Ijca 57a 2018 1351-1357
Ijca 57a 2018 1351-1357
Ijca 57a 2018 1351-1357
C-S bond cleavage influenced by metal coordination in Zn(II) bound Schiff base
complex: synthesis, structural characterization, catecholase and phenoxazinone
synthase activities
Ayon Kanti Ghosha, Arnab Chatterjeea, Sarat Chandra Kumara, Chandra Shekhar Purohitb & Rajarshi Ghosh a,*
a
Department of Chemistry, The University of Burdwan, Burdwan 713 104, India
b
Department of Chemical Sciences, National Institute of Science Education and Research, Bhubaneswar 751 005, India
Email: [email protected]
Received 1 March 2018; revised and accepted 23 October 2018
A new zinc(II) Schiff base complex (1) has been synthesized and X-ray crystallographically characterized. It crystalizes
in P2/c space group with monoclinic crystal system. One C-S bond in a (N,S,O) donor organic ligand has been found to be
cleaved on reaction with the zinc(II) perchlorate hexahydrate to yield 1 with new ligand formulation. Complex 1 is found to
be both catecholase and phenoxazinone synthase active in MeOH at room temperature. Michaelis-Menten kinetics for each
of the activities has been investigated. The turn over numbers for catecholase and phenoxazinone synthase activities are
4.31×102 and 5.27×105 h-1, respectively.
Keywords: Zinc(II), Schiff base, X-ray structure, Catecholase activity, Phenoxazinone synthase activity
Molecular models of the active sites of different includes activation (cleavage) of different bonds
metalloenzymes and their use to activate like C-H15, C-C 16, C-S17, etc., upon transition
molecular/aerial oxygen for different organic metal coordination. Among these the C-S bond
transformations are very much important as the method cleavage is important not only in organic synthesis17 but
is easy, green as well as economic1,2. Mimicking also in petroleum industry where removal of organo-
catechol oxidase is a trend in synthetic coordination sulphur compounds present in petroleum-based
chemistry since its discovery in 19983-6. Catechol feedstock18 is important.
oxidase is a copper containing protein7 which catalyses
the catechol-quinone conversion (Scheme 1) in the
plant tissues. Copper compounds of different nuclearity
which catalyse to convert catechol to quinone in
laboratory are reported in literature4-6. Phenoxazinone
synthase is another multicopper oxidase which is found
in the bacterium Streptomyces antibioticus. This is
responsible for six electron oxidative coupling of two
molecules of an o-aminophenol derivative, 4-methyl-3-
hydroxyanthraniloyl pentapeptide to phenoxazinone
chromophore (Scheme 2). Few copper complexes
which mimic the phenoxazinone synthase are reported
in literature8. Now a days a number of non-copper
complexes of different nuclearity are found in literature
which are catalysing catecholase and/or phenoxazinone
synthase activities9-14. Few redon inactive Zn(II)
complexes which are redox inactive are known to
catalyse those activities11,12.
Different synthetic strategies towards synthesis of
coordination molecules of different functionalities
1352 INDIAN J CHEM, SEC A, NOVEMBER 2018
N, 6.17. Found: C, 52.51; H, 5.35; N, 6.14. IR cm-1 (KBr): microscope. Diffraction data at 293(2) K were
2915s, 1622s, 752s, 654s. UV-vis (MeOH, nm): λmax () collected on a Smart Apex CCD diffractometer
at 239, 258, 321 and 363. using Mo-K radiation (λ = 0.71073 Å). Systematic
absence led to the identification
X-ray diffraction study of space group P2/c. The structure was solved by
A summary of the crystallographic data and direct methods, and the structure solution
structure refinement parameters are given in and refinement were based on |F|2. All
Table 1. Single crystals [size: 0.23×0.30×0.38 mm3] non-hydrogen atoms were refined with anisotropic
of 1 were obtained by slow evaporation of MeOH- displacement parameters whereas hydrogen
H2O solution of the reaction mixture. Light orange atoms were placed in calculated positions where
crystals suitable for X-ray crystallographic analysis possible and given isotropic U values 1.2 times that
were selected following examination under a of the atom to which they are bonded. At
convergence the final residuals were R1 = 0.0559;
Table 1 –– Crystal data and structure refinement parameter of wR2 = 0.1526 with I2(I), goodness-of-fit = 1.041.
compound 1 The final differences Fourier map showed the
CCDC No. 1563187 maximum and minimum peak heights at 0.573 and
Emperical formula C20H24 N2O2 S2Zn -0.493 e Å-3. All calculations were carried out
Formula weight 453.96 using SHELXTL 5.1019.
Temperature (K) 293(2)
Wavelenght (Å) 0.71073 Results and Discussion
Crystal system Monoclinic Synthesis and formulation
Space group P2/c The organic ligand H2L was prepared by
Unit cell dimensions abstracting the proton of 2-mercaptoethanol by
a (Å) 18.4340(7) sodium ethoxide which was prepared in situ.
b (Å) 5.7108(2) 3-Chloropropylamine was mixed with this reaction
c (Å) 20.3467(7)
mixture to get 2-(3-aminopropylthio)ethanol which on
α (˚) 90
further condensation with salicyaldehyde resulted in
β (˚) 97.354(2)
the ligand H2L. This was characterized through
γ (˚) 90
proton NMR (Supplementary Data, Fig. S1a and
Volume (Å3) 2124.34(13)
S1b). Zinc(II) perchlorate was added to the solution of
Z 4
Calculated densisty Dcalc (mg m-3) 1.820
the H2L with stirring. This produced the metal
Absorption coefficient(mm-1) 1.600 complex 1 which on single crystal X-ray diffraction
F(000) 1176 revealed that one of the C-S bonds in the ligand
Crystal size (mm3) 0.38×0.3×0.23 framework was cleaved and the zinc(II) complex of
Theta range for data collection (˚) 1.114 - 25.378 HL (which appeared as a new metal bound ligand)
Index ranges –22 ≤ h ≤ 22, –5 ≤ k ≤6, was generated. C-S bond cleavage in presence of
–24 ≤ l ≤24 metal salts reported in literature17. As we used Zn(II)
Reflections collected 19576 perchlorate for the synthesis of the metal complex, a
Independent reflections 3886 [Rint = 0.0475] question may arise whether the resulting perchloric
Completeness of theta 99.8 % [θ = 25.378] acid resulted in the reaction is cleaving the C-S bond
Absorption correction Multi-scan of the ligand framework or not. To evaluate this
Tmax and Tmin 0.5969 and 0.7452 aspect we repeated the reaction with Zn(II) acetate
Refinement method Full matrix and got the same complex with the same molecular
Data/restrains/parameters 3886/0/ 236 structure as from the single crystal X-ray diffraction
Goodness-of fit (GOF) F2 1.041 (Supplementary Data, Table S1). Here the resulting
Final R index [l >2σ(l)] R1 = 0.0559 and acetic acid being weak might not be able to cleave the
wR2 = 0.1526 C-S bond. So it is clearly seen that
R index (all data) R1 = 0.0946 and
metal coordination is playing the sole role for
wR2 = 0.1790
0.607, –0.439
this very cleavage and not the acid which was formed
Largest difference between peak and
hole (e Å-3) as a by-product.
1354 INDIAN J CHEM, SEC A, NOVEMBER 2018
in UV-vis repetitive scan which continued for 2 h quinone [3,5-DTBQ]-Na+ (Supplementary Data, Fig.
(Supplementary Data, Figs. S3 and S4). S6). To obtain a mechanistic inference of the
catecholase activity and to get an idea about the
Enzyme kinetics study complex-substrate intermediate, the formation of a
Kinetic experiments were performed complex-substrate adduct is identified by the peak at
spectrophotometrically with complex 1 and the m/z = 675.59 (Supplementary Data, Fig. S7). The
substrate 3,5-DTBC in methanol, thermostated at proposed structure of this adduct is given in Scheme 4.
20 °C. The complex solution (0.04 mL), with a The catechol derivative, 3,5-DTBC gets oxidised to
constant concentration of 1×10-4 M, was added to 2 mL quinone in presence of oxygen. The aerial oxygen that
of 3,5-DTBC of a particular concentration (varying its oxidises 3,5-DTBC to 3,5-DTBQ in this process is
concentration from 1×10-3 M to 1×10-2 M) to achieve converted to H2O2. H2O2 thus liberated was identified
the final concentration of the complex as 1×10-4 M. and characterized spectrophotometrically. Details of
The conversion of 3,5-DTBC to 3,5-DTBQ was spectrophotometric detection of H2O2 in the oxidation
monitored with time at a wavelength of 401 nm for reaction22 are given as supplementary data.
solutions in MeOH. The rate for each concentration of
the substrate was determined by the initial rate method. Phenoxazinone synthase activity
The rate versus concentration of substrate data Spectrophotometric study
were analyzed on the basis of Michaelis-Menten The phenoxazinone synthase activity study was
approach of enzymatic kinetics to obtain the carried out using the substrate o-aminophenol
Lineweaver-Burk (double reciprocal) plot as well as (OAPH). OAPH shows bands at 286 and 232 nm in
the values of the various kinetic parameters viz.,Vmax,
KM and Kcat. The observed rate versus [substrate] plot
as well as Lineweaver-Burk plot in methanol
solutions are given in Fig. 3. The kinetic parameters
are listed in Supplementary Data, Table S2. The
turnover number (Kcat) is 4.31×102 h-1.
Reaction mechanism
The catalytic process follows a two-step
mechanistic pathway. The first step is the rate
determining step. Probably, in this step, the 1:1 adduct
of catechol and the zinc complex is formed and a
1:100 mixture of complex 1 and 3,5-DTBC is
obtained. The complex 1 exhibits a peak at m/z =
453.64 (Supplementary Data, Fig. S5). The peak at
m/z = 243.56 can be assigned to sodium aggregate of
Fig. 3 –– Plot of rate versus [substrate] (3,5-DTBC) in presence of Fig. 4 –– Change in spectral pattern of complex 1 after reaction
1 in MeOH. [Inset: Lineweaver-Burk plot]. with OAPH (the reaction was observed for 6 h in methanol).
1356 INDIAN J CHEM, SEC A, NOVEMBER 2018
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