contained
methyltriphenylphosphonium bromide (7.12 g, 19.9 mmol) and 40.0 mL
of dry diethyl ether, n-butyllithium (2.0 M in hexane, 10.5 mL, 20.9
mmol) was added dropwise into the flask using a syringe and stirred
overnight. The orange solution was filtered and concentrated under
reduced pressure to give methylenetriphenylphosphorane (3.14 g, 57%).
It was then dissolved in 10.0 mL of dry tetrahydrofuran and added to the
flask containing 8 and 15.0 mL of dry tetrahydrofuran. The mixture was
stirred overnight, the solid was collected through filtration and dried
under vacuum to give 9 (1.34 g, 77%) as the final product. 3 1H NMR
(CDCl3, 400 MHz): δ 7.77 (m, 9 H, CH), 7.62 (m, 6 H, CH2), 3.43 (d, J
= 13.0 Hz, 3 H, CH3); 11B NMR (CDCl3, 400 MHz): δ -12.8 (d, J =
119.3 Hz, 6 B); 11B{1H} NMR (CDCl3, 400 MHz): δ -12.8 (s); 31P{1H}
NMR (CDCl3, 400 MHz): δ 21.7 (s).
13
The product was considered pure based on the 1H NMR and 31
P{1H}
NMR spectra shown in Figure 2 and Figure 3.
CDCl3
14
Figure 3. 31P{1H} NMR spectrum of 1 in CDCl3.
15
HB
CDCl3
HA
HA has a larger chemical shift and appears in the downfield peak because
it is closer to the nitrogen atom which is very electronegative that can
pull electrons away from HA, causing it to be more deshielded. The
peaks appearing at around 1.21 ppm and 3.48 ppm come from diethyl
ether, which is the solvent used and becomes the impurity in the product.
16
Figure 5. Reaction mechanism to form 1.
PCl3 acts as an electrophile due to the presence of empty d orbitals that
can accept electrons from nitrogen. The surrounding chlorine atoms also
pull the electron away from the phosphorus center, making it electron
deficient. The equivalence of diethylamine to PCl 3 is 4:1, indicating that
two molecules of diethylamine are needed to react with PCl 3 to form 1,
while another 2 molecules of diethylamine reacted with Cl - to form
precipitates.
17
C6D6
18
Figure 7. 31P{1H} NMR spectrum of 2 in C6D6.
19
HF
HE
: HA
: HB
: HC
: HD
: C6D6
20
Figure 9. Reaction mechanism to form 2.
N-butyllithium is a strong nucleophile that can attack 1,2-
dibromobenzene to generate carbanion. This carbanion act as a
nucleophile to attack ClP(NEt2)2 to form the final product.
1-bromobutane is soluble in diethyl ether, thus it was removed together
with the solvent in the rotary evaporator. Lithium chloride which is
water-soluble was removed from the product during extraction where the
aqueous layer was discarded.
21
C6D6
22
Figure 11. 31P{1H} NMR spectrum of 3 in C6D6.
23
HD
HC
HA HB C6D6
24
Figure 13. Reaction mechanism to form 3.
Similarly, N-butyllithium carry out nucleophilic attack on to form a
carbanion which can then act as a nucleophile to attack ClP(NEt 2)2 to
form the final product.
The by-products were removed in similar manners where 1-
bromobutane was removed along with the solvent and lithium chloride
was removed during filtration with n-pentane.
d) 1,2-bis(dichlorophosphino)benzene (Compound 4)
The product from 3 and HCl in diethyl ether was a colorless solution
with a large amount of white precipitate. The product was concentrated,
filtered and concentrated again to give a clear colorless with a relatively
low yield (44%). The low yield may be due to the loss of product during
removal of solvent as some product could be dissolved in the solvent.
There are impurities and by-products presented in the product based on
the 1H NMR spectrum shown in Figure 14.
25
C6D6
26
Figure 15. 31P{1H} NMR spectrum of 4 in C6D6.
27
Silicon grease
C6D6
HA HB
28
hydrochloride still existed in the product, Hence, the extraction should
be repeated for a few more times to ensure complete removal of
diethylamine hydrochloride.
e) 1,2-bis(tert-butylchlorophosphino)benzene (Compound 5)
The product yielded from 4 and tBuMgCl was a pale yellow solution.
After the removal of solvent, filtration and concentrated under reduced
pressure, the product became a pale yellow oil which solidified later.
The yield is moderately low (54%) because during the preparation of
tBuMgCl, the magnesium did not fully reacted with tBuCl, some of the
magnesium was suspended in the solution. It may be necessary to heat at
reflux to drive the reaction to completion.
From the 1H NMR spectrum, the product was considered relatively pure,
with some solvent peaks presented.
29
CD3CN
30
Figure 19. 31P{1H} NMR spectrum of 5 in CD3CN.
31
HC
THF
CD3CN THF
H HB
A
32
Figure 21. Reaction mechanism to form 5.
Grignard reagent is a good nucleophile that can react with 1,2-
bis(dichlorophosphino) benzene to form the final product.
Magnesium chloride is highly soluble in water and can be removed by
extraction with dichloromethane.
f) [B6H6Hfac][NBu4] (Compound 6)
33
methanol), causing some of the crystals to dissolve in methanol and led
to a low yield (35%) with relatively high purity.
CDCl3
34
Figure 23. 11B NMR spectrum of 6 in CDCl3.
35
Figure 24. 11B{1H} NMR spectrum of 6 in CDCl3
36
CH3
CH2
CH2
CDCl3 CH2
Hfac
g) [B6H6][NBu4]2 (Compound 7)
The product was a white solid with 92% of yield and showed high purity
according to the NMR spectra.
37
CDCl3
38
Figure 27. 11B NMR spectrum of 7 in CDCl3.
39
Figure 28. 11B{1H} NMR spectrum of 7 in CDCl3
40
CH3
CDCl3
CH2
CH2 CH2
The product was a white crystalline solid with a low yield (38%). It was
because the after adding triphenylphosphonium bromide into Na2B6H6,
41
the mixture was not stirred for three hours and led to incomplete
reaction, resulting in loss of product. However, the product was
considered pure based on the NMR spectra shown below.
CD2Cl2
42
Figure 31. 11B NMR spectrum of 8 in CD2Cl2.
43
Figure 32. 11B{1H} NMR spectrum of 8 in CD2Cl2.
44
Figure 33. 31P{1H} NMR spectrum of 8 in CD2Cl2.
45
CH3
CH
CD2Cl2
B-H Hfac
46
After the solid was collected through filtration and dried in vacuo, a
yellow powder was obtained with 77% of yield. The NMR spectra
indicates that the product was moderately pure.
CDCl3
47
Figure 36. 11B NMR spectrum of 9 in CDCl3.
48
Figure 37. 11B{1H} NMR spectrum of 9 in CDCl3.
49
Figure 38. 31P{1H} NMR spectrum of 9 in CDCl3
50
CDCl3
CH
CH3
4. Conclusion
In this project, a variety of compounds have been prepared for the
synthesis of the final compound. The reactivity of closo-hexaborate
cluster will be investigated through the reaction with the phosphine
ligand.
5. References
51
1. Pécharman, A.-F., Colebatch, A. L., Hill, M. S., McMullin, C. L.,
Mahon, M. F., & Weetman, C. (2017). Easy access to nucleophilic
boron through diborane to magnesium boryl metathesis. Nature
Communications, 8(1).
2. Segawa, Y., Yamashita, M., & Nozaki, K. (2006). Boryllithium:
Isolation, characterization, and reactivity as a boryl anion. Science,
314(5796), 113–115.
3. Mu, X., Axtell, J. C., Bernier, N. A., Kirlikovali, K. O., Jung, D.,
Umanzor, A., Qian, K., Chen, X., Bay, K. L., Kirollos, M.,
Rheingold, A. L., Houk, K. N., & Spokoyny, A. M. (2019). Sterically
unprotected nucleophilic boron cluster reagents. Chem, 5(9), 2461–
2469.
4. Eberhardt, W. H., Crawford, B., & Lipscomb, W. N. (1954). The
valence structure of the boron hydrides. The Journal of Chemical
Physics, 22(6), 989–1001.
5. Preetz, W., & Peters, G. (1999). The hexahydro-closo-hexaborate dianion
[B6H6]2– and its derivatives. European Journal of Inorganic Chemistry,
1999(11), 1831–1846.
6. Qin, L., Ren, X., Lu, Y., Li, Y., & Zhou, J. S. (2012). Intermolecular
Mizoroki-Heck reaction of aliphatic olefins with high selectivity for
substitution at the internal position. Angewandte Chemie, 124(24),
6017–6021.
7. Bresien, J., Michalik, D., Schulz, A., Villinger, A., & Zander, E.
(2020). Azadiphosphaindane‐1,3‐diyls: A class of resonance‐
stabilized biradicals. Angewandte Chemie, 60(3), 1507–1512.
8. Köster, M., Kreher, A., & von Hänisch, C. (2018). Synthesis of
ternary group 13/15 chain compounds. Dalton Transactions, 47(24),
7875–7878.
9. Kyba, E. P., Kerby, M. C., & Rines, S. P. (1986). A convenient
synthesis of symmetrical and unsymmetrical 1,2-
bis(phosphino)benzenes as ligands for transition metals.
Organometallics, 5(6), 1189–1194.
52
10. Kabbani, R. M. (1996). High yield synthesis of [(C 4H9)4N][Ni(η5-
C5H5)B6H6]. Polyhedron, 15(12), 1951–1955.
6. Appendix
NMR Spectra
53
Figure 6b. 31P{1H} NMR spectrum of 1 in CDCl3.
54
Figure 6c. 1H NMR spectrum of 2 in C6D6.
55
Figure 6d. 31P{1H} NMR spectrum of 2 in C6D6.
56
Figure 6e. 1H NMR spectrum of 3 in C6D6.
57
Figure 6f. 31P{1H} NMR spectrum of 3 in C6D6.
58
Figure 6g. 1H NMR spectrum of 4 in C6D6.
59
Figure 6h. 31P{1H} NMR spectrum of 4 in C6D6.
60
Figure 6i. 1H NMR spectrum of 5 in CD3CN.
61
Figure 6j. 31P{1H} NMR spectrum of 5 in CD3CN.
62
Figure 6k. 1H NMR spectrum of 6 in CDCl3.
63
Figure 6l. 11B NMR spectrum of 6 in CDCl3.
64
Figure 6m. 11B{1H} NMR spectrum of 6 in CDCl3
65
Figure 6n. 1H NMR spectrum of 7 in CDCl3.
66
Figure 6o. 11B NMR spectrum of 7 in CDCl3.
67
Figure 6p. 11B{1H} NMR spectrum of 7 in CDCl3
68
Figure 6q. 1H NMR spectrum of 8 in CD2Cl2.
69
Figure 6r. 11B NMR spectrum of 8 in CD2Cl2.
70
Figure 6s. 11B{1H} NMR spectrum of 8 in CD2Cl2.
71
Figure 6t. 31P{1H} NMR spectrum of 8 in CD2Cl2.
72
Figure 6u. 1H NMR spectrum of 9 in CDCl3.
73
Figure 6v. 11B NMR spectrum of 9 in CDCl3.
74
Figure 6w. 11B{1H} NMR spectrum of 9 in CDCl3.
75
Figure 6x. 31P{1H} NMR spectrum of 9 in CDCl3
76