Breeding and Genetics
Breeding and Genetics
Breeding and Genetics
AQUACULTURE PRODUCTION
Gitau Alex N.
Course
Professor’s Name
University
City (State)
Date
1. Choice of farming candidate. Target: 250 Mil. Fry -750 kg eggs.
The Dicentrarchus labrax, popularly known as the sea bass, is a saline water fish that belongs
to the family Dicentrarchus (Santos et al., 2010). The European sea bass is the fish of choice
for this particular exercise (Korkut et al., 2017). The fish will be reared in Turkey. The fish is
present in the Black Sea, the Atlantic Ocean, and the Mediterranean Sea.
The best candidate is the European sea bass, and the identified county is Turkey.
Turkey is surrounded by four seas that give it a diverse and rich coastline, which supports
numerous economic activities (Rad, Aytemiz, & Sen, 2018). The county has about 26 million
ha of total available water surface. Rivers, in Turkey, measure approximately 177 714 km in
length (Pulatsü, 2003). These are crucial natural resources in the production of fish. In 2017,
marine capture fishery was responsible for up to ninety-one percent of the net capture and it
generated 322 173 tonnes from all the seas within and surrounding Turkey.
knowledge has led to the rise in the national aquaculture output in the recent decades. The fast
growth of the aquacultural sector in Turkey has sealed its position as the largest producer in
the Mediterranean Sea. As of now, the country produces huge quantities of the sea bass, and
rainbow trout (Lazard et al., 2011). Turkey has also extended its production to the Black sea,
where it cultivates the European sea bass and trout (Kayhan & Olmez, 2014). It is important
to note that the aquaculture in Turkey is majorly pegged on the intensive systems cultivating
The increasing Turkish population and decreasing natural stocks has made many
the problems facing the by sector (Fırat & Saka, 2006). In Turkey, numerous researches have
been carried on the cultivation of sea bream and sea bass fish and their results recorded. The
geographical location considered for the rearing of the sea bass in Turkey is of ideal terms and
will surely affect the development of Turkey's seafood aquaculture sector (Fırat & Saka,
2006). The Aegean, the Black Sea and the Mediterranean are suitable areas for cultivation of
marine species.
In Turkey, Sea Bass (Dicentrarchus labrax) larvae cultivation studies started in 1984
in a private enterprise. By the end of the 1980s, the production of the European sea bass was
expressed in millions (Fırat & Saka, 2006). The Sea Bass is popular for its high quality of
meat. Apart from its superior meat quality, the fish is of great importance to the people living
in the Mediterranean region (Alpbaz, 2005) and these are just some of the reasons why the
The basic design for a substantial brood stock and seed production depends on the
annual seed/fry production target of the production facility. To produce 250 million fry, the
eggs needed are about 700-750 kg, when one takes into consideration about 20 % loss, based
on the published data of FAO. Sea Bass (Dicentrarchus labrax) live in waters with a
temperature of about 5-28° C and lay eggs in waters that have a temperature ranging between
12-14 ° C. In the natural environment it has been reported that a female of 1 kg can lay
293,000-358,000 eggs (Kennedy and Fitzmaurice, 1972). The tanks that are needed where the
brood stock will be kept depends on the size and stock density. To produce 750 kg eggs the
number of tanks that will be needed is about 36 tanks of 30 tonnes, including 3 periods on an
annual base. The brood stock unit should have a filtration, heating, and cooling systems
For enabling a current brood stock production line it is important that sea bass brood
where the fish needs to get used to the environment, water conditions and feeding rhythms in
the hatchery. Without acclimatization, the result may have negative impacts on the
750 kg eggs, is about 950 female sea bass of 4 kg in average and 2.850 kg male sea bass of
2.5 kg in average. Bromage and Roberts (1995) reported 10 female individuals of 0.8-3.0 kg
Table 1, TSI (Turkish statistical institute), 2020. Turkish Aquaculture Production, Marine
Water
to natural evolution selection pressures. Once the fish are removed from the wild and isolated,
one introduces an irreversible change in the cohort’s gene pool (Colakoglu et al., 2018). These
changes are attributed to inbreeding and gradual loss of gene form. Hence, in place of the
brood stock that are old and not performing well and to avoid gene losses, the new ones can
2. The facilities.
This section focuses on the European sea bass seeds, specifically the fry of 1 to 2 grams. To
realize this, then a special facility that will aid in the fish farming must be set up. The
A pump
Growing tanks
Earth ponds
Hatchery
An accommodation facility
The hatchery building will be the official production unit containing all the necessities
to help realize the 1 g fry. Among the requirements within the hatchery include spawning,
weaning, live food culture, and larval rearing (Reyes-Lopez et al., 2018). Also, the hatchery
mounted on the on-growing system. The internal maturation unit together with the external
brood stock unit will be fitted with a flow-through circuit. On the other hand, the weaning and
larval rearing units will be connected to the recycling systems that are autonomous and this
will help save on water heating (Christie, Marine, & Rod). Elimination of the accumulating
ammonia from the system is achieved by fitting the system with down-flow bio-filters. When
the external temperatures allow, the weaning units will be allowed to work on an open-circuit
basis.
To optimize the quality of water, the supply of water for the make-up water and live
food mass culture unit will be sieved on diatom powder filters and selective gravel under
pressure.
The hatchery will operate by utilizing its own wild breeders stock that is maintained
within a tank. Breeders are trapped and caught during autumn, then they are subjected to
selection and then treated to give spawning (Christie, Marine, & Rod). Spawns arise from the
internal tanks, where fertilized eggs are automatically gathered and moved to the hatching
tanks. After hatching occurs, the larvae is fed on plankton that have been cultured just within
the facility. Phytoplankton and zooplankton are reared within a controlled environment and
they form the live food mass culture. The sterilization of water and filtration, together with
aeration and addition of necessary nutrients helps ensure that an optimal medium for growth
The water is recycled during the early weaning and rearing stages of the larvae. To
maintain suitable environmental conditions within the system, then the water is sterilized
using U.V. rays, aerated using blowers, heated to a suitable temperature using a heat
exchanger, and lastly, purified using a polyurethane foam filter bed (Massa, Onofri &
Fezzardi, 2017). Thirty cylindrical tanks are necessary for the conical bottoms for larval
3. A review of the current application of genetic technologies for the sea bass.
Unintentional selection – within hatcheries, seeds are produced for the purposes of restocking
and unplanned selection can change the fish genotype in a manner that weakens its ability to
For food fish, unintentional selection can alter the pool gene adversely by jettisoning
valuable alleles for illnesses and growth, hence, negatively affecting the merit of the future
selection programs.
Inbreeding depression refers to the minimized biological fitness within a given population
that results breeding of closely related individuals. Biological fitness of the population can be
defined as the organism’s capability of surviving and perpetuating its genes (Kincaid, 1983).
The inbreeding depression is usually attributed to population bottleneck. Generally, the higher
the genetic variation the higher the gene pool in that population, hence there are minimal
the mating systems. When inbreeding happens to a closely related European sea bass fish, it
often causes the interbreeding depression that is disclosed as the lower growth rates, general
fitness loss, poor survival, fecundity loss, and a high incidence of deformities (Kincaid, 1976).
within the natural population and it may cause an adaptation or even an adaptive radiation.
Introgression can happen across zones that are hybrid because of chance, zone movement or
haphazard sampling. The genetic material within an offspring are a concoction of those within
the parents, and chance is the determinant of whether a certain offspring will survive and
Make a reasonable and realistic brood stock management plan. At all times ensure that
Ensure that you are prudent when sourcing for the brood stock since inbreeding is
accumulative.
Always practice good husbandry upon arrival to the hatchery to eliminate the
possibility of an illness flare up, minimize the mortality rate, and maximize the
Come up with a brood stock program, which segregates the seed for future brood stock
Come up with a method that can help identify and segregate the individual fish, for
Do not use hybrid fish as part of the brood stock. You can only use hybrid fish if it is
Carry out fish spawning for the entire duration of breeding to eliminate the possibility
The farm will utilize the tag and segregation system as a way of eliminating the
possible genetic degradation. The farm will also commit to not getting hybrid as part of the
brood stock as that would cause genetic degradation of the fish. Spawning will also be carried
out during the entire period of spawning (Pazi, Tolga Gonul, & Kucuksezgin, 2019).
Preventing genetic drift
As noted earlier in the earlier paragraph, genetic drift and inbreeding depression are conjoined
devils, which usually happen in an enclosed hatchery population. Since they are connected, it
is crucial to know that managing one will automatically lead to the control of the other
(Gitterle et al., 2006). In situations where this fails to occur, a sixty second alteration in
administration goals will curb these problems from seriously impacting on progress.
It is hard to curb genetic drift. Genetic drift happens due to sampling error. The known
way of curbing sampling error is to bring on board an infinitely large population, something
which is next to impossible. In fish farming, the sampling error is attributed to the choice of
brood fish, which are permitted to spawn and bring forth young ones or acquire fish from the
to curb unwarranted inbreeding from messing up profits, must control and regulate the
population in order to hinder genetic drift from stealing the genetic variance of the population.
Overseeing a pond to contain genetic drift can be translated to mean that a farmer is
mandated to choose the amount of genetic drift that is allowed. Because the genetic drift
The answer to this particular question lies in answering the following two questions.
First, what is the value of the rare alleles? Second, what assurance of sparing these alleles is
wanted? The explanation these choices must be made is on the grounds that the main way the
loss of alleles can be forestalled and the only way a 100% assurance can be given that alleles
were not lost by means of genetic drift is to have a vastly enormous population. The
population in the hatchery is quite small, hence, the only way one can manage to curtail
genetic drift from reigning supreme is by making a compromise between what is good and
that which can be realized. Geneticists expect that a gene has more than one allele and if the
recurrence of two alleles are more prominent than 0.01 and this implies the quality is
polymorphic. A polymorphic gene implies that at least two alleles can be found for that
Hence, a farmer who wishes to conserve a huge fraction of the genetic variance and is
willing to take a little hazard would decide to spare alleles whose frequencies are 0.01.
Managers who perceive that uncommon alleles are not that significant for cultivating
Another way of mitigating inbreeding effects on genetic drift is to spawn more fish than
required. Numerous hatchery directors have been prepared to be effective, and this implies
spawning the least number of fish that will empower them to meet creation objectives.
Managers need to be productive with the goal that they go through less cash raising their yield
(Gitterle et al., 2006). Besides, one way hatchery supervisors at open incubation centers are
This issue is intense in the field of fish-rearing, since the fertility of certain types of
fish is so colossal, which makes it is frequently conceivable to spawn and produce the
quantity of fingerlings that are required for develop out. However, the capacity to spawn
generally hardly any fish must be controlled if genetic drift and inbreeding are to be regulated.
The most suitable method of managing a school of fish is determining the value of Ne
required to curb genetic drift and inbreeding depression types of problem under a given time
frame, which has been picked and afterward spawn the quantity of brood fish that will
empower the manager to deliver that Ne. The hatchery manager has a mandate of spawning
surplus fish than usual so that he keeps a minute and equal haphazard sample of eggs for
every spawn.
Spawn a progressively equivalent sex ratio
Another simple method of incrementing Ne and decreasing the genetic rate of drift and
inbreeding is to spawn a more equivalent sex proportion. Many fish-cultivators use distorted
and biased sex proportions when they spawn their fish. This is done in light of the fact that
one male can for the most part be utilized to prepare eggs from a few females. This empowers
farmers to use fewer males and this leads to lower cost of production. This is a great idea
when it comes to efficiency, but a poor one if you wish to control and regulate the
Genetic intervention
Genetic intervention is utilized in enhancing the production of animals and plants. This
approach has been utilized in aquaculture to help overcome numerous distinct challenges.
Unfortunately, in recent days, the work of geneticists have been put under scrutiny, hence
making it hard for them to choose on the strategies to choose. Genetics in the field of
reliable aquaculture development. The overexploitation of the world stocks is making genetic
improvement quite relevant. According to Kincaid (1983a), the selection of body weight and
sustainability and efficiency of the hatchery operation for the species of choice?
In fish-farming, gradual degradation of the brood stock is expected to happen as they are
progressively cut off from the wild’s replacement opportunities. Hence, to maintain viability
and sustainability, the brood stock requires to be genetically managed. But aquaculture is a
robust field with hundreds of species, hence, a unified genetic technique is impossible
(Gitterle et al., 2006). Unfortunately, the use of sophisticated technology in stock
improvement, is quite an expensive endeavor that individual farmers are unable to undertake.
This means that the government has to chip in and help the fish farmers.
production and also making it efficient. Genetics have the following application in the field of
fish farming;
a) Manage farmed stock by applying genetic principles to ensure the traits desired are
retained.
b) Improve the desired attributes and their frequency, for example, resistance to diseases,
c) Control and regulate the genetic integrity of the brood stock for purposes of
restoration.
e) And to also help establish an origin of stocks to help confirm propriety origin of the
genetic resources.
sustenance, it will in time become detrimental if it keeps being practiced on juvenile fish
production for restocking purposes of natural water bodies (Gitterle et al., 2006). Actually,
intra species genetic diversity is key for ensuring that a wide genetic set is availed in support
It is important to take cognizance of the fact that, attempts to enhance farmed fish
stocks through the application of genetic principles for targeted species with established
farming technologies is relatively recent. But several programs have been undertaken to help
percent of the production comes from selective breeding, the field can rise by more than 2
percent in a single year due to genetic gain (Gjedrem, 2012). Genetic gain survival related
traits has a positive impact on production, and will eventually lead to faster growth of this
sector.
requires a period of 18 to 24 months to achieve the commercial size (Naish et al., 2007).
for it to be realized. The sea bass is faced by serious diseases like the viral nervous necrosis
but it does not have a vaccine, and hence coming up with a breed that is resistant to diseases
Profitability: extrapolating the current trends in Turkish aquaculture then we can safely
conclude that, with genetic manipulation and improvements, aquaculture will get more and
more profitable (Gjedrem, 2012). This is because the selective breeding schemes will be
expanded to address disease resistance, fish farming will be moved to exposed locations, and
better feed will help the fish grow faster and bigger.
Biological and physical containment: genetic principles should also be utilized in drastically
decreasing the fitness of cultured fish, should they escape to the environment. From literature,
it is quite evident that transgenic fish are high-risk when released to the environment
(Vandeputte et al., 2017). Hence, one of the job would be crippling the fish that may escape.
It is crucial to take cognizance of the fact that, there is small value in embarking on a
genetic selection program to ensure sustainability of production if a sound genetic brood stock
ALA‐HONKOLA, O., Uddström, A., Pauli, B.D. and Lindström, K., 2009. Strong inbreeding
Alder, J. and Pauly, D., 2008. A comparative assessment of biodiversity, fisheries, and
Alp Publishing.
Barboza, L.G.A., Vieira, L.R., Branco, V., Figueiredo, N., Carvalho, F., Carvalho, C. and
Guilhermino, L., 2018. Micro plastics cause neurotoxicity, oxidative damage and
European sea bass, Dicentrarchus labrax (Linnaeus, 1758). Aquatic Toxicology, 195,
pp.49-57.
Christie, Mark R., Melanie L. Marine, and Rod A. French. "Genetic adaptation to captivity
Colakoglu, F.A., Kunili, I.E., Ormanci, H.B., Cakir, F. and Ismen, A., 2018, February. The
Demirbaş¹, N., Niyaz, Ö.C. and Apaydın, Y.M., 2016. Family Farming In Terms Of
Sustainable Food Supply and Evaluation of the Present Situation in Turkey. Animal
Ertör, I. and Ortega‐Cerdà, M., 2019. The expansion of intensive marine aquaculture in
pp.337-360.
FAO. IV. Seed Production and Hatchery Techniques. Table 6. Monthly fish eff production
and hatching rate of sea bass by environmental manipulation at Satul Fisheries Station,
Fırat, K., Saka, S. (2006): Levrek (Dicentrarchus labrax lin., 1758) balığını biyolojisi ve
tarim.gov.tr/arayuz/10/icerik.asp?Efl=uretim/suurunleri/suurunleri.htm&curdir=
Fırat, K., Saka, Ş. and Çoban, D., 2004. Türkiye'deki Levrek (Dicentrarchus labrax L., 1758)
Gasco, L., Henry, M., Piccolo, G., Marono, S., Gai, F., Renna, M., Lussiana, C.,
Antonopoulou, E., Mola, P. and Chatzifotis, S., 2016. Tenebrio molitor meal in diets
for European sea bass (Dicentrarchus labrax L.) juveniles: growth performance, whole
body composition and in vivo apparent digestibility. Animal Feed Science and
Gitterle, T., Johansen, H., Erazo, C., Lozano, C., Cock, J., Salazar, M. & Rye, M. (2006).
Response to multi-trait selection for harvest weight, overall survival, and resistance to
Association for Genetics in Aquaculture Abstract: 35. 26–30 June 2006, Montpellier.
Gjedrem, T., 2012. Genetic improvement for the development of efficient global aquaculture:
Henry, M.A., Gasco, L., Chatzifotis, S. and Piccolo, G., 2018. Does dietary insect meal affect
the fish immune system? The case of mealworm, Tenebrio molitor on European sea
209.
Islam, M. J., Kunzmann, A., Bögner, M., Meyer, A., Thiele, R., & Slater, M. J. (2020).
Metabolic and molecular stress responses of European sea bass, Dicentrarchus labrax
Kayıs, S., 2019. Analysis of fish health status in terms of sustainability of aquaculture in
Kayhan, M.H. and Ölmez, M., 2014. Aquaculture and organic aquaculture in Turkey. Journal
of Aquaculture, 5(5).
Kennedy, M., Fitzmaurice, P., (1972). The biology of the sea bass (Dicentrrachus labrax, in
Irish waters. Journal of Marine Biological Association of the UK, 52, 557-597.
Kincaid, H.L., 1983. Inbreeding in fish populations used for aquaculture. Aquaculture, 33(1-
4), pp.215-227.
Kincaid, H.L., 1976. Effects of inbreeding on rainbow trout populations. Transactions of the
Korkut, A.Y., Kop, A., Saygi, H., Göktepe, Ç. Yedek, Y. and Kalkan, T., 2017. General
Lazard, J., Rey-Valette, H., Aubin, J., Mathé, S., Chia, E., Caruso, D., Mikolasek, O.,
Blancheton, J.P., Legendre, M., Baruthio, A. and Rene, F., 2011. Evaluation of
Magalhães, R., Sánchez-López, A., Leal, R.S., Martínez-Llorens, S., Oliva-Teles, A. and
Peres, H., 2017. Black soldier fly (Hermetia illucens) pre-pupae meal as a fish meal
replacement in diets for European sea bass (Dicentrarchus labrax). Aquaculture, 476,
pp.79-85.
Massa, F., Onofri, L. and Fezzardi, D., 2017. Aquaculture in the Mediterranean and the Black
Ürünleri Fakültesi Yayınları, İstanbul, Türkiye/ Marine Fish Breeding Course Book.
Mrakovčič, M. and Haley, L.E., 1979. Inbreeding depression in the Zebra fish Brachydanio
Naish, Kerry A., Joseph E. Taylor III, Phillip S. Levin, Thomas P. Quinn, James R. Winton,
Daniel Huppert, and Ray Hilborn. "An evaluation of the effects of conservation and
Pazi, I., Tolga Gonul, L. and Kucuksezgin, F., 2019. Sources and Characterization of
Aquaculture Sites from Eastern Aegean Coast. Polycyclic Aromatic Compounds, pp.1-
15
Peda, C., Caccamo, L., Fossi, M.C., Gai, F., Andaloro, F., Genovese, L., Perdichizzi, A.,
Romeo, T. and Maricchiolo, G., 2016. Intestinal alterations in European sea bass
Reyes-López, F.E., Aerts, J., Vallejos-Vidal, E., Ampe, B., Dierckens, K., Tort, L. and
Sargent, J.R., Bromage, N.R. and Roberts, R.J., 1995. Brood stock management and egg and
larval quality. By. NR Bromage and RJ Roberts), Blackwell Science, London, pp.353-
372.
Vandeputte, Marc, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, Gilles Breuil, and
François Allal. "Genetic variation of resistance to Viral Nervous Necrosis and genetic
correlations with production traits in wild populations of the European sea bass
Yildirim, P., Ercan, E. and Türker, G., 2018. Organic Aquaculture Production in Turkey: A