Coconut Genetic Resources
Coconut Genetic Resources
Coconut Genetic Resources
Resources
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COCONUT GENETIC RESOURCES
Citation:
Batugal, P, V Ramanatha Rao and J Oliver, editors. 2005. Coconut Genetic Resources.
International Plant Genetic Resources Institute – Regional Office for Asia, the Pacific
and Oceania (IPGRI-APO), Serdang, Selangor DE, Malaysia.
ISBN 92-9043-629-8
IPGRI-APO
PO Box 236, UPM Post Office
Serdang 43400 Selangor Darul Ehsan, Malaysia
ii
Contents
Contents
Foreword x
Introduction xii
iii
COCONUT GENETIC RESOURCES
iv
Contents
v
COCONUT GENETIC RESOURCES
Pest risk analysis and guidelines for the safe movement 411
of germplasm in the International Coconut
Genebank of Asia and the Pacific
R Ikin
vi
Contents
South Asia
India 573
V Rajagopal, PM Kumaran, S Arulraj and V
Arunachalam
Bangladesh 596
SA Bhuiyan, A Rashid, Md Nazirul Islam and BC
Sarker
Pakistan 604
M Hashim Laghari and AH Solangi
vii
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Thailand 618
P Naka and K Jayashree
Vietnam
VV Long 625
Malaysia 634
AW Fong, N Kalitu and K Jayashree
Philippines 639
C Carpio, E Manohar, E Rillo, C Cueto, O Orense,
MB Areza-Ubaldo and AR Alfiler
China 648
L Tang and Z Ma
Ghana 661
SK Dery, J Owusu Nipah and F Ofori
Nigeria 667
CO Okwuagwu
Tanzania 670
AK Kullaya
Kenya 682
FK Muniu and PK Kibet
Mozambique 688
JS Cumbi
Seychelles 691
AM Moustache
viii
Contents
Mexico 704
R Gonzalez and C Oropeza
Guyana 709
O Homenauth
Jamaica 715
B Been
South Pacific
Cook Islands 720
W Wigmore and T Mataora
Fiji 725
V Kumar and T Kete
Kiribati 732
M Tenang
Samoa 744
A Peters and K Jayashree
Tonga 748
P Taufatofua and K Jayashree
Vanuatu 750
JP Labouisse and J Lahva
Index 762
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COCONUT GENETIC RESOURCES
Foreword
x
Foreword
Emile Frison
Director General
International Plant Genetic Resources Institute
xi
COCONUT GENETIC RESOURCES
Introduction
xii
Introduction
xiii
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The editors
xiv
Chapter 1
An introduction to the
coconut palm
xv
COCONUT GENETIC RESOURCES
xvi
CHAPTER 1: An introduction to the coconut palm
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COCONUT GENETIC RESOURCES
Taxonomy
The Cocos genus is mono-specific, showing recognition by taxonomists
that it has no close botanical ‘relatives’. The palm known as the ‘double
coconut’ or ‘coco de mer’ (coconut of the sea) produces a fruit that bears
some slight resemblance to the coconut, however, it is many times larger
and is very different for all other traits (morphology and phenology).
The coconut is placed in the Arecaceae family (formerly Palmaceae) and
the sub-family Cocoideae which has 27 genera and 600 species (Teulat et
al. 2000).
The coconut has 32 chromosomes (16 pairs) and may be divided into
two distinct groups - Tall and Dwarf, with a further division within the
Dwarf group between forms with either fragile or robust trunks. The
Tall, in general, is allogamous(out-breeding) because even though the
male and female flowers are located close together on each inflorescence,
the pollen is shed before the females are ready for it. The fragile Dwarf is
mostly autogamous because the male flowers shed pollen freely while
the female flowers are receptive. The Dwarf group that possesses a robust
trunk and is less precocious that the fragile Dwarf has flower behaviour
similar to the Tall. There are no reports of incompatibility between any
paired individuals or populations. Tall and fragile Dwarf palms cross
readily to produce vigorous and fertile hybrids.
Diversity
The confinement in nature of the coconut palm close to the strand
environment described in the evolution section has placed narrow limits
upon its many morphological and some phenological characters.
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CHAPTER 1: An introduction to the coconut palm
Ethnobotany
This section overlaps somewhat with that on genetic diversity, dealing
in more depth with the targeting of specific traits selected to serve for
human purposes at the local level, and also in developing or expanding
a promising wider market for a coconut product.
Whereas, Dwarf populations are distinctive and uniform at the local
level with respect to fruit morphology and colour, Tall populations
generally look pretty much the same all over the world. Extremes of fruit
size are noticeable but otherwise there is usually, within any group of
palms, a great diversity of colour, fruit shape and size, whilst palm crown
morphology is mostly a matter of age and nutritional status.
Ethnobotanical traits (those sought by humans) are elusive in Tall palms
because of the lack of markers already noted, and because of the
predominant outbreeding behaviour.
Unlike inbreeding species such as wheat, rice or sorghum for example,
where the selection of a distinctive individual plant offers the opportunity
for the traits of that plant to be preserved securely in its progeny, in the
Tall coconut a valuable trait identified in a single palm can prove difficult
to multiply because of the genetic diversity in which it is embedded.
Preservation of traits is much simpler in the Dwarf, suggesting that effort
might be made to assist in the transfer of particularly interesting traits
such a special aroma, or edibility of the immature husk, from Tall to
Dwarf.
In general, the coconut is not rich in distinct ethnobotanical traits
that are of great commercial value. The relative genetic uniformity of the
species compared to most crop plants that have emerged from regions
that encompass great biophysical diversity confines coconut to a narrow
range of variants. Little variation in the qualities of the fibre, shell, kernel
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COCONUT GENETIC RESOURCES
and water has been demonstrated. There is on the other hand great ethnic
diversity in the ways that the various coconut resources are produced
and used. It is ethno-industry more than ethno-botany that gives rise to
the great range of products derived especially from the fibre and shell
including exquisitely crafted works or art and many materials of great
commercial value.
Distribution
The natural dispersal of the coconut prior to the colonisation of the entire
planet by humans has been dealt with above, but the historic distribution
that was limited by the ‘reach’ of viable seeds floating on the ocean has
been enormously expanded in recent millennia. Expansion inland from
the natural coastal ‘foothold’ has been responsible for a great increase in
coconut populations as human populations grew, and there has also
been, quite recently, expansion to new lands previously not colonised by
the wild coconut.
An interesting aspect of coconut distribution arises from the evidence
of widespread ‘invasion’ of natural coconut habitats by human settlers.
Many coconut populations exhibit a degree of shift from the
characteristics of formerly wild coconut populations (attributed to
introgression between two populations of different origin – the wild one
and the introduced one) that would have taken many generations to
achieve.
Except for a small number of atolls, where human settlement
apparently never took place, or where it was very recent indeed (as for
example the Cocos (Keeling) Islands settled in 1827), coconut populations
from Asia to the eastern Pacific show signs of introgression between wild
and ‘domesticated’ variants. The degree of drift in fruit morphology away
from the classical wild traits varies greatly, being most marked in some
relatively isolated Polynesian islands such as Rennell in Solomon Islands
and Rotuma in Fiji Islands. It is likely that the wild population of coconut
palms before the arrival of the Polynesian colonisers (which is known to
have been at least 1000 years ago) was quite small, as the rocky coasts of
these two islands possess only a few sandy berms where wild palms
would have been growing. The genetic traits of the palms planted by the
colonisers therefore became dominant within a few generations through
a combination of relatively little dilution by the wild genotype and
purposeful selection by the people.
The final ‘coconut-free zone’ of the earth, being the tropical shores of
the Atlantic Ocean, was ‘invaded’ very early in the 16th century by the
introduction of seeds from the Indian Ocean shores, brought there by
Portuguese navigators returning from voyages in the Indian Ocean. From
a base in the Cape Verde Islands (close to the coast of Senegal), seeds
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CHAPTER 1: An introduction to the coconut palm
were distributed within a few decades to all the new colonies in the
tropical Americas. However, there was already a coconut population on
the Pacific coast of Central America with nut characters inconsistent
with dispersal from the ocean. One could speculate that the seeds which
founded that population had originally arrived by boat prior to the entry
of European navigators into the Pacific, from a source in Polynesia.
By the end of the 16th century, the coconut could be found throughout
the tropics with one notable exception. The tropical coast of Australia
was as yet unknown to European navigators, but even when it was
charted – mostly in the early 19th century - there was no sign of the coconut
palm. A tiny population was later found (in 1848) on an offshore island,
during intense local mapping of the northeast coast and the barrier reef.
The possible reasons for this strange absence could be attributed to a
combination of the consumption of drifted fruit for food by both native
people, and also by a particular species of native rat capable of opening
a mature fruit with ease (Foale 2003).
The coconut can now be found on practically every suitable tropical
and sub-tropical coastline worldwide, and has been transported far from
the coast in many regions, wherever rainfall is adequate and the altitude
does not exceed 1000 m. Although one would expect a species whose
native habitat is at the very edge of the ocean to be “ecologically
challenged” elsewhere, the coconut has shown a remarkable capacity to
thrive on soil textures that range from coarse sand, like that of the berm
on the coast, to heavy-textured clay. Certain essential nutrients constrain
success of the coconut by their absence, and particular mention should
be made of chlorine because its importance to the coconut is less well
known compared with the usual major nutrients. Whilst chlorine is
generally abundant near the coast, there are many sub-coastal and inland
areas where the leaching action of intense rainfall has reduced chlorine
availability to the point where it limits coconut growth.
In the era of great industrial use of the coconut, commencing in the
middle of the 19th century, coconut distribution became much broader as
plantations were successfully established on hundreds of thousands of
hectares of land previously occupied by rainforest. Provided that the
annual rainfall totalled at least 2000 mm, and the season of severe water
deficit did not exceed three months duration, the coconut prospered.
Many biotic and nutritional challenges were encountered away from
the coast but in general, these were overcome and the plantations were
productive and profitable for up to 100 years. It has been economic rather
than ecological factors that have placed constraints on the distribution
of the coconut in recent decades.
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COCONUT GENETIC RESOURCES
References
Ashburner, GR. 1995. Characterisation, collection and conservation of Cocos nucifera
L. in the South Pacific. PhD thesis, The University of Melbourne.
Foale, MA. 2003. The coconut odyssey: The bounteous possibilities of the Tree of
Life. ACIAR Monograph No. 101, 132 p.
Foale, MA. and RA Ashburner. 2003. The coconut palm. Pp. 35-40. In: Plantation
crops. In: Series on the impact of biotechnology on agricultural crops. Indian
Council for Agricultural Research, New Delhi and Howarth Press, New York.
Teulat, B, C Aldam, R Trehin, P Lebrun, JHA Barker, GM Arnold, A Karp, L Baudouin
and F Rognon. 2000. Analysis of genetic diversity in coconut (Cocos nucifera L.)
populations from across the geographic range using sequence-tagged
microsatellites (SSRs) And RFLPs. Theoretical Applied Genetics. 100: 764-771
Foale, M. 2004. The coconut palm: Origin and evolutionary history (in press). In: VL
Chopra and KV Peter (eds). Handbook of industrial crops. Haworth Press,
Haworth, UK.
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CHAPTER 1: An introduction to the coconut palm
Cultivar/Variety/Ecotype/Population/Variant
Definitions:
‘True’ variety: from a strict botanical point of view, there are only three
main varieties in coconut:
• Tall : high height increment, spaced leaf scars, predominantly
allogamous, late bearing.
• Dwarf: reduced height, narrow spacing between leaf scars, pre-
dominantly autogamous, precocious.
• A few intermediate and other types of coconut, such as Niu leka
Dwarf (Polynesia) and King Coconut of Sri Lanka.
Variant could be preferred for special botanical types which may be found
in different cultivar: Makapuno/Kopyor/Coco Gras/Dikiri or Spicata.
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COCONUT GENETIC RESOURCES
“True” varieties:
• Tall : rapid height increment, widely spaced leaf scars, predominantly
allogamous, late flowering and bearing.
• Fragile Dwarf: reduced height, narrow spacing between leaf scars,
trunk diameter about 40% less that Tall, little of no basal bole, pre-
dominantly autogamous, precocious (early flowering and bearing).
• Robust Dwarf: Very low rate of trunk extension, trunk diameter and
flowering behaviour similar to Tall, crown more compact than that
of Tall or Fragile Dwarf
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CHAPTER 1: An introduction to the coconut palm
Chapter 2
Locating and collecting
germplasm
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CHAPTER 2: Locating and collecting germplasm
Introduction
Cocos is a genus in the family Arecaceae (Palmaceae), subfamily Cocoideae,
which includes 27 genera and 600 species. Distributed mainly in coastal
regions between 20° N and 20° S, from sea level to 1000 m asl, the coconut
– Cocos nucifera L. (2n = 2x = 32) – the only species in the genus, is an
important perennial tropical plantation crop with no known truly wild
forms.
The variability of local coconut types is reported to be highest in
Southeast Asia (Whitehead 1976). However, it has not been possible to
establish either a true centre of diversity or centre of origin for the species.
These simple but basic factors are of great importance for understanding
the extent and distribution of coconut genetic diversity and for locating
useful variation.
In 1992, the International Plant Genetic Resources Institute (IPGRI),
with the endorsement of the Consultative Group on International
Agricultural Research (CGIAR) and its donors, established the
International Coconut Genetic Resources Network (COGENT) with the
aim of promoting an international collaborative programme on the
conservation and use of coconut genetic resources. Collecting, conserving,
evaluating and enhancing coconut germplasm of member countries, and
locating and characterizing genetic diversity using morphometric and
molecular biology techniques, have been some of COGENT’s major
concerns (http://www.ipgri.cgiar.org/networks/cogent). Under the
auspices of COGENT, the activities related to genetic resources collection
and genetic diversity in coconut have been streamlined and significant
progress in these areas has been made.
Genetic diversity
Genetic diversity is usually thought of as the amount of genetic variability
among individuals of a variety, or population of a species (Brown 1983).
It results from the many genetic differences between individuals and may
be manifest in differences in DNA sequence, in biochemical characteristics
(e.g. in protein structure or isoenzyme properties), in physiological
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Use of Isozymes
This method of genetic variability evaluation is barely developed for
coconut. The initial study, undertaken with pollen involved nine enzyme
systems (Benoit and Ghesquiere 1984; 1989). After several technical
difficulties, only four systems were used to compare eight ecotypes:
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CHAPTER 2: Locating and collecting germplasm
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Use of polyphenols
The analysis of the polymorphism based on the analysis of leaf polyphenol
using High Performance Liquid Chromatography (HPLC) provided an
original approach to the study of genetic diversity in numerous plant
species. The first analysis on coconut has involved the measurement of
16 sufficiently individualized peaks or major items of chromatographic
information, each corresponding to a molecule or a few molecules of
strong structural affinity (Jay et al. 1989). From 32 ecotypes, 171 palms
were sampled in the collection of the Marc Delorme Station in Côte
d’Ivoire. The data were subjected to multivariate analysis. The first
discriminant analysis showed a clear distinction between Dwarfs and
Talls. Only 19 out of 171 individual palms showed atypical behaviour.
Certain Tall trees of various ecotypes behaved like Dwarfs: AGT, MLT,
RGT, TAGT, RIT, TAT, WAT, PNTO1; while one NLAD tree behaved
like a Tall. Most Dwarfs presented common characteristics that clearly
distinguished them from Talls as shown in the morphologic and
polyphenol analyses.
The second analysis consisted of a canonical analysis per ecotype.
Data analysis favoured the differences between ecotypes at the expense
of intra-ecotype variability. Classification within this analysis was not
based on geographic groups; the image obtained, however, permits such
an interpretation. Five groups were recognized to classify the collection
of the Marc Delorme station: Pacific, Far East, Indian Ocean, Africa and
America, the last one being represented by only one ecotype. Among the
Tall ecotypes, the representation permitted the determination of three
distinct groups corresponding to the Pacific, the Far East and Africa.
The ecotypes of the Indian Ocean may be divided between the African
and the Far East groups. Certain points precisely strengthen the historical
hypothesis. The Ghana Yellow Dwarf (GYD) and Malayan Yellow Dwarf
(MYD) are very close, confirming the old hypothesis that the Yellow
Dwarf was introduced from Malaysia into Africa during the time of the
British colonial rule. Anyway, with the advent of DNA marker
technology, the characterization of genetic diversity in coconut germplasm
at the DNA level has recently begun to substitute other strategies like
isozyme or leaf polyphenol analysis.
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CHAPTER 2: Locating and collecting germplasm
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COCONUT GENETIC RESOURCES
techniques helps deal with the physical problems of collecting large nuts
but the logistical requirements still remain labour intensive and expensive.
Currently, fruit component analysis coupled with observing a few other
characteristics at the time of collecting are used to get some idea on the
population variability at the time of collecting (see Bourdeix et al. in
Chapter 2). However, this approach does not really give a measure of
the genetic diversity that is being sampled.
It was argued that molecular methods based on field collected tissue
samples (Adams 1992) provided an efficient way of optimising the
diversity collected and minimizing the numbers of new samples that had
to be maintained in field gene banks. For this reason, over the last few
years, COGENT and a number of other donors have supported the
development of a molecular marker kit for coconut.
The Bureau for the Development of Research on Tropical Perennial
Oil Crops (BUROTROP) and IPGRI/COGENT supported the research
by Centre de Cooperation Internationale en Researche Agronomique
pour de Developpment (CIRAD) France, with participation from IACR
Long Ashton (UK), on developing a microsatellite marker kit and
dedicated software for developing countries. As a result, the kit, consisting
of 14 microsatellite loci, was developed and tested on 681 coconut palms
representing a large range of diversity. A statistical method was devised
to identify any small set of individual palms of the same, unknown origin.
The method allows the user to compare this sample with a set of reference
populations and to rank these populations in order of decreasing
probabilities of being the origin of the sample. It is a very efficient tool for
diversity studies and identification of germplasm accessions. The transfer
of this technology to the countries where the coconut germplasm
collections are located will improve efficiency and reduce the cost of
conserving, characterizing, managing and utilizing germplasm accessions
for breeding improved varieties (see also Chapter 4 by Lebrun et al.).
To downstream this technology to developing countries, 18 trainees
from Brazil, India, Indonesia, Papua New Guinea, Mexico, Côte d’Ivoire,
the Philippines, Portugal and Tanzania participated in a workshop on
“Coconut Genetic Resources Management Using a Microsatellite Kit and
Dedicated Software” held at CIRAD in Montpellier, France on 15-24
April 2002. Specialists from CIRAD managed the workshop while other
specialists from partner institutions, consisting of nine molecular biologists
and nine collection managers (representing a team of two participants
per country) participated in the activity. The workshop was supported
by IPGRI/COGENT, Common Fund for Commodities (CFC), the
European Union, BUROTROP and CIRAD.
Thus, there is now a tool kit available for estimating the genetic
diversity prior to collecting to facilitate the locating of germplasm and
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CHAPTER 2: Locating and collecting germplasm
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COCONUT GENETIC RESOURCES
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CHAPTER 2: Locating and collecting germplasm
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Conclusion
Locating, maintaining and using genetic diversity of coconut present
substantial challenges given the wide dispersal of the species, the limited
knowledge of the history of that dispersion and of the current extent and
distribution of diversity. The logistical problems conservers and users face
when dealing with a perennial species with large recalcitrant seeds added
to the complexity of managing coconut germplasm. However, in recent
years, substantial progress has been made, at least in part, through the
strong support of COGENT partners by establishing an effective
framework of knowledge on which to base their activities.
Certain general features of the species seem to be important in
understanding the picture that is emerging from recent studies. These
include the lack of a related wild genepool, small founding populations,
human involvement in the selection and spread of the species/cultivars,
outbreeding and intercrossing among populations of Talls and low but
continuing gene migration among wild type or distant populations. These
characteristics provide a general framework for analyzing the data that
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CHAPTER 2: Locating and collecting germplasm
References
Adams, RP, N Do and C Ge-lin. 1992. Preservation of DNA in plant
specimens from tropical species by desiccation. Pp. 153-181 In: RP
Adams and JE Adams (eds). Conservation of plant genes. In: DNA
banking and in vitro biotechnology. Academic Press Inc., San Diego,
USA.
Akpan, EEJ. 1994. Evaluation of tall coconut genotypes within Nigerian
coconut germplasm bank. Oleagineux 49:13-20.
Antonovics, J. 1968. Evolution in closely adjacent plant populations. VI.
Manifold effects of gene flow. Heredity 23:507-524.
Ashburner, G.R. and W. Rohde. 1994. Coconut germplasm
characterization using DNA marker technology. Pp. 44-46 In: MA
Foale and PW Lynch (eds). Coconut improvement in the South Pacific.
Proceedings of a workshop held in Taveuni, Fiji Islands. 10-12
November 1993. ACIAR, Canberra.
Asmono, D, A Hartana, E Guhardja and S Yahya. 1993. Genetic diversity
and similarity of 35 coconut populations based on isoenzyme banding
pattern analysis. Buletin Pusat Penelitian Kepala Sawit 1, 1: 39-54.
Beckmann, JS and M Soller. 1986. Restriction fragment length
polymorphisms and genetic improvement of agricultural species.
Euphytica 35: 111-124.
Benoit, H. 1979. Isozymic variation within and between coconut
populations. Paper presented during the 50th session of the FAO
Technical Working Party on coconut production, protection and
processing, Manila, 3-8 December 1979.
Benoit H. and M Ghesquière. 1984. Electrophorèse, compte rendu cocotier.
IV. Déterminisme génétique. Rapport interne IRHO, CIRAD, (FRA).
11 p.
Bourdeix, R, L Baudouin, J Ollivier and JP Labouisse. 1999. Consultancy
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Introduction
Mapping of coconut genetic diversity means representing any
characteristic of coconut populations on maps, be it their phenotypic or
molecular traits; and then studying the links between these traits and
any other useful spatial information. According to the needs, the cultivars
may be related to their site of origin or to the genebank where they are
conserved. This type of analysis can improve the effectiveness of collecting,
conservation, management and use of coconut genetic diversity.
The mapping studies conducted so far have used data on accessions
already collected and conserved in germplasm banks around the world.
The latitude and longitude of collection sites have been entered into
databases and checked. Then the localities of collection sites are mapped
to locate under-represented areas, i.e. areas in which the coconut palms
can potentially grow, but where collecting has been inadequate or has
not occurred at all. Subsequently, it is possible to identify hotspots of
diversity and investigate the geographic distribution of specific traits or
combinations of traits using information such as characterization and
evaluation, including molecular markers, of the available genetic
resources.
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COCONUT GENETIC RESOURCES
This search process will take a researcher at least 15 minutes, and it will
require some luck for complete success. Just one piece of information
missing in the whole line and, it becomes difficult to make the links.
Another option available in CGRD consists in searching directly all the
accessions of ‘Tacunan Green Dwarf’ registered worldwide, but even
this does not solve the problem. Both descriptors list and dedicated
software have been conceived for managing complete information, and
therefore become inefficient if information is incomplete. Data regarding
the collection site of the original sample should be recorded in the passport
data of each accession.
Nevertheless, the status of georeferencing of coconut accessions (Table
1) compares favourably with other crops. In the CGRD, 74% of the
accessions have latitude and longitude information. As there are 1402
accessions but only 710 distinct cultivars/population names, it can be
said that more than 80% of the coconut cultivars of the world’s germplasm
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CHAPTER 2: Locating and collecting germplasm
The first mapping was done using the Map module of the Corel Quattro-
Pro Software (Bourdeix et al. 1999). The data obtained were checked to
detect and correct abnormal localizations. As many island countries were
involved, a very convenient test was to detect errors such as accessions
which appear to have been collected in the open sea (‘sea coconuts’).
Sometimes the commercial maps were inaccurate and had to be changed.
Lists of errors and corrections were exchanged a number of times with
most of the countries in order to reach an acceptable level of precision.
This work has not yet been systematically conducted on the entire
database. The number of coconut accessions registered in the CGRD
database increased from 665 in 1994-1995 to more than 1400 as of 2003.
No checking of geographical coordinates was done after 1999 at the
database level. There is thus a need to continue this work more efficiently.
The International Plant Genetic Resources Institute (IPGRI) and the
International Potato Center (CIP) collaborated and developed specialized
GIS software called DIVA-GIS that could be downloaded free from
Internet at http://diva-gis.org/. DIVA-GIS is dedicated to the analysis
of genebank and herbarium databases to elucidate genetic, ecological
and geographic patterns in the distribution of crops and wild species.
The maps in Figures 1, 2 and 3 have been made using the 579 locations
where coconut accessions have been collected. Climatic information from
35
COCONUT GENETIC RESOURCES
Figure 1. Mapping of the locations where coconut accessions were collected in Asia and the
Pacific regions.
Figure 2. Mapping of the locations where coconut accessions were collected in Africa
and Indian Ocean regions.
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CHAPTER 2: Locating and collecting germplasm
Figure 3. Mapping of the locations where coconut accessions were collected in America.
germplasm centres. These are areas where coconut palm can grow, but
where there are no accession points recorded. For details of this analysis
see Chapter 2 on ‘Status, gaps and strategy in coconut germplasm
collecting’.
37
COCONUT GENETIC RESOURCES
divided by the weight of the fruit without free water (coconut water
inside the nut). The quantity of free water is quite variable according to
environmental factors (such as rainfall) and the degree of maturity of
the fruit. This is the reason why the Q factor is calculated without taking
into account the free water. The larger the Q factor, the higher the
proportion of husk in the fruit.
Normally, to get a good estimate of fruit composition, a sample of
two fruits is analyzed six times a year over four years on each palm, and
this must be done on 30 palms to characterize an accession. In CGRD
version 5.0, only 32% of the accessions have data for fruit component
analysis. But in practice, the data are even less complete. It can be
estimated that at least 20% of the fruit component data available in CGRD
5.0 were derived from the analysis of a single fruit sample harvested at
one point. This again reinforces the importance of having complete data
in order to carry out an analysis that can be really useful in germplasm
conservation, management and use. In any case, all the available
georeferenced accessions with fruit analysis data were used to carry out
some spatial analyses. The first results obtained were not convincing,
because they included both Tall and Dwarf cultivars, which have distinct
fruit characteristics.
Nevertheless, there was a clear geographical pattern, based on the
geographical distribution of mean values of Q factor, for Tall cultivars
(Figure 4). Accessions originating from India and Africa show a higher
Q value than accessions from Southeast Asia and the Pacific region.
0.35-0.40
0.40-0.45
0.45-0.50 Means of the Q fruit ratio
0.50-0.55
0.55-0.60
Figure 4. Geographical distribution of mean values of the Q factor for Tall cultivars
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CHAPTER 2: Locating and collecting germplasm
Figure 5. Geographical distribution of the frequency range of the allele 128 of locus
cnCir A3 in the Tall coconut varieties.
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COCONUT GENETIC RESOURCES
this country. The allele 128 frequency is 0.82, but other cultivars, with a
round nut were also sampled, which could be the result of hybridization
of local coconuts with planting material imported at different periods
from Southeast Asia.
Finally, three cultivars with allele 128 frequencies between 0.10 and
0.16 are found in the Pacific Ocean. Considering the three other
characteristic (marker) alleles, they are probably not related to the Indo-
Atlantic group. The presence of allele 128 at a low frequency in this area
is probably a case of homoplasy (i.e., the fact that similar traits – here,
fragments with the same length – appear independently by mutation in
different genetic groups). Homoplasy is not infrequent in microsatellites.
40
CHAPTER 2: Locating and collecting germplasm
Conclusion
Recent developments in GIS technology for mapping genetic diversity is
expected to contribute significantly to identify and fill the gaps in coconut
collections, enhance the effectiveness of collecting, better manage them
in field genebanks, effectively select parents from geographically distinct
regions and expand coconut production through site-genotype matching.
Figure 6 provides an analogous map of the number of accessions registered
in the germplasm banks of the COGENT member countries.
An additional effort is needed to make coconut descriptors list and
related software better adapted to management of incomplete data. The
new version of DIVA-GIS software (Version 4.0) can be downloaded
free from the internet (http://www.diva-gis.org), and is easy to learn
and use, and is tailor-made for genetic resources applications. Country-
level GIS databases can also be downloaded from this site and these
databases can be used together with the genetic resources databases that
are being mapped and analyzed. These are files with data on
administrative boundaries, country boundaries, and first and second level
administrative subdivisions for most countries. For all countries, grids
are available for altitude, land cover and population density. DIVA-GIS
can be used to check existing coordinates and carry out analyses of
characterization and evaluation data. Specific software devoted to the
management of genetic resources, such as CGRD for coconut, could be
improved by allowing easy exporting of data to DIVA-GIS.
41
COCONUT GENETIC RESOURCES
References
Baudouin, L. 2002. Study on genetic resources status in Hainan, China
(visit 12-18 December 2000). CIRAD Report (CP SIC no. 1505), France.
50p.
Bourdeix, R. 1996. Coconut germplasm in Jamaica, Mexico and Brazil.
Mission Report, March 1997. Doc CIRAD-CP no. 548, France. 53p.
Bourdeix, R. 1997a. Coconut germplasm in Tanzania, Sri Lanka and In-
dia. Mission Report, March 1997. Doc CIRAD-CP no. 739, France.
49p.
Bourdeix, R. 1997b. Actions de formation en Afrique et Amérique La-
tine/Caraïbes. Cours de formation des formateurs à l’utilisation du
manuel Stantech (Techniques Standardisées de Recherches pour
l’Amélioration du Cocotier). Mission Report, August 1997. Doc
CIRAD-CP no. 857, France. 49p.
Bourdeix, R. 1998. Coconut germplasm and breeding in Papua New
Guinea and Vanuatu. CIRAD 1997 Annual Review Report, March
1998. Doc CIRAD-CP no. 998, France. 52p.
Bourdeix, R., Y.P. N’Cho and A. Sangare. 1994. Rythmes de production
chez le cocotier Nain (Cocos nucifera L.): Etude de l’alternance
castration-production comme mode de gestion des champs
semenciers. Agronomie Africaine VI, 2:77-162.
Bourdeix, R, L Baudouin, J Ollivier and JP Labouisse. 1999. Consultancy
report on coconut collecting strategies (submitted to COGENT/IPGRI).
IPGRI, Rome.
Ferguson, ME, BV Ford-Lloyd, LD Robertson, N Maxted and HJ Newbury.
1998. Mapping the geographical distribution of genetic variation in
the genus Lens for the enhanced conservation of plant genetic diver-
sity. Molecular Ecology 7:1743-1755.
Greene, SL and T Hart. 1996. Plant genetic resources collections: An op-
portunity for the evolution of global data set. Third International
Conference/Workshop of integrating GIS and Environmental
Modeling Santa Fe, New Mexico, USA.
Guarino, L, A Jarvis, RJ Hijmans and N Maxted. 2002. Geographical
Information Systems (GIS) and the conservation and use of plant
genetic resources. Pp. 387-404. In: JMM Engels, V Ramanatha Rao,
AHD Brown and MT Jackson (eds). Managing plant genetic diver-
sity. CAB International, Wallingford.
Guarino, L. 1995. Geographic information systems and remote sensing
for the plant germplasm collector. Pp 315-328. In: L Guarino, V
Ramanatha Rao and R Reid (eds). Collecting plant genetic Diversity.
Technical Guidelines. CAB International, Wallingford.
Guarino, L, N Maxted and M Sawkins. 1999. Analysis of geo-referenced
42
CHAPTER 2: Locating and collecting germplasm
data and the conservation and use of plant genetic resources. Pp. 1-
24. In: SL Greene and L Guarino (eds). Linking genetic resources and
geography: Emerging strategies for conserving and using crop
biodiversity. CSSA Special Publication No. 27. ASA and CSSA, Madi-
son, U.S.A.
Nabhan, GP. 1991. Wild Phaseolus Ecogeography in the Sierra Madre
Occidental, Mexico. Systematic and ecogeographic studies of crop
genepools No. 5. IBPGR, Rome, Italy.
Nuce de Lamothe, MW de and F Wuidart.1982. L’observation des carac-
téristiques de développement végétatif, de floraison et de production
chez le cocotier. Oléagineux 37:290-296.
Pernès J. 1984. Gestion des ressources génétiques des plantes. Tome 2 :
Manuel. Agence de coopération culturelle et technique, Paris ISBN
92-9028-043-3, éditions Lavoisier, France.
Treweek, J. 1999. Ecological impact assessment. Blackwell Science, Ox-
ford, U.K.
Zizumbo-Villarreal, DF, R Hernandez and HC Harries. 1993. Coconut
varieties in Mexico. Economic Botany 47(1): 65-78.
43
COCONUT GENETIC RESOURCES
Introduction
The International Coconut Genetic Resources Network (COGENT)
Steering Committee decided to promote germplasm collecting in areas at
risk of genetic erosion at its first meeting in Singapore in 1992. This was
expected to fill the gaps in national collections, developing (and refining)
both morphometric and molecular markers techniques for efficiently
locating diversity and transferring efficient and practical techniques for
collecting.
Phase 1 of the COGENT project ‘Coconut Genetic Resources Network
in Asia and the Pacific Region’ was completed in July 1997. A regional
network consisting of 13 countries was established to foster the
conservation and utilization of coconut genetic resources. In December
1998, the Asian Development Bank (ADB) approved Phase 2 of the
project. Its objective was to expand the network to 20 countries, to further
promote coconut collecting and sustainable conservation, and to
strengthen human resources. During 1997-2000, many coconut accessions
were collected and planted in field genebanks in all the network member
countries. The main objective of this chapter is to review and assess the
strategies used in collecting coconut germplasm and make suggestions
for future work.
44
CHAPTER 2: Locating and collecting germplasm
to-type living palms in the field). This means either that all palms of these
accessions are dead or that data on them is missing. Information on dead
accessions is kept in the database because it remains essential to
researchers. Some general statistics on coconut collections are given
below:
• 1186 accessions have a size of one or more palms
• There are only 620 distinct names (of cultivars or populations)
• 74% of accessions are of the Tall type
• 25% are of the Dwarf type, and the remaining 1% are intermediate
forms
• 140 000 is the total number of ‘living’ palms
• The average number of palms per accession is 118 and per culti-
var, 225
• About 30% of accessions have already been duplicated in several
genebanks or rejuvenated
45
COCONUT GENETIC RESOURCES
– now Sri Lanka - in 1929. The depressed copra market of the 1930s
impeded research, and a varietal survey that began in 1939 was
terminated after only a few months (W.V.D. Pieris, personal
communication, cited by Harries 1978) and the oldest accessions are dated
1954. In Africa, the Marc Delorme Research Centre began its activities in
Côte d’Ivoire in the fifties (Nuce de Lamothe and Wuidart 1979).
Parham (1960) carried out one of the first scientific surveys intended
to collect coconut palms and breadfruit trees in the Pacific. As a result,
some coconut varieties with very large fruits, such as the Markham Valley
Tall, were introduced to various genebanks throughout the world.
Whitehead (1966) conducted a survey in the Pacific searching for varieties
tolerant to the Lethal Yellowing disease of Jamaica. An indirect result of
this work was to inspire Harries (1978) to develop his theory of evolution
and dissemination of the coconut palm. Vanuatu began its germplasm
planting in 1963 and the Philippines in 1976.
An examination of the CGRD also reveals that from 1912 to date,
there have been only 11 years during which 50 or more coconut accessions
were collected per year. Five of these 11 years were between 1992 and
1999, (i.e. during the early days of the COGENT). The other years in
which at least 50 accessions were collected, were 1981 and from 1983-
87. Around 30% of the registered accessions were planted after the
COGENT was established (1992 and later). However, no accession
acquired between 2000 and 2003 is registered in the CGRD database at
the time of writing this paper. This suggests a significant reduction in
collecting activities in the past three years.
46
CHAPTER 2: Locating and collecting germplasm
Geographical gap-filling
Most often, gap-filling collecting focuses on uncovered geographical
regions, which may be quite extensive, e.g. a whole country. Figures 1, 2
and 3 in the earlier article ‘Mapping of coconut genetic diversity’ can be
used to visualize inadequately covered geographical regions by
superimposing the theoretical coconut growing area and the location of
collection sites. The zones coloured in grey, which are climatically suitable
for coconut, do not seem to have coconut occurring in them, however,
this needs to be confirmed by ground truthing (i.e. checking in the field).
It must be noted, however, that some areas may be better represented
than they might look in these maps. For instance, India is probably better
surveyed than the map implies, but Indian researchers have not yet
inputted all the geographic coordinates of their national accessions. A
collecting mission was conducted in Madagascar in 1999 by Indian
researchers, but collecting information remains incomplete.
Some other areas are probably of low coconut diversity. For instance,
for historical reasons, there is probably a low probability of finding unique
diversity in African countries such as Congo, Democratic Republic of
Congo, Angola, Ethiopia and Sudan. The same could be true in South
America – in the central part of Brazil, and the parts of Peru and Bolivia
east of the Andes. Nevertheless, all these zones have never been surveyed
for coconut, and exploration would be justified.
Some areas remain clearly under-represented in national and
international genebanks, which are listed below, in a subjective ranking
of priority:
1. The west coast of South and Central America (except Mexico and
Panama, which have already been surveyed). Germplasm
47
COCONUT GENETIC RESOURCES
Some of the areas that are suggested here (such as Micronesia, eastern
Polynesia, and the Cocos/Keelings Islands) represent only a very small
part of the coconut world, in terms of cultivated area and economic value.
However, these areas could prove to be extremely important for coconut
diversity. Pacific Islanders, especially Polynesians, have been involved in
coconut cultivation and transportation for a very long time. Coconut
diversity is more endangered in these areas, precisely due to its
comparatively low economic importance and due to the possible effects
of global warming and other human activities.
It is interesting to note that the Arab traveller Ibn Batutta reported
the presence of coconut in Yemen in 14th century. Climate is considerably
drier at present than in antiquity (and probably than at the time of Ibn
Batutta), and Yemen is not reported as a producing country. However,
contact with local botanists could reveal the presence of a few remnants
of this historically interesting population.
48
CHAPTER 2: Locating and collecting germplasm
49
COCONUT GENETIC RESOURCES
50
CHAPTER 2: Locating and collecting germplasm
Bone Station, appeared to have been destroyed and later was no longer
considered as a coconut germplasm centre. According to Indonesian
researchers, the 41 accessions (1682 palms planted between 1984 and
1988) are considered lost. At Sikijang, at least 25 accessions, with 100
palms each, were planted in 1998 and 1999. Because of various factors,
including fire, in January 2001 (i.e. only 3 years later) 77% of these palms
were either dead or in a poor condition. Due to the change of status of
Sikijang station, it is assumed that the 30 accessions at that station were
mostly lost. However, as some palms remained, they have not been
removed from the inventory. Indonesian germplasm now stands at 170
accessions (including some new ones), of which 61 can be considered as
lost. Therefore, the real number of living accessions for Indonesia cannot
be more than 109, with 4976 palms (on average, only 46 palms per
accession). At least 65 accessions from Indonesia are now lost and should
be re-collected (after having found a way to safely conserve them for the
future).
In Papua New Guinea, demonstration plots of various cultivars were
planted during the early 1930s at the Bubia Lowland Agricultural
Experimental Station. In 1964, it was decided to plant a new trial at
Kapogere Agricultural Station in the Central District, Papua. The scope
of the trial was broadened to include at least nine foreign introductions:
New Hebrides, Solomon Islands, Malaysia, Rennell Island, Singapore,
Ceylon-Random, Ceylon-Selected, Maldives and Fiji Talls. The status of
these accessions remains unknown. They are not registered in CGRD
and they were not transferred to the international collection in Madang.
The accessions collected in the past and planted in old, possibly now
neglected, field genebanks should be safeguarded.
In Thailand, it seems that some old accessions were cut without being
rejuvenated in order to plant oil palm experiments. The sustainability of
germplasm banks seems better in Côte d’Ivoire, India, the Philippines
and Sri Lanka.
Targeted exchanges between germplasm conservation centres can
help in duplicating accessions in different genebanks for safety and in
promoting the sustainability of coconut genetic resources conservation.
Exchange of germplasm immediately after a collecting mission is also
advantageous as many freshly collected embryos would be available and
could be exchanged safely. The exchange of coconut germplasm among
coconut-producing countries remains very limited. For example, from
1995 to 1999, only one coconut variety was exchanged between the
Philippines and Vietnam. In contrast, more than 80% of the foreign
cultivars existing in Brazil, Indonesia, Philippines, Tanzania, Thailand,
Sri Lanka and Vietnam came from the Marc Delorme Research Centre
in Africa in the past.
51
COCONUT GENETIC RESOURCES
Genetic erosion
To understand on a smaller scale the mechanisms that build diversity
and the factors that influence the evolution of coconut types, a study
was undertaken in Vanuatu, a remote archipelago in the South Pacific
(Caillon 2003). There were 60 variants named based on a particular aspect
describing distinct character from the rest of the population (Labouisse
and Caillon 2001). Of these 60 variants, 45% may not be selected but are
still recognized, 20% are chosen for their social importance (e.g. a coconut
brought by a local mythical hero), 15% to make copra, 13.3% for their
nutritional qualities and 6.7% for non-food uses (e.g. containers, ropes).
In a remote village of a northern island (Vanua Lava), where 30 variants
are found, only 5% of all the coconuts planted by 25 farmers are named
(Caillon, pers. com.). Coconuts selected for their domestic and social
interest are the least numerous (7.4% and 8.5% of the planted variants,
respectively) whereas 46.9% are planted for food purposes. The most
striking example concerns the variant with a large proportion of husk
traditionally used to make ropes. These specific coconut types are currently
ignored as other types of ropes have become more prominent. At the
52
CHAPTER 2: Locating and collecting germplasm
same time, the importance of copra for cash has increased. As a result,
truly ‘high husked’ variant can only be found on old plantations dating
from the time when farmers still used coconut ropes. This exemplifies
genetic erosion due to changes in farmers’ preferences.
The number of named variants in a field depends on a farmer’s
willingness to select and plant variants with characteristics other than
high copra, in order to respond to other uses for food, shelter or social
needs. Generally, planting material for new plantation comes from
farmer’s own garden or from a nearby plantation. However, the most
remarkable variants come from other plantations, sometimes distant,
where the farmers might have seen while helping other villagers/farmers
making copra and brought a few seednuts back. However, that level of
diversity also varies greatly depending on the degree of knowledge of a
farmer about his/her own coconuts. Thus, young plantations planted
by the current generation owner in which immature fruits are accessible
and where copra is frequently made will be the richest ones in terms of
genetic diversity. Consequently, the reduction of named variants at a
village scale is due to the combination of cultural erosion through the
loss of traditional uses and through the younger generations’ loss of ability
to identify variants. Such loss caused by social process could further be
demonstrated more clearly by molecular techniques to assess real genetic
erosion even if variants are not readily identified but are still growing
around and are able to exchange genes through allogamy. Such an
approach is currently underway.
Changes in land use patterns, urban migration, industrialization and
replacement with other species (such as oil palm) or with introduced
and/or improved varieties (hybrids) are contributing greatly to the loss
of coconut diversity. Natural calamities (cyclones, drought, diseases such
as cadang-cadang and lethal yellowing) as well as human induced ones
(pollution, war, etc.) are also agents of genetic erosion.
53
COCONUT GENETIC RESOURCES
54
CHAPTER 2: Locating and collecting germplasm
The sources of this information will include agricultural censuses and atlases,
the databases of genebanks, local extension agents and their records and
coconut breeders. Based on this information, it should be possible to identify
(and prioritise among) areas of the following types within the mandate region:
1. Under-represented areas. These can be identified by mapping passport
data of existing collections, and include areas where collecting has
been inadequate or has not occurred at all.
2. Complementary areas. These are areas, which are genetically, or
environmentally different from areas from which collecting has already
taken place, based on passport and characterization data.
3. Environmentally or genetically diverse areas. In previously uncollected
or under-collected areas, it is advantageous to collect over wide range
of agroecological conditions because genetic diversity is partially
correlated with environmental diversity. Preliminary characterization
and evaluation (including genetic diversity studies) of conserved
material may have identified areas, which are particularly diverse
genetically.
4. Areas with target genetic material. This may be inferred from
environmental conditions, known from previous characterization and
evaluation work and/or revealed by local knowledge.
5. Threatened areas. These may be identified by local people, repeat
visits, etc.
Based on the points derived from the brief survey of patterns of genetic diversity
in coconut, the following basic elements of a coconut collecting strategy are
proposed:
55
COCONUT GENETIC RESOURCES
the grid. This can be done using a GIS. Calculate a ‘coconut collecting
importance value’ (CCIV) for each grid square based on the presence and
priority value of each type of area in the grid area.
3. If possible, carry out a preliminary exploratory visit to 2-3 sites per grid
square and collect morphological information to complement
characterization information from germplasm already conserved. Use this
information to further refine the CCIV.
4. Collect germplasm systematically at a minimum of two sites in all grid
squares. If the material is of the same ecotype and/or environmental con-
ditions are similar, leave a minimum of 15 km between sites.
5. Collect more intensively (up to six sites) in grid squares that have a higher
CCIV.
56
CHAPTER 2: Locating and collecting germplasm
of cell is about 1852 km x 20= 37 km. As latitude increases, the N-S sides
remain constant, while the E-W sides decrease progressively. However,
it is still close to 35 km at latitude of 20°. Thus, at least at subtropical
latitudes, it is almost equivalent to using grids measured in km or in
minutes. Discussion on this proposal is in progress.
Germplasm collecting programmes are best carried out in two stages.
The first phase consist of exploration and preliminary survey to collect
information on sites and material that occurs in those sites which will
permit better planning of the second phase. The second phase is the more
systematic collecting mission. Following the geographic grid approach,
the first step will be to gather considerable data in situ (such as fruit
component analysis, evidence of erosion, etc.) and samples for DNA
testing. The data gathered during the exploration phase will then be
analyzed, including using GIS tools. The next step will consist of returning
to a limited number of specific sites that are expected to have high, unique,
new, useful or threatened coconut genetic diversity, based on the
information gathered in phase I, in order to harvest seednuts and bring
them back to the genebank(s). The information from areas where no
collecting takes place will have value for ground-truthing the theoretical
distribution of coconut cultivation (see section on geographical gaps in
this article), as well as for determining future on-farm conservation sites
and monitoring genetic erosion. Up to now, there is no example of such
a strategy using both in situ field characterization and DNA analysis as a
decision-making process. However, with the microsatellite tool kit ready
for use, this is expected to occur in the near future.
Although the two-phase collecting as described above would be ideal,
for practical reasons including financial and time constraints, it may be
impossible to visit the same place twice as suggested. An alternative
method would be to collect directly seednuts and/or the embryos, and
leaflet samples, at the same time, along with in situ characterization data
such as fruit components. Back at the germplasm centre, DNA from the
leaflets or from nuts germinated in the nursery should be analyzed to
decide on which samples to include in the genebank as ‘accessions’ i.e.,
all the populations sampled may not be planted in the genebank. The
objective is to use the diversity and other observation data to enable
planting only the accessions representing particularly high, unique, new,
useful or threatened genetic diversity. This is important as the
maintenance of large number accessions in field genebanks by national
organizations is very difficult and very expensive. Therefore, genebanks
with a minimum number of accessions that capture maximum useful
genetic diversity are needed.
It must be noted, however, that although some samples may not be
57
COCONUT GENETIC RESOURCES
included in the genebank, the data (including the collecting data) on all
samples would be very useful to maintain for mapping purposes.
58
CHAPTER 2: Locating and collecting germplasm
NCDs are selected by farmers in their own gardens. That may explain
the farmers’ preference.
Application of PRA methods to obtaining crucial information on the
origin and extent of the genetic diversity that is being collected would be
most useful in areas where people maintain the closest relationship with
their coconut palms. Surveys conducted in archipelagos such as Cook
Islands and Tuvalu indicate that germplasm diversity and knowledge
seem to be higher in the most isolated islands (Labouisse and Bourdeix
2003; Caillon 2003). This type of information helps in the collecting
process, in particular:
Assessing the reasons for, extent and danger of genetic erosion. Oral
testimony is often the only source of information on change in the extent
of cultivation of a crop, and in the cultural practices being used. Older
farmers will sometimes remember the names and attributes of landraces,
which they no longer grow, and which may have entirely disappeared
from their area.
59
COCONUT GENETIC RESOURCES
Conclusion
Though it is now well recognized that a significant amount of coconut
diversity has been collected and conserved in several coconut research
organizations, especially since the establishment of COGENT, their
representation and availability of associated data are still incomplete.
There is still substantial uncollected indigenous germplasm, and some of
it is under threat of genetic erosion. The most important reason for the
continued occurrence of coconut diversity is that farmers have interest
in and possess knowledge about their coconut varieties. However, along
with the diversity, such knowledge is rapidly eroding in some areas as
so-called modernization and globalisation reach into even the most
remote parts of the world. Researchers will have to focus on breeding
and germplasm utilization to benefit from the investment made in
collecting and conserving.
Emphasis should be placed on the use of molecular techniques and
morphological characterization to rationalize large collections in order
to reduce the actual number of cultivars in the germplasm centres from
around 350 to 150-200, so that the genebanks are more manageable,
both in terms of financial and human resources and scientific
backstopping. Then additional collecting, using these new screening
techniques, should allow adding 150-200 more priority accessions. The
use of Geographical Information Systems tools will facilitate the task of
the collectors.
Some elements were discussed regarding the effectiveness of targeted
collecting, as compared to comprehensive grid sampling and farmer
participatory methods. Use of the concept of CCIV could further help in
identifying the priority accessions to be included in genebank collections
and training to implement collecting strategy and the use of GIS tools is
considered important to enhance the efficiency of collecting. Thick-husked
varieties from Asia/Pacific and sweet husk varieties are two endangered
phenotypes that should be targeted. Surveys that are more systematic
should be conducted in areas that have not been covered during previous
collecting programmes. Some important accessions that have been lost
in collections should also be re-collected. Farmer’s participatory methods
should be applied in communities where people know a great deal about
every coconut palm in their gardens (such as very isolated islands) to
document the knowledge and practices farmers use to maintain coconut
diversity in their fields.
60
CHAPTER 2: Locating and collecting germplasm
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Selangor, Malaysia.
Rognon, F and P Batugal. 1998. Evaluation of Indonesia as a regional
coconut genebank host country. Pp. 41-47. In: V Ramanatha Rao
and P Batugal (eds). Proceedings of the COGENT regional coconut
genebank planning workshop held at Pekanbaru, Indonesia, 26-28
February 1996. IPGRI/COGENT, Rome. Pp 41-47.
Santos, GA, PA Batugal, A Othman, L Baudouin and JP Labouisse. 1996.
Manual on standardized research techniques in coconut breeding.
IPGRI-COGENT, Singapore. 46pp.
Schuiling, M, DA Kaiza and HC Harries. 1992. Lethal disease of coconut
palm in Tanzania. III. Low resistance of imported germplasm. Oléa-
gineux 47(12): 693-697.
Sokal, RR and RF Rolf. 1981. Biometry. Freeman, San Francisco.
Whitehead, RA. 1966. Sample survey and collection of coconut
germplasm in the Pacific islands, 30 May- 5 September 1964. Ministry
of Overseas Development and HMSO, London.
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CHAPTER 2: Locating and collecting germplasm
Introduction
In vitro collecting (i.e., the utilization of in vitro culture techniques for
collecting plant germplasm) offers the plant collector an additional option
for solving various problems which can be encountered during collecting
expeditions. The application of in vitro collecting is particularly useful
for the two main categories of problem crops (i.e., vegetatively propagated
species and species with recalcitrant seeds) (Withers 2002). In vitro
collecting protocols have now been developed for a number of different
species (Pence et al. 2002).
In the case of coconut, seeds are bulky and heavy, making them costly
to transport. They are also highly recalcitrant (Chin and Roberts 1980).
These characteristics limit the amount of material that can be collected
and restrict the geographic range of collecting missions. These limitations
may have serious consequences for genetic resources conservation, since
it is recognized that a large amount of the untapped genetic diversity in
coconut is located in remote areas, such as atoll islands. The key to solving
these problems, however, lies in recognizing that only the embryo is
needed to propagate a coconut palm. Various efficient in vitro culture
protocols are available which allow the production of whole plantlets
from coconut zygotic embryos inoculated in vitro (Batugal and Engelmann
1998; Engelmann et al. 2002).
Status of work
Research on the adaptation of in vitro culture techniques to collecting
coconut embryos was initiated 15 years ago under the aegis of the IBPGR
(International Board for Plant Genetic Resources, the predecessor of
International Plant Genetic Resources Institute -IPGRI), with the aim of
facilitating not only the collecting but also the international exchange of
coconut germplasm. In addition to the advantages offered by this
technique for collecting genetic resources, in vitro collecting would also
avoid the transmission of important coconut diseases, which do not pass
through the embryo. This is particularly important with the expected
increase in international exchange of coconut germplasm linked with
the establishment of the multi-site International Coconut Genebank
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COCONUT GENETIC RESOURCES
The methods developed differ in the degree to which attempts are made
to reproduce laboratory conditions in the field, the amount of in vitro
work actually performed in the field, and, therefore, the point at which
sterilization is carried out. Their utilization requires varying levels of
technical expertise, and the method selected will depend on the
circumstances of the collecting mission and on the tissue culture expertise
available among the collecting team.
The simplest methods, which do not require specific expertise at the
collecting site, are one of the two methods developed in Côte d’Ivoire
(Assy-Bah et al. 1987) and that established in the Philippines (Rillo and
Paloma 1991; Rillo 1995). In the first protocol developed by Assy-Bah et
al. (1987), after disinfection, the plugs of endosperm containing the
embryos are placed in a solution of KCl (16.2 g l-1), then brought back to
the laboratory where they are redisinfected and inoculated in vitro under
the laminar flow (see Protocol 1 below). In the protocol developed in the
Philippines, plugs of endosperm containing the embryos are extracted in
the field, brought to a simple isolation room close to the collecting site,
disinfected with alcohol and commercial bleach, placed in sterile plastic
bags with sterile, moist cotton and transported in cold storage. Upon
arrival in the laboratory, subsequent manipulations are carried out
aseptically, under the laminar flow hood. The cylinders of endosperm
are resterilized with commercial bleach, and the embryos are extracted
and inoculated in vitro for germination and growth. This protocol is used
routinely in the Philippines in the framework of programmes for mass
production of Makapuno embryos (Rillo 1999).
Another protocol, which has been established by Australian
researchers, requires some tissue culture expertise because embryos have
to be extracted from the albumen immediately after their collection, but
allows transport time of up to six weeks (Ashburner et al. 1995, 1996;
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CHAPTER 2: Locating and collecting germplasm
Samosir et al. 1999). Plugs of endosperm are collected in the field and
transported to an improvised laboratory close to the collecting site, where
the embryos are extracted from the albumen, sterilized with commercial
bleach, and inoculated into 2 ml sterile plastic cryotubes containing sterile
water. Manipulations after arrival in the laboratory are performed
aseptically under the laminar flow hood. The embryos are resterilized
and inoculated in vitro for germination and growth
In the other protocols (i.e. the second protocol developed in Côte
d’Ivoire, see below) (Assy-Bah et al. 1987) and those established by Sossou
et al. (1987) and Karun et al. (1993), in vitro inoculation of the embryos is
performed directly at the collecting site, thus requiring the relevant
expertise to be available within the collecting team. The field equipment
requirements are greater than in the protocols described above, but even
these methods range in complexity. The technique of Sossou et al. (1987)
attempts to simulate laboratory facilities and methods in the field using
an inflatable glove box. The protocols established by Assy-Bah et al. (1987)
and Karun et al. (1993), however, accept the limitations of working in
the field and present a lower-technology approach. Endosperm plugs
are extracted from the nuts and disinfected with commercial bleach. The
embryos are then dissected and inoculated inside a wooden or plexiglass
box (to protect from airborne contaminants) and transferred into sterile
culture tubes. With the protocol developed by the research team from
India, embryos are either directly inoculated on growth medium or kept
for 2-4 months in sterile water (Karun et al. 1996). This protocol has
been used successfully by Indian researchers to collect several thousand
embryos from remote Indian Ocean islands (Karun et al. 1998; 2002).
All these protocols give good results, with contamination percentages
below 10% of the inoculated embryos.
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COCONUT GENETIC RESOURCES
The following steps are performed in the laboratory, under the laminar
airflow cabinet.
1. Remove endosperm cylinders from the KCl solution and immerse
in batches of 25 cylinders in commercial bleach for 20 minutes.
2. Place one cylinder in a sterile Petri dish and dissect out the embryo
using forceps and a scalpel. Flame dissecting tools before
manipulating a new embryo to reduce the risk of cross-
contamination.
3. Rinse the embryo once in sterile water (using one flask per embryo
to reduce the risk of cross-contamination) and transfer it to solid
medium in a culture tube.
4. Seal the tube with cling film and place it on a rack for culture in
the growth room.
The following steps are performed inside a wooden box, which provides
some protection from external contaminants. The inside walls of the box
are disinfected with bleach.
1. Place one cylinder in a sterile Petri dish and dissect out the embryo
using forceps and a scalpel. Flame dissecting tools before
manipulating a new embryo to reduce the risk of cross-
contamination.
2. Rinse the embryo once in sterile water (using one flask per embryo
to reduce the risk of cross-contamination) and transfer it to solid
medium in a culture tube.
3. Seal the tube with cling film and place it on a rack for transport
to the laboratory.
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COCONUT GENETIC RESOURCES
References
Ashburner, GR, MG Faure, DR Tomlinson and WK Thompson. 1995. A
guide to the zygotic embryo culture of coconut palms (Cocos nucifera
L.). ACIAR Technical Report No 36, Canberra, Australia.
Ashburner, GR, MG Faure, DR Tomlinson and WK Thompson. 1996.
Collection of coconut (Cocos nucifera L.) embryos from remote
locations. Seed Science Technology 24:159-169.
Assy-Bah, B, T Durand-Gasselin and C Pannetier. 1987. Use of zygotic
embryo culture to collect germplasm of coconut (Cocos nucifera L.).
Plant Genetic Resources Newsletter 71:4-10.
Batugal, PA and F Engelmann (eds). 1998. Coconut embryo in vitro
culture. Proceedings of the first workshop on embryo culture, Banao,
70
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72
CHAPTER 3: Germplasm conservation
Chapter 3
Germplasm
conservation
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COCONUT GENETIC RESOURCES
74
CHAPTER 3: Germplasm conservation
Introduction
The main objective in any plant genetic resources (PGR) conservation
programme is to maintain the highest possible level of genetic variability
present across the genepool of a given species or crop both in its natural
range and in a germplasm collection. The importance of conserving
genetic variability or diversity is well recognized and such defense
mechanisms need to be introduced into modern cultivars to make them
sustainable (Martin et al. 1991; Chang 1994; Kannenberg and Falk 1995).
Countries that are signatories to the Convention of Biological Diversity
endowed with significant amount of genetic and species diversity have a
responsibility to the world at large to conserve them and make them
available for use (Ramanatha Rao 1999). It is generally recognized that
the two approaches of conservation, ex situ and in situ, are both important
in the conservation and use of genetic diversity and should be regarded
as complementary to each other (Maxted et al. 1997; Dulloo et al. 1998;
Ramanatha Rao 1998; Engels and Wood 1999). The ultimate purpose of
germplasm conservation is use and, consequently, any conservation
strategy should include mechanisms that will ensure access to the
germplasm by relevant stakeholders. Other important issues that must
be addressed in a conservation strategy include issues related to policy
and legal frameworks, documentation, socioeconomic aspects,
infrastructure and networks. Since needs of users and technologies may
change over time influencing the ways in which genetic resources are
conserved and used in future and hence, should be taken into
consideration when designing a conservation strategy. At an in house
meeting organized by IPGRI in 2002, a complementary conservation
strategy was defined as “the combination of different conservation actions,
which together lead to an optimum sustainable use of genetic diversity
existing in a target genepool, in the present and future.”
A conservation strategy for coconut has been discussed in the past
(Ramanatha Rao and Engelmann 2000; Ramanatha Rao et al. 1998) and
the current status of the various conservation methods available for
coconuts are described in this chapter. This paper discusses the constraints
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CHAPTER 3: Germplasm conservation
Conservation objective
The most central element for developing a strategy is to define precisely
what the objectives are. In this case, the general objective is to conserve
and utilize maximum coconut genetic diversity. However, there would
be other minor objectives for the establishment of a coconut genebank
such as for immediate utilization, conservation for the long term, focusing
on characterization and evaluation, etc. Strategy applied will also depend
on what one would want to conserve, i.e. genes or genotypes. The strategy
will be very different if the objective is to completely stop the evolutionary
processes (e.g. cryopreservation) or in case the evolutionary processes
need to be maintained (as in in situ conservation). Thus, if the promotion
of conservation of landraces becomes the main objective, conservation
on farm becomes the choice strategy for coconut, which also provides an
opportunity for coconut to evolve under natural and farmer-imposed
conditions. However, there is a need to accumulate more evidence on
the role of farmer selection in a perennial crop like coconut. At the same
time, with many farmers interested in increasing the productivity of
coconut and income generation, breeding for higher yields and multiple
uses becomes priority and hence ex situ conservation in field genebanks,
which enhance the access to diversity by the coconut improvement
scientists, becomes the choice for conserving and using maximum genetic
diversity.
Genetic diversity
The major objective of any conservation effort, especially the one for long-
term, is the conservation of maximum genetic diversity in a crop gene
pool and this is true for coconut as well. Hence, the factors that contribute
to the maximization of genetic diversity in a coconut collection (only
infraspecific diversity in the case of coconut) have significant bearing on
the balance of options chosen for inclusion in a conservation strategy.
Coconut belongs to a monotypic genus and hence all its genetic diversity
is in one species, i.e. Cocos nucifera. The diversity in coconut is mainly in
the different ecotypes/landraces, i.e. conservation of genotypes and,
consequently, using the field genebank allows conservation of most genetic
diversity in the gene pool. Since very little information is available on the
extent and distribution of coconut genetic diversity within and between
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COCONUT GENETIC RESOURCES
Stakeholders
Conservation of any genepool is not just a responsibility of an organization
or individual. Several interested organizations and individuals are
involved, including those who were responsible for the generation of the
variability in the first place. Thus, in the case of coconut, the interests of
small coconut farmers, organizations interested in their welfare and
coconut research organizations/scientists and at the end the consumers,
etc., need to be considered. For example, coconut farmers for whom
coconut growing is a way of life and in some instances, growing the
specific landraces or ecotypes, on-farm conservation takes precedence
over the other approaches. This needs to be strengthened and
complemented by other stakeholders who can play an important role in
conserving that part of coconut diversity that might not be conserved
on-farm due to reasons such as genetic erosion and utilization, using
other complementary approaches such as conservation in field genebanks.
Infrastructure
The infrastructure needed and their availability determine the option to
be chosen. Hence, the infrastructure needs for each of the option and
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CHAPTER 3: Germplasm conservation
Socioeconomic aspects
The social considerations probably are more important in implementing
on-farm conservation and less so while establishing ex situ conservation
facilities. However, the economic aspect would be a key determinant in
what methods are utilized. While planning for the former, several issues
related to socioeconomics of coconut farming, indigenous knowledge,
community participation, etc. have to be considered that make the on-
farm conservation sustainable. Such considerations also make germplasm
conserved on farm accessible for use by the farmers and communities as
well as national agricultural research systems. Generally speaking, in
the countries that are interested in conservation and use of coconut, the
cultivation of coconut is not greatly threatened and will continue in the
end. This consideration is important as establishing either ex situ or in
situ conservation programmes are expensive and must be compatible with
national objectives. Therefore, it is important to allow the increase of
genetic diversity that is actually being planted by farmers to the extent
possible. In this respect, a close cooperation between in situ and ex situ
efforts is critically important.
Network
Any complementary conservation efforts for coconut at the national level
have to be multidisciplinary and multi-stakeholder driven in order to
conserve maximum diversity. Thus, an in-country network consisting of
interested individuals, organizations (both public and non-governmental)
and farmers is required. Similarly, developing a complementary
conservation strategy at an international level requires coordination and
collaboration among interested countries, as demonstrated by the
International Coconut Genetic Resources Network (COGENT), as the
genetic diversity that needs to be conserved is spread across borders.
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COCONUT GENETIC RESOURCES
Policy/Legal issues
Without any doubt, for any conservation approach to be in place, much
depends on the type of legal arrangements that can be put in place for
transfer and access to genetic material and for sharing of benefits arising
out of their use. In many countries, there may not be specific laws that
prevent or promote the conservation of coconut genetic resources, but
policies in a country could influence the importance accorded to such an
effort. Thus, before venturing to establish a conservation strategy for
coconut, it is important to check on the priority accorded to coconut at
national level. For example, in most countries in the Asia Pacific, high
priority is accorded to this crop and hence the efforts on its conservation
and use are generally in line with the national policies. As noted earlier,
conservation is mainly to make and keep the genetic resources accessible
for use by users (researchers, farmers etc.). Hence the policies that promote
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83
COCONUT GENETIC RESOURCES
84
CHAPTER 3: Germplasm conservation
Seeds and ⌧ Not feasible- ⌧Not feasible ⌧ Seeds are Field Cryo-
zygotic seeds are recalcitrant and too collecting preservation
embryos recalcitrant, no large; seed protocol protocol has been
natural soil seed conservation not established for established for
banks feasible zygotic zygotic embryos;
embryos; In suitable for long
vitro culture term conservation
functional
85
COCONUT GENETIC RESOURCES
In vitro collecting • Well established • Only short-term storage • Testing of optimized in vitro
and culture of protocols • Relatively high infrastructure culture protocol
zygotic embryos • Facilitates germplasm needs
exchange • High maintenance cost
• Less accessible to users
Cryopreservation • Feasible for long term • Requires skilled labour • More work required to
secure storage • High initial investment cost for refine cryopreservation
• Easy to maintain, low Infrastructure protocol
costs
• Protocol for coconut
embryos has been
developed
• Not labour intensive
Pollen • Large number of • Not yet feasible for long term • Refinement on
conservation samples can be • Only conserve part of cryopreservation protocol
maintained in small diversity • Desiccation tolerance
space • Cannot be used to conserve
• Easy to handle specific genotypes
• Useful for crosses
• Can be cryopreserved
allowing long term
storage
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CHAPTER 3: Germplasm conservation
Step 3 Analysis of the feasibility of each option for each sub-objective in terms of
infrastructure needs, costs, risks involved, etc.
References
Ashburner, GR and W Rhode. 1994. Coconut germplasm characteriza-
tion using DNA marker technology. Pp. 44-46. In: MA Foale and PW
Lynch (eds). Coconut improvement in the South Pacific. Proceedings
of a workshop held in Taveuni, Fiji, 10-12 November 1994. Canberra,
ACIAR Proceedings No. 53.
Assy-Bah, B, T Durand-Gasselin and C Pannetier. 1987. Use of zygotic
embryo culture to collect germplasm of coconut. FAO/IBPGR Plant
Genetic Resources Newsletter 71:4-10.
Assy-Bah, B and F Engelmann. 1992. Cryopreservation of mature em-
bryos of coconut (Cocos nucifera L.) and subsequent regeneration of
87
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CHAPTER 3: Germplasm conservation
Introduction
The two basic approaches to conservation of plant genetic resources (PGR)
are termed ex situ and in situ. Ex situ approach involves conserving the
genetic resources outside their original habitat in the form of seed,
embryos, tissues or plants. Methods of ex situ conservation can include
cold storage, in vitro storage or field genebanks, depending on the
propagules used. In contrast, in situ conservation involves the
maintenance of genetic diversity of a species or genepool in the habitat
in which the diversity evolved. In the definition of the Convention on
Biological Diversity (CBD), it includes the maintenance of diversity in
farmers’ fields and orchards, thus it includes the so-called on-farm
conservation. It is now well recognised that for any given genepool, a
number of different approaches and methods will be necessary for
efficient and cost-effective conservation. Such a strategy is termed as
complementary conservation strategy (Ehsan et al. 2003). However, with
the current level of conservation options for coconut, field genebanks
still play the major role in their conservation and use. It is presently the
most feasible ex situ conservation method that can be used for coconut.
This chapter attempts to look at the general nature of conservation of
PGR in field genebank and looks specifically on how coconut fits into
this context.
Field genebanks
Many important varieties of field and horticultural crops including
coconuts are either difficult or impossible to conserve as seeds (i.e. no
seeds are formed or if formed, the seeds are recalcitrant) or the species
are vegetatively propagated. Conservation in field genebanks (FGBs) is
necessary because some species have short-lived seeds (recalcitrant) such
as cocoa, coconut, oil palm, rubber and many tropical fruits like mango,
mangosteen, jackfruit, durian and rambutan. Seeds of some recalcitrant
species can only be stored without desiccation for a few days, weeks or
months (Roberts et al. 1984). Even if technology for conserving recalcitrant
seeds is developed, there is still the problem with long regeneration cycle
and which constraint utilization (Hawkes 1982). Hence, they are
conserved in FGBs. FGBs may run a greater risk of being damaged by
natural calamities, infection, neglect or abuse. Ex situ conservation of
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COCONUT GENETIC RESOURCES
Genetic considerations
To effectively collect and conserve PGR, there is a need to have a sufficient
understanding of some of the conservation genetic principles, especially
those related to the structure and distribution of the genetic diversity of
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CHAPTER 3: Germplasm conservation
Sample and plot size. The size of the plot depends mainly on the breeding
system and diversity in the sample and on the number of palms planted.
It will be most appropriate if the material planted in a field genebank
can be representative of the source population. For raising seedlings and
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CHAPTER 3: Germplasm conservation
95
COCONUT GENETIC RESOURCES
Agronomic considerations
96
CHAPTER 3: Germplasm conservation
Ecological adaptation
Close relationship between some characters in a population and its habitat
in which the characters or traits have evolved and expressed has been
reported many times in the literatures. Collections made from separate
geographical areas can differ substantially. For instance, some characters
are common in accessions collected from certain regions but not in the
other region. Adaptability of the species or the accession to the location
may be an important point to consider when long-term conservation is
involved, especially in the case of regional genebanks. However, this may
not be always possible as FGB may contain introduced or unadapted
material. For efficient maintenance as well as from the point of view of
use of the material conserved, it is important that the plants in the FGB
be able to produce flower, fruit and set viable seed. If the site for the
genebank is located in an area with (a potential for) commercial orchard
plantation, then the value of the genebank would be even greater, in
terms of use of the conserved material. The genebank can act as the
nucleus and provide planting material for commercial plantations.
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COCONUT GENETIC RESOURCES
Choice of material
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CHAPTER 3: Germplasm conservation
Sustained commitment
It is important to critically examine the existing arrangements with regard
to mandate and responsibilities at both the national and regional level
for coconut genetic resource conservation. For example, the multi-site
International Coconut Genebank (ICG) has been established in respective
countries after an assessment of the level of governmental and institutional
commitment to the maintenance of the collections. Only when an effective
governmental commitment exists should the establishment or extension
of a collection be considered. This is especially important for crops like
coconut which needs a relatively large area in order to plant sufficient
number of plants/trees necessary to represent the genetic diversity. Initial
establishment costs, which in some cases can be very high, and recurring
costs for maintenance of the collection should be considered at the
planning stage and should be provided for. In many cases, the latter is
ignored and the collections can run into problems within a few years of
their establishment. Given this background, the establishment and
maintenance of FGBs, appears to be more easily organized at national
level, as part of national PGR programmes, rather than at regional or
international level. In the case of regional or international efforts, it is
essential to obtain the full support and commitment of the government
of the host country in which the FGB is to be set up and to obtain
commitments from the individual member states of the network to
financially support the effort. For any emergency situation, provisions
have to be made as to how and where the collection can be duplicated, if
so decided. The role of the cooperating international institutions needs
to be defined as well.
Legal issues
Since the CBD has come into force, countries now have the sovereign
rights over the biological diversity present within their borders. In view
of this, a clear consensus must be reached by all the member countries of
a given crop genetic resources network with regard to sharing the benefits
derived from the germplasm conserved, as well as, on access conditions
to the conserved germplasm and information related to it as was done in
the case of ICGs. The necessary agreements and mechanisms on access
to and provision of accessions should be in place before the establishment
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References
Breese, EL. 1989. Regeneration and multiplication of germplasm
resources in seed genebanks: The scientific background. IBPGR, Rome,
Italy.
Child, R. 1964. Coconuts. Longman, London.
Crossa, J and R Vencovsky. 1994. Implications of the variance effective
population size on the genetic conservation of monoecious species.
Theoretical and Applied Genetics 89:936-942.
de Nucé de Lamothe, M and F Rognon. 1975. Assisted pollination and
contamination by undesirable pollens. Oléagineux 80(8-9):359-364.
Ehsan, D, V Ramanatha Rao, F Engelmann and J Engels. 2004.
Complementary conservation strategy for coconut. Pp. 63-75. In: P
Batugal, JT Oliver and V Ramanatha Rao (eds). Coconut genetic
resources. IPGRI-COGENT, Serdang, Selangor, Malaysia.
Engelmann, F (ed). 1999. Management of field and in vitro germplasm
collections. Proceedings of a consultation meeting, 15-20 January
1996, CIAT, Cali, Colombia. Rome, Italy, IPGRI. 165p.
Engelmann, F and JMM Engels. 2002. Technologies and strategies for ex
situ conservation. Pp. 89-104. In: JMM Engels, V Ramanatha Rao,
AHD Brown and MT Jackson (eds). Managing plant genetic diversity.
CABI, Wallingford, UK and IPGRI, Rome, Italy.
Epperson, JE, DH Pachio and CL Guevara. 1997. A cost analysis of
maintaining cassava plant genetic resources. Crop Science 37:1641-
1649.
Esser, K. 1976. Genetic factors to be considered in maintaining living
plant collections. Pp. 185-198. In: JB Simmons, RI Beyer, BE
Brondham, GL Lucas and VTH Parry (eds). Conservation of
threatened plants. Plenum Press, New York.
FAO and IPGRI. 1994. Genebank Standards. FAO-IPGRI, Rome, Italy.
FAO. 1995. The international network of ex situ collections and the
CGIAR centres. Joint report by FAO and the International Plant
Genetic Resources Institute (on behalf of the CGIAR Centres) on the
implementation of the agreement signed between FAO and the CGIAR
Centres on 26 October 1994. CPGR-6/95/12 ADD. 1. Commission
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Background of COGENT
In 1992, the Consultative Group on International Agricultural Research
(CGIAR) decided to include coconut in its research portfolio after studies
indicated that international support and global coordination of research
in coconut is essential to make coconut more productive and beneficial
to small-scale coconut farmers. The CGIAR and its Technical Advisory
Committee (TAC) recognized that international support to coconut
research was needed as many coconut-producing countries lacked both
the human and material resources to conduct expensive and time-
consuming research. Thus, it tasked the International Plant Genetic
Resources Institute (IPGRI) to undertake research on coconut genetic
resources, which the CGIAR identified as one of the five priority research
areas that deserved international support. Accordingly, IPGRI included
coconut genetic resources in its plant genetic resources research
programme and organized the International Coconut Genetic Resources
Network (COGENT) to implement this mandate. Starting with 15
countries, COGENT has rapidly developed into an active global network
currently involving 38 coconut-producing countries (Table 1).
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CHAPTER 3: Germplasm conservation
Rationale
World coconut production is declining due to ageing palms, natural
calamities, inadequate replanting programme, lack of suitable planting
materials, poor crop management, population pressures causing crop
shifts, and lack of capital for farmers to invest in coconut production.
The development and use of improved coconut cultivars can markedly
help solve these problems and promote increased coconut production.
However, the landraces of coconut (ecotypes), which contain important
genetic characters for yield, disease and pest resistance and adaptation,
are under treat to genetic erosion and need to be collected, conserved,
evaluated and shared more widely to develop improved varieties.
Conservation and use of a wide range of coconut diversity is faced
with several constraints. First, while national coconut field genebanks
are important sources of germplasm for exchange among COGENT
member countries, many countries still lack the necessary economic and
technical capacities to maintain their conserved germplasm. Second, many
countries do not have the capacity to evaluate the performance of their
germplasm while the data obtained are often not comparable. Third,
multi-country negotiations for obtaining germplasm are often difficult
for national breeding programmes needing to import germplasm that
belong to several countries. Fourth, many researchers, who may want to
share their germplasm, do not have the needed policy cover and their
countries generally lack the needed facilities for ensuring the safe
movement of coconut accessions. Fifth, COGENT does not have a concrete
mechanism that would facilitate access and safe movement of germplasm
to its member countries.
To address these constraints, the COGENT Steering Committee
decided to establish a multi-site ICG in 1995. Subsequently, site assessment
surveys were conducted to evaluate the suitability of proposed regional
genebank sites in the five host countries of Indonesia, India, Papua New
Guinea, Côte d’Ivoire and Brazil. During the International Coconut
Genebank workshop held from 26 to 28 February 1996 at Pekanbaru,
Riau, Indonesia, representatives of IPGRI, the Centre de Cooperation
Internationale en Researche Agronomique pour le Development (CIRAD)
and the World Bank worked with representatives of COGENT member
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COCONUT GENETIC RESOURCES
The sites for ICG were chosen based on surveys conducted by coconut
experts who considered and evaluated several important selection criteria.
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CHAPTER 3: Germplasm conservation
111
COCONUT GENETIC RESOURCES
Initial achievements
Under COGENT, ICG sites in four host countries have been strengthened
to some extent [i.e., ICG-South Asia (India), ICG-Southeast and East
Asia (Indonesia), ICG-South Pacific (Papua New Guinea), and ICG-
Africa and the Indian Ocean (Côte d’Ivoire)]. IPGRI has supported the
ICGs in capacity building for embryo culture technology, in terms of
materials, skills and laboratory upgrading to prepare them for importing
and maintaining germplasm from network member countries in their
respective regions. They have also been trained on germplasm collecting,
morphometric and molecular marker (microsatellite kits) methods of
germplasm characterization, genebank management and on
cryopreservation. Since COGENT is currently an open network, it was
proposed to further strengthen germplasm conservation by executing a
formal Memoranda of Agreement with COGENT member countries, at
the highest government level, to formalize their membership in COGENT
and to formally commit access to their coconut germplasm.
Despite meager resources, the ICGs have made some significant
achievements. Table 2 shows the date of signing of the hosting agreements
and the status of conserved germplasm in each of the host countries.
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CHAPTER 3: Germplasm conservation
* Includes additional accessions entered into the ICG after the signing of the MOA
Conclusion
Two of the major priorities of IPGRI and COGENT are: (1) saving
threatened diversity and (2) promoting the use of conserved materials
for developing improved varieties for national programmes and small-
scale farmers. Thus, accelerated effort is being placed on the movement
of germplasm from COGENT’s member countries to their regional ICG
and the provision of breeding materials from the older ICG (i.e., Côte
113
COCONUT GENETIC RESOURCES
d’Ivoire and Papua New Guinea) to member countries and soon, from
the other ICG host countries where some of the new conserved materials
are now starting to bear fruits.
While IPGRI/COGENT desires to implement a progressive germplasm
movement initiative, at the same time, it would like to ensure that this is
done in a safe manner to protect the coconut industry of receiving
countries. Thus, IPGRI approached the Australian Centre for
International Agricultural Research (ACIAR) to fund the development
and publication of a manual on Germplasm Health Management for
COGENT’s multi-site International Coconut Genebank. ACIAR has
agreed to support this very important and strategic initiative. This manual
will be useful as a guide to genebank managers and plant quarantine
officers worldwide in making informed decisions on the safe movement
of coconut genetic resources.
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115
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116
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117
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CHAPTER 3: Germplasm conservation
The International Coconut Genebank for Southeast and East Asia (ICG-
SEEA) is hosted by the Indonesian Agency for Agricultural Research
and Development (AARD) using the field genebank in Pekanbaru, Riau
Province; experimental gardens in Manado, North Sulawesi; and AARD
laboratory facilities in Bogor, West Java and in Manado, North Sulawesi.
In July 1995, the COGENT Task Force evaluated the proposed site at
Sikijang Mati, Pekanbaru, Riau Province in Central Sumatra and found
it to be generally suitable and made some suggestions for improvement.
The site is located 20 km from the city of Pekanbaru, the capital of Riau.
Pekanbaru has regular flights from Jakarta (1.5 hours) and Singapore
(30 minutes), as well as other cities in Sumatra. The annual rainfall is
about 2000 mm, well distributed over the year. The topography of the
area is undulating and most of the land is covered by secondary forest,
with small rivers. The soils are yellow to yellow-red podzolic, low in
organic matter and with pH of around 5.0. The soils are generally very
poor and unsaturated but they make a good substratum for the crop to
grow and respond well to the application of fertilizers, which are readily
absorbed by the crop. Since the area was not very uniform, the Task
Force recommended that a detailed survey be undertaken to select only
those areas where soils are generally good and more than one meter
deep to avoid the hard pan. About 1000 ha of secondary forest has been
offered by the Government of Indonesia which could be used for the ICG
(200 ha) and the rest for production area to generate income for the
maintenance cost of the ICG.
The Memorandum of Agreement for the establishment of the ICG-
Southeast and East Asia was signed by the Government of Indonesia,
IPGRI on behalf of COGENT and FAO as trustee in May 1999. The
function of the coconut collection at Sikijang was not only for germplasm
conservation, but also for genetic evaluation and utilization. To date,
Indonesia has conserved a total of 29 of the designated germplasm in the
International Coconut Genebank for Southeast and East Asia at Sikijang.
The list of initial designated germplasm during the signing of the MOA is
shown in Annex 1.4.
Due to the financial crisis in 1997 and the resulting lack of government
budget, there was slow development of the Sikijang area, resulting in the
squatting of the remaining areas by surrounding inhabitants and
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COCONUT GENETIC RESOURCES
migrants. Two extension ICG areas have therefore been identified: the
Paniki Experimental Garden (100 ha) located beside the Indonesian
Coconut and Other Palmae Research Institute (ICOPRI) in Manado, and
the Pandu Experimental Garden (80 ha) which is about 18 km from the
ICOPRI office and belonging to the Balai Pengkajian Teknologi Pertanian
(BPTP). The soil and climate there are very suitable for coconut growing.
Therefore, it was recommended that the main part of the ICG-SEEA be
moved from Sikjiang to North Sulawesi. However, the 29 accessions
which have been collected will remain in Sikijang and maintained by the
Indonesian Government.
To date, a total of four accessions have been received from Malaysia,
six from China and 10 each from the Philippines, Thailand and Vietnam,
respectively. A total of at least 100 accessions have been conserved from
Indonesia from 1996 to 2001. Twenty-nine of these 100 accessions have
been planted at Sikijang, Pekanbaru, Riau, which was the initial identified
site for the ICG-SEEA. In addition, a total of 460 embryos of Malayan
Tall and 469 embryos of Malayan Green Dwarfs were received from
Malaysia and successfully cultured in vitro.
IPGRI/COGENT has supported the ICG-SEEA in collecting
germplasm from the Moluccas Island, East Timor, West Nusa Tenggara,
Sangir Talaud Islands, Salibabu Island, Buol District, Central Sulawesi,
Sangir Talaud district and North Sulawesi.
From 1995 to 2000, 11 specialists have visited Indonesia to help the
country in its coconut PGR activities. These include identifying a suitable
site for the ICG-SEEA, collecting leaf samples for electron microscopy
detection of mycoplasma, identifying marketable alternative products
for coconut as well as suitable varieties for these products, evaluating
COGENT’s collecting and conservation strategies, assessing pest risk and
evaluating the progress of the ICG, and assisting in the installation of
equipment for feasibility studies.
Four training courses were held in the country, whereby 52 researchers
from nine countries attended. The training courses, which were funded
by the Asian Development Bank (ADB), were hosted by ICOPRI (formerly
the Research Institute for Coconut and Palmae or RICP). IPGRI/COGENT
has also sponsored 20 local researchers and specialists for staff
development training in coconut data analysis, coconut collecting and
conservation, embryo culture, technical writing/seminar presentation
and proposal writing, the use of the microsatellite kit and others which
are related to the COGENT’s poverty reduction project.
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121
COCONUT GENETIC RESOURCES
122
CHAPTER 3: Germplasm conservation
123
COCONUT GENETIC RESOURCES
PREAMBLE
The Government of Papua New Guinea (hereinafter referred to as ‘Host Country’),
hosting the International Coconut Genebank for the South Pacific, the International
Plant Genetic Resource Institute (hereinafter referred to as ‘IPGRI’, one of the Cen-
tres of the Consultative Group on International Agricultural Research), acting on
behalf of the International Coconut Genetic Resources Network (COGENT), as
described in the attachment ‘Background to the Agreements’) and the Food and
Agriculture Organization of the United Nations (hereinafter referred to as ‘FAO’);
Considering that the FAO Commission on Genetic Resources for Food and Agricul-
ture (hereinafter referred to as the “Commission”), as the relevant intergovernmental
body in this field, has the responsibility for monitoring the implementation of Arti-
cle 7 of the International Undertaking on Plant Genetic Resources;
Considering that the Coconut germplasm accessions have been donated to the In-
ternational Coconut Genebank for the South Pacific on the understanding that these
accessions will remain freely available;
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CHAPTER 3: Germplasm conservation
Considering that the Government of Papua New Guinea has expressed the wish
that the designated coconut germplasm accessions, kept in the International Coconut
Genebank for the South Pacific, be recognized as part of the International Network
of Ex Situ Collections (as per the International Undertaking on Plant Genetic
Resources) under the Auspices of FAO;
Article 1
APPLICATION OF THIS AGREEMENT
This Agreement shall be construed and applied in a manner consistent with the
provisions of the Convention on Biological Diversity and the International
Undertaking on Plant Genetic Resources.
Article 2
BASIC UNDERTAKING
The Government of Papua New Guinea hereby places under the auspices of FAO,
as part of the International Network of Ex Situ Collections provided for in Article 7
of the International Undertaking on Plant Genetic Resources, the accessions of
coconut genetic resources listed in the Appendix hereto (hereinafter referred to as
the “designated germplasm”), in accordance with the terms and conditions set
forth in this Agreement. The List of designated germplasm will be updated every
two years as new accessions are added to the collection.
Article 3
STATUS OF DESIGNATED GERMPLASM
a) The Government of Papua New Guinea shall hold the designated germplasm in
trust for the benefit of all countries in accordance with the International
Undertaking on Plant Genetic Resources and the terms and conditions set out
in this Agreement.
b) The Government of Papua New Guinea shall not claim legal ownership over
the designated germplasm, nor shall it seek any intellectual property rights
over that germplasm or related information.
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COCONUT GENETIC RESOURCES
Article 4
PREMISES
a) The premises, i.e., land and/or laboratories, in which the designated germplasm
is conserved, shall remain in the charge of the Government of Papua New Guinea.
b) FAO shall have a right of access to the premises at any time and the right to
inspect all activities performed therein directly related to the conservation and
exchange of the designated germplasm.
Article 5
MANAGEMENT AND ADMINISTRATION
a) The Government of Papua New Guinea undertakes to manage and administer
the designated germplasm in accordance with Internationally Accepted
Standards, including standards as agreed upon by COGENT, and the Interna-
tional Genebank Standards, endorsed by the Commission, where these are
applicable to coconut, and ensuring that all the designated germplasm is
duplicated in order to ensure its safety.
b) FAO may recommend action, if it considers such action to be desirable, to
ensure the proper conservation of the designated germplasm.
c) If the orderly maintenance of the designated germplasm is impeded or threatened
by an event, including force majeure, and the Government of Papua New Guinea
does not have the capacity to take appropriate preventive or curative action,
FAO and IPGRI shall seek the necessary resources from the international
community for action to ensure the safety of the designated germplasm, including
if necessary by its evacuation and transfer.
Article 6
POLICIES
The Government of Papua New Guinea and IPGRI recognize the intergovernmental
authority of FAO and its Commission in setting policies for the International Network
of Ex Situ Collections referred to in Article 7 of the International Undertaking and
undertake to consult with FAO and its Commission on proposed policy changes
related to the conservation of, or accessibility to, the designated germplasm, subject,
always to the provisions of Article 9 hereinafter. The Government of Papua New
Guinea and IPGRI shall give full consideration to any policy changes proposed by
the Commission.
Article 7
STAFF
a) Staff responsible to manage and administer the designated germplasm shall be
employed and remunerated by the Government of Papua New Guinea.
b) As and when deemed appropriate, FAO and IPGRI shall furnish technical
backstopping on request by the Government of Papua New Guinea and
COGENT.
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Article 8
FINANCES
The Government of Papua New Guinea shall remain responsible for financing the
maintenance of the designated germplasm.
Article 9
Article 10
This provision shall not apply to the repatriation of germplasm to the country that
provided such germplasm.
Article 11
DURATION
a) This Agreement is concluded for a period of 4 years and shall be automatically
renewed for further periods of 4 years unless notice of non-renewal is given in
writing by either party not less than 2 years before the end of any 4-year period.
Article 12
TERMINATION
a) Either FAO or the Government of Papua New Guinea may terminate this Agree-
ment at any time by giving notice to the other, two years in advance of the
termination date.
b) FAO, the Government of Papua New Guinea and IPGRI, shall, in such case, take
all necessary measures to wind up joint activities in an appropriate manner and,
within the limits of their respective competencies, to ensure the continued con-
servation of and access to the designated germplasm.
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COCONUT GENETIC RESOURCES
Article 13
SETTLEMENT OF DISPUTES
a) Any dispute concerning the implementation of this Agreement shall be settled
by mutual consent.
b) Failing mutual consent, such dispute may be submitted, at the request of either
FAO, or the Government of Papua New Guinea or IPGRI, to an arbitral tribunal
composed of four members. Each party shall appoint one arbitrator. The three
arbitrators thus appointed shall designate by mutual consent the fourth arbitrator,
who will act as the presiding arbitrator of the tribunal. In case of equal division
of votes the presiding arbitrator will have a second vote.
c) If within two months after the receipt of a party’s notification of the appointment
of an arbitrator one or both of the other parties has/have not notified the first
party of the arbitrators they have appointed, the first party may request the
Secretary-General of the United Nations to appoint arbitrators to represent par-
ties that have not appointed an arbitrator.
d) If within two months after the appointment of the three arbitrators they have not
agreed on the choice of the presiding arbitrator, such presiding arbitrator shall
be designated by the Secretary-General of the United Nations at the request of
either party.
e) Unless the parties to the dispute decide otherwise, the tribunal shall determine
its own procedure.
f) A majority vote of the arbitrators shall be sufficient to reach a decision which
shall be final and binding for the parties to the dispute.
Article 14
AMENDMENT
a) FAO, the Government of Papua New Guinea or IPGRI may propose that the
Agreement be amended by so informing the other parties
b) If there is mutual agreement in respect of a proposed amendment, the amendment
shall enter into force on whatever date is set, and be reported to the next session
of the Commission.
Article 15
DEPOSITARY
The Director-General of FAO shall be the Depositary of this Agreement. The
Depository shall:
a) Send certified copies of this Agreement to the Member Nations of FAO and to
any other Government which so requests;
b) Arrange for the registration of this Agreement, upon its entry into force, with the
Secretariat of the United Nations in accordance with Article 102 of the Charter
of the United Nations;
c) Inform FAO Member Nations of:
i) The signature of this Agreement in accordance with Article 16; and
ii) The adoption of amendments to this Agreement in accordance with Article
14.
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CHAPTER 3: Germplasm conservation
Article 16
COMING INTO FORCE
This Agreement shall come into force upon signature by the authorized representative
of FAO, the Government of Papua New Guinea and IPGRI.
Date:
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Appendix 1
130
CHAPTER 3: Germplasm conservation
Other Ecotypes
73. Cameroon Red Dwarf Ivory Coast
74. Salak Green Dwarf Indonesia
75. Pilipog Green Dwarf Philippines
76. Tacunan Green Dwarf Philippines
77. Aromatic Green Dwarf Thailand
78. Catigan Green Dwarf Philippines
79. Brizilian Green Dwarf Ivory Coast
80. West African Tall Ivory Coast
81. Sri Lankan Tall Sri Lanka
82. Panama Tall Jamaica
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Appendix 2
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CHAPTER 3: Germplasm conservation
Under the mandate of the CGIAR, the IPGRI established COGENT with
the endorsement of the Technical Advisory Committee. IPGRI functions
as the executing institution for COGENT and provides administration
and technical support and advice.
An essential component for sustainable production and improvement
in coconut is the availability of a wide diversity of germplasm from around
the world for use as introductions or in coconut breeding programmes to
develop improved coconut varieties and hybrids for coconut producing
countries.
To further ensure the security of germplasm in national collections
which are important to each region and to provide member countries
with germplasm for developing better varieties and hybrids, COGENT
will establish an international multi-site genebank consisting of a
regional genebank in each of the five COGENT regions. The host country
will benefit from the use of the entire germplasm collection, and duplicates
supplied from the other regional genebanks, in its breeding programme
to develop high-yielding and adapted coconut varieties. The host
countries have agreed to a 10-point criterion which includes, among
others, access of member countries to the held germplasm and
commitment to gather and submit data and to maintain the collection.
The Convention on Biological Diversity (CBD) is a legally binding
international agreement that sets out the sovereign rights of countries
over their genetic resources as well as the responsibilities of states to
conserve and to share these resources and benefits arising from their use.
The Food and Agriculture Organization (FAO) is in the process of
establishing Global Network of Ex Situ Collections. In December 1994,
close to half a million germplasm accessions of food crops held by 12
International Agricultural Research Centres under the CGIAR were
placed under FAO trusteeship through a series of agreements signed by
FAO and the chairman of the CGIAR acting on behalf of each of the 12
Centres. These agreements were developed in accordance with the CBD.
During a COGENT workshop held on 26-28 February 1996 at
Pekanbaru, Riau, Indonesia, representatives of IPGRI, CIRAD and World
Bank participated with COGENT members in developing a series of legal
agreements, seven-year workplans and proposed budgets for each of the
initial four genebanks to be hosted by India for South Asia, Indonesia for
Southeast Asia, Papua New Guinea for the Pacific and Côte d’Ivoire for
Africa.
The following three agreements, which are considered consistent with
the CBD and necessary to facilitate access to coconut genetic resources
of which individual countries agree to designate to the international
genebanks, are enclosed. These agreements follow closely those agreed
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COCONUT GENETIC RESOURCES
to by FAO and the CGIAR centres, with two important changes. First,
each host country holding the designated accessions is to be a party in
signing the tripartite agreement, and IPGRI is the second party, acting
on behalf of COGENT.
(a) The tripartite agreement [Agreement between {Name of Host
Country}, the International Plant Genetic Resources Institute
(IPGRI) and the Food and Agriculture Organization of the Uni-
ted Nations (FAO) Placing Coconut Germplasm Collections under
the Auspices of FAO], provides a list of designated accessions for
each genebank, and spells out the rights and obligations of the
parties to the agreement.
(b) The Germplasm Acquisition Agreement sets out the terms and
conditions of movement of coconut germplasm accessions from
the providing country to each of the international genebanks.
(c) A standard Material Transfer Agreement (MTA) specifies that
the recipient agrees not to claim legal ownership over the
designated germplasm or take out any intellectual property rights
over that germplasm or related information. Furthermore, the
recipient also undertakes to pass the same obligations to all fu-
ture recipients of designated germplasm. The MTA will be used
for designated germplasm.
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CHAPTER 3: Germplasm conservation
135
COCONUT GENETIC RESOURCES
Note:
Locations where materials are held:
• 1 – 55 Stewart Research Station; Papua New Guinea Cocoa & Coconut Research Institute
Madang, Madang Province
• 56 – 82 To be established at Stewart Research Station, Madang, PNG
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CHAPTER 3: Germplasm conservation
KASARAGOD KIDU
1. Borneo 1. West Coast Tall
2. Standard Kudat 2. Andaman Ordinary
3. Java 3. Benaulim
4. Malayan Orange Dwarf 4. Tiptur Tall
5. Malayan Green Dwarf 5. East Coast Tall
6. F.M.S. 6. Chowghat Green Dwarf
7. S.S. Green 7. Malayan Yellow Dwarf
8. S.S . Apricot 8. Philippines Ordinary
9. Philippines Lono
10. San Ramon
11. Cochin China
12. Lifou Tall
13. British Solomon Islands
14. Jamaica Sanblas
15. St. Vincent
16. Blanchissuse
17. Kenya Tall
18. Camaroon Dwarf
19. West African Tall
20. Mawa Hybrid (PB 121
21. Zanzibar Tall
22. Ceylon Tall
23. King Coconut
24. Kappadam
25. Spicata
26. Ayiramkachi
27. Kulasekharam Green Dwarf
28. Kulasekharam Yellow Dwarf
29. Kulasekharam Orange Dwarf
30. Calangute
31. Nadora Tall
32. Andaman Giant
33. Andaman Ranguchan
33. Car Nicobar
34. Auck Chung
35. Tamaloo
36. Kimos
37. Kimmai
38. Katchal
39. Campbell Bay
40. Lakshdweep Micro
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COCONUT GENETIC RESOURCES
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CHAPTER 3: Germplasm conservation
139
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Introduction
Seeds cannot be used for coconut germplasm conservation owing to their
large size and their highly recalcitrant storage behaviour (Chin and
Roberts 1980), which renders their storage under conventional dry and
low-temperature conditions impossible. Genetic resources of coconut are
thus traditionally maintained in field genebanks. There are many field
collections of coconuts in various countries, usually connected with
coconut research institutes, which conserve a total of 1416 accessions.
This number is projected to increase over the next few years, with the
establishment of the multi-site International Coconut Genebank or ICG
(see preceding article) under the coordination of the International Coconut
Genetic Resources Network (COGENT).
In some ways, field genebanks offer a satisfactory approach to
conservation. The genetic resources under conservation can be readily
accessed and observed, permitting detailed evaluation. However, there
are certain drawbacks that limit their efficiency and threaten their security
(Withers and Engels 1990). The genetic resources are exposed to pests,
diseases and other natural hazards such as drought, weather damage,
human error and vandalism. Nor are they in a condition that is readily
conducive to germplasm exchange. Field genebanks are costly to maintain
and, as a consequence, are prone to economic decisions that may limit
the level of replication of accessions, the quality of maintenance and even
their very survival in times of economic stringency. Even under the best
circumstances, field genebanks require considerable inputs in the form
of land, labour, management and materials (see article on ‘Coconut field
genebank’ in this chapter).
It is now well recognized that the efficient and cost-effective
conservation of any given genepool can be achieved only through the
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CHAPTER 3: Germplasm conservation
143
COCONUT GENETIC RESOURCES
Immature embryos
Experiments were performed with immature embryos sampled from
seednuts of the hybrid PB121 (Malaysian Yellow Dwarf x West African
Tall) 7 to 8 months after pollination (Assy-Bah and Engelmann 1992a).
It was decided to start working with immature embryos, on the
assumption that they would be more likely to withstand cryopreservation
than mature ones, owing to their smaller size and lower degree of
differentiation (Engelmann 1992).
For cryopreservation, embryos were placed for 4 h on pretreatment
medium containing 600 g L -1 glucose and glycerol, sorbitol or
polyethyleneglycol (PEG) 6000 at various concentrations and then
immersed directly in liquid nitrogen. After rapid thawing in a water-
bath at 40°C, embryos were cultured on standard medium (Assy-Bah et
al. 1989) for recovery.
After one month, the survival of non-cryopreserved embryos was
high for all preculture conditions tested, ranging from 73 to 100%. In the
case of cryopreserved embryos, lower survival, ranging between 10 and
43%, was obtained when glycerol at 5 or 10% or sorbitol at 10% was
used in the preculture medium. However, numerous abnormalities were
observed in the further development of non-cryopserved and
cryopreserved embryos, and only few fully developed, normal plantlets
could be obtained. This was because conditions for their in vitro culture
were not mastered (Engelmann and Assy-Bah 1992).
Mature embryos
Experiments were performed with mature embryos sampled from the
seednuts of the hybrid PB121; Cameroon Red Dwarf (CRD); Rennell Tall
(RT); and Indian Tall (IT), 10 to 12 months after pollination (Assy-Bah
and Engelmann 1992b).
For cryopreservation, embryos were placed in open Petri dishes
without culture medium and dehydrated for 4 h in the air current of the
laminar flow cabinet at room temperature. They were then transferred
to open Petri dishes with the medium employed for pretreatment of
immature embryos containing 600 g L-1 glucose and 15% glycerol (Assy-
Bah and Engelmann 1992a), and dehydrated for an additional period of
11 to 20 h. Hence, the total duration of the pretreatment ranged from 15
to 24 h. Embryos were then placed in 2 ml cryotubes and immersed directly
in liquid nitrogen. After rapid thawing in a 40°C water-bath, embryos
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CHAPTER 3: Germplasm conservation
Plumules
Plumules represent a potentially interesting material for cryopreservation
because they are of small size (< 1mm3), they are mostly composed of
meristematic cells and it is possible to regenerate whole plantlets from in
vitro cultured plumules (Malaurie et al. 2002b). Cryopreservation
experiments were performed using the encapsulation-dehydration and
encapsulation-vitrification techniques.
With the encapsulation-dehydration technique, excised plumules were
encapsulated in alginate beads, pregrown for 2-3 days in medium
containing 0.5 to 1.0 M sucrose, desiccated to 0.5-0.2 % moisture content
and cryopreserved. Depending on the experiments, survival after
cryopreservation could reach up to 67%, but only a limited number of
frozen plumules could give rise to whole in vitro plantlets (Malaurie and
Borges 2001; N’Nan et al. 2002). Preliminary experiments performed with
the encapsulation-vitrification technique (Sakai et al. 2000) showed that
up to 20% of cryopreserved plumules could survive after freezing
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COCONUT GENETIC RESOURCES
References
Assy-Bah, B and F Engelmann. 1992a. Cryopreservation of immature
embryos of coconut (Cocos nucifera L.). CryoLetters 13:67-74.
Assy-Bah, B and F Engelmann. 1992b. Cryopreservation of mature
embryos of coconut (Cocos nucifera L.) and subsequent regeneration
of plantlets. CryoLetters 13:117-126.
Assy-Bah, B, T Durand-Gasselin, F Engelmann and C Pannetier. 1989.
Culture in vitro d’embryons zygotiques de cocotier (Cocos nucifera L.).
Methode, révisée et simplifiée, d’obtention de plants de cocotiers
transférables au champ. Oléagineux 44:515-523
Batugal, PA and F Engelmann (eds.). 1998. Coconut embryo in vitro cul-
ture. Proceedings of the First Workshop on Embryo Culture, Banao,
Guinobatan, Albay, Philippines, 27-31 October 1997. IPGRI-APO,
Serdang, Selangor, Malaysia.
Chin, HF and EH Roberts (eds.). 1980. Recalcitrant crop seeds. Tropical
Press Sdn. Bhd., Kuala Lumpur, Malaysia.
Chin, HF, B Krishnapillay and YL Hor. 1989. A note on the
cryopreservation of embryos of coconut (Cocos nucifera L. var. Mawa).
Pertanika 12:183-186.
Engelmann, F. 1992. Cryopreservation of embryos. Pp. 281-290. In: Y
Dattée, C Dumas and A Gallais (eds). Reproductive biology and plant
breeding. Springer Verlag, Berlin.
Engelmann, F. 1997. In vitro conservation methods. Pp. 119-162. In: BV
Ford-Lloyd, JH Newburry and JA Callow (eds). Biotechnology and
plant genetic Resources: Conservation and use. CAB International,
Wallingford, UK.
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147
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148
CHAPTER 3: Germplasm conservation
Introduction
Coconut genetic diversity present in farming systems has been maintained
through the combined action of natural and human selection and
management. Food culture of specific communities also affects selection
of preferred culinary traits. In the process of planting, managing,
selecting seednuts, harvesting and marketing- farmers, in turn, make
decisions on their crops that affect the genetic diversity of the crop
populations. Over time, a farmer may alter the genetic structure of a
crop population by selecting for plants with preferred agro-morphological
or quality characteristics (Jarvis and Hodgkin 2000). Thus, coconut
landraces may be a product of farmer selection as well as farmer breeding
(Riley 1996).
Coconut varieties are grown by resource poor farmers around the
world for a diversity of uses. Home consumption, local markets, for
industrial processing, and medicinal use are only a few. Farmers search
for locally adapted coconut cultivars for diverse environmental niches.
Many varieties are adapted to particular micro-niches including climatic
and edaphic stressed environments. Farmer preferences for specific size,
aroma, nut water quality, colour, taste and type also demand diverse
coconut varieties. The continued use of landraces contributes to stable
food production and income especially in marginal environments where
impacts of modern varieties are limited or less effective. The Convention
on Biological Diversity (CBD) has recognized the continued maintenance
of traditional varieties in situ as an essential component of sustainable
agricultural development. Diversity of local coconut varieties is the
foundation upon which coconut breeding depends for the creation of
new varieties and is therefore, a critical aspect of food security for coconut-
based economies.
To develop successful conservation approach, knowledge of plant
biology is essential. Coconut (Cocos nucifera L.) is essentially a tree crop of
the humid tropics. It is able to adapt to a wide range of soil and climatic
conditions. The natural habitat of coconut is the coastal belt of the tropics
where it flourishes in sea-washed littoral sand with constant motion of
underground current of water in a saline atmosphere (Khan et al. 1994).
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151
COCONUT GENETIC RESOURCES
152
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Genetic erosion. It is better to select sites with less threat of genetic erosion
to increase the life of conservation efforts.
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COCONUT GENETIC RESOURCES
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CHAPTER 3: Germplasm conservation
The above activities will raise awareness on local crop diversity and help
to understand the value of local crop diversity. Diversity fair and CBR
are a few participatory methods, which can strengthen the local capacity
to document taxonomic data and traditional knowledge on crop genetic
resources (CGR) with the following specific objectives of:
• Creating awareness and developing sense of community
ownership on biodiversity;
• Locating unique, rare and culturally significant cultivars and their
custodians;
• Enhancing access of genetic materials and information on local
crop diversity;
• Developing options of adding benefits and support biodiversity-
based livelihoods;
• Building local capacity for monitoring diversity in situ and
promoting on-farm management of local crop diversity;
• Making aware on and protecting economically important
biowealth against biopiracy.
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COCONUT GENETIC RESOURCES
local communities (Jarvis et al. 2000). In order for local coconut farming
systems to be maintained by farmers, the genetic resources must have
some value and/or be competitive to other options a farmer might have.
Understanding the contribution of coconut cultivars to livelihoods,
nutrition and food culture is needed to formulate plans that will: (i)
support local germplasm supply systems, (ii) improve PVS and PPB, (iii)
develop new markets for coconut cultivars and plant parts, (iv) promote
appropriate conservation value and education, (v) create methodologies
for integrating locally adapted coconut cultivars and farmer preferences
into development and extension projects, and (vi) advise on appropriate
policies that support the management and use of crop diversity in
agroecosystems (IPGRI 2001).
Two options were used in adding benefits: the first, on adding benefits
through participatory variety selection and plant breeding, seednuts
networks and grassroots strengthening; and the second, on adding
benefits through public awareness, better processing, marketing, policy
incentives, and education in the formal sector (Jarvis et al. 1998).
The first option is to seek improved quality, disease resistance, high
yield, better taste, ease in harvesting and other preferred traits through
breeding; seed networks and modified farming systems. In modern
agricultural production systems, Smale and her colleagues (2001) argued
that crop genetic resistance to disease can be enhanced by policies that
encourage: (1) cultivation of a mosaic of varieties with different genetic
mechanisms for combating a pest, (2) cultivation of specific varieties that
contain multiple genetic mechanisms for resistance, or (3) continual
replacement of varieties in farmers’ fields by more recent releases or
exchange of farmers’ cultivars that carry new genetic sources of resistance.
The second option includes adding value to coconut resources so that
the demand for the material or some derived product may be increased.
These diverse options will emerge when the community, researchers and
developmental institutions are directly involved in monitoring local crop
diversity using CBR and link with crop improvement, seed and market
networks for adding benefits on local resources. If diversity can be more
highly valued in the marketplace through the creation of consumer
demand for certain products, and farmers can access those markets, their
incentives to maintain diversity may be increased.
The concept of commodity chain applies with coconut as the approach
is not restricted to increase in productivity alone but rather that crop is
considered ‘as a whole’ in all aspects of a chain (or a system), from its
production through its consumption. This concept of value addition adds
new dimensions to the traditional agricultural research agenda and it
implies the involvement of a full range of new partners, who are not
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CHAPTER 3: Germplasm conservation
All this requires greater collaboration between formal and informal sectors
with more benefit-oriented activities. Promising results are emerging from
all countries and many methods and approaches have been developed
which are compiled now to publish guidelines for on-farm conservation
of agrobiodiversity (Jarvis et al. 2000). These outputs must be evaluated
and monitored in terms of effectiveness and sustainability of coconut
genetic resources conservation and utilization.
References
Altieri, MA and LC Merrick. 1988. In situ conservation of crop genetic
resources through maintenance of traditional farming systems.
Economic Botany, 41:86-96.
Batugal, PA and V Ramanatha Rao (eds). 1998. Coconut breeding. Papers
157
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159
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Introduction
About 96% of coconuts are grown by smallholders tending four hectares
or less of land which many of them do not own. About 85% of the 12
million hectares of coconuts are grown in the Asia Pacific region. Coconut
farmers are marginalized: they grow coconut and associated crops in
rainfed and often environmentally fragile areas; most live below the
poverty line; are resource-poor; considered non-bankable by the credit
sector; and they do not have political clout to influence public and private
sector policy. Even in many of the large coconut producing countries,
research support to this sector is inadequate if not nil.
IPGRI believes that if resource-poor farmers are empowered, they
could improve their lives and lift their socioeconomic status over the
poverty line. To address the urgent need of empowering poor coconut
farmers and helping the long neglected coconut sector, IPGRI requested
- and the Asian Development Bank (ADB) awarded - a Regional Technical
Assistance (RETA) grant to IPGRI (RETA 6005 for 2000-2004) entitled,
‘Developing sustainable coconut-based income-generating technologies
in poor rural communities’. IPGRI coordinated the project involving eight
national coconut research agencies, three non-governmental
organizations (NGOs) and 25 community-based organizations (CBOs)
in eight Asia Pacific countries (Bangladesh, India, Sri Lanka, Indonesia,
the Philippines, Vietnam, Fiji and Papua New Guinea) as shown in Annex
1.
Objective
The project objective is to develop efficient village-level, income-generating
technologies and strategies that are technically feasible, financially viable,
socially acceptable and environmentally safe, using COGENT’s three-
pronged strategy: 1) production and marketing of high-value coconut
products from all parts of the coconut – the kernel, husk, shell, wood,
water and leaves); 2) intercropping cash and food security crops with
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COCONUT GENETIC RESOURCES
Activities
Prior to the release of project funds to IPGRI in May 2002, the UK’s
Department for International Development (DFID) supported the
identification and socioeconomic profiling of 89 coconut growing
communities from which 24 communities were chosen as project sites.
IPGRI and its partner organizations also organized the project team and
technical support groups in each country using IPGRI’s and national
counterpart funds.
Upon release of the ADB funds, the following activities were conducted:
1. Establishment and strengthening of 25 CBOs to manage the
project at the community level. Special emphasis was made on
the design of the CBOs to ensure broad access and participation
of several categories of stakeholders, including women;
2. Establishment of a microcredit system and provision of initial
revolving fund for each of the 25 CBOs;
3. Market surveys to identify marketable products and development
of market channels to make such markets sustainable;
4. Development and implementation of farmers’ and women’s action
plans for income-generating activities;
5. Development of training manuals on income-generating
technologies and the development of instruments for analysis and
promotion of viable technologies;
6. Development of community-managed income-generating coconut
seedling nurseries and the documentation, enhancement and
conservation of selected and promising local and introduced
coconut varieties;
7. Training of coconut farmers, women and village-level
entrepreneurs on income-generating technologies;
8. Evaluation of inexpensive village-level oil mills and equipment
for producing high-value coconut products;
9. Development and viability testing of the production and marketing
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CHAPTER 3: Germplasm conservation
Project outputs
The results of the project proved that poor coconut farmers’ and
socioeconomically disadvantaged women’s lives could be improved if
they were properly trained, empowered and given access to opportunities
and resources, in this case the coconut-based village-level income
generating activities, technologies and related support systems. In a
period of only three years, 25 farmer CBOs in eight countries with a total
of 5715 members were established and strengthened; 17 392 farmers and
women trained on various income-generating activities; 43 community-
managed coconut and 14 multi-purpose seedling nurseries established;
65 501 coconut seednuts of local varieties sown in community-managed
nurseries; 64 521 coconut seedlings of farmers’ and introduced high-value
varieties planted and conserved on-farm; 1593 farmers and women
involved in coconut-based livestock production trials, 4039 in
intercropping trials and 2005 in production of high-value coconut
products; and about 140 public awareness materials developed and
disseminated. For details of these achievements, please see Annex 3.
In the production of high-value coconut products, more than 2000
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COCONUT GENETIC RESOURCES
CBO members, 74% of whom are women, participated. There were 210
participants in Bangladesh, 17 in Fiji, 615 in India, 100 in Indonesia, 89
in Papua New Guinea, 378 in the Philippines, 168 in Sri Lanka and 428
in Vietnam. CBO members, trained and working as individuals or in
groups, produced cooking oil, virgin coconut oil for body and hair lotion,
kernel-based detergent and bath soaps, fibre-based ropes, doormats and
geotextile, shell- and wood-based cooking utensils and exportable
handicrafts, coconut water- and sap-based vinegar and sugar, and
coconut leaf-based decorative baskets, hats and other handicrafts.
Depending on how many capable members of the participating families
were involved, they increased their income by 3-5 times compared to
their previous income from copra, securing for them a steady source of
additional income and helping them rise above the poverty line. Equally
important, this project intervention has provided employment
opportunities to formerly unemployed and underemployed rural women
resulting in enhanced self-esteem, and economic and social
empowerment.
For intercropping, 4039 farmers and their households participated
in intercropping trials consisting of 115 in Bangladesh, 454 in Fiji, 759 in
India, 748 in Indonesia, 418 in Papua New Guinea, 473 in the Philippines,
328 in Sri Lanka, and 744 in Vietnam. Net incomes from planting cash
crops in small plots of land between coconuts have significantly increased.
Not only were income and total farm productivity enhanced, but also
food security and nutrition since families planted, grew and ate their
own produce.
For animal production, a total of 1593 CBO members, 58% of whom
are women, raised a variety of livestock like quails, poultry, ducks, rabbits,
goats, swine and cattle. There were 185 participants in Bangladesh, 32
in Fiji, 370 in India, 82 in Indonesia, 126 in Papua New Guinea, 334 in
the Philippines, 197 in Sri Lanka and 267 in Vietnam. The integration of
livestock production in coconut farming is still in its early stages, but
many CBO members have already adopted the animal production
technologies introduced by the project as components of their sustainable
livelihood activities. The initial results showed tremendous potential not
only in generating income but more so in improving nutrition.
To support the conservation and promotion of coconut diversity, 43
community-managed coconut and 14 multi-purpose seedling nurseries
were established; 65 501 coconut seednuts of local varieties sown in these
nurseries; and 64 521 coconut seedlings of farmers’ and introduced high-
value varieties planted and conserved on farm. The 24 communities
(excluding the Maitum site in the Philippines) also identified and
characterized 89 important local varieties through farmers’ diversity fairs.
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Project benefits
To determine the benefits and the initial impact of the project, a two-
stage assessment was carried out: (1) rapid assessment survey involving
project leaders and heads of implementing research agencies, NGOs and
CBOs; and (2) more detailed survey involving farmers and other members
of the participating communities in the project. Based on these surveys,
the following project benefits were identified:
1. The project provided an effective IARC-NARS-CBO mechanism
for promoting income generating activities in previously resource-
poor coconut growing communities in their countries; and in
providing the five needed capitals for sustainable livelihoods (i.e.,
physical, natural, financial, social and human capitals) to make
these income generating activities sustainable. Most of these
technologies and resources were not available to the 25 project
participating communities in eight countries before the project;
2. The project provided farmers access to efficient but affordable
village-level coconut processing equipment, machinery and
technologies for producing high-value coconut products which
were sourced from several COGENT member countries. In some
communities, the local government provided the needed
infrastructure and other facilities such as roads, training centres
and electrical power connections to support the project;
3. The project enriched the communities’ natural capital in the form
of important local coconut varieties which farmers identified and
characterized with the help of researchers and breeders and
propagated them in community-managed nurseries. The project
also facilitated the introduction of high-value coconut varieties in
the community thereby enhancing the diversity of their coconut
germplasm;
4. The project enhanced the communities’ social capital by
organizing the farmers into CBOs and strengthening and enabling
these organizations to effectively plan, manage and implement
income generating activities for its constituents;
5. The project provided the needed financial capital in the form of
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COCONUT GENETIC RESOURCES
Project impact
The same surveys indicated how the benefits generated by the project
affected the lives of coconut farmers, particularly their socioeconomic
status. The identified initial impacts of the project include:
Impact on communities
At the community level, the impact on women has been particularly
tremendous. The project enabled previously destitute and unemployed
or underemployed women to earn money, shed inhibitions and
empowered them to make informed decisions affecting their lives and,
in the process, raising their self-esteem. Unemployment rate in the
communities was significantly reduced as formerly idle labour was put
into productive use in various coconut-based income generating activities.
The project also encouraged community members to work in groups as
agricultural entrepreneurs, developing their business and group problem
solving skills.
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Impact on NARS
The survey respondents agreed that the project was able to enhance the
service capacity of the research implementing agencies in each of the
eight countries. The project improved the ‘bridging’ or facilitating role of
the implementing research institute by providing their scientists,
researchers and extension workers with the opportunity to test and
disseminate to resource-poor coconut growing communities
recommended technologies produced by their research programmes. This
has given the implementing agencies’ staff the needed exposure to actual
grassroots work and boost their confidence about their research. Some
project leaders also said that because of the various training and other
capacity-building activities conducted under the project, many of their
staff acquired new knowledge and skills, thereby “making them better
scientists and researchers”.
The establishment of community-managed nurseries enabled the
research institutes to conserve important local and introduced high-value
coconut varieties and promote their in situ and on-farm conservation
efforts. Also, the establishment and effective management of village-level
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CHAPTER 3: Germplasm conservation
Sustainability
Sustaining impact when a project phases out is a major concern especially
of those dealing with action research for development, in this case,
reducing poverty through the introduction and testing of various coconut-
based income-generating technologies. Under the project, this concern
was consciously addressed by adopting and integrating into its design
the sustainable livelihoods framework, which essentially calls for
identifying and implementing interventions to enhance the five capitals
(i.e., human, natural, social, physical and financial) as well as formulating
sustainability indicators for each intervention.
Human capital
In the project, human capital was enhanced through the conduct of
various training and capacity-building activities aimed at two essential
objectives: (1) to organize farmers into formal CBOs and strengthen these
organizations so that they would be able to effectively manage their own
affairs without the help of ‘outsiders’ even after the project terminates;
and (2) to build the capacity and skills of individual farmers to undertake
various income-generating activities to enable them to fully and profitably
engage in coconut-based enterprises in the future. Of course, building-
up the capacity of CBOs and its members through training is just one
aspect of enhancing human capital to ensure the sustainability of project
impact. Another equally important aspect is giving farmers a sense of
self-confidence, self-realization and fulfillment, which goes hand-in-hand
with training to tap into their potentials and develop their skills, which
the project helped achieve. Once these values are ingrained in them,
they would have the motivation and the spirit to continue to further
develop themselves and thereby contribute to the development of the
community in general.
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COCONUT GENETIC RESOURCES
Natural capital
It is an accepted fact that in order for the benefits and impact of this
project to endure long after it has terminated, the component central to
its strategy (i.e., coconut diversity) will have to be continuously enhanced.
Thus, the project has established a mechanism through community-
managed seedling nurseries that would assure the continuous on-farm
propagation of high-value and suitable coconut varieties. Catering to
both coconuts and various other intercrops, these integrated nurseries
would form the platform on which a self-sustaining, non-government
dependent, informal and village-level seed and seedling distribution
system could be built on. Such a system, which would benefit both the
farmers – as they would also earn from them – and the government –
they would free scarce resources needed to maintain such nurseries –
would ensure that coconut diversity, as well as the diversity of various
cash, food security and feed crops, in the communities would continue
to improve and flourish.
Social capital
The whole gamut of people, tradition and culture comprise what we call
a community’s ‘social fabric’. In the implementation of the project, the
enhancement of the social capital was taken into account by introducing
activities and technologies that are socially acceptable – those that do
not run counter to the existing norms of the people and the community.
This ensures that no friction is created between the project interventions
and the people who were supposed to adopt them. In Huntu, for example,
a predominantly Muslim project site in Indonesia, swine was not
introduced as livestock despite market surveys showing that pork has a
high demand in the neighbouring villages as this is in conflict with the
dominant religion in the area. Efforts like this would ensure that
interventions introduced would continue to be supported by the
community.
Under the project, individual farmers were encouraged to form
common-interest groups in undertaking similar income-generating
activities, which promoted social cohesiveness and group unity. In the
coconut fibre processing community of Tam Quan Nam in Vietnam, for
example, CBO members established a common area for dehusking,
decorticating and collecting fibre. Each member of the group takes turns
in operating and maintaining the machinery and the work area itself,
and as ‘payment’ they get processed coconut fibre which they then bring
home to use in producing ropes, mats, geotextile and other fibre-based
products. These are then collected and sold by the CBO on behalf of its
members, with part of the proceeds going to the further upkeep of the
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Physical capital
It goes without saying that infrastructure, machinery, equipment and
other physical facilities are important in a technology-based poverty
reduction project such as this. Under the project, the physical capital of
the communities was enhanced by introducing simple, inexpensive,
village-level machinery and equipment to process coconuts into high-
value, marketable products. This was a strategy adopted by the project
to ensure that successful technologies would easily be replicated, adapted
and expanded by the communities themselves at minimal cost but with
maximum benefit to its constituents, even when the project ended.
The project also promoted the interchange of technologies between
and among countries. The Vietnam model of the simple single-ply rope
making machine could now be seen in other countries which participated
in the project and who did not have this machine before. Another
example is the simple coconut virgin oil extracting machine of Sri Lanka,
which has been disseminated to other countries as well. Some of these
technologies and machines, shared in good faith by countries, have been
modified and adapted to suit the local conditions of the communities,
usually through the initiative of the CBOs themselves and with some
support from the national implementing agencies. These simple but highly
efficient and effective technologies, machinery and equipment would
provide the motivation for the communities and the farmers to continue
to adopt them since they provide additional income at minimum cost –
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COCONUT GENETIC RESOURCES
Financial capital
One of the main reasons why small-scale coconut farmers remain poor
is because they have very limited access to financial resources to diversify
and invest in higher-return, high-value income generating activities or
enterprises. As mentioned, most coconut farmers are marginalized –
with no land and collateral to obtain loans and are considered non-
bankable by formal lending institutions. This is also the reason why most
‘relief’ or dole-out projects fail – farmers have a very simple concept of
money - when you have it, you spend it, without consideration of paying
it back since it was ‘given’. Although the project provided funds to the
communities, these were mostly in the form of revolving funds for
microcredit that the CBO used to loan-out to members which were repaid
at nominal interest. At the onset of the project, the CBOs were told that
“nothing is free in this project”, that everything would have to be paid
back, except training and capacity building. With this principle in mind,
the CBOs were encouraged to develop their own microcredit lending
system, which would make their revolving fund grow. The establishment
of these microcredit systems provided the ‘non-bankable’ farmers access
to capital which they used to finance their various coconut-based income-
generating activities. This initiative proved successful that some CBOs
have doubled or almost tripled the original seed money given to them by
the project. Moreover, the microcredit system inculcated in the farmers
a sense of ‘pay back’ – meaning they have to work to repay what they
owe and not merely spend their money at whim. Such a system would
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Lessons learned
The lessons learned from the Poverty Reduction project were consolidated
from the various communications, correspondences and meetings with
the Country Project Leaders, Community Coordinators and project
participants; and from the reports submitted, and discussions with other
project staff and stakeholders, including partners and collaborators in
the project sites. Some of the lessons are not entirely new, and many cut
across various topics. There are 33 lesson points, which are listed below
and classified under eight major headings:
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On marketing
26. Encouraging and helping farmers diversify into more than one income-
generating activity or enterprise was better than persuading them to
pursue just one. This not only provides them with more earning
options but more importantly, it spreads out the risks in case one
activity fails or if the market becomes saturated with one of the
products;
27. Poor transport infrastructure (farm-to-market roads) and facilities
negate the benefits realized from increased farm productivity; and
28. Linking with specialized associations or organizations dealing with
product and market development was a good approach in developing
and promoting the products of the CBOs.
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COCONUT GENETIC RESOURCES
Constraints
1. The delayed release of donor funds to IPGRI and consequently to the
implementing agencies which delayed the overall implementation of
the project. This was alleviated by initiating the project using the
counterpart funds of IPGRI and the eight participating national
research organizations;
2. The replacement of the project leader of the Philippines in the middle
of the project and of Fiji close to the end of the project. This was
remedied by the accelerated support to the project through the effort
of consultants and the Project Coordinator;
3. Reservation of some countries in sharing their coconut processing
equipment, machineries and technologies. This was remedied through
the development of a Material Transfer Agreement (MTA) binding
recipient countries not to acquire patents to transferred equipment
and machineries. Interest to share technologies was increased by
convincing more countries to also share their processing technologies
on a reciprocal basis; and
4. Lack of technical staff from national coconut research organizations
to provide adequate technical support to the project. This will be
remedied in the future projects by negotiating with the implementing
agency to provide this much needed technical support.
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Recommendations
1. IPGRI and its partner implementing agencies should regularly monitor
the status of project assets which were transferred to the 25 CBOs
including their use of the project machineries and revolving funds
for income generating activities.
2. The activities in the 25 communities as indicated in item 1 above
should be complemented by additional project activities under the
newly approved IFAD-funded Technical Assistance Grant to IPGRI
entitled ‘Overcoming poverty reduction in coconut growing
communities’ which will involve 15 countries including four of the
previous ADB-funded RETA.
3. IPGRI should institutionalize and enhance sustainability elements by
linking the communities and research organizations with support
groups in the public and private sector.
4. IPGRI should scale up the project by helping countries develop their
research agenda on poverty reduction in coconut growing
communities and loan-based project proposals in order to develop a
critical mass of research to help the neglected coconut sector.
Acknowledgment
IPGRI and COGENT would like to thank the eight NARs organizations,
the three NGOs and the 25 CBOs which collaborated with IPGRI to
implement the project; IFAD in funding the first initiative which identified
initial high-value coconut products and production systems for increasing
farmers’ incomes; DFID in supporting the identification and
socioeconomic profiling of the 25 project sites; and ADB in supporting
the large-scale testing of technologies and strategies, empowerment and
capacity building and overall management of the project. Last but not
least, IPGRI-COGENT would like to thank the over 17 000 poor coconut
farmers and socioeconomically disadvantaged women who organized
themselves and collaborated with each other to improve their lives.
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COCONUT GENETIC RESOURCES
Non-governmental Organizations:
1. Banchte Shekha Foundation, Sri Lanka
2. Peekay Tree Crops Development Foundation, Vayalar, India
3. Siyath Foundation, Sri Lanka
Community-based Organizations:
Bangladesh
1. Bandabila Coconut Community, Bandabila, Jessore District
2. Chandrapara Coconut Community, Chandrapara, Barisal District
3. Banchte Shekha (BS) Coconut Community, Jamira, Khulna District
India
4. Ariyankuppam Community Coconut Farmers’ Association,
Ariyankuppam
5. Pallikkara Community Coconut Development Centre, Pallikkara
6. Vayalar Community Development Centre, Vayalar, Kerala
Sri Lanka
7. Thuthipiritigama Entrepreneurship Development Society,
Thuthipiritigama, Hettipola, Kurunugala, Northwestern Province
8. Womens Savings Effort, Wilpotha, Puttalam, Western Province
9. Dodanduwa Womens Collective, Dodanduwa, Galle, Southern Prov-
ince
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CHAPTER 3: Germplasm conservation
Indonesia
10. Kelompok Tani Kelapa Harapan Wori, Wori, Wori District, Minahasa
Regent, North Sulawesi
11. Kelompok Tani Kelapa Momosad Nonapan I, Nonapan, Poigor Dis-
trict, Bolaang Mongondow Regent, North Sulawesi
12. Kelompok Tani Kelapa Huyula Huntu, Huntu-Batudaa, Bongomeme
District, Donggala Regent, Gorontalo Province
Philippines
13. Malapad Integrated Livelihood Cooperative, Malapad, Real, Quezon
14. Bahay Patol Agrarian Reform Beneficiaries Multi-Purpose Coopera-
tive, Caliling, Cauayan, Negros Occidental
15. Linabu Coconut Planters’ Association, Linabu, Misamis Oriental
16. Fleischer Estate Integrated Marketing Cooperative, Old Poblacion,
Maitum, Saranggani (associated CBO)
Vietnam
17. Hung Phong/Phong Nam Coconut Communes, Hung Phong and
Phong Nam, Giong Trom District, Ben Tre Province
18. Xuan Dong Coconut Community, Xuan Dong, Tien Giang Province
19. Tam Quan Nam Coconut Community, Tam Quan Nam, Binh Dinh
Province
Fiji
20. Tukavesi Development Association, Tukavesi, Savusavu
21. Belego Multiracial Farmers Association, Belego, Wailevo, Savusavu
22. Cicia Women’s Group, Cicia Island
179
Annex 2. Summary of activities and target outputs of the eight countries participating in COGENT’s
Poverty Reduction Project (January 2002 to December 2004)
180
Target Outputs
Project Activities India
Papua Ne
Sri Lanka c/o CPCRI c/o Peekay Bangladesh Indonesia Philippines Fiji
Guinea
(2 sites) Tree (1 site)
I. Capacity Building
A. Establishment &
strengthening of
Community-Based
Organizations (CBOs)
(CBO incorporated and 3 CBOs 2 CBOs 1 CBO 3 CBOs 3 CBOs 3 CBOs 3 CBOs 3 CBOs
registered with
appropriate government
agency)
B. Training of Per project Per project Per project Per project Per project Per project Per project Per project
COCONUT GENETIC RESOURCES
officers/leaders and site: site: site: site: site: site: site: site:
members on : 10 officers/ 10 officers/ 10 officers/ 10 officers/ 10 officers/ 10 officers/ 10 officers/ 10 officers/
(1) CBO management leaders leaders leaders leaders leaders leaders leaders leaders
and responsibilities; at least 100 at least 100 at least 100 at least 100 at least 100 at least 100 at least 100 at least 100
and members members members members members members members members
(2) Microcredit system
and management
C. Identification of Per project Per project Per project Per project Per project Per project Per project Per project
marketable products site: site: site: site: site: site: site: site:
At least: At least: At least: At least: At least: At least: At least: At least:
3 high value 3 high value 3 high value 3 high value 3 high value 3 high value 3 high value 3 high valu
coconut coconut coconut coconut coconut coconut coconut coconut
products products products products products products products products
3 crop 3 crop 3 crop 3 crop 3 crop 3 crop 3 crop 3 crop
products products products products products products products products
3 livestock 3 livestock 3 livestock 3 livestock 3 livestock 3 livestock 3 livestock 3 livestock
products products products products products products products products
D. Evaluation of oil Per country: Per country: - Per country: Per country: Per country: Per country: Per country:
extraction machines 2 machines 2 machines 2 machines 2 machines 2 machines 2 machines 2 machines
E. Evaluation of other Per project Per project Per project Per project Per project Per project Per project Per project
processing machines site: site: site: site: site: site: site: site:
(Each country should At least 1 At least 1 At least 1 At least 1 At least 1 At least 1 At least 1 At least 1
evaluate at least 3 of 5 machinery for machinery for machinery for machinery for machinery for machinery for machinery for machinery fo
machines for meat, fibre, meat, fibre, meat, fibre, meat, fibre, meat, fibre, meat, fibre, meat, fibre, meat, fibre, meat, fibre,
shell, leaf & wood shell, leaf or shell, leaf or shell, leaf or shell, leaf or shell, leaf or shell, leaf or shell, leaf or shell, leaf or
products) wood product wood product wood product wood product wood product wood product wood product wood produc
Project Activities
F. Development of action
plans for income-
Sri Lanka
generating activities
1. Farmers’ action plan 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project
2. Women’s action plan 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project site 1 per project
G. Fabrication of selected Per country: Per project site: Per project site: Per country: Per country: Per country: Per country: Per country:
inexpensive processing 1-3 machines 1-3 machines 1-3 machines 1-3 machines 1-3 machines 1-3 machines 1-3 machines 1-3 machine
machines from (E) above
(2 sites)
c/o CPCRI
II. Training of Farmers and Women
India
A. High-value coconut Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
products 100 100 100 100 100 100 100 100
participants participants participants participants participants participants participants participants
with at least with at least with at least with at least with at least with at least with at least with at leas
20% women 20% women 20% women 20% women 20% women 20% women 20% women 20% wome
c/o Peekay
Tree (1 site)
at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2
researchers researchers researchers researchers researchers researchers researchers researchers
and 4 and 4 and 4 and 4 and 4 and 4 and 4 and 4
extension extension extension extension extension extension extension extension
workers workers workers workers workers workers workers workers
B. Intercropping Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
100 100 100 100 100 100 100 100
Bangladesh
participants participants participants participants participants participants participants participants
with at least with at least with at least with at least with at least with at least with at least with at leas
20% women 20% women 20% women 20% women 20% women 20% women 20% women 20% wome
at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2
researchers & researchers & researchers & researchers & researchers & researchers & researchers & researchers
4 extension 4 extension 4 extension 4 extension 4 extension 4 extension 4 extension 4 extension
workers workers workers workers workers workers workers workers
Indonesia
C. Livestock production
Target Outputs
Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
100 100 100 100 100 100 100 100
participants participants participants participants participants participants participants participants
with at least with at least with at least with at least with at least with at least with at least with at leas
20% women 20% women 20% women 20% women 20% women 20% women 20% women 20% wome
at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2 at least 2
researchers & researchers & researchers & researchers & researchers & researchers & researchers & researchers
Philippines
181
CHAPTER 3: Germplasm conservation
Fiji
Guinea
Papua Ne
Target Outputs
Project Activities India
Papua Ne
Sri Lanka c/o CPCRI c/o Peekay Bangladesh Indonesia Philippines Fiji
182
Guinea
(2 sites) Tree (1 site)
D. Feed formulation Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
At least 5 At least 5 At least 5 At least 5 At least 5 At least 5 At least 5 At least 5
farmers trained farmers trained farmers trained farmers trained farmers trained farmers trained farmers trained farmers train
in item (C) in item (C) in item (C) in item (C) in item (C) in item (C) in item (C) in item (C)
above above above above above above above above
B. Food security crops Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
3 types of 3 types of 3 types of 3 types of 3 types of 3 types of 3 types of 3 types of
crops crops crops crops crops crops crops crops
at least 50 at least 50 at least 50 at least 50 at least 50 at least 50 at least 50 at least 50
farmers farmers farmers farmers farmers farmers farmers farmers
involved involved involved involved involved involved involved involved
C. Sourcing and CRISL (for CPCRI Coconut BARI Agricultural PCA Wainigata PNGCCRI
propagation of quality coconut Kerala Agri. Development BADC University Research NARI
plant materials for seednuts) University Board DAE and State Station DAL
intercrops identified in Agrarian (KAU) CPCRI Hort Centre Government local
(A) and (B) above services Tamil Nadu Agricultural extension
centers Agri. University services
University Department compound
(TNAU)
State Gov’t
Centers
Target Outputs
Project Activities India
Papua Ne
Sri Lanka c/o CPCRI c/o Peekay Bangladesh Indonesia Philippines Fiji
Guinea
(2 sites) Tree (1 site)
V. Livestock
A. Livestock production Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
3 types of 3 types of 3 types of 3 types of 3 types of 3 types of 3 types of 3 types of
livestock livestock livestock livestock livestock livestock livestock livestock
involving at involving at involving at involving at involving at involving at involving at involving at
least 50 least 50 least 50 least 50 least 50 least 50 least 50 least 50
farmers farmers farmers farmers farmers farmers farmers farmers
B. Pasture, fodder and Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
legumes At least 1 type At least 1 type At least 1 type At least 1 type At least 1 type At least 1 type At least 1 type At least 1 typ
each of each of each of each of each of each of each of each of
pasture, pasture, pasture, pasture, pasture, pasture, pasture, pasture,
legume & legume & legume & legume & legume & legume & legume & legume &
fodder, fodder, fodder, fodder, fodder, fodder, fodder, fodder,
involving at involving at involving at involving at involving at involving at involving at involving at
least 50 least 50 least 50 least 50 least 50 least 50 least 50 least 50
farmers farmers farmers farmers farmers farmers farmers farmers
C. Local feed formulation Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
by each CBO At least 1 feed At least 1 feed At least 1 feed At least 1 feed At least 1 feed At least 1 feed At least 1 feed At least 1 fee
formulation per formulation per formulation per formulation per formulation per formulation per formulation per formulation p
type of type of type of type of type of type of type of type of
livestock livestock livestock livestock livestock livestock livestock livestock
D. Sourcing and CRISL KAU KAU Livestock Livestock DAR cattle Animal Health Dept. of Ag
multiplication of quality VRISL TNAU Animal Research State dispersal & Production & Livestock
livestock for loan or Local State Husbandry Institute Government programme Division research
distribution livestock Government Department Center
distribution Centers National
Suggestion: CBOs should programmes banks’ loan
explore the possibility of programmes
linking with appropriate Nabard
NGOs for this activity
183
CHAPTER 3: Germplasm conservation
Target Outputs
Project Activities India
Papua Ne
Sri Lanka c/o CPCRI c/o Peekay Bangladesh Indonesia Philippines Fiji
184
Guinea
(2 sites) Tree (1 site)
VI. Conservation and Enhancement of Coconut Diversity
A. Characterization of CRISL CPCRI Survey to be BARI scientists RICP and PCA-ZRC to Taveuni Survey to be
existing coconut scientists to scientists to conducted to characterize CRIEC conduct Coconut Center conducted
varieties in each characterize characterize coconut scientists to varietal & Wainigata
project site using: coconut coconut varieties in characterize surveys in Research
1. Farmers’ protocol (to varieties in varieties in each each site using coconut each site Station
be provided by each site site the varieties in each scientists to
COGENT) STANTECH site characterize
2. STANTECH protocol Manual coconut
3. Molecular markers - varieties in each
COGENT to provide site
additional budget
(except those with
asterisk*) *
B. Identification of high- Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
COCONUT GENETIC RESOURCES
C. Establishment of Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
community-managed 2 coconut 2 coconut 2 coconut 2 coconut 2 coconut 2 coconut 2 coconut 2 coconut
nurseries for nurseries nurseries nurseries nurseries nurseries nurseries nurseries nurseries
propagation & sale of: 1 integrated 1 integrated 1 integrated 1 integrated 1 integrated 1 integrated 1 integrated 1 integrated
1 Coconuts nursery for nursery for nursery for nursery for nursery for nursery for nursery for nursery for
2. Intercrops intercrops intercrops intercrops intercrops intercrops intercrops intercrops intercrops
3. Pasture/Fodder/ and pasture/ and pasture/ and pasture/ and pasture/ and pasture/ and and pasture/ and pasture
Legumes fodder/ fodder/ fodder/ fodder/ fodder/ pasture/fodde fodder/ fodder/
legumes legumes legumes legumes legumes r/ legumes legumes legumes
D. Planting of 5 coconut Per project site Per project site Per project site Per project site Per project site Per project site Per project site Per project s
seedlings per year per year: per year: per year: per year: per year: per year: per year: per year:
5 seedlings per 5 seedlings per 5 seedlings per 5 seedlings per 5 seedlings per 5 seedlings per 5 seedlings per 5 seedlings p
100 farmer/ 100 farmer/ 100 farmer/ 100 farmer/ 100 farmer/ 100 farmer 100 farmer/ 100 farmer/
women women women women women /women women women
participants participants participants participants participants participants participants participants
C. Publication of scientific At least 1 At least 1 At least 1 At least 1 3 scientific 2 scientific 3 scientific 3 scientific
paper scientific paper scientific paper scientific paper scientific paper papers per papers per papers per papers per
per year per year per year per year year year year year
D. Publication of public At least 2 per 6 in the local & 3 in the local & At least 2 per 6 in the local & 6 in the local & 3 in the 3 in the local
awareness materials in year national dailies national dailies year national dailies national dailies national dailies national daili
the national dailies per year per year per year per year per year per year
E. Field days At least twice At least twice At least twice At least twice At least twice At least twice At least twice At least twice
per year per per year per per year per site per year per site per year per site per year per per year per per year per
site site site site site
VIII. Project Meetings and Site Visits
A. Meeting of CBO Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
officers/ leaders Once a month Once a month Once a month Once a month Once a month Once a month Once a month Once a mont
with report with report with report with report with report with report with report with report
submitted submitted submitted submitted submitted submitted submitted submitted
B. Meeting of CBO Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
members Once per year Once per year Once per year Once per year Once per year Once per year Once per year Once per ye
with report with report with report with report with report with report with report with report
submitted submitted submitted submitted submitted submitted submitted submitted
C. Site visits by project Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project site: Per project si
leader At least once At least once At least once At least once At least once At least once At least once At least once
every 2 months every 2 months every 2 months every 2 months every 2 months every 2 months every 2 months every 2 mon
D. Group meetings of Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year
country project leader (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual
and three community
coordinators
E. Meetings of project Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year Twice a year
leader with project (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual) (semiannual
technical support
team
185
CHAPTER 3: Germplasm conservation
Target Outputs
186
Project Activities India
Papua Ne
Sri Lanka c/o CPCRI c/o Peekay Bangladesh Indonesia Philippines Fiji
Guinea
(2 sites) Tree (1 site)
IX. Reporting
th th th th th th th th
A. Report of community 30 of every 30 of every 30 of every 30 of every 30 of every 30 of every 30 of every 30 of every
coordinator to project month month month month month month month month
leader
B. Technical and Every year: Every year: Every year: Every year: Every year: Every year: Every year: Every year:
financial report of 15 June and 15 15 June and 15 15 June and 15 15 June and 15 15 June and 15 15 June and 15 15 June and 15 15 June and
project leader to IPGRI Dec Dec Dec Dec Dec Dec Dec Dec
X. Provision of equipment
1
COCONUT GENETIC RESOURCES
1
The computer and colour printer are for the exclusive use of the project leaders for official communications/e-mail, report preparations, design and printing of Technoguides/
Extension Bulletins (with coloured cover pages), production of training materials and other public awareness materials and/or for other purposes related to the implementation
of the project. If the project leader is changed or replaced, the said equipment must be turned over to his/her replacement.
2
The motorcycles are intended for the exclusive use of the community coordinators for organizing, monitoring and implementing project activities in their respective project
sites. The country coordinators are expected to maintain and use the motorcycle for purposes related to the project only. In case the community coordinator is changed or
replaced, the motorcycle should be turned over to his/her replacement.
Annex 3. Summary of achievements of COGENT’s Poverty Reduction project (January 2002 - De-
cember 2004)
P
Farmers Farmers
Nurseries Farmers awa
No. of Seedlings involved involved
Country and name No. of established Seednuts involved in activ
Name of CBO training planted in in high-
of community members (coconut/ propagated intercropping mat
participants* on farm livestock value
integrated) trials pub
trials products
disse
Bangladesh 325 4980 9 5100 3473 185 115 210
• Bandabila, Bandabila Coconut 100 1660 3 1700 1152 42 43 60
Bagharpara, Community
Jessore
• Chandrapara, Chandrapara 100 1660 3 1700 571 61 39 50
Babugonj, Coconut Community
Barisal
• Jamira, Banchte Shekha 125 1660 3 1700 1750 82 33 100
Phultalam, (BS) Coconut
Khulna Community
Fiji 453 1919 2 1000 1257 32 454 17
187
CHAPTER 3: Germplasm conservation
188
No. of Seedlings involved involved
Country and name No. of established Seednuts involved in activ
Name of CBO training planted in in high-
of community members (coconut/ propagated intercropping mat
participants* on farm livestock value
integrated) trials pub
trials products
disse
• Last Karkar,
Madang Community
Association
Philippines 740 1609 5/2 27 674 22 728 334 473 378
• Malapad, Real, Malapad Integrated 145 583 2/0 6589 1610 101 290 123
Quezon Livelihood
Cooperative
• Caliling, Bahay Patol ARB 129 380 1/1 1535 2446 125 71 49
Cauayan, (Agrarian Reform
Negros Beneficiaries)
Occidental Multipurpose
Cooperative
• Linabu, Linabu Coconut 109 386 1/1 16 000 18 672 45 53 125
Balingasag, Planters Association
Misamis Oriental
• Old Poblacion, Fleischer Estate 357 260 1/0 3550 - 63 59 81
Maitum, Integrated Marketing
Saranggani Cooperative
Sri Lanka 780 1287 0/6 9900 8041 197 328 168
• Hung Phong & Hung Phong/Phong 103 730 0/3 5000 2000 102 319 88
Phong Nam, Nam Coconut 100 513 0/2 500 400 56 238 175
Giong Trom, Community
Ben Tre
• Xuan Dong, Tien Xuan Dong Coconut 100 321 0 410 72 24
Giang Community
• Tam Quan Nam, Tam Quan Nam 150 1397 0/1 1000 500 37 163 165
Binh Dinh Coconut Community
189
CHAPTER 3: Germplasm conservation
COCONUT GENETIC RESOURCES
Institute – Regional Office for Asia, the Pacific and Oceania (IPGRI-APO), Serdang,
Selangor, Malaysia
Introduction
In 1992, at the request of the Consultative Group on International
Agricultural Research, the International Coconut Genetic Resources
Network (COGENT) was launched by the International Plant Genetic
Resources Institute (IPGRI). Starting with 15 countries, COGENT rapidly
developed into an active global Network currently involving 38 coconut
producing countries (Table 1). The establishment of COGENT paved the
way for the global and regional coordination of coconut conservation
efforts.. However, with the increasing threat of genetic erosion and the
increasing poverty in coconut growing communities, there is a need to
further support these initial initiatives of coconut growing countries to
upgrade the collections and to enhance and accelerate the documentation,
evaluation, conservation and use of coconut genetic resources.
Over the past three years, COGENT has conducted several consultations
on the conservation and use of coconut diversity to assist coconut growing
member countries to develop a progressive conservation strategy. Such a
strategy aims to optimize the conservation of as much representative
diversity as possible in the most cost-effective manner for the short,
medium and long term. These consultations led to a draft Global Coconut
Conservation Strategy. In November 2004, the Global Crop Diversity
Trust supported a meeting with of the major coconut producing countries
to review and update the strategy and identify priority conservation
activities.
190
CHAPTER 3: Germplasm conservation
191
COCONUT GENETIC RESOURCES
192
CHAPTER 3: Germplasm conservation
193
COCONUT GENETIC RESOURCES
194
CHAPTER 3: Germplasm conservation
the basic needs of field genebanks such as safety and security, accessibility,
environment etc. have been considered. Among several items that were
considered, two principles were highlighted:
1. First, the importance of having a balance between elite lines and
accessions that represent a broad range of genetic diversity from
the region as a whole was recognized from the beginning.
2. Second, it was agreed that the nationally important accessions
that cannot be accommodated in the regional genebanks, i.e. those
which are only important to one or few countries, would be main-
tained in the national collections of strong national programmes.
Thus, from the beginning it was apparent that national collections and
the ICG would complement each other to accommodate as much coconut
genetic diversity as possible.
Despite its meagre resources, the ICGs have made some significant
achievements. Table 3 shows the date of signing of the hosting agreements
and the status of conserved germplasm in each of the host countries.
There is a need to accelerate the full establishment and upgrading of
the ICGs to make them more useful to protect germplasm from genetic
erosion and to promote wider use of coconut diversity in coconut
producing countries. This will require increasing the number of conserved
material up to a maximum of 200 accessions in each ICG host country,
upgrading and expansion of current embryo culture laboratories,
germplasm importation from ICG regional member countries, growing
embryos in vitro, transplanting resulting seedlings and maintenance in
the FGBs. There is also the need to establish the ICG for LAC region in
Brazil and to establish the field genebank expansion area for the ICG-
SEEA in Indonesia.
* Includes additional accessions entered into the ICG after the signing of the MOA
195
COCONUT GENETIC RESOURCES
196
CHAPTER 3: Germplasm conservation
197
COCONUT GENETIC RESOURCES
198
CHAPTER 3: Germplasm conservation
199
COCONUT GENETIC RESOURCES
200
CHAPTER 3: Germplasm conservation
201
COCONUT GENETIC RESOURCES
will popularize these genetic resources and promote their further study
and possible use.
202
CHAPTER 3: Germplasm conservation
203
COCONUT GENETIC RESOURCES
respectively
Research and training to increase recovery rates from embryo
culture by improving acclimatization techniques at the in vitro
and in vivo stages
Research and training to further refine the cryopreservation tech-
niques using a range of varieties for long tem conservation of
coconut
Research and training to increase the efficiency of rapid regen-
eration of conserved materials through somatic embryogenesis
Research and training to evaluate the genetic fidelity of
cryopreserved materials through molecular marker techniques
Research and training to conduct molecular marker based char-
acterization and genetic diversity analysis of conserved germplasm
in national and international coconut genebanks to eliminate
unnecessary duplicates and in farmers’ fields and to identify ac-
cessions to be conserved the national and international coconut
genebanks.
204
CHAPTER 3: Germplasm conservation
205
COCONUT GENETIC RESOURCES
206
CHAPTER 4: Characterizing diversity
Chapter 4
Characterizing diversity
207
COCONUT GENETIC RESOURCES
208
CHAPTER 4: Characterizing diversity
Introduction
Coconut is cultivated all around the intertropical belt, mainly in coastal
areas. Its large genetic diversity has long been recognised. Attempts to
account for this diversity have resulted in various classification systems
like those proposed by Miquel in 1855, Narayana and John in 1949 or by
Lyanage in 1958 (see the discussion of these systems in Child 1974).
Despite the efforts of these authors, it was not always easy to obtain a
completely consistent system, because some of the traits used in these
classifications represented variation between populations, while others
were polymorph within a given population. Describing the morphological
and agricultural aspects of coconut genetic variation appears to be a
complex task and requires the observation of a fairly large number of
quantitative traits. It is necessary to take into account intra-, as well as,
inter-population variation. It remains that some features of genetic
variation have a great practical and theoretical significance.
A consideration of growth habit - precocity and flowering biology
(Rognon 1976) - leads us to the usual distinction between the
predominantly cross-pollinating Tall and the usually self-pollinated
Dwarfs. Such a distinction is obviously of great significance in field
management and for seed production. For the sake of completeness, two
other categories should be added. The semi-Talls, which are self-
pollinating like Dwarfs, but grow faster and have a bole, like the Talls;
the Compact coconut which is represented by a single cultivar - the Niu
Leka. In spite of its short stature, it has all the characteristics of a Tall
and is cross-pollinated.
Whitehead (1966) proposed protocols for the study of fruit
composition. Harries (1978; 1991) refined them and proposed a theory
of coconut evolution. According to him, coconuts growing in the wild
need to present some adaptive traits including the capacity to float on
sea to allow natural dissemination and to grow in coastal areas. These
adaptive traits result (among other traits) in elongated and triangular
nuts, having a high percentage of husk. Slow germination increases the
possibility of reaching long distances by floatation. In contrast,
209
COCONUT GENETIC RESOURCES
210
CHAPTER 4: Characterizing diversity
Observations
Studying morphological diversity in coconut involves comparing traits
that are measured on different parts of the plant. It is often useful to
compare the results of different studies and this comparison is easier if
standardized techniques are used. For details about which traits to
measure and how to measure them, the reader can consult the
standardized research techniques in coconut breeding (STANTECH)
manual (Santos et al. 1996). In this paper, only the summary of the
principles of such measurements is presented.
As stated above, morphometric observations can be performed in two
very different contexts: in situ (generally in a farmer’s field) and ex situ
(i.e. in a research station). Obviously, there are observations that can be
done in the second case and not in the first case. An overview of the
possible observations is given in Table 1.
211
COCONUT GENETIC RESOURCES
Inflorescence Stalk, central axis and spikelet Same (at approx. 8 years)
morphology measurements, length of branches
Fruit component Weight of components and endosperm Same (measured 2-3 years after
analysis (FCA) thickness production starts)
Fruit appearance Record shape of fruit, measurement of Same, (measured 3 years after
whole fruit, and nut length and diameter production starts)
212
CHAPTER 4: Characterizing diversity
ning to ripen (when colour of the fruit changes from immature col-
our to brown). At this stage, part of the epidermis is turning brown-
ish, due to drying. Other researchers prefer storing fruits in a shaded
area (and – in rainy season – under a shelter) for a period varying
from 15 days to 1 month (Meunier et al. 1977). This method is prefer-
able if the main purpose of the FCA is to estimate the copra contents
while the former is the only choice for in situ analyses. It is also prob-
ably better suited when one wishes to evaluate the liquid endosperm
contents. In any case, the method adopted should be mentioned in
the protocol.
Some of the measurements are made repeatedly, like fruit and bunch
returns but it is not necessary to include all observations in the statistical
analysis. Instead, the average of the observations from a set of samples
(for fruit and bunch return) or the evolution during the period of
observation (for vegetative measurements before flowering) may be
considered. Introducing too many variables that are strongly correlated
in multivariate analysis is not likely to improve the precision of
calculations.
Determining a sample size always involves a compromise between
the expected quality of characterization and feasibility. The larger the
sample, the better are the results. Experience has shown that about 30
palms are a good compromise between accuracy and cost of measurement.
For multivariate analyses, it is important to record all observations on an
individual palm basis. A single missing observation will generally result
in omitting all observations on the corresponding sample palm.
Statistical methods
There are some commonly used methods for presenting results of
morphometric studies. Discussion of these methods does not go into
mathematical details because these analyses are generally done using
specialized software. More details on statistical methods adapted to
genetic diversity analyses may be found in Perrier et al. (1999).
213
COCONUT GENETIC RESOURCES
214
CHAPTER 4: Characterizing diversity
the measurement unit, (thus, the largest the corresponding value), the
largest is the influence of a trait on the result of the PCA. It is customary
to standardize observation by dividing deviations from the mean value
by the standard deviation of the corresponding trait, prior to performing
the PCA itself.
Interpreting the results of a PCA involves the examination of the
resulting plot - treatments that are represented by distant points differ
from each other. The reverse, however, is not necessarily true, as a PCA
plot is a projection of a high dimensional geometric object (i.e. the
representative points of all individuals or treatments) on only two
dimensions, treatments that have about the same values for the first two
components may differ for other components. Thus, it is often useful to
examine representations involving the third or the fourth component,
which may reveal important variation factors. Finally, by inspecting the
correlations between observed variables and each principal component,
it is possible to know which trait(s) contribute(s) the most to variation.
PCA and related analyses involve matrix calculations and may be
performed on computers using various software packages. For example,
the PRINCOMP procedure of SAS® software performs principal
component analysis; the CANDISC procedure performs canonical
discriminant analysis (DA) and also computes Mahalanobis distances.
A (canonical) DA is very similar to a PCA except that principal
components are chosen based on the within treatment variance-
covariance matrix, rather than on the overall variance-covariance matrix.
The result is that in the scatter plots, distances between treatments (rather
than distances between individuals) are maximized.
Mahalanobis distance
Methods related to PCA are very useful to visualize the most prominent
differences between accessions and to relate them with observed traits
that explain the major part of these differences. This is possible only by
discarding part of the useful information. If the main aim is to assess
how different accessions are, regardless of which traits contribute most
to this difference, the full information may be exploited by calculating
genetic distances. One of the most popular distance index used in
studying morphometric traits is the Mahalanobis distance. It is related to
the classical Euclidean distance. The Euclidean distance between
treatments i and j is
Dij = ∑ (x
k
ik − x jk ) 2
where xik and xjk are the respective values of trait number k in treatments
i and j. The Mahalanobis distance is actually a Euclidean distance,
215
COCONUT GENETIC RESOURCES
Qualitative observations
Most observations considered so far are quantitative. However, some of
them are qualitative (colour, shape of fruit, etc). Is it possible to introduce
them into multivariate analyses? One solution is to create a quantitative
variable for each possible value (or modality) of the trait. For example, if
in a survey, palms with green, brown and red fruits were observed, three
variables will be attributed to these colours. Palms with fruits of a given
colour will be attributed value 1 for the corresponding colour and 0 for
the two others. In this manner, the average value of each colour variable
in a population will be the proportion of palms having the corresponding
colour. Such a solution is applicable for producing PCA plots involving
both quantitative and qualitative variables. It must be noted, however,
that the statistical tests based on Mahalanobis distances assume normality,
which is clearly not true in this case.
At any rate, it is interesting to mention that in rare instances, the
colour of inflorescence, nut size and shape and other qualitative traits
may serve as distinct genetic markers like the pink/purple female flowers
and round small nuts of the Pilipog Green Dwarf, the rough and scarified
216
CHAPTER 4: Characterizing diversity
exocarp of the Agta Tall and the thick (5-7 mm) shell of the Tutupaen
Tall from the Philippines.
Diversity indexes
Populations (varieties, cultivars) do not differ only by their mean values
but also by their diversities. In the case of a single quantitative variable,
standard deviation (or coefficient of variation) is an obvious indicator. In
the case of qualitative variable, one of those two diversity indexes may
be used:
1
Simpson index: D=
∑ pi2
i
Shannon-Weaver index: H = −∑ pi . ln pi
i
where pi is the observed frequency of the ith modality of the trait. The
Shannon-Weaver index varies between zero (population is uniform for
the trait) and the logarithm of n, the number of possible values of the
trait (diversity is maximal and all possible values are equally represented).
Simpson Index varies between 1 and n in the same conditions.
Application
217
COCONUT GENETIC RESOURCES
218
CHAPTER 4: Characterizing diversity
219
COCONUT GENETIC RESOURCES
Table 2. Fruit weight and its components in three Dwarf cultivars in two
environments
Solid Liquid
Cultivar Environment Fruit Husk Shell
endosperm endosperm
MBD Vanuatu (V) 1376 285 160 681 250
Côte d’Ivoire (C) 739 240 72 392 35
C/V% 53.7% 84.3% 44.8% 57.5% 14.1%
The C/V% is the ratio of the values observed in Côte d’Ivoire over the values observed in Vanuatu.
220
CHAPTER 4: Characterizing diversity
the weight of the different components, but also the relative composition
of the fruit. In Côte d’Ivoire, the MBD differs from the others through a
high husk to fruit percentage. In Vanuatu, this trait has very similar values
in the three cultivars.
Conclusion
Examples provided in this paper and in the preceding article on
biochemical and molecular markers illustrate the many ways one can
assess coconut genetic diversity. Molecular markers have two great
advantages: their expression is independent from environmental effects
and their number is virtually unlimited. Nevertheless, they cannot replace
the morphometric approach for two reasons. This approach is
fundamental to understand the agricultural value of coconut cultivars.
Such an understanding is important from an economic point of view as
well as for efficient conservation of genetic diversity. Coconut is essentially
a cultivated plant and a large part of its diversity is due to continued
selection by farmers for specific uses. The other reason is that they are
not affected in the same manner by evolutionary forces, and thus, they
give information that molecular markers could not provide alone.
Even so, there are many common aspects in the results of molecular
and morphometric studies. The studies made in Mexico showed very
similar results whichever type of trait is used, e.g. leaf traits, fruit
components, using molecular markers or isozymes (Zizumbo Villarreal
et al. 2002). This is due to the fact that populations on the Atlantic and
Pacific coasts have very different origins. Even on the Pacific Coast, a
certain differentiation exists because coconut introductions occurred from
three different regions: Philippines, Panama and Solomon Islands
(Zizumbo Villarreal 1996). However, classification varies somewhat
between studies because these three origins are within the Pacific group
and that there have probably been crosses between coconuts from different
sources.
It is not surprising that different markers often lead to similar
conclusions. Correlations between the variations of different traits are
expected simply as an effect of random variation between populations
that have evolved independently. Even if the genes corresponding to the
concerned traits are neutral, these populations accumulate different alleles
at each locus due to random sampling of their genes at each generation.
Considering the genes that were subjected to differential selection in the
environments where they grow, these correlations may be reinforced.
Thus, the general rule is that a large portion of the information which
can be obtained from genetic markers is independent of the nature of the
markers (Lebrun et al. 1999b; Teulat et al. 2000).
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COCONUT GENETIC RESOURCES
References
Ashburner, GR, WK Thompson, GM Halloran and MA Foale. 1997. Fruit
component analysis of South Pacific coconut palm populations. Ge-
netic resources and crop Evolution 44: 327-335
CCRI. 1990. Fourth Annual report of the PNG Cocoa and Coconut Re-
search Institute 1989-1990. Tavilo Research Centre. 337p.
Child, R. 1974. Coconuts. Longman, London. 335p.
Harries, HC. 1978. The evolution, dissemination and classification of Cocos
nucifera L. The botanical review 44:266-319.
Harries, HC. 1981. Practical identification of coconut varieties. Oleagineux
36:63-72.
Harries, HC. 1991. Wild, domestic and cultivated coconuts. Pp. 137-146.
In: AH Green (ed). Coconut production: Present status and priorities
for research. Technical Paper N° 136 World Bank, Washington DC,
USA.
Harries, HC. 1995. Coconut. Cocos nucifera L. (Palmae). Pp. 389-395. In:
J Smartt and NW Simmonds (eds). Evolution of crop plants. Longman
Scientific & Technical, New York.
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CHAPTER 4: Characterizing diversity
223
COCONUT GENETIC RESOURCES
224
CHAPTER 4: Characterizing diversity
Introduction
The various coconut palm collections worldwide are veritable genepools
from which geneticists can tap to create or improve existing varieties.
However, if a collection is to be used, it needs to be correctly labelled and
cultivars in collections need to be precisely described, in terms of their
morphological and genetic traits. As the latter are independent of the
environment, they amount to a reliable cultivar identity card. Once
precise labelling has been completed, the collection can be reduced by
discarding duplicates and by limiting the number of representatives in
the case of cultivars with low polymorphism. Such a reduction in numbers
leads to considerable savings in conservation costs. Coconut palm
collections cover large areas of land and thereby entail substantial
management, conservation and renewal costs. Once cultivars have been
correctly identified, it becomes possible to compare them on a worldwide
scale. In this way, it can be seen that specific types such as the Malayan
Yellow Dwarf designation may conceal different cultivars or off-types.
In a disease control context, Lethal Yellowing among others, it is
paramount to identify with certainty those cultivars that display
tolerance, or even resistance. It is just as important to ensure that any
commercially produced hybrid corresponds to what it was claimed to
be. This implies that the identity of the parents should be given special
attention.
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COCONUT GENETIC RESOURCES
Biochemical markers
Biochemical markers, such as isozymes (Benoit and Ghesquière 1984;
Cardeña et al. 1998) or polyphenols (Jay et al. 1988), were first used at
the beginning of the 1980s to describe the diversity of coconut collections.
Unlike with morphological traits, biochemical markers do not require
measuring different characters from different organs in a full-sized palm.
It is enough to take an organ sample (leaflet, root, etc.) to reveal the
biochemical identity of the palm.
Isozymes
Isozymes, which are different forms of the same enzyme, are proteins
produced by RNA translation. They are therefore genetic markers, but
given their low polymorphism in coconut, isozymes proved to provide
very little information for diversity studies. Nonetheless, isozymes were
used by Fernando and Gajanayake (1997) on six cultivars from Sri Lanka.
Of the six enzyme systems tested on leaf extracts, only two monomeric
esterase loci and one dimeric peroxidase locus proved to be polymorphic,
with 2, 3 and 2 alleles, respectively. These results tally with those found
by Hartana et al. (1993), who tested six systems, three of which were
polymorphic. No genetic determinism of the bands was suggested. The
most important study was carried out with isozymes by Benoit and
Ghesquière (1984), who screened 31 enzyme systems, 12 of which
displayed little or no activity, 10 were non-polymorphic and 9 were legible
and polymorphic. Although the genetic determinism of the nine systems
was not entirely elucidated, only two alleles per locus were found.
Cardeña et al. (1998) were no luckier, since they discovered two enzyme
systems (peroxidase and endopeptidase) with two alleles each from testing
four cultivars and two hybrids. Nonetheless, isozymes can be used for
one-off studies, such as differentiating between the Rennell Island Tall
(RIT) and the West African Tall (WAT) (Cardeña et al. 1998).
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CHAPTER 4: Characterizing diversity
Polyphenols
Leaf polyphenols are substances involved in plant defence reactions to
aggression. They form a family of molecules of controlled chemical formula
and abundance. The different types of polyphenols can be identified by
HPLC (High Performance Liquid Chromatography). These markers were
used by Jay et al. (1988) to sketch out an initial picture of coconut genetic
diversity. However, later studies revealed that the polyphenol profiles
had low repeatability, probably due to a major environmental effect. It
was therefore difficult or even impossible to compare collections with
each other, or to compare the same collection over several years. At the
beginning of the 1990s, new types of markers came into being, which
were much nearer to the genetic basis than chromosomes were. These
markers, which were directly linked to the genome, offered the advantage
of being independent of the environment. They were molecular markers.
Molecular markers
Different types of molecular markers were used at the outset to describe
the diversity of coconut collections, and more recently to identify cultivars
or individuals. What these markers had in common was to be directly
linked to the genome, hence, in theory, to be independent of the
environment, the age of the plants or their phytosanitary condition. Each
genetic marker corresponded to a DNA sequence located at a precise
spot of the genome (or locus), whose polymorphism between individuals
was shown using different tools, which generally included enzymatic
digestion of DNA, specific or random multiplication of selected sequences
[polymerase chain reaction (PCR) amplification]. This polymorphism
corresponded to variants (or alleles) of the sequence being studied. It
appeared in the form of bands on electrophoresis gel after developing
with a radioactive or non-radioactive stain (e.g. silver nitrate or
fluorochrome). Depending on the case, a single band was associated with
a locus and polymorphism corresponded to the existence or absence of
the band (‘dominant’ markers). In other cases, each allele was associated
with a different band (‘codominant’ markers), making it possible to
differentiate between a homozygous individual and a heterozygous
individual at the locus in question, which was not the case with dominant
markers. Different types of markers were differentiated by the type of
sequences considered, their position in the genome (nuclear or cytoplasmic
genome, encoding regions or not), the detection technique, their specificity
and reliability, and the mutation rate, which determined the evolution
rate and degree of polymorphism observed. Lastly, the cost of analyses
was an important choice factor.
PCR is a technique for the amplification of a DNA segment between
two known sequence regions. Using specific conditions and procedures
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COCONUT GENETIC RESOURCES
Procedure. Plant DNA was digested by a restriction enzyme that cut the
DNA at a particular site. A large number of fragments were obtained in
this way. These fragments were then separated according to their size
by migration in agar gel under the influence of an electric field. After
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CHAPTER 4: Characterizing diversity
Procedure. Stage 1: Plant DNA was digested by two enzymes, one rarely
cutting (recognition site of 6 bases, e.g. EcoRI), the other cutting more
frequently (recognition site of 4 bases, e.g. MseI).
Stage 2: Double stranded adaptors were ligated to the ends of the DNA
fragments to serve as templates for amplification. Thus, the sequence of
229
COCONUT GENETIC RESOURCES
230
CHAPTER 4: Characterizing diversity
Procedure. SNP markers are frequent and well distributed in the genome.
Their frequency varies depending on the species and on the regions of
the genome: from 1 every 3 kb in man, this figure can fall to 131 pb in the
case of an EST of barley cytochrome P 450 (Bundock et al. 2003) or 54 pb
in the case of an EST encoding 6-phosphogluconate dehydrogenase from
sugarcane (Grivet et al. 2001). Through their variable positions in the
genome (coding or non-coding zones), they offer very strong potential
for markers which are useful for labelling the genome, or for studying
gene regulation.
They are detected in several ways:
• By sequencing (Bundock et al. 2003) (microsequencing or primer
elongation);
• By analyzing the polymorphism of single stranded DNA con-
formation;
• By denaturing gradient gel electrophoresis;
• By mass spectrometry; and
• By DNA microchip hybridization (Schmalzing et al. 2000).
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COCONUT GENETIC RESOURCES
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CHAPTER 4: Characterizing diversity
The 14 primer pairs in the kit (Table 1) have been used to study
diversity on 571 individuals, spread over 136 cultivars. That figure is
continuing to increase, since new populations are being characterized
each month using this kit. The results are entered in the Coconut Genetic
Resources Database (CGRD) and are accessible to the members of the
COGENT network.
CnCir (TG)11 (AG)12 GGTCTCCTCTCCCTCCTTATCTA 191- 193 193 205 205 AJ458319
F2 CGACGACCCAAAACTGAACAC 215
CnCir (GT)9 (GA)9 TA AATATCTCCAAAAATCATCGAAAG 186- 204 208 194 194 AJ458320
G11 (GA)4 TCATCCCACACCCTCCTCT 212
CnCir (TC)8 X4 (CA)5 TTAGATCTCCTCCCAAAG 218- 230 230 230 230 AJ458321
H4’ (CGCA)5 ATCGAAAGAACAGTCACG 236
CnCir (CT)16 (CA)13 GAGATGGCATAACACCTA 127- 133 133 139 139 AJ458322
H7 TGCTGAAGCAAAAGAGTA 149
*T1 = standard 1 = WAT 4
**T2 = standard 2 = MYD
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COCONUT GENETIC RESOURCES
COGENT with funding from DFID to use the skills learned to characterize
their local conserved varieties with at least one of seven varieties with
known tolerance/ resistance to lethal yellowing disease as control. This
research is currently ongoing.
Geneclass2 software
The kit is currently accompanied by Geneclass2 software developed with
Institut National de la Recherche Agronomique (INRA). The need for
this software comes from the cross-fertilizing nature of Tall coconuts.
Unlike clones or self-fertilizing varieties, a Tall cultivar comprises a set of
genotypes, each of which is different. It can only be identified with
molecular markers through the frequencies of the different alleles at the
loci tested. In addition, the number of individuals observed is always
limited, meaning that these frequencies are only known with a degree of
uncertainty. Identifying the population of origin of one or more
individuals therefore means resorting to probability calculations.
The method adopted is a Bayesian method (Baudouin and Lebrun
2001). It requires establishing a set of samples representative of the main
known cultivars, which are then compared to ‘candidate’ samples to be
identified. Geneclass2 software can then assign a probability to each
proposal of the type ‘the candidate comes from cultivar x’. This probability
is a ratio of the ‘score’ of cultivar x to the sum of the scores of all the
reference populations. The score is the probability of obtaining the
candidate, given the reference sample. It is calculated taking into account
the uncertainty of allelic frequencies.
This probability is calculated by considering the hypothesis that the
candidate actually belongs to one of the reference cultivars, which is not
necessarily true. Another test therefore has to be carried out and the
Geneclass2 ‘exclusion’ method makes it possible to calculate the
probability that the candidate belongs to a reference cultivar. For this
calculation, it is necessary to simulate a random sample of the genotypes
of that population. The probability of belonging to the cultivar amounts
to the percentage of simulated genotypes that obtain a lower score than
the candidate.
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CHAPTER 4: Characterizing diversity
In 17% of cases, the cultivar identified had another name but came from
a neighbouring region. It was highly likely that some biologically identical
cultivars were given different names, either because they were described
by different people, or because the corresponding populations had
different morphometric characteristics due to environmental or age
differences. It was therefore reasonable to assume that a proportion of
the 17% actually corresponded to correctly classified cultivars.
In 10% of cases, the samples were attributed to cultivars in the same
group, but from another region. In a small number of cases, assignment
was ambiguous. This may have involved cultivars for which genetic
differences were too slight to be picked up with the number of individuals
used. The possibility of germplasm exchange over long distances could
not be ruled out either.
The method gave different results depending on the groups of
populations. For instance, each Dwarf cultivar was correctly identified.
These cultivars are self-fertilizing and extremely homogeneous, making
it easier to distinguish between them. On the other hand, most of the
cultivars that were imprecisely identified came from Melanesia. In fact,
more populations were sampled from this region than from any other.
As a result, some populations were very similar to each other and thus
difficult to distinguish with only five individuals per population.
1
Agrees with the table: members of the same populations belong to the same cultivar
Same population + same cultivar = 64% + 8% = 72%
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COCONUT GENETIC RESOURCES
When it was used to distinguish between the main coconut cultivars, the
Bayesian method used in Geneclass2 proved to be efficient in identifying
coconut cultivars, even with a small sample size. This exercise became
more difficult only when closely related populations were involved. In
fact, the efficiency of the method depended on three factors: the sample
size (both in the reference samples and in the candidates), the genetic
diversity of the studied populations and the genetic divergence between
populations. For this reason, larger samples are needed to study fine
genetic structure on a regional scale than on a global scale. One of the
important characteristics of the method is that with time, more samples
can be included in the reference set, making it possible to improve its
discriminating power.
Results
Studies using samples representing the worldwide coconut diversity were
carried out using RFLP (Lebrun et al. 1998; Lebrun et al. 1999),
microsatellite (Baudouin and Lebrun 2002), or AFLP (Teulat et al. 2000)
markers. All these studies detected two major cultivar groups. The first
was the Pacific group that was both the most polymorphic and the
geographically most extensive. It spreads from Southeast Asia to the east
coast of Latin America. It includes four sub-groups with blurred
boundaries: Southeast Asia, Melanesia, Micronesia and Polynesia. The
coconut palms from Panama and Peru form a fifth sub-group, related to
the precedents, but clearly distinct. All Dwarfs, irrespective of their
geographical origin, form a genetically uniform group that belongs to
the Pacific group, sub-group Southeast Asia. The Niu Leka Dwarf is a
notable exception as this cross-fertilizing Dwarf originated from the South
Pacific.
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CHAPTER 4: Characterizing diversity
The second was the Indo-Atlantic group that originated from the
Indian subcontinent, from where it was subsequently transported to West
Africa and the Atlantic coast of Latin America. East Africa is also
populated with coconut palms of the Indo-Atlantic type, though these
received an input from cultivars of Southeast Asian origin, resulting from
Austronesian migrations to Madagascar.
For the most part, these results are confirmed by other studies; the
distinction between the Indo-Atlantic and Pacific groups has been
observed with other markers such as ISTR (Rohde et al. 1995; Fernando
et al. 1997) or in a partial study carried out with RAPD markers (Wadt et
al. 1999). The same applies for the AFLP gathered by Perera et al. (1998)
where the main two groups were formed by local cultivars and Dwarfs
of the Pacific group, along with the “auranthiaca” (King coconut and
Rathran Thembili) genotypes, which actually came from ancient
hybridization between the Dwarfs and local genotypes. In the study by
Rivera et al. (1999), microsatellites showed that Dwarfs formed a uniform
group within the local Talls and clearly stood out from the Pacific
coconuts (RIT or Rennell Island Tall and PYT or Polynesian Tall). Minor
differences exist with the RAPD study by Ashburner et al. (1997), which
focused on the South Pacific and proposed two groups, North and South.
Lastly, the classification of Florida populations by Meerow et al. (2003)
was the only one to group the Jamaica Tall with the Panama Tall. This
casts doubt on the legitimacy of the planting material used. Finally, these
two groups are compatible with the results of phenotypic and polyphenol
observations (Lebrun et al. 1999).
The contribution of microsatellites to a better understanding of coconut
genetic diversity can be illustrated by comparing the resulting classification
with the theory proposed by Harries (1978). According to him, all coconut
cultivars were derived from two types: 1. the ‘Niu Vai’ (also called
‘domesticated’) type, which has rounded nuts with high water content,
early germination and an erect stipe and 2. the ‘Niu Kafa’ (considered as
‘wild’ type), which have more or less triangular nuts, thick husk, a slow
rate of germination and a more slender and curved stem. Many currently
available coconut cultivars are intermediate between those two types.
Following this typology, almost all the cultivars that tend towards the
Niu Kafa type belong to the Indo-Atlantic group and almost all those that
were considered by Harries as Niu Vai or introgressed belong to the Pacific
group.
While concordance is the general rule, differences between these
classifications are not difficult to explain: while the reasoning underlying
the morphological classification mainly involves natural and artificial
selection forces, the molecular classification focuses on the genetic
relationships between cultivars and on their regions of origin. Due to
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COCONUT GENETIC RESOURCES
cross pollination, Tall coconut cultivars that have grown in the same
region for some time are likely to have a more or less similar genetic
structure. As a result, a clear geographic pattern of variation is expected
and, indeed, observed with Tall coconuts. The situation is different with
Dwarfs, because they have a strong tendency to self-pollinate and tend
to conserve their genetic structure irrespective of the place where they
are planted. This structure therefore reflects the region where it appeared
(i.e. Southeast Asia), rather than the one in which it is found, even if it
has been there for a long time.
An example of discrepancy between the two classifications is the
Kappadam from India. This is clearly of the Niu Vai type according to
Harries (1978). However, microsatellites indicate that it is an Indo-Atlantic
cultivar, as could be inferred from its place of origin. However, the
presence of a few microsatellite markers from Southeast Asia makes it
possible to understand the origin of this cultivar. Its ancestors were
probably imported from Southeast Asia and strict selection was necessary
to enable it to conserve its distinct Niu Vai traits over generations, while
a large proportion of its genes have been replaced by those of the local
populations, which are of the Niu Kafa type.
The main arguments of the theory proposed by Harries remain valid,
though they do need to be moderated and complemented using molecular
marker information. Considering the high diversity found in this region,
the hypothesis of a centre of diversification located in the vast archipelago
situated between Southeast Asia and PNG (Harries 2002) seems to be
confirmed. Before its domestication, the coconut palm probably had
characteristics similar to those of the Niu Kafa type, which benefited
from a definite advantage for its dissemination over large distances by
ocean currents. However, this selective factor was probably less important
in the centre of diversification, where the distances to be covered were
shorter than in the periphery. It is likely that this facilitated the appearance
of the Niu Vai type, under the effect of domestication in Southeast Asia
and/or Melanesia. In other respects, the Niu Kafa type predominates on
the Indian subcontinent even after a long period of cultivation. Either
Indian farmers had different breeding objectives from those in Southeast
Asia (notably fibre production), or, despite their efforts, the populations
available to them were too homogeneous to develop significantly towards
the Niu Vai type. The counter-example given by the Kappadam suggests
that the second hypothesis explains at least partly the Indian coconut
palm characteristics. Moreover, this reduced diversity in the Indian sub-
continent is confirmed by microsatellite markers.
There are cultivars with large and clearly Niu Kafa fruits in the South
Pacific. The absence of obvious similarities between their microsatellite
238
CHAPTER 4: Characterizing diversity
profiles and those found in the Indian subcontinent suggest that they
evolved independently. During their expansion from Southeast Asia, the
Polynesian ancestors might have ‘rediscovered’ the Niu Kafa type, which
was very different from the Niu Vai types with which they had been
familiar. This type was apparently maintained (and maybe accentuated
by selection) due to its advantages for the production of fibres, which
were valuable for navigation.
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COCONUT GENETIC RESOURCES
1,5
PC2 (7.7%)
0,5
CI Aguadulce
CI Monagre
0
-1,5 -1 -0,5 0 0,5 1 1,5
Jamaica Bowden
PC1 (11.5%) Nicaragua Aguadulce
-0,5
Costa Rica
Peru
-1
-1,5
PC2 (7.7%)
1.5
CI Aguadulce
0.5
CI Monagre
-1.5 -1 -0.5
0
0 0.5 1 1.5
Jamaica Bowden
PC1 (11.5%)
Nicaragua Aguadulce
-0.5
Costa Rica
-1
Peru
-1 .5
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CHAPTER 4: Characterizing diversity
Most modern authors (Child 1974; Harries 2002) agree that the coconut
palm does not originate from America, even though it has been present
on that continent for a long time. This raises three questions: where did
the founding individuals come from? How did they get there? When did
they get there?
These three points were examined using Shannon’s information
theory. The resemblance between the allelic structure of the Panama Tall
and that of coconut palms from different regions of the Pacific was
evaluated by calculating a parameter called “ambiguity” (the less a
marker provides information likely to distinguish between two origins,
the greater is the ambiguity). It turned out that, despite its particular
genetic structure, the Panama Tall most resembles the coconut palms of
Southeast Asia, followed by that of Melanesia, Polynesia and Micronesia.
There are several arguments in favour of a Southeast Asian origin.
Firstly, several plants seem to have followed the same route, including
the plantain banana and bamboo. Secondly, archaeological remains
dating back 2500 years, and revealing several Southeast Asian traits,
have been found in Ecuador and Bahía de Caraquez (Estrada and Meggers
1961). Unlike in Panama and Peru, there is no direct evidence of a pre-
Columbian existence of coconut palms in Ecuador, but if the coconut
palm effectively reached America in Ecuador, it explains the existence of
the same cultivar in Peru and Panama.
The Southeast Asian origin of “Bahía Culture” still arouses bitter
discussions, but it nonetheless remains the case that the expansion of
Austronesian peoples to Polynesia on the one hand and to Madagascar
on the other hand, clearly demonstrates that those people in the remote
past had the ability to undertake long sea voyages. This provides an answer
to the third question raised above; the distance covered (almost 18000
km) is well beyond the possibilities of dissemination by floating on ocean
currents.
Conclusion
With the microsatellite kit, molecular markers have become a powerful
tool to explore genetic diversity in coconut. Although molecular markers
have (in principle) no direct connections with phenotypic variation, they
contribute to a better understanding of its distribution, because the
distributions of characters were shaped by the evolutionary history of
the populations. By combining historical records, morphological and
microsatellite variation, it is possible to retrace important features of the
history of the crop since its domestication. This makes it possible to
understand the relationships among the cultivars found around the world.
Above all, it is useful for an efficient use of genetic resources.
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242
CHAPTER 4: Characterizing diversity
Acknowledgement
We are grateful to Dr JHA Barker for her helpful discussions about coconut
microsatellite kit development, and K. Devakumar for his considerable
assistance in SSR testing. IPGRI, COGENT, the CEC and BUROTROP
provided the financial support for the kit development.
References
Ashburner, GR, WK Thompson and GM Halloran. 1997. RAPD analysis
of South Pacific coconut palm populations. Crop Science 37:992-997.
Ashburner, GR, WK Thompson, GM Halloran and MA Foale. 1997. Fruit
component analysis of South Pacific coconut palm populations. Ge-
netic Resources and Crop Evolution 44:327-335.
Baudouin, L. 1999. Genetic improvement of coconut palms. Pp. 45-56.
In: C Oropeza, JL Verdeil, GR Ashburner, R Cardena, JM Santamaria
(eds). Current Advances in Coconut Biotechnology. Kluwer Academic
Publishers, Dordrecht, The Netherlands.
Baudouin, L and P Lebrun. 2001. An operational Bayesian approach for
the identification of sexually reproduced cross-fertilized populations
using molecular markers. Acta Horticulturae 546:81-93.
Baudouin, L and P Lebrun. 2002. The development of a microsatellite kit
for use with coconuts. IPGRI, Rome. 66p.
Benoit, H and M Ghesquière. 1984. Electrophrèse, compte rendu cocotier.
IV. Le déterminisme génétique. CIRAD-IRHO, Montpellier, France.
Bundock, P, J Christopher, P Eggler, G Ablett, R Henry and T Holton.
2003. Single nucleotide polymorphisms in cytochrome P450 genes
from barley. Theoretical and Applied Genetics 106:676-682.
Cardeña, R, C Oropeza and D Zizumbo. 1998. Leaf proteins as markers
useful in the genetic improvement of coconut palms. Euphytica 102:81-
86.
Child, R. 1974. Coconuts. London, Longman. 54p.
Erlich, H. 1989. Principles and applications for DNA amplification.
Stockton Press, New York, USA.
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244
CHAPTER 4: Characterizing diversity
245
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246
CHAPTER 4: Characterizing diversity
A Pacific Group
A1 Southeast Asian Dwarfs
A1a Malayan type
A1b Philippine type
A2 Pacific Dwarfs (and semi-Talls)
A3 Southeast Asian Tall
A3a Continental type
A3b Indonesian type
A3c Philippine type
A4 Melanesia
A4a North New Guinea type
A4b South New Guinea type
A4c Insular PNG type
A4d Markham Valley type
A4e Vanuatu Type
A5 Micronesia
A6 Polynesia
A7 Panama (and Peru)
B Indo-Atlantic group
B1 Introgression absent to very low
B2 Low introgression rate
B3 Moderate to high introgression rate
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COCONUT GENETIC RESOURCES
248
CHAPTER 4: Characterizing diversity
Chapter 5
Germplasm use
249
COCONUT GENETIC RESOURCES
250
CHAPTER 5: Germplasm use
Introduction
Coconut genetic resources have been traditionally collected and conserved
in major coconut producing countries with the objective of using these
to improve the genetic make up of their existing cultivars. Selected
germplasm are generally used as: a) planting material to improve the
coconut productivity in the country or a region; b) test material to
determine the phenotypic and genotypic characters of value and c)
population base for breeding superior hybrids/varieties.
Based on their origin, these germplasm could be categorized into:
traditional varieties or landraces, as exotic varieties introduced into the
country, or as modern varieties or hybrids resulting from a national
breeding effort. Most coconut producing countries have a mixed
population of landraces and introduced hybrids/varieties. There are
continuing efforts to further improve cultivars through mass selection
and hybridization, and to produce synthetic varieties for economic
reasons.
As breeding material, the coconut germplasm are generally grouped
according to their growth habit. In addition, the differences in their
mating behaviour give the breeders flexibility in designing various
breeding schemes to achieve their desired coconut ideotypes. The
STANTECH manual (Santos et. al 1995) described the following major
classification of coconut:
1. Tall palms, sometimes referred to as var. typica (Nar.), are essen-
tially cross-pollinating and therefore considered to be hetero-
zygous. They are slow maturing and flower 6-10 years after plant-
ing, and can grow to a height of 20-30 m. They have an average
economic life of 60-70 years.
2. Dwarf palms, sometimes referred to as var. nana (Griff.), are nor-
mally self-pollinating and therefore considered to be homozygous.
They are believed to be mutants from Tall types with short stat-
ure, 8-10 m when 20 years old. They begin bearing about the
third year sometimes at less than 1 m stem height but have a
short productive life of 30-40 years.
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COCONUT GENETIC RESOURCES
There are also rare ‘intermediate types’ which do not express the
phenotype normally associated with either the Talls or the Dwarfs.
Natural crosses between Tall and Dwarfs occur sporadically in traditional
populations. In some instances, such open-pollinated hybrids may become
fixed as ‘semi-Talls’, which have the same mating behaviour as Dwarfs
but grow faster. In the South Pacific, there is also a Niu Leka Dwarf,
which has all the characteristics of a Tall type coconut, except for its
short stature. These intermediate types have a good potential in
broadening the genetic base of the breeding population but their parental
value has yet to be fully evaluated.
This paper presents the various ways these coconut germplasm are
used in conventional breeding, the general status of the breeding
programmes for coconuts including their limitations and constraints, and
future breeding strategies.
Population base
The coconut (Cocos nucifera L.) is a diploid with 32 chromosomes (2n=32)
and the sole species of the genus Cocos. As such, current breeding work
on this tree crop is limited to the intraspecific level.
The coconut palm is monoecious, i.e. its inflorescence carries both
staminate (male) and pistillate (female) flowers (Frankel and Galun 1977).
Generally, Talls, being protandrous, shed pollen prior to stigma
receptivity. They are generally considered as allogamous. Nevertheless,
selfing is possible because of the variable overlapping between the female
phase of an inflorescence and the male phase of the next inflorescence.
The speed of emission of inflorescences varies according to genotype and
environment, with a great seasonal variation; so do the selfing rate. On
the other hand, the Dwarfs are generally considered homogamous as
stamens and pistils mature simultaneously thus Dwarfs can shed and
receive pollen at the same time resulting in inbreeding. Apart from their
short stem, most of the Dwarfs show a combination of common
characteristics: preference to autogamy, sensitivity to environmental
stresses, small-sized organs, precocity, and rapid emission of inflorescence.
Because of the last three characteristics, the Dwarfs play an important
role in hybridization programmes. However, the genetic determinant of
coconut dwarfism is still unknown.
The bisexual nature of the Talls and the Dwarfs allow manipulation
of pollination to secure the desired level of genetic introgression with the
Talls as source of heterozygous genotypes while the Dwarfs provide the
progenitors of homozygosity.
The genetic structures of coconut are yet to be fully understood, and
the diversity of identified and collected coconut germplasm are yet to be
fully exploited. As of 2003, the Coconut Genetic Resources Database
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CHAPTER 5: Germplasm use
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COCONUT GENETIC RESOURCES
256
CHAPTER 5: Germplasm use
considered a wider cross than the inter-Tall crosses and hence, expectedly
have higher genetic variances and overall population means. However,
Bourdeix (1998) reported that in the long term the T x T can have a
cumulative production equivalent to the yield of D x T as demonstrated
in the comparison between the WAT x RIT improved hybrid and the
PB121 (MYD x WAT) at the 9th year of production cycle. Later, it was
reported that the T x T hybrid even outyielded the PB121. Similarly, Santos
(2001, unpublished) observed that after 15 years, the yield of the
Philippines’ local Talls, such as Tagnanan Tall and San Ramon Tall, could
equal the yield of D x T hybrids and that the superiority of these hybrids
appeared to be only in the first 12 years. Apparently, it would take several
production cycles to fully assess the comparative advantage of the
different conventional breeding schemes for coconut.
The D x D hybridization technique is not very popular among the
coconut breeders. Dwarfs are reputed sensitive to environmental stresses,
such as drought and low fertility soils. Nevertheless, some of the most
profitable coconut plantations in the world are probably those of Green
Dwarfs found in Brazil and Thailand; with high planting density (more
than 200 palms per hectare), high fertilization rate and sufficient
irrigation. The Thailand coconut breeding programme is now mainly
focused on the improvement of the Aromatic Green Dwarf varieties. An
experiment was conducted in Côte d’Ivoire in 1971 to test the three
possible hybrids between MYD, MRD and Brazil Green Dwarf (BGD)
and compare them with MYD as control (Le Saint and Nuce de Lamothe
1987). The hybrid MYD x MRD produced an average of 3.8 tonnes copra
per hectare which was comparable to the production level of a good D x
T hybrid. An important feature of D x D hybrids is their high genetic
homogeneity. As the two Dwarf parents are close to pure line, their
progenies are less likely to be variable in genotype than the D x T and T
x D hybrids.
Some of the best D x T and T x T hybrids were improved using the
individual combining ability tests method and by exploiting the genetic
variability that exists within the populations of Talls. For a description of
this method, it is better to use an example. The hybrid PB121 is a cross
between the MYD and a selected population of WAT. Its good
performance in Côte d’Ivoire has stimulated its further improvement.
Forty-five WAT parent palms were selected based on phenotype and
individually crossed with the same MYD population. The 45 progenies
thus obtained are considered half-sib families. In only one generation of
breeding, it was possible to improve the yield of the earlier PB121 hybrid
from 15 to 25 percent; some of the improved F1 progenies were also proven
to be more tolerant to the phytophthora disease in Côte d’Ivoire (Bourdeix
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COCONUT GENETIC RESOURCES
et al. 1992). This method, initially developed by CIRAD in the 1970s, was
applied mainly in Côte d’Ivoire and Vanuatu on D x T and T x T hybrids
using the West African, Rennell Island, Tahiti and Vanuatu populations
of Talls.
Complex hybrids
In breeding coconut, promising hybrid progenies are identified, evaluated
and selected for specific traits as early as in the F1 generation. This, of
course, limits a complete exploration of possible polygenic recombination
of a cross. Few countries are currently testing multiple crosses to develop
varieties with desirable multiple traits or simply carry on the selection
process to the next steps.
Thailand is testing 3-way cross hybrids (TxT) x T and (DxT) x T. It
will be interesting to compare the level of heterogeneity of these two
kinds of combination. Because of segregation for dwarfness, (DxT) x T
will be probably more variable than (TxT) x T, but this remains to be
studied.
In Côte d’Ivoire, as early as 1976, the MYD was crossed with the
hybrid WAT x RIT. This 3-way hybrid, planted in medium agronomic
conditions, yielded only 77% more than the WAT control. In other better
experiments, the single cross hybrids MYD x WAT and MYD x RIT yielded
97% and 129% more than the WAT control, respectively (Anonymous
1988). Nevertheless, in Côte d’Ivoire, Dwarf varieties are now
systematically crossed with a tester made of selected parent palms from
the hybrid, WAT x RIT. Also in Côte d’Ivoire, from 1986 to 1992, double
or 4-way cross hybrids were also created: (DxT) x (DxT), (DxD) x (TxT)
and (DxT) x (TxT) using selected Tall and Dwarf progenitors. However,
these were not included as a part of the main classical breeding scheme.
They were specially conceived anticipating the possible development of
a cloning technique.
Synthetic varieties
In addition to the hybridization method of improving coconut cultivars,
the Philippines is spearheading the development of synthetic varieties
which are predicted to have wider adaptability and stability in
performance due to the utilization of several selected parents as compared
to single cross hybrids (Santos and Rivera 2002). The parental base of a
synthetic variety is a composite of selected parental lines which combined
well in all combinations through natural crossing. Hence, prospective
parental genotypes are first tested for their combining ability or additive
gene effects before they are entered into the mating pool. Accordingly,
the most critical stage in the development of a synthetic variety is the
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CHAPTER 5: Germplasm use
selection of the parents for the composite. In corn, the expected yield of
the Syn2 increased steadily as inbred lines with higher combining ability
were added, reaching a maximum at 5 or 6 parental lines, after which
the expected yield decreased steadily as more lines were added (Allard
1960). To summarize, finding the optimal number of parental lines
requires a trade off between the selection of best lines, which tends to
reduce this number and reduction of consanguinity, which tends to
increase it. In coconut, the main drawback in developing synthetic
varieties is that the combined genes favouring the desired traits may only
attain equilibrium after several cycles of intermating since inbreeding or
purification of parental lines are generally circumvented.
An important question related to the use of synthetic varieties is that
seednuts released to farmers are obtained from open pollination.
Therefore, the same problem may arise as described in the mass selection
process. Selfing rate varies with the speed of emission of the inflorescences,
depending on genetic and environment factors, and is very sensitive to
seasonal effects. As there is a strong inbreeding depression, the mean
values of the seednuts may vary with seasons. This could be avoided by
removing the ‘unwanted’ inflorescences in the seed gardens at the critical
seasons. This way, the possibility of natural selfing will be eliminated
and the mean value of seednuts will increase and become homogeneous.
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COCONUT GENETIC RESOURCES
and hybrids for environments in which they were grown. Table 1 shows
the types and number of promising and/or recommended single cross
hybrids in major coconut growing countries. The D x T hybrids obviously
dominated the breeding output, followed by the T x T progenies.
Promising T x D and D x D crosses were reported only in India and Fiji,
respectively; although Côte d’Ivoire has already produced exceptionally
high yielding MYD x MRD hybrid as early as 1971.
In terms of breeding for resistance to biotic and abiotic stress, the infusion
of resistant genes is done by intercrossing stress-tolerant germplasm with
adapted germplasm. Some of the known cultivars being used in breeding
for major coconut disease resistance are: Vanuatu Tall for tolerance to
coconut foliar decay, Pacific Tall and Malayan Dwarf for lethal yellowing
disease resistance and Sri Lankan Green Dwarf for Cape St. Paul wilt
tolerance. Rajagopal et al. (Chapter 5) reported that in general, Talls and
hybrids with Tall as mother palm have higher drought tolerance
compared to Dwarfs and hybrids with Dwarf as mother palm. Most
drought tolerant varieties have thick leaflets and thick cuticle. In addition
to anatomical feature, the behaviour of coconut varieties on drought is
influenced by environmental physiological and biochemical factors.
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CHAPTER 5: Germplasm use
Table 2. Coconut productivity in farmers’ field and research stations, and area
planted to hybrids
(Source: P Batugal and J Oliver, 2003)
Yield per Year
(A) Farmers'
(B) Research Area grown to
Fields/National Technology Gap
Country Station/Hybrids Hybrids (% of
Average [100-(A/B x100)]
Prod’n area )
Nuts Copra Nuts Copra
-1 -1
(t ha ) (t ha )
South Asia
Bangladesh 21/palm 69/palm 70 nil
India 6892/ha 23 700/ha 71 14
Sri Lanka 42/palm 63/palm 33 11
Southeast Asia
Indonesia 1.1 3.5 69 5
Malaysia 10 000/ha 23 000/ha 57 n.d.
Philippines 0.78 4-6 84 n.d.
Thailand 1.2-1.5 3.0 55 10
Vietnam 38-40/palm 55-80/palm 42 <0.1
South Pacific
Fiji 0.3-0.5 2.0 80 <5
PNG 0.66 2.8-3.6 80
China 1.27 3.6 65 1.5
Africa
Ghana 20/palm n.d. 3
Tanzania 40/palm 80/palm 50 n.d.
LAC
Jamaica 0.8 3.7 78 n.d.
Mexico 0.65 4.0 84 1
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COCONUT GENETIC RESOURCES
identified some varieties that have traits suitable for the production of
high-value coconut products. Based on the above, breeding programmes
should be designed to develop and provide either varieties or hybrids
that suit specific agroecological conditions and small-scale farmers’ needs.
In the end, each national coconut breeding programme should be able to
propose to farmers a set of well-evaluated varieties including Dwarfs,
Talls, and Hybrids.
References
Anonymous. 1988. Rapport scientifique cocotier. Station Cocotier Marc
Delorme. Institut de Recherches pour les huiles et Oléagineux, Côte
d’Ivoire. 217p.
Allard, RW. 1960. Principles of plant breeding. John Wiley & Sons, Chich-
ester, Brisbane, Toronto. 485p.
Batugal, PA. 1999. The role of international cooperation in the develop-
264
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265
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Introduction
Some characteristics of coconut are significant for understanding the
constraints and the limitations affecting coconut breeding efficiency:
• It is a tree crop; it has a long life cycle and needs to be observed
for several years after sexual maturity, which is reached from 3
to 6 years after field planting. As it is planted at a low density
(typically between 140 to 200 palms/ha), genetic trials require
large areas.
• It exhibits a large phenotypic diversity from Dwarf to Tall with
various intermediate forms. This variability is especially obvious
on fruit characters;
• Although Tall cultivars are mainly cross-pollinating, self pollina-
tion occurs at a rate that is strongly determined by the environ-
ment. Dwarf cultivars are mainly self-pollinated, but not strictly
so and Green and Brown Dwarf types often show a certain per-
centage of cross-pollination;
• It is subject to severe inbreeding depression but may also show
high interpopulation heterosis;
• It has a low multiplication rate: in very good conditions it may
produce 100 descendants per year only; and
• There is no horticultural vegetative propagation method for co-
conut and there is no routine in vitro vegetative propagation tech-
nique.
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COCONUT GENETIC RESOURCES
Synteny
The above approach requires extensive mapping of the species genome
because nothing is assumed about the location of interesting QTLs. Its
efficiency may be improved if some information about the location and
function of QTLs is available, even from another species. This information
may come from a related species, where some QTLs have already been
identified. By establishing a correspondence between the two species’
chromosome maps (using markers that are polymorphic in both species),
it is possible to check in species A for the presence of a QTL that has been
identified in species B. Application of this principle has been
demonstrated for sorghum and sugarcane (Dufour et al. 1997), for rice
and sorghum (Ventelon et al. 2001) and also for a group of species
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COCONUT GENETIC RESOURCES
Genetically-modified organisms
Genetic transformation consists in introducing a gene (from the same
species or from another species) into the genome of an organism. After
its introduction, this gene functions as a part of the recipient plant
genome and may be transmitted sexually. Genetic transformation
involves several steps:
• Setting up a genetic construction (a chimerical sequence of DNA),
generally including the desired gene a promoter to control the
gene expression; and sometimes, a ‘selected’ gene use for identi-
fying and selecting the transformed plants.
• Introducing the construction into the plant cells (several methods
are available).
• Selecting the plants that have included the construction in their
genome and thus express the ‘selected’ gene.
• Checking that the transformed plant behaves as expected.
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CHAPTER 5: Germplasm use
Tall 1 x Tall 2
Mapping population
The use of a well chosen set of Dwarf mother palms as a tester makes it
possible to produce a large number of progenies while simplifying the
mapping task due to its highly homozygous genetic structure. Such a
mapping population is being planted in the Philippines in the framework
of the INCO-LINK2PALM project. Another population is available in
Côte d’Ivoire.
Linkage mapping
The available results in linkage mapping demonstrate the feasibility of
constructing a map with reasonably good coverage of the coconut genome,
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COCONUT GENETIC RESOURCES
thus obtaining 16 linkage groups. Some QTLs for traits related to early
development and production have also been identified. The work that is
underway through the collaboration of several research teams in the
framework of the INCO LINK2PALM project will make it possible to
increase the density of markers and also identify more QTL markers in
coconut.
In the next few years, another generation of mapping population
will be made available for molecular breeding. In these populations, QTLs
related to between-cultivar differences rather than on within-cultivar
variation is being emphasized. It is expected that such QTLs will be much
easier to use in coconut breeding than those located in presently available
mapping populations because they correspond to differences between
cultivars (and possibly, between molecular groups) rather than
differences between individuals of the same cultivar. Their utilization
will not be restricted to the exploitation of a single cross.
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COCONUT GENETIC RESOURCES
Constraints
Coconut breeding suffers mainly from a severely limited amount of
resources, both financial and human. The characteristics of the crop make
breeding both slow and costly. It takes at least 14 years for a generation
and one hectare for testing each hybrid. Very few coconut-producing
countries have the necessary resources for a comprehensive programme
and coconut breeding has often been limited to testing a few F1 hybrids
between populations.
Once good hybrids and varieties are selected, the difficulty is to
reproduce them and to make seednuts available to farmers. In most
producer countries, hybrid seed production has been the main obstacle
in extending the hybrids under cultivation. The lack of an efficient
vegetative propagation method also makes it difficult to take advantage
of breeding progress.
Opportunities
First with the creation of the International Coconut Genetic Resources
Network (COGENT), and now with the establishment of a Global Coconut
Research for Development Programme (PROCORD), there is an
increasing recognition of the coconut as a strategic crop for many tropical
countries. Within this framework, coconut-producing countries as well
as countries interested to assist them can collaborate, working in a
network, for a globally-coordinated coconut breeding programme. Each
country can participate in the activities in which it is most interested,
within its available resources. Using molecular techniques makes the
programme even more attractive. The network may involve laboratories
and research teams from developing and developed countries. It can also
use other possibilities such as synteny with oil palm.
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References
Ashburner, GR, WK Thompson and GM Halloran. 1997. RAPD Analy-
sis of South Pacific coconut palm populations. Crop Science 37:992-
997.
Asnaghi, C, F Paulet, C Kaye, L Grivet, M Deu, JC Glaszmann and A
D’Hont. 2000. Application of synteny across Poaceae to determine
the map. Theoretical and Applied Genetics 101:962-969.
Dekkers, JCM and F Hospital. 2001. The use of molecular genetics in the
improvement of agricultural populations. Nature reviews Genetics
31:22-32.
Dufour, P, M Deu, L Grivet, A D’Hont, F Paulet, A Bouet, C Lanaud, JC
Glaszmann, and P Hamon. 1997. Construction of a composite sor-
ghum map and comparison with sugarcane, a related complex poly-
ploid. Theoretical and Applied Genetics 94:409-418.
Duran, Y,W Rohde, A Kullaya, P Goikoetxea and E Ritter. 1997. Mo-
lecular analysis of East African Tall coconut genotypes by DNA
marker technology. Journal of Genetics and Breeding 51:279-288.
Glaszmann, JC, P Dufour, L Grivet, A D’Hont, M Deu, F Paulet, and P
Hamon. 1997. Comparative genome analysis between several tropi-
cal grasses. Euphytica 96:13-21.
Glaszmann, JC, P Dufour, L Grivet, A D’Hont, M Deu, F Paulet and A
Kleinhofs. 1999. Sequence analysis of a rice BAC covering the
syntenous barley Rpg1 region. Genome 42:1071-1076.
Herran, A, L Estioko, D Becker, MJB Rodriguez, W Rohde and E Ritter.
2000. Linkage mapping and QTL analysis in coconut (Cocos nucifera
L.). Theoretical Applied Genetics 101:292-300.
Karp, A. 1999. The use of polymorphic microsatellites for assessing ge-
netic diversity in coconut. Pp. 121-129. In: JM Santamaria (ed). Cur-
rent plant science and biotechnology in agriculture - Current advances
in coconut biotechnology. Kluwer Academic Publishers, Dordrecht,
The Netherlands.
Kasha, KJ. 1999. Biotechnology and world food supply. Genome 42 (4):
642-645,
Kinney, A. 1996. Development of genetically engineered soybean oils for
food applications. Journal of Foods Lipids 3:273-292.
Lebrun, P, L Baudouin, R Bourdeix, JL Konan, JHA Barker, C Aldam, A
279
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281
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283
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influenced by the soil water status (Kasturi Bai 1993: Naresh Kumar et
al. 2002a). In general, palms suffered more in red sandy loam than in
laterite soil as indicated by the stomatal resistance and leaf water potential.
The soil types and compaction levels influenced the degree of water stress
in seedlings also (Nainanayake and Bandara 1998). Hybrids had higher
stomatal resistance resulting in maintenance of higher water potentials
during stress in laterite soil than in sandy loam (Voleti et al. 1993a).
However, the hybrid COD x WCT was found to be most sensitive to
water stress in sandy loam soil.
100 for five weeks Drying of drooped leaves, falling of tender and immature Severe
nuts; burning trace on nuts due to the high intensity of
radiation.
100 for > 5 weeks Palms show the death symptoms, drying of the spindle leaf. Disastrous
284
CHAPTER 5: Germplasm use
lowest in the hybrids WCT x PHOT and WCT x GBGD and the highest
in WCT x MOD (Ramadasan et al. 1991). Repellin et al. (1994) also placed
PB - 121 under drought tolerant group while WAT was classified as
moderately tolerant based on a study of the effect of edaphic drought on
the leaf water status, gas exchange and membrane lipids at the nursery
stage of five coconut varieties. Kasturi Bai et al. (2001) reported the extent
of variation in physiological characters among the parents and hybrids
at the nursery stage. In Sri Lanka, the drought tolerant Tall x Tall palms
were selected based on the mean yield and genotypic adaptation to
changes in climate over a 15-year period. Characterization of drought in
different coconut growing areas in six states of India falling under different
agroclimatic zones revealed that the dry spell length and intensity of
stress adversely affect the coconut and consequently nut yield (Naresh
Kumar et al. 2003). In this study, high adverse effect of length of dry-
spell on nut yield was noticed up to four years, with more impact during
the fourth year. Apart from this, adverse impact on the current year nut
yield was also observed.
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288
CHAPTER 5: Germplasm use
transpiration. The WCT and FMS, which are tolerant to water stress,
had thick leaflets, thick cuticle on both surfaces, larger parenchyma,
hypodermal and water cells compared to less tolerant ones (COD x WCT,
GBGD and MYD). Drought tolerant types had also more scalariform
thickening on xylem trachieds in vascular bundles and large sub-stomatal
cavities. These traits are lesser in size in moderately tolerant cultivar like
PHOT and WCT x COD. The values for these traits were least in
susceptible types like COD x WCT, GBGD and MYD. However, the
differences for these traits between moderately tolerant and susceptible
cultivars were not great. Certain parameters like epidermal cell size (upper
and lower) and guard cell size are related to the drought tolerance
character of a cultivar. It is possible that the cumulative effects of all
these traits contribute to drought tolerance (Naresh Kumar et al. 2000).
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COCONUT GENETIC RESOURCES
and effect of edaphic drought on the leaf water status, gas exchange and
membrane lipids (Pomier and de Taffin 1982; de Nuce de Lamothe and
Benard 1985; Repellin et al. 1994).
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CHAPTER 5: Germplasm use
291
Figure 1. Mechanism of drought tolerance in coconut
292
Leaf water potential+ Leaf let thickness+ Net assimilation rate+
Stomatal resistance+ Cuticle thickness+ Water use efficiency+
Ï
Transpirational rate- Fv/Fm+- yield of chlorophyll
Ï
Sub-stomatal cavity+
Epicuticular wax+ Palisade cell size+ fluorescence
Spongy cell size+
Ï Ï Ï
Water balance Leaf anatomy Photosynthetic efficiency
Ï Ï
COCONUT GENETIC RESOURCES
Ï
Ï Total dry matter+
Ï Ï Vegetative dry matter+
Osmotic adjustment Cell membrane integrity Reproductive dry matter+
Harvest index+
Ï Ï
Solute accumulation Superoxide dismutase+
Total soluble sugar+ Peroxidase+
Amino acid+ Catalase+ Position in drought-tolerant types:
Polyphenol oxidase- + high/increased; - low/decreased
Acid phosphatase-
L aspartate 2-oxoglutarate
amino transferase+
Nitrate reductase+
Lipid peroxidation-
Figure 2. Schematic diagram for screening drought tolerant coconut germplasm
Screening for drought tolerance in coconut
Seedling screening Adult palm screening Survey for drought-tolerant In vitro screening
Germplasm sown in nursery Germplasm blocks (Under palms (Gardens under no (Using PEG or
(maintained under non-water rainfed condition) management for decades; NaCl as
stress conditions) rainfed; drought prone areas) osmoticum)
Irrigate nursery for about 15 days Ranking of cultivars Use tolerant ones as parental
for survival capacity material for breeding
and stability drought tolerant variety
293
CHAPTER 5: Germplasm use
294
CHAPTER 5: Germplasm use
Conclusion
The results obtained so far indicate that variation exists among the Talls,
Dwarfs and hybrids for drought tolerant traits. Generally, Talls and
hybrids with Tall as mother palm have higher drought tolerance
compared to Dwarfs and hybrids with Dwarf as mother palm. The
heterosis for desirable traits can be exploited for breeding drought tolerant
varieties. Further, in situ tolerant palms should be identified and used in
breeding programme. These experiments can be extrapolated to other
germplasm sources, which were not studied so far, and for making
promising cross combinations. Since this requires a comprehensive study,
a global research network on this topic will facilitate the development of
varieties/hybrids with high drought tolerance and stable yield.
References
Batugal, PA. 1999. The role of international cooperation in the
development of biotechnology in coconut. Pp.19-30. In: C Oropeza,
JL Verdeil, GR Ashburner, R Cardena and JM Santamaria (eds).
Current advances in coconut biotechnology. Kluwer Academic Pub.,
The Netherlands.
295
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Bhaskara Rao, EVVB, RV Pillai and Jacob Mathew. 1991. Relative drought
tolerance and productivity of released coconut hybrids. Pp. 44 -149.
In: EG Silas, M Aravindhakshan and AI Jose (eds). Coconut breeding
and management. KAU, Vellanikkara 680 654. Thrissur, India.
Bonneau, X and K Subagio. 1999. Coconut growing in zones at risk of
drought. Plantations Recherche Développement 6: 432-442.
Bonneau, X, R Ochs, WT Kitu and Yuswohadi. 1993. Le chlore: Un
element essential de la nutrition minerale des cocotiers hybrids dans
le Lampung (Indonesie). Oleagineux 48: 179-189.
Bonneau, X, D Boutin, R Bourgoing and J Sugarianto. 1997. Le chlorure
de sodium, frtilisant ideal du cocotier en Indonesie. Plantations,
recherché, development 4: 336-346.
Bopaiah, MG, CC Biddappa and V Rajagopal. 1996. Is common salt an
alternative to potassium nutrition in coconut? Indian Coconut Journal
26 (11): 5-7.
Braconnier, S and X Bonneau. 1998. Effects of chlorine deficiency in the
field on leaf gas exchanges in the PB 121 coconut hybrid. Agronomie
18: 563-572.
Braconnier, S and JD Auzec. 1985. Anatomical study and cytological
demonstration of potassium and chlorine fluxes associated with oil
palm and coconut stomatal opening. Oleagineux 40: 547-551.
Braconnier, S and JD Auzec. 1990. Chloride and stomatal conductance
in coconut. Oleagineux 45: 259-265.
Chempakam, B, KV Kasturi Bai and V Rajagopal. 1993. Lipid
peroxidation in relation to drought tolerance in coconut (Cocos nucifera
L.) Plant Physiology & Biochemistry 20(1): 5-10.
Child, R. 1974. Coconut 2nd ed. Longman, London. Pp. 335.
Coomans, P. 1975. Influence des facteurs climatiques sur les fluctuations
saisonnieres et annuelles de la production du cocotier. Oleagineux
30: 153-159.
de Nuce de Lamothe, MW and G Benard. 1985. L’hybride de cocotier PB
121 (ou MAWA ) (NJM x GOA). Oleagineux 40: 255-266.
Fernando, WMU. 1987. San Ramon – Big with promise. Coconut Bulletin
4: 15.
Fernando, WMU and G Gajanayake.1997. Patterns of isozyme variations
in coconut (Cocos nucifera L.) populations used for breeding improved
varieties. Plantations, recherché, développement 4: 256-261.
Jayasekara, C, CS Ranasinghe and DT Mathes. 1993. Screening for high
yield and drought tolerance in coconut. Pp. 209-218. In: MK Nair,
HH Khan, P Gopalasundaram and EVV Bhaskara Rao (eds).
Advances in coconut research and development. Oxford & IBH
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299
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stress resistant varieties of coconut palm (Cocos nucifera L.). Pp. 299.
In: Proceedings of the Societe Francaise Physiologie Vegetale, Colloque
Sciences Vegetales, Saint-Malo, 12-14 October 1994, Paris, France.
Repellin, A, AT Pham Thi, A Tashakorie, Y Sahsah, C Daniel and Y
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Agriculture 6: 25-33.
Shivashankar, S. 1988. Polyphenoloxidase isozymes in coconut genotypes
under water stress. Plant Physiology and Biochemistry 15:87-92.
Shivashankar, S, KV Kasturi Bai and V Rajagopal. 1991. Leaf water
potential, stomatal resistance and activity of enzymes during the
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68 (2): 106-110.
Shivashankar, S and KV Nagaraja. 1996. Water stress induces kinetic
changes in the properties of an acid phosphatase isozyme from
coconut leaves. Plant Physiology and Biochemistry 23 (1):21-26.
Voleti, SR and V Rajagopal. 1991. Extraction and identification of
epicuticular wax in coconut. Plant Physiology and Biochemistry 18(2);
88-90.
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Influence of soil type on the development of moisture stress in coconut
(Cocos nucifera L.). Oleagineux 46: 505 - 509.
Voleti, SR, KV Kasturi Bai and V Rajagopal 1993 b. Water potential in
the leaves of coconut (Cocos nucifera L.) under rainfed and irrigated
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and EVV Bhaskara Rao (eds). Advances in coconut research and
development. Oxford & IBH Publishing Co Pvt. Ltd., New Delhi,
India.
Wickremaratne, MRT. 1987. Breeding coconuts for adaptation to drought.
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Introduction
Coconut (Cocos nucifera L.) varieties grown worldwide are popularly
classified as Tall, Dwarf or Hybrid. The Talls (T) and the Dwarfs (D) are
mostly selected races of economic importance among the local farmers.
Most of them evolved from continuing natural or mass selection. The
hybrids are mostly produced from intercrossing these selected races or
traditional varieties (i.e., D x T, T x D, T x T) to develop the desired
ideotypes, which for most breeders meant varieties with broad
adaptability, pests and disease resistance, and high yield.
Promising hybrids
A few capable national coconut breeding programmes in coconut
growing countries, either on their own or through foreign-assisted
projects, have been in the forefront of collecting, conserving, evaluating
and breeding coconut germplasm since the early 1980s. Each of these
country programmes has produced their own set of recommended or
promising hybrids. A survey of the performance of some of these hybrids
was conducted by the International Coconut Genetic Resources Network
(COGENT) (Batugal 2004), and the results of this survey are summarized
and analyzed below.
China
The Wenchang Coconut Research Institute’s sole recommended hybrid
is a cross between Malayan Yellow Dwarf (MYD) and the local Hainan
Tall (HAT) variety. This MYD x HAT hybrid (WY78F1) exhibited early
flowering (3-4 years) and 3-4 fold increase in terms of harvested nuts
(80/palm/year) and copra (4 t/ha/year), compared to the Tall parent.
The Philippines
The Philippine Coconut Authority (PCA) recommended nine hybrids
derived from single crosses involving the local cultivars, Catigan Green
Dwarf (CAT), Tagnanan Tall (TAG), Baybay Tall (BAY), Laguna Tall
(LAG), Bago-Oshiro Tall (BAO), and the introduced varieties, Malaysian
Red Dwarf (MRD) and Polynesian Tall (PYT). Most of these recommended
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hybrids started flowering on the 3rd to 4th year. The average number of
nuts per palm ranged from 117 to 155 and copra yield per hectare, from
4-6 tonnes. The local tall BAY was comparatively good producing 114
nuts/palm with a copra yield of 5t/ha. Among the nine hybrids, MRD x
TAG (PCA 15-2) and MRD x BAY (PCA15-3) were outstanding giving
the highest number of nuts (144-155/palm) and copra yield (6t/ha).
Thailand
The Chumphon Horticulture Research Centre (CHRC) of the Horticulture
Research Institute of Thailand recommends three high-yielding hybrids:
Sawi Hybrid No.1 (an introduced hybrid known as PB 121 or MAWA),
and the locally developed hybrids Chumphon Hybrid No.60 (Maphrao
Yai or Thai Tall x West African Tall) and Chumphon Hybrid No. 2 (
MYD x Thai Tall). A trial comparing the locally developed hybrids with
the local Thai Tall (THT) in 1975 showed that THT yielded the least. The
recommended hybrids exhibited nut and copra yields ranging from 80-
126/palm and 3.4 4.2t/ha, respectively.
Vietnam
The Oil Plant Institute (OPI) of Vietnam recommends seven introduced
high-yielding hybrids in the country which have significantly outyielded
the local Tall (Ta). The introduced hybrids were PB111, PB121, PB 132,
PB 141, JVA 1, JVA2 and CRIC 65 with nut production ranging 48-69/
palm in 1996. The local variety Ta yielded 31-35 nuts on the same year.
OPI is currently testing six local hybrids in Dong Go Experimental Center
(Eo x Ta; Tam Quan x Ta; Tam Quan x BAOT); and in Binh Thanh
Experimental Station (MYD x Renell Island Tall; MYD x Palu Tall; and
MYD x Ta).
Bangladesh
The Agricultural Research Institute (BARI) has developed two high-
yielding coconut varieties: BARI Narikel –1 and BARI Narikel-2. These
varieties are broadly adapted and capable of producing 65-70 nuts/palm
throughout Bangladesh. In addition, BARI is recommending two
introduced varieties to the country’s coconut growing communities,
namely: Sri Lanka Tall (SLT) and Malaysian Yellow Dwarf (MYD).
India
The Central Plantation Crops Research Institute (CPCRI) has released
the largest number (12) of single-cross hybrids among the surveyed
countries, involving Chowgat Orange Dwarf (COD), West Coast Tall
(WCT), Laccadive Ordinary (LCT), Gangabondam (GBGD), MYD, SS
Apricot by KAU (SSAT) and East Coast Tall (ECT). All the hybrids
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COCONUT GENETIC RESOURCES
Sri Lanka
The Coconut Research Institute (CRI-SL) has developed two hybrids,
[(Sri Lanka Green Dwarf (SLGD) x Sri Lanka Tall (SLT)] and SLT x SR,
and a first generation inbred (SLT x SLT) for its national replanting
programme. Their yields ranged from 80-125 nuts/palm and 3.6 – 4.0t
copra/ha. Hybrids’ nut yields are double that of the usual yield of the
local cultivar, Sri Lanka Tall, but their copra content/yields are similar.
Vanuatu
The Vanuatu Research and Training Centre have produced hybrids
involving the local cultivars Vanuatu Tall (VTT) and Vanuatu Red Dwarf
(VRD), and the introduced varieties Renell Island Tall (RIT) and Brazilian
Green Dwarf (BGD). The Malaysian Red Dwarf (MRD) was also used
as a mother palm for crossing with RIT but the resulting hybrids only
performed slightly better (in terms of copra yield) compared to the local
VTT and were very susceptible to coconut foliar decay (CFD). The BGD
crossed with either RIT or VTT produced the best copra yields of 4.4-5.2
t/ha but they were also found to be very susceptible to CFD. The VRD x
VTT hybrids had lower copra yields (3.3-3.7t/ha) but were found to be
more tolerant against CFD. Both the traditional and improved VTT types
had the lowest reported copra yields of 2.6-2.8 t/ha, but comparable
with the hybrid MRD x RIT.
Côte d’Ivoire
The CNRA Marc Delorme Research Station has initially identified seven
outstanding hybrids: PB 213 (WAT x RIT), PB 214 (WAT x VTT), PB121
(MYD x WAT), PB 132 (MRD x TAT or Tahitian Tall), PB123 (MYD x
RIT) and PB111 (CRD or Cameroon Red Dwarf x WAT).These hybrids
flower very early (40-57 months after field planting) under Côte d’Ivoire
conditions. Despite early flowering, they produced from 100 to 132 nuts/
palm/year, which is 34% to 138% higher than the population control
West African Tall (WAT). Further, their copra yields ranged from 3.15-
4.8t/ha or 86-135% more compared with WAT.
Ghana
All coconut cultivars in Ghana are considered to be at risk from the Cape
St. Paul Wilt disease (CSPWD), a lethal yellowing type of disease. Hence,
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Tanzania
The Mikocheni Agricultural Research Institute (MARI) is currently testing
six hybrids with the local East African Tall (EAT) as sole pollinator. Mother
palms included the Malayan Green Dwarf (MGD), CRD, Pemba Red
Dwarf (PRD), MYD, MRD and improved EAT populations. In addition
to determining their yield performance, the F1 progenies are also being
evaluated for their resistance to lethal disease and tolerance to drought
stress.
Mexico
Coconut research at the Instituto Nacional de Investigacion Agropecuaria
Y Forestal is focused on developing hybrids resistant to lethal yellowing
disease (LYD). Initial hybrids were mainly derived from crosses between
MYD and improved Pacific Tall populations. Intra population crosses of
selected Pacific Tall were also done and these are currently being tested.
Agroclimatic
In a comprehensive hybrid performance assessment study (Rethinam et.
al 2004) initiated in 1998 in 10 countries, most of the participating
countries reported that, with few exceptions, hybrids generally came into
early bearing and exhibited better productivity in the wet zones than in
intermediate and dry zones. The result of the study suggested that to
maximize the potential of most hybrids, they should be planted under
favourable soil and moisture conditions.
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COCONUT GENETIC RESOURCES
Farmers’ preferences
As part of the Asian and Pacific Coconut Community (APCC)/COGENT
study, farmer respondents in the surveyed countries were asked to
indicate their varietal preference and their reasons for their selection. Of
the total 381 responses, 55.6% were in favour of hybrids and 28% preferred
planting the local and/or selected Talls (Table 1). However, individual
countries showed diverse rates of preference for hybrids. In Samoa, all
the farmers covered in the survey stated they would grow hybrids, given
a second chance. In Thailand, 70% of the farmers remained satisfied
with the hybrids and the rest preferred to plant Tall variety. In Indonesia,
where hybrids have already spread to a large extent, only 5.56% wanted
to plant the same coconut hybrids while 99.44% opted for selected local
Talls and locally produced hybrids for planting the next time. High yield,
early bearing and good nut size were cited as the main reasons for
satisfaction with the hybrids. And the major reasons made known by
the farmers for their dissatisfaction with hybrids are their being vulnerable
to moisture stress, high input requirement and susceptibility to pests and
diseases.
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Table 2. Coconut productivity in farmers’ field and research stations, and area
planted to hybrids
Source: (P Batugal and J Oliver, 2003)
Annual yield
(A) Farmers' (B) Research Area grown to
Fields/National Station/Hybrids Technology gap hybrids
Country
Average [100-(A/B x100)] (% of production
Nuts Copra Nuts Copra area )
-1 -1
(t ha ) (t ha )
South Asia
Bangladesh 21/palm 69/palm 70 nil
India 6892/ha 23 700/ha 71 14
Sri Lanka 42/palm 63/palm 33 11
Southeast/East
Asia
Indonesia 1.1 3.5 69 5
Malaysia 10 000/ha 23 000/ha 57 n.d.
Philippines 0.78 4-6 84 n.d.
Thailand 1.2-1.5 3.0 55 10
Vietnam 38-40/palm 55-80/palm 42 <0.1
China 1.27 3.6 65 1.5
South Pacific
Fiji 0.3-0.5 2.0 80 <5
PNG 0.66 2.8-3.6 80 n.d.
Africa
Ghana 20/palm n.d. 3
Tanzania 40/palm 80/palm 50 n.d.
LAC
Jamaica 0.8 3.7 78 n.d.
Mexico 0.65 4.0 84 1
Conclusion
The country reports on recommended hybrids (Batugal 2004) and the
APCC surveys on the performance of high-yielding hybrids and farmers’
varietal preferences indicated that there is no universal hybrid and that,
generally, hybrids perform better than traditional varieties under good
rainfall and soil conditions. Based on these analyses, national breeding
programmes should be designed to develop and provide either varieties
or hybrids that suit specific agroecological conditions and small-scale
farmers’ needs. In the end, each national coconut breeding programme
should be able to propose to farmers a set of well-evaluated varieties
including Dwarfs, Talls, and Hybrids.
COGENT is proposing a global breeding programme to address the
collective needs of COGENT member countries instead of merely those
of individual countries and the adoption of participatory plant breeding
approach to incorporate farmers’ varietal preference. The programme
aims to significantly increase the choice of hybrid cultivars among coconut
growing countries, by maximizing the use of available genetic resources
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COCONUT GENETIC RESOURCES
References
Batugal, P. 2004. Country survey (2001-2003): Proposed globally
coordinated breeding programme. COGENT. IPGRI-APO, Serdang,
Selangor, Malaysia. (Unpublished).
Batugal, P and V Ramanatha Rao (eds). 1998. Coconut breeding. Papers
presented at a workshop on Standardization of Coconut Breeding
Research Techniques, 20-25 June 1994, Port Bouet, Cote d’Ivoire.
IPGRI-APO, Serdang, Selangor, Malaysia. 150p.
Batugal, P and J Oliver (eds). 2003. Poverty reduction in coconut growing
communities Volume I: The framework and project plan. IPGRI-APO,
Serdang, Selangor, Malaysia. 337p.
Rethinam, P, P Batugal and F Rognon. 2004. Performance evaluation of
coconut varieties and farmers’ varietal preferences. APCC, Jakarta,
Indonesia and COGENT, IPGRI-APO, Serdang, Selangor, Malaysia.
(Unpublished).
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Introduction
Coconut, (Cocos nucifera L.) has two forms, the Talls and Dwarfs.
Predominantly, in all coconut growing countries, Tall varieties are
commercially grown for copra and oil. Dwarfs are primarily grown in a
limited area for ornamental purpose as well as for its sweet tendernut
water for drinking. Talls are highly cross pollinated and hence, the
variations in nuts are spectacular. Dwarfs are mostly self pollinated.
Studies on varietal improvement using the existing germplasm were taken
up in many countries over a period of more than seven decades. This has
resulted in the identification of many high yielding varieties and hybrids
of different Tall and Dwarf combinations. Inter and intra-varietal crosses
were made to develop progenies with combined desirable characteristics
of parents and over-dominant traits particularly on yield performance.
In India, the first report on hybrid vigour in progenies resulting from
the crosses between Tall and Dwarf varieties was available in 1932. In
Sri Lanka, the results of exploratory crosses became available in 1948. In
both these countries, organized production and distribution of hybrid
planting material began in the early fifties. Similar programmes were
taken up in the seventies by other countries especially Indonesia, Côte
d’Ivoire, Malaysia, Philippines and Vanuatu.
Although many high yielding varieties and hybrids were developed
and commercial seed production programmes were started, there were
always some reservations by small holders of coconut in using them as
planting materials. In order to assess the extent of adoption of these
varieties and hybrids by farmers, identify the constraints experienced by
the farmers in adopting them under field conditions and further assess
the yield performance of these hybrids and varieties, three studies were
conducted during the year 1980, 1988 and 1998 in different coconut
growing countries.
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COCONUT GENETIC RESOURCES
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COCONUT GENETIC RESOURCES
introduced from Côte d’Ivoire. The local hybrids produce bigger sized
nuts than PB 121 and also exhibit buffering ability against environmental
stress. The local hybrid Catigan Green Dwarf x Laguna Tall has been
released as PCA- 15-1 for mass adoption (Santos 1989).
In Jamaica, crop improvement studies were started since 1950 with
more emphasis on evolving resistant strains for lethal yellowing disease.
All the three Malayan Dwarfs were found to possess a high degree of
resistance and only a very small percentage of MYD has been affected by
lethal yellowing. The D x T hybrids involving the Malayan Yellow, Green
or Red Orange Dwarf and Panama Tall as parents have been found to
inherit sufficient immunity to the lethal yellowing disease and also have
the capacity for high yield. This hybrid is locally called Maypan (Harries
1971).
In Samoa, Malayan Red Dwarf x Rennel Tall hybrid was produced
on a large scale in a coconut seed garden established in 1977 (Efu 1989).
Under the FAO Project, the production of open-pollinated MRD x Samoa
local Tall was undertaken at Aela where Dwarf palms were planted
with local Talls in the surrounding areas. The natural hybrids found in
Aela were planted in three locations along with Samoan Tall in 1980.
In Thailand, among the different hybrid combinations tested, PB 121
(MYD x WAT) has displayed greater precocity and has also been found
to give more uniform yields than selected Thai Talls. PB 121 was released
as Sawi 1 to farmers for general cultivation. Both MYD x WAT and Thai
Tall x WAT have been found superior to Thai Tall variety. Two more
hybrids, Chumphon Hybrid No. 60 (Maphrao Yai x WAT) and
Chumphon Hybrid No. 2 (MYD x Maphrao Yai), were released in the
country in 1987 and 1995, respectively.
In Vanuatu, a coconut improvement programme was started during
1962. A number of combinations involving different Talls like Vanuatu
Tall, Samoan Tall, Rennel Tall and Rotuman Tall were produced and
their field performance was studied under different locations (Calvez
1989). One of the promising combinations, Vanuatu Tall (VTT) x Rennel
Tall (RLT), is under field test for tolerance to Foliar Decay disease. Vanuatu
Red Dwarf (VRD) x VTT has also been planted in 1984. Initial trials have
indicated that T x T hybrids might be superior.
In Tanzania, production of the hybrids MAWA (MYD x WAT) and
Camwa (CRD x WAT) was initiated in 1981-1982. However, these
hybrids were not different from local East African Tall with respect to
tolerance to lethal yellowing and drought.
In Vietnam, high yielding hybrid seednuts were imported in 1985
and the seedlings raised from them were planted in seven different
adaptability trial sites in various agroecological zones. The objectives were
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Other countries
In Fiji, a seed garden is now producing high yielding hybrids using
Malayan Yellow Dwarf or Malayan Orange Dwarf with Rennel Tall or
Rotuma Tall. In Tonga, a seed garden has been established to produce
hybrids. Similarly in Tuvalu, a small seed garden has been operated to
produce hybrids of Malayan Yellow Dwarf and Malayan Orange Dwarf
with Rennel Tall or with local coconuts. In the Solomon Islands, where
controlled pollination began in the 1960’s, a replanting programme is
being carried out with the Malayan Red Dwarf x Rennel Tall hybrid.
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COCONUT GENETIC RESOURCES
The average size of the sample farms in the six countries was 3.5 ha with
a range of 0.44 to 20 ha. The total area covered by all the farms was
1079.62 ha. The farmers possessing below 2 ha formed over 60% of the
sample although their share in the total area was only below 14%. On
the other hand, farmers with area above 2 ha but below 8 ha formed
around 30% but commanded over 36% of the total area. At the same
time, the farmers who had farms of the size between 8 and 20 ha had a
share of over 42% in the total area although they formed only 9% of the
total number of farmers. Of the total 308 farms in the sample, 124 or
40% were in the wet zone, 125 or 41% fell in the intermediate zone and
59 or 19% represented the dry zone.
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The general trend was that the hybrids came into early bearing in the
wet zone although exceptions were observed in some countries.
Irrespective of the growing zones, the average pre-bearing period for D
x T and T X D hybrids observed in India, Sri Lanka and Vanuatu were
4.4 and 4.7 years, respectively. In the case of T x T hybrids in Sri Lanka
and Vanuatu, the average fruit initiation was 5.8 years. Selected local
Talls in the Philippines, Vanuatu and Vietnam, started bearing fruits at
an average of 5.5 years while the Malayan Dwarfs of Jamaica and selected
Dwarfs of Vietnam were more precocious with an average bearing age
of 3.7 years.
In India, the production of nuts and copra was highest for T x D
hybrid in the wet zone, but was such only in terms of nuts in the
intermediate zone. For D x T hybrid, the production of nuts as well as
copra output was much higher in the intermediate and dry zones than
in the wet zone. The difference in the production between T x D and D x
T revealed the preference of the former for more favourable soil moisture
relations.
In Indonesia, the performance of Mawa hybrid was recorded in the
wet zone and that of Nias Yellow Dwarf hybrid (NYD x WAT) in the
intermediate zone. Since their agronomic performances were observed
under different zone conditions, their optimum growing conditions for
maximum productivity has not been elucidated.
The Malayan Dwarf variety and the Maypan hybrid were compared
under the different zones in Jamaica. In all the three zones, the Malayan
Dwarf outperformed the hybrid in precocity of bearing, as well as in the
production of nuts and copra. Productivity in terms of nuts and copra
output was also higher for the Malayan Dwarf compared with the
Maypan hybrid through all the zones. The Dwarf variety and hybrid
showed preference for wet agroclimatic zone to maximize production.
In the Philippines, the two Tall types (Laguna and Tagnanan) , and
two hybrids (Mawa and PCA 15-1) exhibited better productivity in the
wet zone than in the other two zones with the lowest in the dry zone
indicating the sensitivity to soil moisture stress. Between the two hybrids,
PCA 15-1 was found to be superior to Mawa in all the three zones.
One significant observation recorded in the Philippines studies was
the better productivity of Laguna Tall compared to the two hybrids in all
the three zones. Hence, the Laguna Tall cultivar is a better option for
planting in the wet, intermediate and dry zones.
In Sri Lanka, the D X T showed preference for the dry zone. When
compared with San Ramon x Dwarf, the latter yielded better in the
intermediate zone but production figures for the other two zones were
not available for this hybrid. The data for T x D hybrid were available
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COCONUT GENETIC RESOURCES
JAMAICA
Wet Tall - 5850 3500 1.67
Malayan Dwarf 3.3 20 588 6277 3.28
Maypan hybrid 4.1 12 775 4125 3.10
Intermediate Tall - - - -
Malayan Dwarf 3.3 13 013 5733 2.27
Maypan hybrid 4.5 6230 3785 1.65
Dry Tall - - - -
Malayan Dwarf 3.3 18 545 6440 2.88
Maypan hybrid 4.4 11 527 4388 2.63
PHILIPPINES
Wet Laguna Tall 6.0 11 214 3528 3.18
Tagnanan Tall 6.0 7342 2738 2.68
Mawa hybrid 4.0 11 351 4087 2.78
PCA15-1 hybrid 4.0 10 624 3368 3.15
Intermediate Laguna Tall 6.0 11 214 4151 2.70
Tagnanan Tall 6.0 6465 3221 2.00
Mawa hybrid 4.0 9849 4809 2.05
PCA15-1 hybrid 4.0 9276 3963 2.34
Dry Laguna Tall 5.0 9528 4744 2.00
Tangnanan Tall 5.0 5460 3704 1.47
Mawa hybrid 4.0 7029 5530 1.27
PCA 15-1 hybrid 4.0 8366 4557 1.84
SRI LANKA
Wet TxT 6.2 5 4492 5500 0.82
DxT 4.70 8415 6000 1.40
Intermediate TxT - 10 620 - -
San Ramon x D 6.0 12 883 - -
DxT 4.0 7952 4360 1.82
TxD 5.5 10 166 4400 2.31
Dry TxT 5.0 9575 5000 1.92
DxT 4.0 9106 - -
SAMOA
Wet Tall 6.0 4006 5053 0.79
Hybrid 3.5 6694 4687 1.43
Intermediate Tall 5.6 3860 5053 0.76
Hybrid 3.5 7649 4687 1.63
VANUATU
Local Tall 5.0 9620 6013 1.60
Improved Tall 5.0 11 840 5382 2.20
TxT 6.0 12 580 4341 2.90
DxT 4.0 23 200 6629 3.50
VIETNAM
Wet Tall 5.4 4903 4064 1.21
Dwarf 3.7 19 456 - -
Hybrid 4.0 5364 5000 1.07
Intermediate Tall 5.25 7375 4265 1.73
Dwarf 5.0 26 667 - -
Hybrid 3.5 6195 5500 1.13
Dry Tall 5.0 5360 5188 1.03
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CHAPTER 5: Germplasm use
only for the intermediate zone which showed higher productivity than
those of D x T hybrid. The T x T performed well under the intermediate
and dry conditions but had the least number of nuts and copra yield
among the test materials when planted under the wet zone.
In Samoa, the hybrid yield was more than that of Tall in both the wet
and intermediate zones. The average productivity of hybrid through the
two zones was 7172 nuts or a copra equivalent of 1.53t against 3933
nuts or 0.78 t of copra/ha/year of the Tall.
Differential performance of local Tall, improved Tall, T x T and D x T
was recorded in Vanuatu for only one zone. The performance of D x T
was found to be far superior compared with all the other types in terms
of precocity, number of nuts and copra output.
The Dwarf types produced significantly more nuts/ha compared with
the hybrid and Talls in Vietnam. The Dwarf variety yielded profusely in
the wet and intermediate zones but its production figures for the dry
zone were not recorded. Further, its fruits were mostly consumed as
tendernut.
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COCONUT GENETIC RESOURCES
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CHAPTER 5: Germplasm use
In Samoa, all the farmers covered in the survey stated that they will
grow the hybrid, given a second chance. Out of these farmers, 47% also
wanted to grow the local Tall besides the hybrid. In Thailand, 70% of the
farmers remained satisfied with the hybrids and the rest preferred to
plant Tall variety. The variety preferred by 54% of the farmers in Vietnam
for planting, given a second chance, was the local Tall. Only 26% of the
farmers wanted to grow hybrid and the balance 20% stated that they
would grow the local Dwarf cultivar, Xiem.
Wet 31 91 43 165
Intermediate 59 75 8 142
Dry 18 46 10 74
Total 108 212 61 381
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COCONUT GENETIC RESOURCES
eight year after coming into production. The same trend was observed in
Sri Lanka. These results highlight the fact that the productivity of some
of the hybrids, even under intensive management, is not significantly
different than those of selected Tall varieties; and that the production
technology of hybrids has to be improved if farmers are to be benefited
from their cultivation.
Except, perhaps, in Côte d’Ivoire, the production of hybrids in most
other countries has been organized without developing adequate
populations of strains or ecotypes tested for specific combining ability.
The general combining ability of the existing varietal forms is presently
the yardstick for the production of hybrid combinations, which invariably
show differential performance and exhibit undesirable traits when grown
under field conditions. There is a scope for identifying ecotypes possessing
superior traits from among the available cultivars and testing them for
both general and specific combining abilities with other strains or
ecotypes. The populations comprising selfed progenies of those ecotypes,
proven to be the best combiners when established, can serve as the basic
material for evolving better hybrids. It is not difficult to identify special
strains or ecotypes in each country through participatory approach.
Among the countries where coconut hybrids have been introduced,
Indonesia appears to have taken the lead with having 244 310 ha under
hybrids in 1996 with the estimated production of 121 729 t of copra per
year, which is only 50% of the average productivity of the Tall variety in
that country. Therefore, when farmers in that country are given the
opportunity to plant coconuts again, only 5.56% of them wanted to plant
the introduced hybrids, while 94.44% of the farmers wanted to plant
selected local Talls, T x T hybrids and the locally produced Khina hybrids.
The experience in most of the countries is that the intervarietal hybrids
perform well only under intensive management hence, their poor
adoption by the small- and medium-scale farmers who are not used to
high external input farming in coconut. As long as the new hybrids are
not amenable to low external input farming, the farmers may not opt for
them either for new planting or replanting. Appropriate breeding
technology has to be perfected for producing hybrids possessing potential
for higher productivity under average management without exhibiting
undesirable traits.
Based on the results of the trials, the following recommendations are
made:
1. Ecotypes possessing favourable traits should be identified in each
country through participatory approach. These ecotypes should
be crossed with selected cultivars and the best combiners identified
through progeny testing. The parents of the promising crosses
322
CHAPTER 5: Germplasm use
References
Balakrishnan, PC, S Sukumaran Nair and K Kumaran. 1988. Coconut
improvement: Six decades of coconut research. Kerala Agricultural
University. Pp. 7-37.
Balingasa, EN and CB Carpio. 1976. Genetic potential of some coconut
populations of the Philippines. Pp. 72-81. In: NM Nayar (ed). Coconut
research and development. Wiley Eastern Ltd.
Bourdeix, R, A Sangare, JP Le Saint, J Meunier, JP Gascon, F Rognon and
MW de Nuce de Lamothe. 1993. Coconut breeding at IRHO and its
application in seed production. Pp. 79-94. In: MK Nair et al. (eds).
Advances in coconut research and development. Oxford and IBH
Publishing Co. Pvt. Ltd., New Delhi, India.
Calvez, C. 1989. Assessment of experience with high yielding varieties,
Vanuatu’s experience. Pp. 1-22. In Proceedings of the APCC/
COCOTECH/XXVI/S2-07.
Chan, E. 1983. Progress in coconut breeding in United Plantations Bhd,
Malaysia. Oleagineaux 38 : 6, 371-376.
Darwis, Michellia. 1996. Coconut research in Indonesia. Pp. 207-214.
In: PK Thampan (ed). Coconut for prosperity. Peekay Tree Crops
Development Foundation, Kerala, India.
Davis, TA, H Sundasrip and SN Darwis. 1985. An overview of research
323
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324
CHAPTER 5: Germplasm use
collection in Papua New Guinea. Pp. 33-42. In: MK Nair et al. (eds).
Advances in coconut research and development. Oxford and IBH
Publishing Co. Pvt. Ltd., New Delhi, India.
Rognon, F and MW de Nuce de Lamothe. 1978. Harvesting and
conditioning of pollen for the pollination of coconut seed gardens.
Oleagineaux 33:1, 22-23.
Santos, GA. 1989. Assessment of experience with high yielding varieties,
Philippines experience. Pp. 1-23. In: Proceedings of the APCC/
COCOTECH/ XXVI/S2-04.
Santos, GA, RT Bahala, SB Cano and BV dela Cruz. 1986. Yield and
agronomic trials of four variety hybrids and some local tall coconut
plantations in the Philippines. Oleagineux 41 : 6, 269-280.
Sumbak, JH. 1976. Trials with some coconut varieties and hybrids in
Papua New Guinea. Pp. 82-84. In NM Nayar (ed). Coconut research
and development. Wiley Eastern Ltd., New Delhi, India.
Sumith de Silva. 1989. High-yielding varieties of coconut: An intra-
regional study on small farmer’s experience. APCC, Jakarta,
Indonesia.
Tarigans, DD. 1989. Assessment of experience with high yielding varieties,
Indonesian experience. Pp. 1-29. In: Proceedings of the APCC/
COCOTECH/ XXVI/ S2-02.
Thampan, PK. 1993. Handbook on coconut palm. Oxford and IBH
Publishing Co. Pvt. Ltd., New Delhi, India.
Turner, P. 1989. Assessment of experience with high yielding varieties:
Papua New Guinea’s experience. Pp. 35-43. In: Proceedings of the
APCC/ COCOTECH/ XXVI/ S2-03.
Wickramaratne, MRT. 1989. Assessment of experience with high yielding
varieties of coconut in Sri Lanka experience. Pp. 66-75. In Proceedings
of the APCC / COCOTECH / XXVI /S2-06.
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COCONUT GENETIC RESOURCES
Introduction
The main objectives of the multilocation trials are: 1) to assist each of the
six participating countries in identifying suitable high-yielding varieties/
hybrids with high adaptation to prevailing local conditions; and 2) to
estimate genotype x environment (G x E) interaction, which will serve as
a guide to the application of the results to other countries with similar
growing conditions.
Each test country compared the six common multi-site hybrids
produced and shipped from Côte d’Ivoire with 4-8 of its best hybrids/
varieties. The imported hybrids are four Dwarf x Tall and two Tall x
Talls which have been proven to have good yield potential in previous
trials. Each experimental unit or plot consisted of 16 palms, planted in a
triangular pattern at 9m in a randomized complete block design (RCBD)
with five replications. When sufficient vegetative and reproductive data
will have been generated, statistical analysis shall be done at country
level to compare the different genetic materials, while a combined data
analysis will be conducted to determine the interaction between genotype
and environment.
Project implementation
The project was approved by the Common Fund for Commodities (CFC)
Executive Board on 22 October 1996 and funds were released to IPGRI
in January 2000. However, the six participating countries and IPGRI pre-
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COCONUT GENETIC RESOURCES
Major achievements
The most important result of the project is the identification of 16 early
bearing and high-yielding new coconut hybrids (Table 2). The first trial
showed that 16 out of the 34 test trials in the CFC-funded project started
to flower and produce fruits in Brazil, Jamaica and Mexico in 2.5-3.0
years after planting compared to the seven years it would normally take
the traditional Tall varieties to reach fruiting stage. In Brazil, two hybrids
from Côte d’Ivoire and two local hybrids flowered; in Jamaica, all six
hybrids produced in Côte d’Ivoire flowered but none of the local hybrids;
while in Mexico, only one hybrid produced in Côte d’Ivoire and eight
locally produced hybrids flowered. On the other hand, flowering was
not observed in the hybrids planted in Benin, Côte d’Ivoire and Tanzania
during the same period. These results suggest that the drought in Africa
and the generally drier conditions in that region compared to the LAC
region had a negative effect on early flowering of the hybrids, suggesting
a possible G x E interaction. This interaction could be verified with the
vegetative and reproductive plant measurements and biotic and abiotic
data to be gathered and analyzed in the next five years.
Based on the yield projection of the potential of the 16 fruiting hybrids
on their fourth year (as observed in preliminary trials), they have the
potential to produce up to five tonnes of copra (dried kernel) per hectare
per year at the peak of production (at 10-12 years) compared to the one
metric tonne of copra generally produced by the traditional Tall cultivars.
The impact of the results from this CFC-funded project is significant as it
has the potential to increase coconut yields of resource-poor smallholder
coconut farmers by up to five-fold if the results are effectively promoted,
with good management, in many coconut growing communities and
countries. Although the hybrids in the second trial are all growing well
in five countries (except Benin), the potential of the hybrids could only
be determined when they start to produce fruits three more years after
the project termination.
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CHAPTER 5: Germplasm use
Table 2. Coconut hybrids that started fruiting 2.5 - 3.0 years after planting (with
check)
Hybrids produced in Cote d’Ivoire Brazil Mexico Jamaica
MYD x WAT ; ; ;
MRD x VTT ;
CRD x RIT ;
MRD x TAGT ; ;
SLT x TAGT ;
VTT x TAGT ;
Locally produced hybrids
MYD x MXPT05 ;
MYD x MXAT ;
MYD x MXPT10 ;
MYD x MXPT11 ;
MYD x MXPT02 ;
MYD x MXPT09 ;
MYD x MXPT14 ;
MYD x PNT ;
BGD x BRT ;
BGD x VTT ;
In Tanzania, although the few seedlings planted from the first batch of
seednuts did not grow well due to drought, fire and termite infestation,
the seedlings in the second replicated trial were very robust and were
growing very well and are expected to flower within the next 24 months.
In Côte d’Ivoire, both the seedlings in the first and second batches of
seednuts are growing well. Oryctes beetle infestation is under control
through a good integrated pest management system. In Benin, the plants
from the first batch of seedlings did not do very well due to severe drought
while the plants in the second batch are growing well in the three blocks
(replications). The two blocks located in the low-lying area of the
experimental field were waterlogged and remedies are being made to
construct a drainage system.
In Jamaica, the plants in the second trial are growing well, despite
some damage by the lethal yellowing disease. In Brazil, the plants in the
second batch are growing well except for a few missing hills which were
replanted.
Capacity building
The second most important achievement of the project is capacity
building. Based on all project components, 182 coconut researchers
participated in 15 training courses and 863 attended various meetings,
conferences and workshops for a total of 1045 coconut researchers
worldwide whose research capacities have been enhanced (Annex 1).
These events allowed coconut researchers and officers worldwide to
enhance their skills on coconut genetic resources research and shared
expertise, experiences and ideas to address common problems and
329
Reference
COCONUT GENETIC RESOURCES
Reference
Batugal, P, D Benigno and J Oliver (eds). 2005. Coconut hybrids for
smallholders. CFC Technical Paper No. 42. CFC/IPGRI. 235p.
330
CHAPTER 5: Germplasm use
A. TRAINING COURSES
The Sub-Regional Training on aspects of coconut Station Cocotier Marc 16-26 9
STANTECH Training germplasm collecting, Delorme June
Course for Africa conservation and documentation, Abidjan, Côte d’ivoire 1997
and breeding techniques
Regional STANTECH Training on aspects of coconut Coconut Industry 14-25 6
Training Course For Latin germplasm collecting, Board (CIB) July
America And The conservation and documentation, Kingston, Jamaica 1997
Caribbean and breeding techniques
Coconut Germplasm Training on aspects of coconut Philippine Coconut 1-12 11
Collecting and germplasm collecting and Authority (PCA) Sep
Conservation Training conservation techniques Zamboanga, 1997
Course Philippines
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COCONUT GENETIC RESOURCES
B. WORKSHOPS AND MEETINGS WITH INVITED SPEAKERS FROM ADVANCED LABORATORIES AND
PRODUCER COUNTRIES
Cadang-cadang viroid-like Consultation on the Cadang-cadang Serdang, Malaysia 21-23 14
sequences meeting viroid-like sequences Apr
1997
LAC coconut regional project Initial consultation to refine an LAC Kingston, Jamaica 7-12 7
proposal formulation meeting coconut regional project proposal July
1997
Coconut Genetic Resources Review the progress of the Bogor, Indonesia 15-17 28
Network In Asia and the Pacific conservation and utilization of the Sep
Region (CGRNAP) Phase coconut genetic resources project 1997
1/Phase 2 annual Review and and work plans
Planning Meeting
Annual meeting, Coconut multi- Review the progress of the coconut Bogor, Indonesia 18-20 28
purpose uses project multipurpose uses project and work Sep
plans 1997
th
6 COGENT Steering Review the progress of COGENT Port Bouet, Côte 13-15 14
Committee meeting and work plans d’Ivoire Nov
1997
ADB-Funded Projects Annual Review the progress of the Kuala Lumpur, 29-31 29
Meeting germplasm collecting and Malaysia Oct
conservation project and work plans 1998
IFAD-Funded Projects Annual Review the progress of the coconut Kuala Lumpur, 2-4 21
Meeting multipurpose uses project and work Malaysia Nov
plans 1998
International Coconut Review the progress of the field and Madang, Papua New 6-7 20
Genebank Workshop regional genebanks project and work Guinea Nov
plans 1998
th
7 COGENT Steering Review the progress of COGENT Madang, PNG 9-11 20
Committee meeting and work plans Nov
1998
IFAD-funded project meeting Review the progress of the coconut Ho Chi Minh city, 13-15 27
multipurpose uses project and work Vietnam Sep
plans 1999
ADB Phase 2 project meeting Review the progress of the Ho Chi Minh City 16-17 27
germplasm collecting and Vietnam Sep
conservation project and work plans 1999
COGENT Steering Committee Review the progress of COGENT Ho Chi Minh City , 20-22 16
meeting and work plans Vietnam Sep
1999
nd
2 International Coconut Review the progress of the project Merida, Mexico 14-17 28
Embryo Culture Workshop and work plans Mar
2000
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CHAPTER 5: Germplasm use
Meetings of ADB/IFAD Funded Review the progress of the collecting/ Apia, Samoa 26-30 20
Coconut Research Projects conservation and multipurpose uses project Jun
and Future Directions of the and work plans 2000
Coconut Industry in the South
Pacific
ADB & IFAD Funded Projects Review the progress of the collecting/ Manila, 10-15 21
Joint Annual Meeting for Asia conservation and multipurpose uses project Philippines July
and work plans 2000
International Coconut Review the progress of the project and work Chennai, 17-19 24
Genebank Workshop plans India July
2000
th
9 COGENT Steering Review the progress of COGENT and work Chennai, 20-22 24
Committee Meeting plans India July
2000
International Coconut Review the progress of the coconut genetic Chennai, 24-28 167
Conference resources and work plans India July
2000
CFC project workshop Review the progress of the multilocation Dar es 11-12 22
coconut hybrid trials project and work plans Salaam, Jun
Tanzania 2001
th
10 COGENT Steering Review the progress of COGENT and work Dar es 13-15 22
Committee meeting plans Salaam, Jun
Tanzania 2001
Poverty Reduction in Coconut Initial consultation on a proposed project Ho Chi Minh 25 25
Growing Communities, Project proposal City, Vietnam Feb-1
Inception and Stakeholders’ Mar
Meeting 2002
th
11 COGENT Steering Review the progress of COGENT and work Bangkok, 25-28 20
Committee meeting plans Thailand Jun
2002
CFC Mid Term Evaluation Review the mid-term progress of the CFC- Kingston, 25-27 15
Project Meeting funded project and work plans Jamaica July
2002
nd
2 International Coconut Review status of the ICGs and consultations Kasaragod, 30 31
Genebank (ICG) Meeting and on a proposed project proposal India Oct-1
Consultation on Proposed Nov
Globally Coordinated Coconut 2002
Breeding
nd
2 Annual ADB funded Project Review the progress of the poverty Davao, 21-23 80
Meeting reduction in coconut growing communities Philippines Aug
project and work plans 2003
th
12 COGENT Steering Review the progress of COGENT and work Merida, 10-12 16
Committee meeting plans Mexico Nov
2003
th
4 Annual CFC-funded project Review the progress of the CFC-funded Merida, 13-17 21
meeting: Coconut Germplasm project and work plans Mexico Nov
Utilization and Conservation to 2003
Promote Sustainable Coconut
Production
Poverty Reduction in Coconut Evaluate the progress and outputs of the Ho Chi Minh 27-30 24
Growing Communities project in eight Asia Pacific countries and City, Vietnam Sep
(PRCGC): The Final ADB discuss initial development impact and 2004
funded Project Meeting strategies for upscaling and replication
Final CFC funded Project Review the progress of the CFC-funded Kuala 17-19 26
Meeting multilocation coconut hybrid trials and other Lumpur, Nov
project components, and discuss the Malaysia 2004
findings on the final evaluation of the project
and issues and recommendations
13th COGENT Steering Review the progress of ongoing and Kuala 22-24 26
Committee Meeting proposed projects and activities of Lumpur, Nov
COGENT; status of PROCORD; finalize Malaysia 2004
COGENT’s Strategic Plan and refine
COGENT’s coconut conservation strategy
Subtotal for Workshops and Meetings 863
333
COCONUT GENETIC RESOURCES
Coconut micropropagation
C Oropeza1, E Rillo2, V Hocher3 and JL Verdeil4
1
Coconut Researcher, Centro de Investigación Científica de Yucatán (CICY), Mérida, México
2
Scientist, Philippine Coconut Authority - Albay Research Centre (PCA-ARC), Guinobatan,
Albay, Philippines
3
Scientist, L’Institut de Recherche pour le Développement (IRD), Montpellier, France
4
Researcher, Centre de Cooperation Internationale en Recherche Agronomique pour le
Developpement (CIRAD), Cedex 5, Montpellier, France
Introduction
The coconut palm (Cocos nucifera L.) is a very important crop providing
cash and subsistence to millions of smallholders in 86 countries where
about 12 million ha are planted with this palm (Santos 1999). However,
most coconut groves require replanting because of loss due either to palm
senescence or to diseases such as lethal yellowing in America (Arellano
and Oropeza 1995), the lethal diseases in Africa (Eden-Green 1995) and
cadang-cadang in Asia, in particular the Philippines (Hanold and Randles
1991). Research on genotype selection for disease resistance or other traits
of interest, such as high yield, are being carried out worldwide with
positive results (Santos 1999; Zizumbo et al. 1999). However, propagation
of selected genotypes, or even more conveniently, individuals within these
genotypes to satisfy the rapidly growing demands will be very hard to
fulfill through natural coconut propagation that occurs only sexually,
producing very few seeds per palm within its long life cycle. Therefore,
alternative approaches for rapid propagation of improved planting
materials must be considered. In this respect, in vitro cloning via somatic
embryogenesis seems to provide a convenient alternative for the future
due to its potential for massive propagation. Unfortunately, coconut is a
species that responds very poorly to in vitro culture, being one of the
most recalcitrant species to regenerate in vitro (George 1996). This paper
summarizes the efforts that have been carried out to develop protocols
for the micropropagation of coconut through somatic embryogenesis,
presenting the first work carried out during the 20th century and the
research advances obtained during the past five years. The paper focuses
particularly on research leading to sustained developments such as those
related to the use of inflorescence and embryo explants.
334
CHAPTER 5: Germplasm use
335
COCONUT GENETIC RESOURCES
336
CHAPTER 5: Germplasm use
337
COCONUT GENETIC RESOURCES
Recent advances
338
CHAPTER 5: Germplasm use
Genetic engineering
In addition, there are new areas of research intended to open new avenues
for coconut micropropagation improvement and probably applications.
These studies are based on molecular techniques and presented below.
339
COCONUT GENETIC RESOURCES
340
CHAPTER 5: Germplasm use
341
COCONUT GENETIC RESOURCES
Acknowledgement
The authors would like to thank GTZ, UE, CONACYT, UNESCO,
ACIAR, BUROTROP, COGENT and The French Ministry for Teaching
and Research for the funding and help in general provided to support
the research collaborative efforts reported here.
References
Adkins, SW, YM Samosir and ID Godwin. 1999. Control of environmental
conditions and the use of polyamines can optimize the conditions for
the initiation and proliferation of coconut (Cocos nucifera L) somatic
embryos. Pp 321-340. In: C Oropeza, JL Verdeil, GR Ashburner, R
Cardeña and J Santamaría (eds). Current advances in coconut
biotechnology. Kluwer Academic Publishers, Dordrecht, The
Netherlands.
Arellano, J and C Oropeza. 1995. Lethal yellowing. Pp 1-16. In: C
Oropeza, FW Howard and GR Ashburner (eds.) Lethal yellowing
research and practical aspects. Kluwer Academic Publishers,
Dordrecht, The Netherlands.
Azpeitia, A. 2003. Estudio de diferentes estrategias para promover la
embriogénesis somática en cocotero (Cocos nucifera L.) a partir de
explantes de plúmula. Centro de Investigación Científica de Yucatán
(CICY), Mérida, México. (Unpublished PhD thesis).
Azpeitia, A, JL Chan, L Sáenz and C Oropeza. 2003. Effect of 22(S),23(S)-
homobrassinolide on somatic embryogenesis in plumule explants of
Cocos nucifera (L.) cultured in vitro. J. Hort. Sci Biotech. 78:591-596.
Blake, J. 1990. Coconut (Cocos nucifera L.) micropropagation. Pp 538-
554. In: YPS Bajaj (ed). Biotechnology in agriculture and forestry,
342
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343
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344
CHAPTER 5: Germplasm use
345
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346
CHAPTER 5: Germplasm use
Chapter 6
Major pests and safe
movement of germplasm
347
COCONUT GENETIC RESOURCES
348
CHAPTER 6: Major pests and safe movement of germplasm
Introduction
Lethal yellowing (LY) is a devastating disease that affects more than 38
species of palms (Harrison et al. 1999) throughout the Caribbean Region
(see McCoy et al. 1983) where its effects have been more conspicuous on
coconut (Cocos nucifera L.) than other palm species because of their
abundance. In the last 50 years, LY epidemics in this region have killed
millions of palms. The purpose of this paper is to summarize the current
status of study and knowledge on LY. For more extensive treatment of
particular issues discussed in this section, the reader will be referred to
other related publications.
Geographic distribution
Reports of dying coconut palms exhibiting LY-type symptoms date back
to 19th century in the Caribbean region (Eden-Green 1997). During the
last three decades, epiphytotics of LY in Jamaica and Florida have been
characterized by rapid spread and high losses (McCoy et al. 1983). LY
was first recorded in the Yucatan Peninsula of southern Mexico during
1977 (Oropeza and Zizumbo 1997) and has since spread to Belize (Eden-
Green 1997), Honduras (Ashburner et al. 1996) and Guatemala (Mejía et
al. 2004). Similar diseases known as lethal yellowing-type diseases (LYD)
have also been described in Africa in Ghana, Togo, Nigeria, Cameroon,
Tanzania, Kenya and Mozambique (Eden-Green 1997; Tymon et al. 1998;
Eden-Green and Mpunami this volume). LY had destroyed millions of
palms causing great losses, particularly in Ghana and Tanzania (Schuiling
et al. 1992).
Symptoms
The first visual symptom of the disease on infected bearing coconut palms
is the premature drop of most of the fruit regardless of their
developmental stage. The next symptom to appear is the blackening of
new inflorescences. This symptom is most apparent as the inflorescence
emerges from the spathe. The first affected inflorescences usually show
partial necrosis but as the disease progresses, newer inflorescences show
more extensive necrosis. Most of the male flowers are dead and no fruit
are set on those affected inflorescences. Yellowing of the leaves usually
349
COCONUT GENETIC RESOURCES
starts after necrosis has developed in more than two inflorescences. The
pattern of leaf discoloration due to LY is more rapid than that for normal
leaf senescence. The first leaves to turn yellow are the oldest (lower) ones,
then yellowing advances upwards; affecting the younger middle and
finally the upper leaves. Yellow leaves turn brown, desiccate and die.
They remain hanging for a few days before falling. Eventually, the whole
crown perishes, leaving a bare trunk or ‘telephone pole’.
On the other hand, the syndrome does not always follow the same
sequence of events. In some LY affected palms the spear leaf or a
midcrown leaf occasionally shows yellowing prematurely (McCoy et al.
1983). Sometimes inflorescence necrosis becomes noticeable only after
leaf yellowing has appeared as observed in Guatemala (Mejia et al. 2004).
The estimated time lag from the probable time of initial infection by the
pathogen to the appearance of first symptom has been variously reported
as follows: in mature bearing palms, 230-450 days (Romney 1972) and
210-450 days (Heinze et al. 1972); for young non-bearing palms, at least
240-270 days (Dabek 1974). The time between probable initial infection
and death of mature palms has been reported as 3-6 months (Grylls and
Hunt 1971) or 4-5 months (McCoy 1973). In addition to these symptoms
in above ground parts, roots also show necrosis, which becomes more
extensive as the disease progresses (Eden-Green 1979). The growth is
also affected by LY. Detailed studies on LY affected coconut palms have
revealed physiological and biochemical symptoms (Oropeza et al. 1995;
Islas-Flores et al. 1999; Martínez et al. 2000; Maust et al. 2003). In general,
LY symptoms in other palms are similar but there are some differences
(see McCoy et al. 1983). Symptoms of coconuts affected by lethal
yellowing-like diseases (LYD) in West Africa and Tanzania are similar to
those described here for LY in the Americas (Mpunami et al. 1999).
Causal agent
Phytoplasmas (previously known as mycoplasma-like organisms or MLO)
were first found to be associated with some plant yellows diseases during
the 1960s (Doi et al. 1967; lshiie et al. 1967). These results then sparked
the search for phytoplasmas in LY-affected palms. In 1972, three groups
independently reported their occurrence in the phloem of coconut palms
showing LY symptoms (Beakbane et al. 1972; Heinze et al. 1972; Plavsic-
Banjac et al. 1972). A cause-effect relationship between phytoplasmas
and LY was supported by the differential response of LY diseased palms
to antibiotics. LY palms treated with penicillin showed no beneficial
response whereas symptom remission occurred when they were treated
with oxytetracycline (Hunt et al. 1974; McCoy 1972). Genotypic
characterization of coconut-infecting phytoplasmas was possible when
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CHAPTER 6: Major pests and safe movement of germplasm
Transmission
According to the pattern of spread of LY, it was first hypothesised that it
was probably transmitted by flying insects (Johnston 1912). When the
causal agent of LY was discovered to be a phytoplasma, the search
concentrated on species of Auchenorrhyncha, the sub-order of the
Homoptera to which most vectors of phytoplasma-associated diseases
belong (Tsai 1979). Surveys conducted in LY-affected areas in Jamaica
yielded five species of fulgorids (Schuiling 1976; Schuiling et al. 1976)
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COCONUT GENETIC RESOURCES
and in Florida two fulgorids and one membracid (Howard 1980a; Howard
and McCoy 1980; Howard and Mead 1980). The only common species
found in coconut palms in both locations was the cixiid Myndus crudus.
In addition, the apparent rate of spread of LY decreased in areas where
M. crudus populations were reduced by insecticide treatment (Howard
and McCoy 1980) and populations of M. crudus were 40 times higher in
heavily affected areas than in LY-free areas in Florida (Howard 1980b).
As a result of these reports, M. crudus has been extensively tested as a
vector for LY (Howard 1995). Successful transmission was achieved in
Florida using caged palms (C. nucifera, Veitchia merrillii and Pritchardia
thurstonii) exposed to large numbers of insects and long incubation times
(Howard et al. 1982; Howard and Thomas 1980; Howard et al. 1984).
Every month, approximately 850 wild M. crudus captured from landscape
palms were introduced into each cage over a 34-month period. Palms in
cages where insects were not introduced remained healthy. More recently,
detection by PCR of LY-phytoplasma infection on native M. crudus in
Florida was reported (Harrison and Oropeza 1997). Taken together, these
studies indicate the importance of this planthopper as a vector of LY in
Florida, but its role as a vector of the disease elsewhere in the Americas
remains uncertain. At LY-active sites in southern Mexico, the number of
M. crudus on coconut palms were found to be several-fold lower than
those of many other potential vectors (Escamilla et al. 1994).
The possibility of an indirect transmission path, through embryos or
asymptomatic alternative host plants, has been considered. DNA of the
LY phytoplasma has been detected in embryos from fruits of diseased
Atlantic Tall coconut palms by DNA hybridization (Cordova 1994), and
PCR analysis (Cordova et al. 2003). Phytoplasma distribution in sectioned
tissues from PCR-positive embryos determined by in situ PCR and
digoxigenin-11-deoxy-UTP (Dig) labelling of amplification products was
limited to areas corresponding to the plumule and cells ensheathing it
(Cordova et al. 2003). By comparison, similarly treated embryo sections
derived from fruits of a symptomless Atlantic Tall coconut palm were
consistently devoid of any label. Occurrence of LY phytoplasma DNA
has been shown most recently in embryos from fruits at different stages
of development (Chumba 2003). Presence of phytoplasma DNA in
coconut embryo tissues suggests a potential for seed transmission which
remains to be demonstrated. The palms Thrinax radiata and Cocothrinax
redii that have been listed as not susceptible by McCoy et al. (1983) and
were not listed as susceptible by Harrison et al. (1999) are very common
on the coastal areas of Yucatan where most of the coconut palms have
been killed by LY. Analysis by PCR with LY-specific, non-ribosomal
primers (Harrison et al. 1994a) of symptomless palms of these species
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Spread
Two types of spread of LY have been reported in Jamaica and Florida
(see McCoy et al. 1983). One involves a local centre of infection that
appears in one or two palms only, followed by new cases appearing at
random around the initial centre, thereby extending local spread. The
second type is a jump spread followed by local spread. The jump distance
varies from a few to 70 km or more (Carter, 1964). McCoy (1976) noted
that the rate of long distance spread of LY in Jamaica appeared to be
slower than in Florida. It took more than 60 years to cover the distance
between the west and east end of the island, whereas in Florida it jumped
from Miami to Palm Beach and Naples and to Nassau in the Bahamas
within three years. McCoy (1976) considered that the mountainous
terrain of Jamaica probably contributed to the slower rate of long distance
dispersal whereas Florida has no barriers to air-borne dispersal. In Mexico,
LY spread about 900 km westward from the Cozumel-Cancun area,
where it was first observed in 1979, to the Campeche-Tabasco border in
15 years (Escamilla et al. 1995). The account by McCoy (1976) of a survey
of LY spread in Dade County, where it first appeared in mainland Florida
in late 1971, illustrates patterns of spread for a locality. Of the estimated
original coconut palm population of 350 000, 0.015% of the palms were
already diseased when the survey began; 0.6% by the end of 1972; nearly
6% by autumn of 1973; 50% by the end of 1974; and 75% by the end of
1975. Regarding LY tree-to-tree spread, in Dade County in the first eight
months after arrival of the disease when only a small portion of the area
was affected, each infected palm served to inoculate an average of 4.6
new palms according to McCoy et al. (1983). Two years later, when the
logarithmic stage of spread was well underway, each infected palm
served to infect 9.3 new palms. The author considered this increase as a
result of the greater availability of inoculum in relation to the remaining
uninfected palms. The type of locality was also found to affect the rate of
the spread of LY. The highest rate was found in inland groups of palms
receiving regular irrigation and fertilization; the lowest rate occurred
adjacent to the ocean, even with high maintenance; and intermediate
rates in inland sites receiving minimal maintenance (McCoy 1976).
Studies carried out in Yucatan determined the LY spread gradients
within a coconut grove and between coconut groves, as well as the palm
to palm spread pattern. It was found that within a grove as the LY
incidence or proportion of infected palms in an outbreak grows, the
greater is the distance the disease spreads from the outbreak; and that it
does so as a symmetrical radial gradient (Gongora et al. 2001). For longer
distances, dispersal between groves gradients were asymmetrical and
depended on the prevailing wind direction. Since the prevailing direction
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CHAPTER 6: Major pests and safe movement of germplasm
Control methods
Despite decades of research, a cure for LY is not yet available, but measures
may be taken to attempt to reduce its rate of spread. Current and potential
methods include quarantine, chemotherapy, vector control, sanitation
and the use of resistant varieties. Control of the vector has been
approached using insecticides. In tests carried out by Howard and McCoy
(1980), and Reinert (1977), M. crudus populations were reduced by
insecticide treatment, but not sufficiently to be recommended for practical
purposes (McCoy et al. 1983). Due to the phytoplasma nature of the causal
agent of LY, antibiotics were tested in Florida (see McCoy et al. 1983)
and Jamaica (Hunt et al. 1974). It was found that tetracycline group
antibiotics suppressed symptom development if applied before expression
of systemic foliar yellowing. Chemotherapy has been successfully used
for treating host palms used for ornamental purposes, but is not feasible
for commercial plantations because of its high cost and perceived health
risks. According to McCoy et al. (1983), eradication of diseased palms
could be useful in slowing the spread of LY if practised in the early stages
of the outbreak. He noted that a major drawback of this practise is that
LY has a long latent period. However, according to the current
epidemiological knowledge for LY as commented in the previous section,
if eradication is rigorously practised very early when an outbreak starts,
its contribution to delaying disease spread could be substantial. On the
other hand, although LY spreads rapidly in any locality where it has
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COCONUT GENETIC RESOURCES
Conclusion
Despite decades of efforts to deal with LY and LYD, these diseases are
still spreading and killing palms in the Americas and Africa. In the past
50 years, LY has moved to Mexico, Belize, Guatemala and Honduras.
New outbreaks in Jamaica, in particular, are very worrisome because
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Acknowledgement
The authors would like to thank CONACYT- SISIERRA, Mexico for the
partial funding of the research presented here.
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COCONUT GENETIC RESOURCES
References
Ashburner, GR, II Cordova, C Oropeza, R Illingworth and NA Harrison.
1996. First report of coconut lethal yellowing disease in Honduras.
Plant Disease 80:960.
Baudouin, L and P Lebrun. 2002. The development of a microsatellite kit
and dedicated software for use with coconuts. BuroTrop Bulletin
17:16-20
Beakbane, AB, CHW Slater and AF Posnette. 1972. Mycoplasmas in the
phloem of coconut, Cocos nucifera L., with lethal yellowing disease.
Journal of Horticultural Science 47:265.
Been, BO. 1991. Observations on field resistance to lethal yellowing in
coconut varieties and hybrids in Jamaica. Oléagineux 36:9-11.
Canché, J. 2002. Determinación del período de incubación del
Amarillamiento Letal del cocotero (Cocos nucifera L) en Sisal, Yucatán
[Determination of the lethal yellowing incubation period in coconut
(Cocos nucifera L) in Sisal, Yucatán]. BSc thesis. Instituto Tecnológico.
Agropecuario No. 2, Condal, México / Centro de Investigación
Científica de Yucatán (CICY), Mérida, México.
Carter, W. 1964. Present status of research of lethal yellowing disease of
coconut palm in Jamaica. FAO Plant Protect Bulletin 12:67-69.
Chumba, A. 2003. Estudio de la transmisión del amarillamiento lethal
del cocotero (Cocos nucifera L.) a través del embrión [Study of lethal
yellowing transmisión through coconut embryos]. BSc thesis.
Universidad Autónoma de Yucatán, Mérida, México/Centro de
Investigación Científica de Yucatán (CICY), Mérida, México.
Cordova, I. 1994. Evaluación de la presencia del organismo tipo
micoplasma causante del amarillamiento lethal en embriones de
semillas de palmas de cocotero afectadas por esta enfermedad
[Evaluation of the presence of the lethal yellowing mycoplasma-like
organisms in embryos of nuts from diseased palms]. BSc thesis.
Universidad Autónoma de Yucatán, Mérida, México/Centro de
Investigación Científica de Yucatán (CICY), Mérida, México.
Cordova, I. 2000. Estudio sobre el fitoplasma causante del amarillamiento
letal en el cocotero mediante el uso de la reacción en cadena de la
polimerasa [Studies of the lethal yellowing phytoplasmas using the
polymerase chain reaction test]. MSc thesis. Centro de Investigación
Científica de Yucatán (CICY), Mérida, México.
Cordova, I, P Jones, NA Harrison and C Oropeza. 2003. In situ PCR
detection of phytoplasma DNA in embryos from coconut palms with
lethal yellowing disease. Molecular Plant Pathology 4:99-108.
Dery, SK and R Philippe. 1997. Preliminary study on the epidemiology
of cape St. Paul wilt disease of coconut in Ghana. Pp 255-260. In: SJ
358
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COCONUT GENETIC RESOURCES
Querétaro, México.
Grylls, NE and P Hunt. 1971. A review of the study of the aetiology of
coconut lethal yellowing disease. Oléagineux 26:311-315.
Harrison, N and C Oropeza. 1997. Recent advances in diagnosis and
detection of lethal yellowing in the Americas. Pp 221-234. In: SJ Eden-
Green and F Ofori (eds). Proceedings of the International Workshop
on Lethal Yellowing-like Diseases of Coconut, Elmina, Ghana,
November 1995. Natural Resources Institute, Chatham, UK.
Harrison, NA, CM Bourne, RL Cox, JH Tsai and PA Richardson. 1992.
DNA probes for detection of the mycoplasmalike organisms associated
with lethal yellowing disease of palms in Florida. Phytopathology
82:216-224.
Harrison, NA, PA Richardson, P Jones, AM Tymon, SJ Eden-Green and
AA Mpunami. 1994a. Comparative investigation of MLOs associated
with Caribbean and African coconut lethal decline diseases by DNA
hybridization and PCR assays. Plant Dis. 78:507-511.
Harrison, NA, PA Richardson, JB Kramer and JH Tsai. 1994b. Detection
of the mycoplasma-like organism associated with lethal yellowing
disease of palms in Florida by polymerase chain reaction. Plant
Pathology 43:998-1008.
Harrison, NA, I Cordova, P Richardson and R Dibonito. 1999. Detection
and diagnosis of lethal yellowing. Pp. 183-196. In: C Oropeza, JL
Verdeil, GR Ashburner, R Cardeña and JM Santamaria (eds). Current
advances in coconut biotechnology. Kluwer Academic Publishers,
Dordrecht. The Netherlands.
Harrison, NA, M Narváez, H Almeyda, I Cordova, ML Carpio and C
Oropeza. 2002a. First report of group 16 SrIV phytoplasmas infecting
coconut palms with leaf yellowing symptoms on the Pacific coast of
México. New Disease Reporter 5:1-2.
Harrison, NA, W Myrie, P Jones, ML Carpio, MM Castillo, MM Doyle
and C Oropeza. 2002b. 16s rRNA interoperon sequence heterogeneity
distinguishes strain populations of palm lethal yellowing phytoplasma
in the Caribbean region. Annals of Applied Biology 141:183-193.
Heinze, KG, M Schuiling, DH Romney. 1972. The possible cause of lethal
yellowing disease of coconut. FAO Plant Protection Bulletin 20:58-
68.
Howard, FW. 1980a. Attractiveness of date and coconut palms to Myndus
crudus and other homopterans. Proceedings of the Florida State
Horticultural Society 93:199-201.
Howard, FW. 1980b. Population densities of Myndus crudus Van Duzee
(Homoptera: Cixciidae) in relation to coconut lethal yellowing
distribution in Florida. Principes 24:174-178.
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Jamaica
Introduction
Lethal yellowing disease (LY), probably the most devastating of diseases
which affect the coconut palm (Cocos nucifera L.), is one of the greatest
threats to coconut cultivation not only in the Caribbean and the Americas
but worldwide. It is associated with phytoplasmas, and Myndus crudus
Van Duzee is a probable vector (Beakbane et al. 1972; Plavsic-Banjac et al.
1972; Howard et al. 1983).
Despite the considerable research, which has been carried out on the
disease, no permanent cure has yet been found.
History of LY in Jamaica
LY was first reported from the Cayman Islands in 1834. In Jamaica, the
disease was first observed in the south western section of the island in
1884 (Fawcett 1891). Nevertheless, it is possible that in 1872 it, or a similar
disease, wiped out coconut palms along a forty-mile coastal strip in the
south west. The disease continued to be endemic in the western region
for decades and by 1952 had spread over the western half of the island
(Martyn 1949; Nutman and Roberts 1955). The greatest damage was
done in the coconut belt bordering the north west coast but the disease
was not found a few miles inland, but there were not many plantations
inland in that area.
In 1961, LY appeared suddenly in the north eastern section of the
island, over 100 km from the nearest case in the west, and subsequently
spread rapidly throughout the main coconut growing region destroying
existing coconut plantations. Of the estimated six million coconut palms
growing in Jamaica in 1961, 90% was lost to LY by 1981.
By 1981 when LY was active island wide, mortality levels of the
Malayan Dwarf and Maypan were 5% and 10%, respectively (Been 1981).
During the early 1980s, LY was largely confined to surviving Jamaica
Tall palms and materials of uncertain origin. About the mid-1980s, at
certain coastal locations in the north western region there were reports
of higher than anticipated levels of LY mortality among Malayan Dwarf
and Maypan populations. At some places mortalities were as high as
40%.
Following a disastrous hurricane in 1988 the incidence of LY increased
significantly and new outbreaks were reported in eastern Jamaica. At
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various points along the coastal areas of the northern region mortality
levels among stands of the Malayan Dwarf and Maypan were found to
be consistently higher than those observed in 1981. The trend continued
during the 1990s and in certain places the disease began to move inland.
The mortality level varies; in the western section it is generally lower
than in the east where a field of 747 Malayan Dwarfs died over the period
1993 to 1999, and a population of 792 Maypan hybrids between 1997
and 2000 (Myrie 2002). In the western section, mortality rate is generally
slower, about 2% per annum, than in the east, which is about 14-25%
per annum (Myrie 2002).
The LY disease of the 1990s had the usual characteristics of the LY of
the 1970s; however, there was an interesting difference in that it attacked
non-bearing palms with greater frequency.
At present, the disease is largely confined to the coastal areas and its
incidence on most of the inland farms is low. The main germplasm
collections having survived LY of the 1960s and 1970s are still to be
exposed fully to the ‘new’ LY. However, to date no variety currently
being cultivated in the areas where the disease is active has shown any
sign of possessing a high or any level of resistance. At two experimental
sites, the following F1 hybrids – Indian Green Dwarf x Panama Tall,
Ceylon Green Dwarf x Panama Tall, Ceylon Yellow Dwarf x Panama
Tall and Maypan – have all failed to stand up to the disease (Wallace
2002). Indian Green and Ceylon Yellow and Green Dwarfs had shown
high levels of LY resistance, almost as high as that of the Malayan Dwarf.
It has been estimated that over the past decade about 800 000 palms
have been destroyed by LY in the eastern section of the island and the
disease continues its advance.
The coconut is not indigenous to Jamaica and when LY first appeared
in the 18th century, the Jamaica Tall was the principal variety being
cultivated – a situation, which remained unchanged until the 1970’s.
Unfortunately, it is highly susceptible to the disease. There is no record
of LY affecting other palm species in Jamaica during the 18th century.
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CHAPTER 6: Major pests and safe movement of germplasm
At present, the CIB does not have any variety which has proven resistance
to the LY of the 1990s, but seedlings of the Maypan and Malayan Dwarf
are being made available to farmers free or at subsidized prices. Farmers
are given regular updates of the disease situation and told that it might
not be advisable to replant until disease activity in their areas has abated.
The answer to LY may well lie in the realm of genetic engineering
but, in the meantime, conventional methods of plant breeding will have
to be used and every effort made to develop an integrated approach to
disease control.
References
Beakbane, AB, CHW Slater and AF Posnette. 1972. Mycoplasma in the
phloem of coconuts, Cocos nucifera L., with lethal yellowing disease.
Journal of Horticultural Science 47: 265.
Been, BO. 1980. Observations on field resistance to lethal yellowing in
Jamaica. Oléagineux 36:9-11.
Bruner, SC and L Boucle. 1943. La enfermedad conocida como
“enfermedad del cogollo del cocotero Cuba.” Rev. Agric. Cuba 26:132-
141.
Carter, W. 1966. Lethal yellowing disease of coconuts (Report to Govt.
of Jamaica). FAO Rome, TA 2158.
Fawcett, W. 1891. Report on the coconut disease of Montego Bay. Bulletin
of the Botany Department Jamaica 23:2.
Grylls, NE, P Hunt and NA Bor. 1968. Investigations on the aetiology of
lethal yellowing disease of coconuts in Jamaica 1. Preliminary results
of virus transmission tests and bacterial inoculations. Pp. 15-20. In:
Proceedings of the 3rd Session of the FAO TWP on Coconut
Production and Processing, Indonesia. Jakarta, Indonesia.
Heinze, KG. 1971. Report to the Government of Jamaica and to FAO on
lethal yellowing disease of coconut.
Howard, FW, RC Norris and DL Thomas. 1983. Evidence of transmission
of palm lethal yellowing agent by a plant hopper Myndus crudus
(Homoptera: Cixildae). Tropical Agriculture 60: 168-171.
Martyn, EB. 1949. Further observations on the “unknown” disease of
coconuts. Tropical Agriculture (Trinidad) 26:110-112.
Myrie, WA. 2002. Current outbreaks of lethal yellowing in Jamaica and
the use of molecular diagnostic techniques in phytoplasma detection.
Pp 107-115. In: Proceedings of the expert consultation on sustainable
coconut production through control of lethal yellowing disease. CFC
Technical Paper No. 18. Amsterdam, The Netherlands.
McKoy, RE, FW Howard, JH Tsai, HM Donzleman, DL Thomas, HG
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Introduction
Safe movement means movement of coconut germplasm without
introducing pests (taken here to include diseases), or at least those pests
for which there are perceived risks of harmful or undesirable effects
following introduction to a previously unaffected region. This section is
concerned primarily with pests of quarantine significance (mostly
diseases) that are likely to be spread through planting materials derived
directly from parent plants which appear to be healthy to the naked eye
but might be infected without showing symptoms. These include several
intractable and lethal diseases which are difficult to diagnose or
characterize; some of unknown or uncertain aetiology. Detection of the
causal agents may require the use of laboratory diagnostic tests or indexing
either of the planting material itself or of the parent population from
which it is derived. As yet, most lethal diseases have a limited geographic
distribution although different strains of the pathogen may be present
both within and between regions that are considered to be affected by
the same disease. This emphasises the need for careful and responsible
attention to phytosanitary issues when moving germplasm and, in
particular, for robust and sensitive diagnostic techniques and accurate
characterization procedures to distinguish between strains that could be
spread in planting materials.
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Phytoplasma diseases
Phytoplasmas (formerly known as mycoplasma-like organisms, MLO)
have been associated with diseases of coconut and certain other palms
in most of the continental coconut growing regions. Lethal yellowing
(LY) was originally recognised over 100 years ago in the northern
Caribbean (Jamaica, Cayman, Cuba, Hispaniola and southern Bahamas)
but is now present in southeastern USA (Florida, Texas), Mexico, Belize
and Honduras. Similar lethal yellowing-like diseases (LYD) have been
reported from Africa since the early 1900s where they have become known
by various local names: Cape St Paul wilt disease (CSPWD) in Ghana,
Kaincopé disease in Togo, Awka or bronze leaf wilt in Nigeria, Kribi
disease in Cameroon, lethal disease in Tanzania, Kenya and Mozambique
(Eden-Green 1997a). All of these show symptoms similar to LY.
In Asia, phytoplasmas have recently been detected in coconut palms
affected by lethal diseases, but not in symptomless palms, particularly in
Indonesia (Kalimantan wilt in Central Kalimantan, Natuna wilt in
Natuna Islands) (Allorerung et al. 1999). Some of the symptoms of these
conditions differ from those of LY and LYD but resemble those reported
elsewhere in Southeast Asia (Sumatra, Malaysia, Socorro wilt in the
Philippines). All of these diseases may prove to have similar phytoplasma
aetiology (Eden-Green 1997b). In India, electron microscope observations
showed of an association of phytoplasmas with coconut root wilt and
Tatipaka wilt diseases, and application of tetracycline antibiotics
reportedly caused remission of root (wilt) symptoms (Solomon 1997).
However, attempts to confirm the presence of phytoplasmas by PCR have
not been successful (Harrison and Jones 2003). In West Africa,
phytoplasmas have also been implicated in a blast disease of seedling
coconut palms that appears to have no association with LYD (Julia 1979).
Earlier diagnoses were based on electron microscope examination of
ultrathin sections, supported by observation of remission of symptoms
following application of tetracycline antibiotics. These remain as valuable
diagnostic tools but molecular methods, based on PCR amplification of
DNA with specific primers and characterization of the products, now
provide more practical and sensitive means to detect the pathogen. These
techniques have revealed a considerable genetic diversity of putative
strains of phytoplasmas that has not yet been related to phenotypic
characteristics. However, differences in the field susceptibility of coconut
varieties to diseases in different regions have been known for some time,
suggesting that these genetic differences may be of quarantine
significance.
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COCONUT GENETIC RESOURCES
(Gundersen and Lee 1996) in the second reaction is used for routine
detection of the LYD phytoplasma in Tanzania. The PCR assays have
been particularly useful for determining the genetic relationships between
the LYD isolates from East and West Africa, and their relationship to the
LY phytoplasma. By analyzing the restriction fragment polymorphisms
of amplified PCR products, it has been shown that the isolates from West
Africa are similar but genetically different from those causing disease in
East Africa and the Caribbean region (Harrison et al. 1994b; Tymon et al.
1998). The technique has also demonstrated that the LYD strains in Ghana
and Nigeria are genetically identical, but different though similar to the
LYD strains in East Africa (Tymon et al. 1997). The Caribbean diseases
appear to exist as a group of closely related strains that are most closely
related to a phytoplasma associated with declines of coconut and
Carludovica palmata in southern Mexico (Cordova et al. 2000) and Phoenix
canariensis in Texas (Harrison et al. 2002). The relationship of
phytoplasmas recently associated with Porroca disease in southern
Panama and northern Colombia (http://review.ucsc.edu/winter-03/
panamas.html) has not yet been reported.
The significance of these techniques lies in the ability to determine for
what materials, and between which countries there are potential
quarantine risks and, potentially, to assess whether host resistance
observed in one region is likely transferable to another. Sensitive detection
procedures also provide a means to monitor the persistence of the
presumed pathogen in seedlings derived from diseased palms to resolve
the question of whether or not there is a risk of spread of the disease in
seednuts. As knowledge on the variability and distribution of LYD
phytoplasma strains improves, it should become possible to base
quarantine decisions on the local strains present and to facilitate safe
movement of germplasm between regions affected by the same strains,
avoiding the need for decentralised diagnostic facilities within importing
countries. However, recent experience in Jamaica suggests that new
strains of the pathogen can arise that are able to invade previously-
resistant hosts, and molecular characterization tests do not yet allow
strains to be differentiated on the basis of host specificity.
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several regions and the suspected insect vectors have not been confirmed.
One of the biggest uncertainties is whether seed transmission is possible.
Available (and largely circumstantial) evidence suggests that if this can
occur at all then it is extremely rare, and provided the recommended
guidelines are observed then any risk should be eliminated. However,
recent reports of persistence of phytoplasmas, or at least phytoplasma
DNA, in coconut embryos collected from diseased palms make this an
important topic for research.
Indexing
The MRD can be used as an indicator plant as it is highly susceptible to
CFD and shows characteristic symptoms. However, detection and
diagnosis are usually based on detection and partial characterization of
viral ssDNA by gel electrophoresis, cDNA probes or DNA amplification
and sequencing. The CFD virus ssDNA has characteristically low
electrophoretic mobility in 5% polyacrylamide gels (PAGE) (Randles et
al. 1986) and migrates as a single band in denaturing polyacrylamide
gels, but generally as two bands in non-denaturing gels (Randles et al.
1987). A two-dimensional PAGE technique has been used to show that
the DNA molecules are circular in nature (Randles et al. 1987). PAGE
analysis provides presumptive diagnosis but confirmation requires DNA
hybridization and/or sequencing.
Pathogen characterization
Purification by isopycnic density gradient centrifugation [30%–60%
Nycodenz (Nyegaard, Oslo) gradient] results in the co-purification of
CFD-associated DNA (CFDV DNA) and unusual, 20 nm, icosahedral
particles (Nycodenz density range 1.27–1.30 g ml- -1 ), which are
considered to be coconut foliar decay virus (CFDV) particles (Randles
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COCONUT GENETIC RESOURCES
and Hanold 1989). Both CFD DNA and the particles occur in very low
amounts in diseased coconut palms. Although the DNA sedimentation
coefficient is only 12S to 15S, the virus has been placed in the geminivirus
group. Geminiviruses have ssDNA (s20,w = 16S at pH 7.0) and contain
either 1 or 2 circular ssDNA molecules of approximately 7–8 × 105 daltons
mol. wt, comprising about 2700 nucleotides (Harrison 1985). Examination
of purified extracts from CFD-infected palms by transmission electron
microscopy shows circular molecules with mean molecular weight of
approx. 4.3 × 105 daltons.
A molecular hybridization assay has been developed using a P32-
labelled cDNA probe synthesized from a 1203 bp DNA fragment,
amplified by PCR from circular, single-stranded, 1291-nucleotide CFDV
DNA (Rohde et al. 1990; Randles et al. 1992). The high specificity and
sensitivity of this assay allows CFDV DNA to be detected reliably, despite
its low concentration in coconut tissue. A non-radioactive probe using
digoxygenin (DIG)- labelled complementary RNA (cRNA) has also been
developed as an alternative detection method (Hanold and Randles
1997). Hybridization assays have been useful in studying the distribution
of CFDV DNA in palm tissue in order to establish priority areas for disease
diagnosis, for localization of the virus in phloem tissues (Randles et al.
1992; Hanold and Randles 1997), and for detection of the virus in the
vector.
To obtain sequence data on CFDV DNA, a single-stranded (ss),
circular, covalently closed (ccc) DNA associated with coconut foliar decay
virus (CFDV) was purified, amplified by PCR and subcloned. Its sequence
was established by analysis of overlapping subgenomic cDNA clones
(Rohde et al. 1990). The complete sequence comprised 1291 nucleotides
and contained open reading frames for six proteins of molecular weight
larger than 5 kDa.
CFDV can be detected in coconut embryos and husks but not in pollen
(Hanold and Randles 1997) emphasizing the need for efficient indexing
of mother palms including the use of positive controls to confirm the
reliability of diagnostic techniques. This is especially important given that
the Vanuatu Tall, some of its hybrids and possibly other varieties are
highly tolerant and can be infected without showing symptoms.
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collected from infected palms indicates that the risk of spread by this
means needs to be investigated more intensively.
Indexing
Cadang-cadang symptoms are not reliable means of detection and
diagnosis owing to the ease with which they may be confused with the
effects of other biotic and abiotic factors including diseases, pests,
nutritional deficiencies, typhoons and lightning strikes. Although the
disease can be mechanically transmitted to healthy coconut and other
test plants (Imperial et al. 1985), indexing is impractical because the latent
period between infection and appearance of symptoms is well over a
year and symptoms, particularly in pre-bearing palms, tend to be non-
specific. Pathogen detection and characterization by biochemical and
molecular properties are thus of greatest significance for disease diagnosis
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Pathogen characterization
Viroid purification
Viroids are the smallest known plant pathogens; and each consists solely
of a small, circular, single-stranded, naked RNA molecule, which is
infectious, and can replicate in the host cell and be transmitted
independently of any other microorganism (Diener 1987). Reliable
diagnosis is based on identifying the viroid RNA in extracts of coconut
palms. Single-stranded RNA is very susceptible to degradation by
ribonuclease, thus extraction from plant tissue involves the use of
inhibitors such as phenol and SDS to minimize the risk of enzymatic
degradation and antioxidants to prevent oxidation. The crude extract is
then deproteinised, and viroid RNA precipitated with polyethylene glycol
(PEG, mol. wt 6000). The resulting partially purified extract is ready for
analysis by gel electrophoresis, or further purification by density gradient
centrifugation (Hanold and Randles 1997).
Gel electrophoresis
Viroids migrate in most gel systems with a mobility less than that expected
for their molecular weight. Various forms of CCCVd, which differ in
size, are normally resolved in 5-20% polyacrylamide gels (Hanold and
Randles 1997). Viroid bands are then visualized in the gel slab after
staining with an appropriate stain such as silver, ethidium bromide, or
toluidine blue. Increasing the temperature or pH of the gel buffer creates
denaturing conditions, and causes viroids to denature from their native
rod-like state to open circles and migrate more slowly than their linear
forms. Diagnostic tests for viroids have been based on PAGE under both
non-denaturing and denaturing conditions, and on the characteristic
change of behaviour of these molecules when subjected to both sets of
conditions. For example, in two-dimensional PAGE, transfer from a non-
denaturing gel to denaturing conditions permits screening for all possible
viroids. If used in conjunction with silver staining or molecular
hybridization, the two-dimensional PAGE system is a sensitive and
definitive test for the presence of small, circular nucleic acids in a
preparation, and is thus a powerful tool in the detection of viroids (Hanold
and Randles 1997). The procedure is however, lengthy and cannot be
used on a routine basis.
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Molecular hybridization
After fractionation through PAGE, viroid bands on the gel slab are
transferred onto a hybridization membrane and detected by molecular
hybridization to a cDNA or cRNA probe (Hanold and Randles 1997).
The technique is very sensitive and specific for viroid detection; cRNA
probes are preferable to cDNA probes because they bind more strongly
to the target RNA, giving stronger signals and thus allowing conditions
of higher stringency for hybridization and reduce the non-specific binding
of the probe.
Electron microscopy
Electron microscopy of purified samples spread under denaturing
conditions can be used to identify circular viroid molecules and estimate
their size (Randles and Hatta 1979). It cannot, however, be used for
diagnostic purposes on tissue sections or crude extracts, since the small
viroid rods and circles cannot be positively identified when mixed with
other nucleic acids.
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Indexing
Symptoms usually start with yellowing or bronzing of the oldest leaves,
loss of immature nuts and blackening of newly opened inflorescences
and thus can easily be confused with those of lethal yellowing. However,
the presence of the flagellates, which are 12-27µm x 1-1.5µm, can usually
be confirmed in sap expressed from inflorescences or roots examined by
light microscopy using phase contrast, dark field or after staining with
Giemsa or toluidine blue (Waters 1978). All the coconut varieties that
have so far been tested were susceptible to the disease, and other palms
including Bentinckia nicobarica, Elaeis oleifera, E. guineensis, Maximiliana
maripa and Roystonia regia may serve as alternative hosts (Dollet 1984;
Kastelein and Parsadi 1986). The Phytomonas associated with Hartrot
can be transmitted by pentatomid bugs of the genera Lincus and Ochlerus
(Desmier de Chenon 1984; Dollet 1984) and these are thought to be the
natural vectors of the disease.
Pathogen characterization
Although there are very few instances of protozoa being implicated in
plant disease, Phytomonas have long been recognised as apparently
harmless parasites of latex cells in laticiferous plants especially in the
plant families Euphorbiaceae and Asclepiadaceae. Those associated with
and thought to cause disease in coconut and oil palm have been described
381
COCONUT GENETIC RESOURCES
382
CHAPTER 6: Major pests and safe movement of germplasm
Conclusion
Perhaps the biggest threat to the safe movement of coconut germplasm
remains from diseases of as yet unknown or uncertain aetiology, or
perhaps not yet recognised as infectious conditions at all. The aetiology
of several diseases on the Indian subcontinent remains uncertain or
unconfirmed: root wilt and Tatipaka on the west and east coasts of India;
leaf scorch decline and premature decline in Sri Lanka. Information on
transmission of these diseases through seednuts, embryos or pollen is
sorely lacking and experimental investigations are hampered by the lack
of reliable diagnostic methods and the obvious difficulties in carrying
out large-scale, long-term empirical testing by direct observations on
progenies and crosses from diseased palms. Elsewhere, there are several
instances where ‘new’ diseases, either previously unrecognised or of only
minor local importance, have emerged following the introduction of exotic
coconut varieties to new regions. Budrot and premature nutfall cased by
Phytophthora palmivora were recognised as only minor problems in
indigenous varieties grown in north Sulawesi, Indonesia, but caused
widespread losses following the large-scale introduction of exotic Malayan
Dwarf x West Africa Tall hybrids in the 1980s. Outbreaks of so-called
coconut stem necrosis were also associated with the introduction of exotic
varieties in Indonesia (Turner et al. 1979) and the emergence of foliar
decay virus as a problem in cultivars introduced to Vanuatu as referred
to earlier. In South America, lethal diseases of unknown aetiology, the
so-called spear rot-bud rot complex, affect oil palm in several countries
(de Franqueville 2002). It is possible that these diseases will affect coconut,
emphasizing the need for caution when considering the movement of
coconut germplasm.
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COCONUT GENETIC RESOURCES
References
Allorerung, D, HC Harries, P Jones and JS Warokka. 1999. Proceedings
of the Workshop on Lethal Diseases of Coconut caused by
Phytoplasma and their Importance in Southeast Asia. Manado,
Indonesia, 16-17 February 1998. APCC, Jakarta, Indonesia.
Boccardo, G. 1985. Viroid etiology of tinangaja and its relationship with
cadang-cadang disease of coconut. Pp. 75-99. In: K Maramorosch
and JJ McKelvey, Jr (eds). Subviral pathogens of plants and animals:
Viroids and prions. Academic Press, New York, USA.
Boccardo, G, RG Beaver, JW Randles and JS Imperial. 1981. Tinangaja
and bristle top, coconut diseases of uncertain etiology in Guam and
their relationship to cadang-cadang disease of coconut in the
Philippines. Phytopathology 71: 1104–1107.
Calvez, C, JL Renard and G Marty. 1980. Tolerance of the hybrid coconut
Local × Rennell to New Hebrides disease. Oléagineux 35: 443–51.
CFC. 2002. Proceedings of the Expert Consultation on Sustainable
Coconut Production through Control of Lethal Yellowing Disease,
Kingston, Jamaica, 14-18 January 2002. CFC Technical Paper No.
18. Common Fund for Commodities, Amsterdam, the Netherlands.
Cordova, I, C Oropeza, H Almeyda and NA Harrison. 2000. First report
of a phytoplasma-associated leaf yellowing syndrome of palma jipi
plants in southern Mexico. Plant Disease 84:807.
Deng, S and C Hiruki. 1991. Genetic relatedness between two
nonculturable MLOs revealed by nucleic acid hybridization and
polymerase chain reaction. Phytopathology 81: 1475-1479.
Desmier de Chenon, R. 1984. Research on the genus Lincus Stål,
Hemiptera: Pentatomidae Discocephalinae, and its possible role in
the transmission of marchitez of oil palm and hart rot of coconut.
Oléagineux 39: 1-4.
Diener, TO. 1987. Biological properties. Pp 9-35. In: TO Diener (ed). The
viroids. Plenum Press, New York, USA.
Dollet, M. 1984. Plant diseases caused by flagellate protozoa (Phytomonas).
Annual Review of Phytopathology 22:115-132.
Eden-Green, SJ. 1997a. History, world distribution and present status of
lethal-yellowing-like diseases of palms. Pp 9 -25. In: SJ Eden-Green
and F Ofori (eds). Proceedings of an International Workshop on Lethal
Yellowing-Like Diseases of Coconut, Elmina, Ghana, November 1995.
Natural Resources Institute, Chatham, UK.
Eden-Green, SJ. 1997b. An updated survey of coconut diseases of
uncertain aetiology. Pp 77-84. In: SJ Eden-Green and F Ofori (eds).
Proceedings of an International Workshop on Lethal Yellowing-Like
Diseases of Coconut, Elmina, Ghana, November 1995. Natural
384
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385
COCONUT GENETIC RESOURCES
386
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510.
Marche, S, C Roth, H Phillipe, M Dollet and T Baltz. 1995.
Characterization and detection of plant trypanosomatids by sequence
analysis of the small subunit ribosomal RNA gene. Molecular and
Chemical Parasitology 71: 15-26.
McGhee, RB and AH McGhee. 1979. Biology and structure of Phytomonas
staheli sp. n., a trypanosomatid located in sieve tubes of coconut and
oil palms. Journal of Protozoology 26:348-351.
Mohamed, NA, RM Bautista, GG Buenaflor and JS Imperial. 1985.
Purification and infectivity of the coconut cadang-cadang viroid.
Phytopathology 75: 79–84.
Mpunami, AA. 1997. Molecular methods for detecting the coconut lethal
disease (LD) phytoplasma in Tanzania. University of Nottingham,
U.K., 222 pp. (Unpublished PhD thesis).
Mpunami, AA, P Jones, M Dickinson, A Tymon and NA Harrison. 1997.
Detection of coconut lethal disease in Tanzania by use of DNA probes
and PCR. Pp. 205-218. In: SJ Eden-Green and F Ofori (eds). Proceedings
of an International Workshop on Lethal Yellowing-Like Diseases of
Coconut. Elmina, Ghana, November 1995. Natural Resources
Institute, Chatham, UK.
Mpunami, AA, AM Tymon, P Jones and MJ Dickinson. 1999 Genetic
diversity in the coconut lethal yellowing disease phytoplasmas of East
Africa. Plant Pathology 48: 109-114.
Mpunami, AA, AM Tymon, P Jones and MJ Dickinson. 2000.
Identification of potential vectors of the coconut lethal disease
phytoplasma. Plant Pathology 49: 355-361.
Muller, E, JC Ahomadegbe, D Coulaud, D Gargani, C Fernandez-Becerra
and M Dollet. 1995. Variability in kinetoplast DNA from plant
trypanosomatids responsible for hartrot and marchitez diseases.
Phytopathology 85: 942-947.
Namba, S, H Oyaizu, S Kato, S Iwanami and T Tsuchizaki. 1993.
Phylogenetic diversity of phytopathogenic MLOs. International
Journal of Systemic Bacteriology 43: 461-467.
Nanden-Amattaram, TL and M Parsadi-Sewkaransing. 1989. Some
preliminary observations on the occurrence of Phytomonas flagellates
in coconuts from coconut palm (Cocos nucifera L.) infected by ‘hartrot’
disease in Suriname. Surinaamse Landbouw 37:14-20.
Ohler, JG. 1999. Diseases. Pp. 69-99. In: JG Ohler (ed). Modern coconut
management. Intermediate Technology Publications Ltd., London,
UK.
Parthasarathy, MV, WG van Slobbe and C Soudant. 1976.
Trypanosomatid flagellate in the phloem of diseased coconut palms.
387
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388
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389
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390
CHAPTER 6: Major pests and safe movement of germplasm
391
COCONUT GENETIC RESOURCES
392
CHAPTER 6: Major pests and safe movement of germplasm
Coconut foliar decay virus (CFDV) Indexing or exclusion of germplasm from Vanuatu
Coconut cadang cadang viroid (CCCVd) Indexing or exclusion of germplasm from the Philippines
Tinangaja viroid (CTiVd) Indexing or exclusion of germplasm from Guam
Viroid-like sequences Indexing recommended for germplasm that is moved from countries
where these sequences are known to occur to countries where they
have not yet been reported.
Blast (Phytoplasma, MLO) A nursery disease which does not occur on adult trees
Marasmiellus spp. (bole rot, shoot rot) Possibly seed-borne, can be eliminated in embryo culture
Phomopsis cocoina (leaf spot) May be dispersed on husks. Recommendations are:
Bipolaris incurvata (leaf blight) • Embryo and pollen transfer should be carried out
• Healthy nuts should be partially de-husked and treated with an
appropriate fungicide
Phytophthora palmivora, P. katsurae Nuts may be infected internally, but then do not germinate.
(bud rot, fruit rot) Recommendations are:
• Embryo and pollen transfer should be carried out
• Healthy nuts should be partially de-husked and treated with an
appropriate fungicide
References
Al-Awadhi, HA, A Hanif, P Suleman and MS Montasser. 2002. Molecular
and microscopical detection of phytoplasma associated with yellowing
disease of date palms Phoenix dactylifera L. in Kuwait. Kuwait Journal
of Science and Engineering 29(2): 87-109
Cordova, I, P Jones, NA Harrison and C Oropeza. 2003. In situ PCR
detection of phytoplasma DNA in embryos from coconut palms with
lethal yellowing disease. Molecular Plant Pathology 4: 99-108.
Diekmann, M (ed.) 1997. Proceedings of the Meeting on Viroid-like
Sequences of Coconut. 21-23 April, 1997, Kajang (Kuala Lumpur),
Malaysia. ACIAR, Canberra /IPGRI Rome.
FAO/IPGRI. 1997. Addendum to the FAO / IBPGR Technical Guidelines
for the Safe Movement of Coconut Germplasm. Food and Agriculture
Organization of the United Nations, Rome/International Plant
Genetic Resources Institute, Rome, Italy. 48pp.
Frison, EA, CAJ Putter and M Diekmann (eds.). 1993. FAO/IBPGR
Technical Guidelines for the Safe Movement of Coconut Germplasm.
Food and Agriculture Organization of the United Nations, Rome/
International Board for Plant Genetic Resources, Rome, Italy.
393
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394
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Introduction
The International Coconut Genetic Resources Network (COGENT) of the
International Plant Genetic Resources Institute (IPGRI) has been assisting
the establishment of a multi-site International Coconut Genebank (ICG),
with sites in five countries, each representing one of the main coconut
ranges. They are Indonesia for Southeast Asia, India for South Asia,
Papua New Guinea for the South Pacific, Côte d’Ivoire for Africa and
the Indian Ocean, and Brazil for Latin America and the Caribbean region.
The pest pressure exerted on coconut throughout its major producing
regions, and the consequent phytosanitary risks to which it is exposed,
are a threat to its sustainability and sometimes lead to it being dropped
from a production system. The risks are rarely the same worldwide, and
are therefore important to assess them in order to promote germplasm
dissemination and exchange under optimum conditions.
Generally, it is the overall phytosanitary constraint that needs to be
documented in a given zone, not only to avoid the transfer of pests and
diseases but also to guarantee a satisfactory phytosanitary situation in
the collections planted at a given site. That means also taking into account
fungal diseases and the main coconut pests in the entomofauna that are
likely to jeopardise the establishment of a germplasm collection.
In order to determine this constraint, a pest risk assessment was
conducted in two ICG host countries, Côte d’Ivoire and Brazil. This paper
attempts to document the main pests and diseases in the study zones,
analyse the corresponding phytosanitary risk, determine their potential
as quarantine organisms and identify the phytosanitary risks involved
for collecting and exchanging germplasm.
Documentation
This study is based on all the information gathered by conventional
bibliographical research, the author’s knowledge of coconut diseases, or
395
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PRA can be carried out by considering either the pathway or the pest
(i.e., the form in which germplasm should be exchanged to significantly
reduce the risks of introducing a given pest). It is primarily the second
approach that will be taken, given the inventory of pests existing in the
study areas.
Results
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COCONUT GENETIC RESOURCES
Phytoplasma diseases
Blast is the main nursery disease on oil palm in Africa, and is also found
on coconut (Quillec et al. 1978). It is attributed to a phytoplasma due to
the preventive role played by tetracycline (Dollet 1980; Dollet 1985). Blast
is carried by a leafhopper, Recilia mica Kramer (Desmier de Chenon 1979).
The insect only seems to be infectious at certain times of the year and
incubation lasts a few days (de Franqueville et al. 1991). Blast has never
been reported on bearing palms, although it has been observed during
the first year after planting. Therefore, it is not a major threat to germplasm
movement.
LYD first occurred in Africa around 1930 (Bachy and Hoestra 1958),
in Togo and was called Kaincopé disease (Dollet and Giannotti 1976),
then in Southeast Ghana as Cape St Paul wilt (Dabek et al. 1976), in
Cameroon as Kribi disease (Dollet et al. 1977) and in Nigeria asAkwa
disease (Ekpo and Ojomo 1990). In East Africa, LYD causes serious
damage in Tanzania (Schuiling and Mpunami 1990), Kenya and
Mozambique (Mpunami et al. 1996). Analyses by restricted fragment
length polymorphism (RFLP) and polymerase chain reaction (PCR)
suggest a degree of difference between West African and East African
phytoplasmas (Tymon et al. 1997, 1998). The disease vector has not been
formally identified, but a plant hopper, Myndus adiopodoumeensis is
strongly suspected in Ghana (Dery et al. 1996). Phytoplasma diseases are
considered to have little chance of being carried by seeds, pollen, or
embryos (Dollet 1995). Phytoplasmas seem to have been detected in
embryos, but there is no evidence that these embryos would normally
germinate.
LYD is not widespread throughout the African and Indian Ocean
region; it has not been reported in Côte d’Ivoire, Benin or the Seychelles.
Fungal diseases
Phytophthora katsurae Ko and Chang causes immature nut fall and lethal
bud rots (Quillec and Renard 1984). P. katsurae, which was initially
identified as P. heveae, a very closely related species, seems to be the only
fungal species, found damaging in Côte d’Ivoire (Blaha et al. 1994). Its
incidence is effectively controlled by fungicide injection into the stem (de
Franqueville and Renard 1989). Phytophthora rot diseases are not
documented in the other African countries, but are suspected in Ghana.
Marasmiellus cocophilus Pegler is associated with the so-called lethal
bole rot, on seedlings or young palms in Kenya and Tanzania (Bock et al.
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1970). The fungus can act as a saprophyte, colonizing plant matter, either
from coconut palms or from other crops.
Phomopsis cocoina (Cooke) Punith. causes leaf spots and husk rot. It is
reported in Kenya, the Seychelles (quoted by Frison et al. 1993). It can be
borne by nuts.
Bipolaris incurvata causes leaf blight in the Seychelles. This symptom
is similar to the Helminthosporium leaf spot found in Côte d’Ivoire (Quillec
and Renard 1975), caused by Helminthosporium halodes (Dresch.), whose
limited economic importance has never warranted any intensive
intervention.
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COCONUT GENETIC RESOURCES
Phytoplasma disease
LYD was reported for the first time in the Cayman Islands around 1830,
has spread throughout the Caribbean, to Haiti, the Dominican Republic,
Cuba, Jamaica and then Florida. It reached the Yucatan peninsula in
Mexico in the 1980s (Cardeña et al. 1991) and was reported in Honduras
in 1996 by Ashburner et al. Its spread in LAC has been much faster than
in West Africa and it is carried by a leafhopper, Myndus crudus Van
Duzee (Cixiidae). Molecular techniques (RFLP, PCR) have shown greater
similarity between the phytoplasmas in LAC and East Africa than with
those in West Africa (Jones et al. 1995; Tymon et al. 1998). LYD occurs in
most of the countries in the zone in the COGENT network, but not in
Costa Rica, Guiana, Trinidad and Tobago, and Brazil. It also doest not
exist in Nicaragua or Venezuela.
It should be noted that phytoplasmas are reported to have been
detected in the embryos of nuts from diseased palms in Mexico. It has
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CHAPTER 6: Major pests and safe movement of germplasm
not been confirmed, but needs to be checked as soon as possible, using all
the appropriate techniques (electron microscopy, PCR), along with their
viability.
Fungal diseases
Phytophthora palmivora and Phytophthora katsurae live side by side in
Jamaica (Steer and Coates-Beckford 1990), but P. palmivora is usually
the only species found in the zone. It causes bud rot leading to the death
of coconut palm. Its incidence can be devastating in some parts of the
Caribbean, notably the Dominican Republic. It is known to exist in Cuba
and Central America, but there is no precise information. Phytophthora
rot diseases are not documented in Brazil. Bud rot symptoms have been
observed in the Fortaleza region of Ceara state and have been assimilated
in their advanced stage to those caused by this fungus. However, neither
the development of the disease, nor the isolations carried out, has
confirmed this hypothesis (de Franqueville 1996).
Bipolaris incurvata occurs in Central and South America. In particular,
it was reported in Brazil by Warwick (1997) where it causes
Helminthosporium leafspot, or ‘mancha-foliar’, particularly in the nursery.
Lixa pequena, caused by Phyllachora torendiella (Bat.) nov.comb., is a
widespread leaf disease in Brazil of varying intensity (Subileau et al. 1993).
It is also found in French Guiana. It can cause up to 50% loss of leaf area,
immature nut fall, and consequent yield loss of 20 to 40% (Renard 1999).
Lixa grande is another leaf disease associated with the previous one but
caused by Sphaerodothis acrocomiae (Montagne) von Arx & Muller. Queima
das folhas is also a leaf disease of Brazil, caused by Botryosphaeria cocogena
Subileau. Lixas generally promote the development of this fungus, for
which they represent access routes. This constitutes a perfect parasitic
complex (Subileau 1993, 1994; Warwick et al. 1994).
Phytomonas disease
Hartrot is endemic in northern South America, from Peru or Bahia state
in Brazil, to Costa Rica (Renard 1999). It is moving up to Honduras,
where infected oil palm marchitez is already found. It has also been
identified in Trinidad, under the name of Cedros wilt, where 15 000
coconut palms have been killed in three years. It causes sporadic damage
in Colombia, Venezuela, Surinam, Brazil and French Guiana.
Smallholdings, which do not have access to regular insecticide treatments,
can disappear within five years (M. Dollet 1999, personal communication).
The presence of Phytomonas (Trypanosomatids) is associated with any
Hartrot syndrome (Dollet et al. 1977a; Dollet and Lopez 1978). Hartrot is
carried by bugs of the Lincus genus (Louise et al. 1986) or Ochlerus genus
(Mariau 1985).
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COCONUT GENETIC RESOURCES
Nematode diseases
Red ring disease is caused by Bursaphelenchus cocophilus (Cobb) Baujard,
a nematode carried by an insect, Rhynchophorus palmarum (Curculionidae).
It is endemic in Central America, South America and the Caribbean
(Warwick et al. 1995). This disease also affects oil palm. Its incidence
varies depending on the region. In Venezuela, some oil palm plantations
have suffered 70% losses in 15 years. Red ring control consists of limiting
the vector populations, notably by using aggregation pheromones.
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CHAPTER 6: Major pests and safe movement of germplasm
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COCONUT GENETIC RESOURCES
Recommendations
The technical directives drawn up by the FAO impose a few basic measures
that govern coconut germplasm movements. Among the measures worth
noting in particular, is that such movement must be by embryo cultures
or pollen, using the techniques described in the recommendations of the
FAO.
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CHAPTER 6: Major pests and safe movement of germplasm
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Bock, KR, MH Ivory and BR Adams. 1970. Lethal bole rot disease of
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Cardeña, R, MAVillanueva, JM Santamaria and C Oropeza. 1991.
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Dabek, AJ, CG Johnson and HC Harries. 1976. Mycoplasma-like
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Desmier, de Chenon R. 1979. Mise en évidence du rôle de Recilia mica
Kramer (Homoptera, Cicadellidae, Deltocephalinae) dans la maladie du
blast des pépinières du palmier à huile en Côte d’Ivoire. Oléagineux
34:107-112.
Diekmann, M. 1997. Safe movement of coconut germplasm. Pp. 9-11.
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viroids and viroid-like sequences in coconut, 21-23 April 1997, Kuala
Lumpur, Malaysia. IPGRI, Rome, Italy.
Dollet, M. 1980. Research on the etiology of blast of oil and coconut palms.
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Proceedings of the International Council on Lethal Yellowing. ARS
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Dollet, M. 1984. Plant diseases caused by flagellate protozoa
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Dollet, M. 1985. Recherches étiologiques sur les syndromes pathologiques
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Dollet, M. 1995. Safe movement of coconut germplasm. Pp. 139-147. In:
C Oropeza, FW Howard and GR Ashburner (eds). Lethal yellowing:
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Dordrecht, The Netherlands.
Dollet, M and J Giannotti. 1976. Maladie de Kaïncopé: présence de
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Dollet, M, J Giannotti and M Ollagnier. 1977a. Observation de
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Dollet, M, J Giannotti, JL Renard and SK Ghosh. 1977b. Etude d’un
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Julia, JF. 1990. Recherches sur les possibles insectes vecteurs de la maladie
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noix. Oléagineux 39(10):477-485.
Renard, JL. 1990. Mission Défense des cultures au Brésil: les problèmes
sanitaires sur cocotier. EMBRAP - Cirad/IRHO. Doc IRHO n° 2266,
52p.
Renard, JL. 1999. Symptomatologie et incidence économique. Pp.19-75.
In: D Mariau (ed). Les maladies des cultures pérennes tropicales.
408
CHAPTER 6: Major pests and safe movement of germplasm
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COCONUT GENETIC RESOURCES
410
CHAPTER 6: Major pests and safe movement of germplasm
Introduction
Pest risk analysis (PRA) or Import risk analysis (IRA) is the process that
is used to technically justify phytosanitary measures that are imposed on
the importation of plants and plant products. Although the process is
primarily used to determine import conditions for commercial quantities
of traded commodities, it must be applied also to importations of small
quantities of germplasm because in both cases there must be technical
justification for the phytosanitary measures imposed. International
guidelines for the pest risk analysis methodology have been developed
by the Interim Commission on Phytosanitary Measures (ICPM) under its
mandate to harmonise plant quarantine/phytosanitary procedures at a
global level under the World Trade Organisation’s Sanitary and
Phytosanitary Agreement (SPS Agreement). The two main International
Standards for Phytosanitary Measures (ISPMs) are #2 Guidelines for pest
risk analysis (FAO 1996a) and #11 Pest Risk Analysis for quarantine pests
(FAO 2001). The identification of pests of concern in the movement of
germplasm and the formulation of phytosanitary conditions for the
management of these pests were initially developed at an international
level by FAO/IPGRI (Frison et al. 1993; Diekmann, this chapter). Later,
this publication was modified for one key pest using the ISPM Guideline
for PRA methodology at the ACIAR/COGENT/IPGRI meeting in
Malaysia (Diekmann 1997).
The purpose of this article is to examine the process of PRA in more
detail, to identify major pests of concern at a global level and to suggest
pest management options that are available that could be adopted at
national or regional level to reduce pest risk to an acceptable level. In this
case, the task is to devise pest management strategies for the exchange of
seednuts, embryo cultures and pollen among the International Coconut
Genebanks (ICGs) of the International Coconut Genetic Resources
Network (COGENT), and between the ICGs and their country members.
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COCONUT GENETIC RESOURCES
412
CHAPTER 6: Major pests and safe movement of germplasm
country. By subtracting the second (importing) country list from the first
(exporting) country list, a list of potential quarantine pests that move
into Phase 2 of the procedure are determined.
Pests that are recorded as being associated with coconut growing but
are not on the germplasm pathway such as larger mammals (vertebrates),
nematodes and weeds are eliminated from the analysis for the following
reasons:
Vertebrate pests
Rats (Rattus sp) and the plantain squirrel (Callsciurus notatus) are too
large to be in any pathway considered for germplasm exchange.
Nematodes
Nematodes can be serious pests of coconuts, but are root pests and would
not be in the pathway and are not considered further in this analysis. If
nuts were harvested from the ground and could be contaminated with
soil, nematodes could be in the pathway.
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COCONUT GENETIC RESOURCES
Weeds
A large number of weed species are recorded in association with the
cultivation of coconuts as an economic crop. Many are economically
significant. However, none would be considered in the pathway, as it
would be expected that only seednuts from the palm would be used for
germplasm exchange and they would be cleaned of any material prior to
partial de-husking. Weeds would only be a problem if nuts were
harvested from the ground and could be contaminated with soil.
Arthropod pests
Seednuts. Leaf and trunk pests are not considered to pose a serious risk
with the import of nuts. A number of pests are recorded on flower heads
and young nuts and are considered in the pathway. A number of general
pests such as scales and mites are found on all parts of the coconut plant
and have been considered as hitchhikers. These pests will require risk
management options.
Embryo cultures. Arthropod pests are not considered to enter the pathway
for imports that are made as embryo cultured material because of the
technique that is used and the sterile conditions under which the material
is extracted and cultured.
Pollen. A number of pests infest the floral parts of the coconut such as
Tirathaba rufivena and Unaspis citri and could be a problem if care is not
taken during harvest. However, they are large enough to be able to be
detected by visual inspection.
Mites are sometimes a problem with contamination of pollen harvested
in the field, and would require examination using a hand lens or binocular
microscope to detect infestation.
Diseases
Seednuts. Pests are only considered of quarantine significance if they are
known to be seed borne, such as Marasmius palmivorus (oil palm bunch
rot). Many pests are systemic but not seed transmitted such as Foliar
decay and Anomola pallida.
Embryo cultures. Pests that are systemic may not necessarily be present in
the embryo. However, one pathogen cadang-cadang, has been detected
in the embryo, but is not proven to be seed borne.
Pollen. Most pests do not infect pollen although cadang-cadang has been
detected in pollen. Whether it is pollen borne is not proven.
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CHAPTER 6: Major pests and safe movement of germplasm
Arthropod pests
Seednuts. The accepted method of managing arthropod pests has been
fumigation with an appropriate broad-spectrum chemical (Frison et al.
1993). Currently, the practice is to remove part of the husk of the coconut,
thereby removing some of the pests, and to fumigate with methyl bromide
(MeBr) at the rate of 32g per cubic metre for three hours at 21oC. This
treatment will effectively deal with all arthropod pests that have casually
415
COCONUT GENETIC RESOURCES
moved to the coconut fruit, such as the leaf feeders, scales, thrips, bugs
and mites.
Methyl bromide is known to have some phytotoxic effect on coconuts
and care should be exercised in undertaking the treatment. The treatment
at 32g per cubic metre for 24 hours at 20oC is used for devitalisation
treatment in Australia (treatment A7.b. in FAO 1984).Temperatures for
the treatment should not be high, water should be placed in the chamber
in trays before the fumigation begins to increase humidity. The dehusked
nuts should be removed from the chamber as soon as the treatment is
completed and placed in a cool, ventilated area to allow the fumigant to
disperse from around the coir.
If MeBr is not available as a fumigant, then aluminium phosphide is
an alternative at the rate of 225 ppm of phosphine gas for 120 hrs at
20oC (treatment B4h.(5)(e) in FAO 1984) or 2-3 tablets per cubic metre
for 24-72 hours (treatment C13 (30) in FAO 1984).
Fungal diseases
Seednuts. A number of fungal diseases have been recorded on seednuts
and flower clusters and therefore have the potential to be in the pathway.
Nevertheless, whether all of these are seedborne has not been determined,
although the risk exists. Invoking the precautionary principle, it is
recommended that where these diseases are identified by the PRA as of
concern, the nuts should be grown in post-entry quarantine (PEQ). Where
a disease occurs generally in an area, only healthy nuts should be selected
for exchange. Where diseases are not widespread and do not occur in
specific and defined areas, then nuts should be sourced from these pest
free areas. Seednuts should be treated with an acceptable and registered
fungicide before sowing in PEQ.
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CHAPTER 6: Major pests and safe movement of germplasm
Pollen. Pollen should be visually inspected after gathering for fungal spores
and again at point of entry. Pollen found infected should be destroyed.
Seednuts. They should never be moved directly from areas where non-
cultivable mollicutes or Phytomonas occur, to areas not affected with these
pathogens (Frison et al. 1993). This is recommended despite the fact that
there is no firm evidence that any of these systemic diseases are
transmitted by seed. The research on cadang-cadang in controlled non-
infected areas has not been completed so material from the infected area
should not be exchanged, or only made from palms indexed free of the
viroid.
Embryo cultures. The presence of some systemic diseases has been detected
in the embryo of coconuts. Therefore, material must only be taken from
plants that are known to be free of these diseases, or the material taken
as tissue must be indexed before release for growing in a propagation
nursery.
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COCONUT GENETIC RESOURCES
Treatments
Because of the uncertainty about the distribution of many of these pests
and lack of precise information on their biology, particularly the parts of
the plant affected, it is prudent to require a set of general measures to
address overall pest risk as well as requirements for specific regulated
pests. These general recommendations are as follows:
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CHAPTER 6: Major pests and safe movement of germplasm
References
APPPC. 1987. Insect pests of economic significance affecting major crops
of the countries in Asia and the Pacific region. Technical Document
No. 135. Regional FAO Office for Asia and the Pacific (RAPA),
Bangkok, Thailand.
Batugal, P. 1997. Implications of restricted coconut germplasm movement.
Pp. 4-7. In: M Diekmann (ed). Proceedings of the meeting on viroid-
like sequences of coconut, 21-23 April 1997, Kajang, Kuala Lumpur,
Malaysia. ACIAR, Australia/IPGRI, Rome, Italy.
Balingasa, EN and GA Santos, 1978. Manual for coconut hand pollination
technique. Breeding and Genetics Division, Philippine Coconut
Authority, Bago-Oshiro, Davao City, Philippines.
CABI. 2003. Crop Protection Compendium. CDRom. Commonwealth
Agriculture Bureau International, Wallingford, UK.
Diekmann, M (ed). 1997. Proceedings of the meeting on viroid-like
sequences in coconut. 21-23 April 1997, Kajang, Kuala Lumpur,
Malaysia. ACIAR, Australia/IPGRI, Rome, Italy.
FAO. 1984. International plant quarantine treatment manual, FAO Plant
production and protection paper, 50. FAO, Rome, Italy. 220pp.
FAO. 1996a. Guidelines for pest risk analysis. ISPM #2. FAO, Rome, Italy
FAO. 1996b. Guidelines for the establishment of pest free areas. ISPM #
4. FAO. Rome, Italy.
FAO. 2001. Pest risk analysis of quarantine pests. ISPM #11. FAO Rome.
Italy
Frison, EA, CAJ Putter and M Diekmann.1993. Technical guidelines for
the safe movement of coconut germplasm [and addendum (1997)].
FAO/IPGRI, Rome, Italy.
Foale, M and PW Lynch. 1994. Coconut improvement in the South Pacific.
Proceedings of a workshop in Taveuni, Fiji. ACIAR Proceedings #53.
ACIAR, Canberra, Australia.
419
COCONUT GENETIC RESOURCES
420
CHAPTER 6: Major pests and safe movement of germplasm
India to Indonesia
Management Options
Quarantine Pests
Nuts Embryo Pollen
Arthropods
• Coccus hesperidum (brown soft scale)
• Nipaecoccus nipae (spiked mealybug)
• Oligonychus biharensis Fumigation Not applicable Inspection
• Raoiella indica
• Tetranychus ludeni (red spider mite)
Diseases
• Hypocrea rufa (fruit rot: Citrus spp.) Fungicide and Not applicable Not applicable
PEQ
• Kerala wilt (root wilt) Area freedom* Area freedom Area freedom
Indonesia to India
Management Options
Quarantine Pests
Nuts Embryo Pollen
Arthropods
• Hidari irava (coconut skipper)
• Mahasena corbetti (coconut case caterpillar)
• Rhabdoscelus obscurus (New Guinea Fumigation Not applicable Inspection
sugarcane weevil)
• Unaspis citri (citrus snow scale)
Disease
• Natuna wilt Area freedom Area freedom Area freedom
• Kerala wilt (root wilt) Area freedom Area freedom Area freedom
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COCONUT GENETIC RESOURCES
Diseases
• Phytophthora katsurae (chestnut downy Fungicide and Not applicable Not applicable
mildew) PEQ
422
CHAPTER 6: Major pests and safe movement of germplasm
Treatment recommendations
423
COCONUT GENETIC RESOURCES
424
CHAPTER 6: Major pests and safe movement of germplasm
Chapter 7
Information, public
awareness, institutional
support and
partnerships
425
COCONUT GENETIC RESOURCES
426
CHAPTER 7: Information, public awareness,institutional support and partnerships
Background
During the International Workshop on Coconut Genetic Resources, held
in Cipanas (Indonesia) in October 1991, two major recommendations
were made for coconut: the first was to set up the International Coconut
Genetic Resources Network (COGENT), and the second, concerning
network information and documentation, stated as follows:
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COCONUT GENETIC RESOURCES
Brazil, China, India, Indonesia, Ivory Coast, Jamaica, Mexico, Papua New
Guinea, Philippines, Sri Lanka, Thailand, Vanuatu and Vietnam
(Bourdeix 1996; 1997a; 1997b; 1998; Bourdeix et al. 1999; Baudouin 2002)
were visited and local researchers were trained in gathering and inputting
data into the database. Such visits also provided an excellent opportunity
to test the software in real situations and to detect items that needed
improvements.
Objectives
The work on CGRD was initiated for the main purpose of providing the
COGENT members with an easily consultable computerized catalogue
of accessions representing a large number of cultivars spread throughout
the coconut growing zone, in order to gain a clearer picture of coconut
genetic diversity and thereby promote exchange of germplasm. This
continues to be the main objective.
Another purpose of this database is for the COGENT country members
to establish a list of passport descriptors and standardize
characterization/assessment descriptors specific to coconut to be used
by all partners. In addition, the database was created to speed up cultivar
characterization and evaluation. The members of COGENT supplying
the information contained in the database are regularly encouraged to
add new information or complete the information already recorded
requiring them to make a considerable effort to gather information and
thereby improve their knowledge of the cultivars planted in their
genebanks.
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CHAPTER 7: Information, public awareness,institutional support and partnerships
Organization
The data entered into the base are the values of passport and
characterization descriptors for coconut accessions defined by COGENT.
It also includes photos of the palms, along with results and diagrams
from microsatellite molecular analyses. Based on an analysis of these data,
and of the relations and constraints existing between them, a conceptual
model of database organization was established. It provided a formal
description of the database (Figure 1) using entities (symbolized by
rectangles) corresponding to the natural objects identified in the system
(sites, accessions, cultivars, photos, etc.), and relations (symbolized by
circles) between those entities. This model was modified during
development, when molecular data or photos were integrated.
In the model, accessions and cultivars form the core of the database.
The database structure respects certain management rules, such as:
• It is compulsory for an accession to belong to a collection site and
its number is unique in the database;
• A cultivar can be represented by several accessions; and
• Photographs and molecular data are attached to the cultivars.
The conceptual model was translated into a relational type logical model
(Figure 2) consisting of tables (symbolized by rectangles) linked to each
other, derived from the entities and relations of the conceptual model. A
relational type organization was chosen because it is a widely used
429
COCONUT GENETIC RESOURCES
organization, which has proven its worth and enables the use of a very
powerful query language. Lastly, a very large number of commercial
database management systems function with this type of organization.
This logical model was implemented in the chosen relational database
management system.
Functions
The CGRD has a management system endowed with functions that can
be used to carry out all the necessary operations on the data it contains.
Among the functions available, which are listed below, there are those
that are found in conventional database management systems, but there
are also specific functions, given the nature of the database:
• Entering/consulting information on collection sites
• Entering/consulting data on individual accessions
• Selections in the database using criteria
• Creation of various types of reports
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CHAPTER 7: Information, public awareness,institutional support and partnerships
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COCONUT GENETIC RESOURCES
Contents
Each accession in the database is characterized by 145 descriptors, of
which there are 72 passport descriptors and 73 characterization and
evaluation descriptors. Passport descriptors are divided into two groups:
the accession data group, which contains accession characteristics
(category, colour, cultivar, parental origin, etc.) and the collection data
group, which contains data on the site and the original population from
which the accession was sampled.
The characterization and evaluation descriptors are generally
quantitative traits, whose values are means, calculated from values
measured on several palms. A standard deviation is associated with each
of the means, to have an idea of the variability of the trait within the
accessions. To obtain these values, a data management system has to be
put in place for every palm in the field. This is not trouble-free, because it
has to be carried out over a long period following a regular schedule. In
order to help researchers to follow this management protocol, COGENT
has committed CIRAD in 1996 to develop dedicated software called CDM
(Coconut Data Management). This software was designed to manage
experimental data observed on collections and experimental fields of
coconut and other crops. The version 3 delivered in March 2000 is able
to manage the palm identification characters along with data on
observations during the vegetative phase, leaf morphology, stem
measurements and state of the palms. It is possible to execute powerful
queries on the database, to export data into external file, and to make
statistical analysis of widely used experimental designs.
The CGRD characterization and evaluation descriptors are divided
into:
• Site descriptors, information about the site at which the acces-
sion is to be found and about the people assessing it;
• Germination descriptors, germination rates and percentages;
• Stem descriptors, stem morphology (height, circumference,
number of internodes, etc.);
• Leaf descriptors, leaf morphology (petiole, rachis, leaflets, etc.);
• Inflorescence descriptors, to characterize inflorescences (pedun-
cle, spikelets, number of female flowers, etc.);
• Flowering descriptors, such as the length of male and female
phases, information on overlapping of these phases, spathe emis-
sion date, inflorescence opening date, etc.;
• Fruit descriptors, nut characteristics (shape, weight of different
compartments, dry matter weight, etc.);
• Yield descriptors, number of bunches, number of nuts, quantity
of copra; and
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COCONUT GENETIC RESOURCES
In 2003, the main statistics about the database were as follows (Table 2a
and 2b):
• The accessions of 28 genebanks located in South Asia, Southeast
Asia, the South Pacific, Africa, and the Caribbean−Central
America zone figure in the database.
• Some countries, such as Indonesia, Malaysia and Papua New
Guinea, have at least two sites where collections are maintained,
with a maximum of four for Indonesia.
• A little over 60% of the accessions are in the South and Southeast
Asia, primarily in India, the Philippines and Indonesia.
• Not all the descriptors are filled in; a little over half of the acces-
sions (all sites combined) have values for 25% to 50% of their
passport and evaluation descriptors.
• Very few accessions have values for 100% of their passport
descriptors or evaluation descriptors.
• The database lists 599 Tall cultivars, 111 Dwarf cultivars, 1 semi-
Tall cultivar plus a few others of small size but cross-fertilizing.
• Some cultivars such as the Malayan Tall, Pakistan Tall are de-
scribed very often in the database, represented by 49 and 32 ac-
cessions, respectively, whereas more than 70% of the cultivars
are only represented by one accession.
• The database contains 754 photos representing a little over 20%
of the cultivars. The aspects illustrated are the whole plant, the
crown, the inflorescence, the fruit, genetic diversity, and cultural
aspects of the coconut palm.
• Photos of inflorescence, bunch and fruit are the most numerous.
• The molecular data contained in the database come from
microsatellite electrophoresis studies carried out on cultivars. On
average, 14 microsatellite loci have been analyzed per cultivar.
• For each cultivar and each locus, the frequencies of the different
alleles found at the locus are indicated.
• Based on the allelic frequencies of the microsatellite loci studied,
cultivars have been assigned to different molecular affiliation
groups. The molecular group of each cultivar is also recorded in
the database.
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CHAPTER 7: Information, public awareness,institutional support and partnerships
cultivars are stored in the database. Lastly, data per microsatellite locus
(SSR locus type, allele size, number of alleles, chromosome etc.), along
with images of the microsatellite electrophoretic profiles and profile
interpretation diagrams are also recorded in the database.
Table 2a. Number of accessions per site or per region according to the percentage of
passport descriptors (P) filled in
Number of
Site P=0 0<P≤25 25<P≤50 50<P≤75 75≤P≤100
accessions
CNRA Marc Delorme Research Station,
Côte d'Ivoire 99 0 0 28 7
Coconut Programme, OPRI, Ghana 16 0 16 0 0 0
CRC Sémé Podji, Benin 4 0 0 4 0 0
National Coconut Development
Programme, Tanzania 72 0 1 63 8 0
AFRICAN REGION 191 0 17 95 72 7
Centro de Investigacion Cientifica de
Yucatan, Mexico 20 0 0 20 0 0
Coconut Industry Board, Jamaica 60 0 44 15 1 0
EMBRAPA, Brazil 16 0 0 0 16 0
LATIN AMERICA-CARIBBEAN REGION 96 0 44 35 17 0
BARI, Bangladesh 40 0 22 16 2 0
Coconut Research Institute, Sri Lanka 78 0 0 46 32 0
CPCRI, India 212 0 71 74 67 0
RS, Pakistan 32 0 32 0 0 0
SOUTH ASIAN REGION 362 0 125 136 101 0
Cocoa and Coconut Research Institute,
PNG 3 0 3 0 0 0
Ministry of Agriculture, Tonga 7 0 7 0 0 0
Saraoutou Research Station, Vanuatu 79 0 6 26 45 2
Stewart Research Station, PNG 54 0 23 31 0 0
Taveuni Coconut Centre, Fiji 11 0 2 0 8 1
RS, Western Samoa 9 0 9 0 0 0
RS, Yandina, Solomon Islands 21 0 17 4 0 0
SOUTH PACIFIC REGION 184 0 67 61 53 3
RS, China 17 0 2 15 0 0
Department of Agriculture, Sabah,
Malaysia 45 0 22 23 0 0
MARDI, Hilir, Perak, Malaysia 44 0 10 34 0 0
Bone Bone Experimental Garden, S.
Sulawesi, Indonesia 41 0 6 35 0 0
Mapanget Experimental Garden, N.
Sulawesi, Indonesia 74 0 0 63 11 0
Pakuwon Experimental Garden, W.
Java, Indonesia 25 0 3 21 1 0
Sikijang Experimental Garden,
Indonesia 30 0 0 10 20 0
Philippine Coconut Authority,
Philippines 224 0 3 220 1 0
Chumphon Horticultural Research
Centre, Thailand 52 0 10 37 5 0
Dong Go Experimental Center, Vietnam 31 0 0 1 29 1
SOUTHEAST ASIAN REGION 583 0 56 459 67 1
TOTAL FOR ALL REGIONS 1416 0 309 786 310 11
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COCONUT GENETIC RESOURCES
Table 2b. Number of accessions per site or per region according to the percentage of
evaluation descriptors (E) filled in
Number of
Site E=0 0<E≤25 25<E≤50 50<E≤75 75≤E≤100
accessions
CNRA Marc Delorme Research Station,
Côte d'Ivoire 99 0 28 28 43 0
Coconut Programme, OPRI, Ghana 16 12 0 4 0 0
CRC Sémé Podji, LOCATION Benin 4 0 0 4 0 0
National Coconut Development
Programme, Tanzania 72 0 3 69 0 0
AFRICAN REGION 191 12 31 105 43 0
Centro de Investigacion Cientifica de
Yucatan, Mexico 20 0 19 1 0 0
Coconut Industry Board, Jamaica 60 0 2 58 0 0
EMBRAPA, Brazil 16 0 0 16 0 0
LATIN AMERICA-CARIBBEAN
REGION 96 0 21 75 0 0
BARI, Bangladesh 40 0 3 3 34 0
Coconut Research Institute, Sri Lanka 78 0 14 51 13 0
CPCRI, India 212 0 1 138 73 0
RS, Pakistan 32 0 32 0 0 0
SOUTH ASIAN REGION 362 0 50 192 120 0
Cocoa and Coconut Research Institute,
PNG 3 0 0 3 0 0
Ministry of Agriculture, Tonga 7 0 6 1 0 0
Saraoutou Research Station, Vanuatu 79 0 6 10 1 62
Stewart Research Station, PNG 54 0 0 54 0 0
Taveuni Coconut Centre, Fiji 11 0 4 3 4 0
RS, Western Samoa 9 0 0 9 0 0
RS Yandina, Solomon Islands 21 0 0 21 0 0
SOUTH PACIFIC REGION 184 0 16 101 5 62
RS, China 17 0 0 17 0 0
Department of Agriculture, Sabah
Malaysia 45 0 15 30 0 0
MARDI Hilir Perak, Malaysia 44 0 5 2 37 0
Bone Bone Experimental Garden, S.
Sulawesi, Indonesia 41 0 0 41 0 0
Mapanget Experimental Garden, N.
Sulawesi, Indonesia 74 0 29 45 0 0
Pakuwon Experimental Garden, W.
Java, Indonesia 25 0 0 25 0 0
Sikijang Experimental Garden,
Indonesia 30 0 0 30 0 0
Philippine Coconut Authority,
Philippines 224 0 5 138 81 0
Chumphon Hort. Research Centre,
Thailand 52 0 0 52 0 0
Dong Go Experimental Center,
/Vietnam 31 0 15 12 4 0
SOUTHEAST ASIAN REGION 583 0 69 392 122 0
TOTAL FOR ALL REGIONS 1416 12 187 865 290 62
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CHAPTER 7: Information, public awareness,institutional support and partnerships
Technical references
The CGRD management system for the relational structure is Microsoft
Visual FoxPro software, which operates under Microsoft Windows. Tables
are in Dbase (DBF) format, which is a universally recognized format.
Conclusion
The CGRD is a very useful tool for coconut genetic resources management,
and can help planting material exchanges. It can be considered that the
development of the database is now mostly complete. However, extra
outputs for dedicated software such as the new geographical information
system DIVA-GIS, which is tailor-made for genetic resources, should be
included. It is also expected that the coconut descriptors list is a dynamic
one and will evolve as new traits are added or the existing ones are
modified. The CGRD has been designed to deal with such changes. For
example, some morphological descriptors, such as the nut germ pore
size and shape, may be added in the future. Moreover, the existing
description of yield is often considered as insufficient by researchers.
Similarly, the information about the pedigree of the accessions needs to
be clarified and simplified in order for researchers to locate more easily
the original collection site of the accessions.
Data for a large number of accessions on some of the descriptors is
incomplete. Some key data, such as the inventory/counting of the living
coconut palms, need to be updated much more often. It would also be
worth adding photos, as too few varieties are illustrated. So far, molecular
data have only involved microsatellite markers, but it is possible to add
results from other types of molecular markers.
It is important to ensure that the number of accessions, photos and
molecular data are increased significantly. This will have to be carried
out by the national curators. Regular visits by technical experts to
participating countries should be promoted to keep the momentum going
and make the CGRD effort sustainable.
Lastly, it would be worthwhile if a version either complete or, only
consultative, or even restricted to passport data of this database could be
made accessible via the internet, as is the case for some other plants such
as banana (Arnaud and Horry 1997). This would greatly help the global
collaborative effort on coconut genetic resources conservation and their
utilization. But this would require cooperation and agreement of the
COGENT member countries.
437
COCONUT GENETIC RESOURCES
References
Arnaud, E and JP Horry. 1997. Musalogue: a catalogue of Musa
germplasm. Papua New Guinea collecting missions 1988-1989. http:/
/www.ipgri.cgiar.org/system/page.asp?theme=4#Bananasandpla.
Baudouin, L, R Bourdeix, F Bonnot, Ch Hamelin and A Rouzière. 2000.
COGENT establishes an international coconut genetic resources da-
tabase (CGRD). COGENT Newsletter 3:1-2.
Baudouin, L. 2002. Study on genetic resources status in Hainan – China
(visit 12-18 December 2000). Doc CIRAD-CP SIC no. 1505. CIRAD,
Montpellier, France. 54p.
Bourdeix, R. 1996. Coconut germplasm in Jamaica, Mexico and Brazil.
Mission Report, March 1997, Doc CIRAD-CP no. 548. CIRAD,
Montpellier, France. 53p.
Bourdeix, R. 1997a. Coconut germplasm in Tanzania, Sri Lanka and In-
dia. Mission Report, March 1997, Doc CIRAD-CP No. 739. CIRAD,
Montpellier, France. 49p.
Bourdeix, R. 1997b. Actions de formation en Afrique et Amérique Latine/
Caraïbes. Cours de formation des formateurs à l’utilisation du manuel
Stantech (Techniques Standardisées de Recherches pour
l’Amélioration du Cocotier). Mission Report, August 1997, Doc
CIRAD-CP No. 857. CIRAD, Montpellier, France. 49p.
Bourdeix, R. 1998. Coconut germplasm and breeding in Papua New
Guinea and Vanuatu. CIRAD 1997 Annual Review Report (March
1998), Doc CIRAD-CP No. 998. CIRAD, Montpellier, France. 50p.
438
CHAPTER 7: Information, public awareness, institutional support and partnerships
Introduction
In recent years, various factors have led scientists and development
workers to recognize the need to convince people outside their field of
the value of their work. These factors include the world’s growing
development challenges, the revolutionary potential of information to
bring about large-scale change, and greater competition for fewer
resources.
In particular, the remarkable growth of the Internet over the past
decade has transformed us from a society of one-way information
providers into a society of communicators that is based on open debate
and transparency. At the same time, as the lines between national,
regional and international development concerns have started to blur,
there have been greater incentives to seek common approaches to global
problems. Multilateral approaches to problem-solving are terrifically
complex — not to mention expensive — hence the need for broad popular
support for development activities is particularly important.
Most recent international agreements concerned with agriculture and
the environment stress the important role that can be played by public
awareness in the promotion of sustainable development. Agenda 21
devotes an entire chapter to the subject. The Convention on Biological
Diversity also emphasizes the importance of public awareness. More
recently, the Global Plan of Action for plant genetic resources, adopted
in Leipzig, Germany in 1996 by 160 countries, identified public awareness
as one of its 20 priority activities.
Public awareness (PA) is an important tool for mobilizing popular
opinion and for generating and sustaining action and political and
funding support within countries and globally. A targeted PA
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COCONUT GENETIC RESOURCES
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Methods/Tools of information
PA Goals and specific objectives Target audience
dissemination
Promote the conservation of
coconut genetic resources:
• Develop and strengthen Policy makers/ • Newspaper articles
collaboration between and government officials • COGENT Newsletter
among coconut-producing • COGENT Secretariat-produced
countries and partner institutions publications/ books (selected)
in the conservation and use of • Brochures/ pamphlets/ flyers
coconut genetic resources; • Factsheets
• Refine embryo culture and • Internet (COGENT webpage)
acclimatization techniques; • Mass media (television/ radio)
• Encourage the in situ and on-
farm conservation of coconut
genetic resources through better Donors • Newspaper articles (selected)
cultivars, increased yields and • COGENT Secretariat-produced
increased coconut-based farm publications/ books (selected)
incomes; and • COGENT Newsletter
• Identify suitable varieties/hybrids • Brochures/ pamphlets/ flyers
for yield improvement and
• Factsheets
enhanced adaptation
• Project/progress reports
• Internet (COGENT webpage)
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COCONUT GENETIC RESOURCES
Methods/Tools of information
PA Goals and specific objectives Target audience
dissemination
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443
COCONUT GENETIC RESOURCES
444
CHAPTER 7: Information, public awareness, institutional support and partnerships
445
COCONUT GENETIC RESOURCES
tech’ methods for farmers to produce these items without heavy capital
outlay for equipment and for material inputs.
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COCONUT GENETIC RESOURCES
448
CHAPTER 7: Information, public awareness, institutional support and partnerships
18. Coconut hybrids for smallholders. Project reports and related pa-
pers of the multilocation trials to identify suitable coconut hybrids and
varieties for Africa, Latin America and the Caribbean (2005)
To help small coconut farmers address some of the nagging problems
they are facing such as decreasing farm productivity, low coconut yields
and unstable markets of their traditional products, the Common Fund
for Commodities (CFC) supported a project of COGENT/IPGRI from 14
December 1999 to 15 December 2004 entitled, ‘Coconut Germplasm
Utilization and Conservation to Promote Sustainable Coconut
Production’. In this project, the performance of 34 promising coconut
hybrids and varieties were tested in three African (Benin, Côte d’Ivoire,
Tanzania) and three Latin American and Caribbean countries (Brazil,
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COCONUT GENETIC RESOURCES
COGENT Newsletters
1. COGENT. March 1999. COGENT Newsletter, Issue No. 1. IPGRI-
APO, Serdang, Selangor, Malaysia.
2. COGENT. October 1999. COGENT Newsletter, Issue No. 2. IPGRI-
APO, Serdang, Selangor, Malaysia.
3. COGENT. May 2000. COGENT Newsletter, Issue No. 3. IPGRI-APO,
Serdang, Selangor, Malaysia.
4. COGENT. November 2000. COGENT Newsletter, Issue No. 4. IPGRI-
APO, Serdang, Selangor, Malaysia.
5. COGENT. March 2002. COGENT Newsletter, Issue No. 5. IPGRI-
APO, Serdang, Selangor, Malaysia.
6. COGENT. October 2002. COGENT Newsletter, Issue No. 6. IPGRI-
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COCONUT GENETIC RESOURCES
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Table 1. Summary table of PA materials produced and farmers’ field days conducted,
by project participating country
Number of PA materials
Number of farmer field days
Country produced and PA activities
conducted
conducted*
Bangladesh 14 7
India 63 7
Sri Lanka 7 7
Philippines 26 7
Indonesia 5 7
Vietnam 17 7
Fiji 5 6
Papua New Guinea 3 6
TOTAL for all countries 140 54
*including media (TV and radio) coverage
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COCONUT GENETIC RESOURCES
References
Batugal, P. 2005. COGENT: Its history and achievements. APCC, Jakarta,
Indonesia. Cord Journal 21 (2):51-62.
Batugal, P and J Oliver (eds). 2003. Poverty reduction in coconut grow-
ing communities, Volume I: The framework and project plan. IPGRI-
APO, Serdang, Selangor, Malaysia.
Batugal, P and J Oliver (eds). 2005. Poverty reduction in coconut grow-
ing communities, Volume III: Project achievements and impact. IPGRI-
APO, Serdang, Selangor, Malaysia.
Batugal, P and R Coronel (eds). 2004. Poverty reduction in coconut grow-
ing communities, Volume II: Mobilizing for action. IPGRI-APO,
Serdang, Selangor, Malaysia.
Batugal, P, D Benigno and J Oliver (eds). 2005. Coconut hybrids for
Smallholders. Project reports and related papers of the multilocation
trials to identify suitable coconut hybrids and varieties for Africa,
Latin America and the Caribbean. CFC Technical Paper No. 42.
IPGRI-APO, Serdang, Selangor, Malaysia.
Batugal, P, R Bourdeix and L Baudouin. Coconut breeding. In Breeding
plantation tree crops: Improving productivity and sustainability. (in
press)
Batugal, PA and F Engelmann (eds). 1998. Coconut embryo in vitro cul-
ture. Papers presented at a Workshop on Embryo Culture, 27-31
October 1997, Banao, Guinobatan, Albay, Philippines. IPGRI-APO,
Serdang, Selangor, Malaysia.
Batugal, PA, V Ramanatha Rao and C Bong (eds). 1998. Promoting multi-
purpose uses and competitiveness of the coconut. Proceedings of a
workshop, 26-29 September 1996, Chumphon, Thailand. IPGRI-APO,
Serdang, Selangor, Malaysia.
Batugal, P, V Ramanatha Rao and J Oliver. Coconut genetic resources.
IPGRI-APO, Serdang, Selangor, Malaysia. (In press).
Diekmann, M (ed). 1997. Viroid-like sequences of coconut. Proceedings
of a meeting, 21-23 April 1997, Kajang, Kuala Lumpur, Malaysia.
Australian Centre for International Agricultural Research, Canberra,
Australia/IPGRI, Rome, Italy.
Engelmann, F, P Batugal and J Oliver (eds). 2002. Coconut embryo in
vitro culture: Part II. IPGRI-APO, Serdang, Selangor, Malaysia.
Eyzaguirre, PB and P Batugal (eds). 1999. Farmer participatory research
on coconut diversity: Workshop report on methods and field proto-
cols. IPGRI-APO, Serdang, Selangor, Malaysia.
Ikin, R and P Batugal (eds). 2004. Germplasm health management for
COGENT’s multi-site International Coconut Genebank. IPGRI-APO,
Serdang, Selangor, Malaysia.
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COCONUT GENETIC RESOURCES
Introduction
Coconut genetic diversity is essential to ensure sustainable coconut
production. This diversity is vital for breeding improved varieties and
hybrids which are high-yielding and possessing other traits which are
preferred by smallholder producers and adapted to biotic and abiotic
stresses. Unfortunately, most of the 38 member countries of the
International Coconut Genetic Resources Network (COGENT) do not
have, individually, a wide range of coconut genetic diversity. Breeding
programmes in some of these countries use a limited range of germplasm,
which may not be suitable or adequate to effectively achieve their breeding
objectives. Many of them are not fully aware of the characteristics of
many coconut accessions worldwide. This constraint has been partly
alleviated through the development and dissemination of COGENT’s
International Coconut Genetic Resources Database (CGRD). At present,
there are 1416 coconut accessions conserved in 25 COGENT member
countries. This collection is not exhaustive, as more varieties exist in
farmers’ fields which have recently been identified and characterized
under various COGENT-coordinated projects. While some of these are
described in the CGRD, the data contained therein do not sufficiently
describe the origin, history and morphological and agronomic
characteristics of the varieties; other relevant information like conservation
sites and global distribution are also non-existent. These data, if
incorporated, would be useful not only to coconut breeders but also to
other researchers, students and industry players who are working to
promote the conservation and use of coconut genetic diversity to benefit
smallholders.
Illustrated descriptions of coconut varieties were initially published
by a few authors such as Pruhdhomme (1906) and Liyanage (1958). In
their papers, a few full pages of drawings or photographs of coconut
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fruits of different shape and sizes are shown. In some documents related
to surveys, characterization or exploration of coconut germplasm, there
are also a few pictures and drawings describing various coconut varieties
(Whitehead 1966; Le saint et al. 1983; Sangare et al. 1984; Foale 1987;
N’Cho et al. 1988). However, such publications are limited in number.
The first catalogue of coconut germplasm entitled, ‘Coconut descriptors’,
was published in India in 1995 (Ratnambal et al. 1995). In this publication,
a variety is described using colour plates of its different parts and two
pages of textual information following standardized descriptors (IBPGR
1995). However, this book was mainly designated and written for
scientists and researchers, without any ethnobotanical, economical or
historical description of the varieties. The second volume of the publication
was published in 2001 and distributed in CD-ROM.
To address the situation, COGENT and the Centre de Cooperation
Internationale en Recherche Agronomique pour le Développement
(CIRAD), initiated the development of two catalogues: the Catalogue of
Conserved Coconut Germplasm and the Catalogue of Farmers’ Coconut
Varieties. The former contains textual and pictorial description of coconut
varieties conserved in genebanks of COGENT member countries, while
the latter describes coconut varieties that have been identified in farmers’
fields under the previous Asian Development Bank (ADB)- and the current
International Fund for Agricultural Development (IFAD)-funded ‘Poverty
reduction in coconut growing communities’ projects. The idea of making
these fully-illustrated catalogues as printed materials was approved in
the 2000 COGENT Steering Committee meeting held in Bangkok,
Thailand.
Since then, COGENT and CIRAD have been collaborating to develop
and publish these two high-quality catalogues. The objective of this effort
is not only to showcase as many referenced varieties as possible, but also
to provide comprehensive information (pictures and text) to help
stakeholders identify and select the appropriate coconut varieties either
for their breeding work or replanting programme. The information in
the catalogues is presented to make them attractive and understandable
to the general public while retaining their technical soundness to be
appreciated by scientists and researchers, thereby appealing to a much
wider spectrum of audiences.
In this catalogue, each variety is described using one-page picture
plate and one-page text, as detailed below:
Textual information
In the textual description (Annex 1), each variety is described following
the headings below:
• The international name and abbreviation of the variety;
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COCONUT GENETIC RESOURCES
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CHAPTER 7: Information, public awareness, institutional support and partnerships
the shape, colour and size of the inflorescence vary with the
number of female flowers and the stage of maturity;
5. Husked nuts. This picture is located at the top left of the page
next to the name of the variety, arranged as small, medium and
big. These pictures were included mainly because people, espe-
cially from the Northern Hemisphere, often know coconut only
as husked nuts. In addition, there is a strong genetic variation in
the size, the shape and the position of the three coconut ‘eyes’
that is not yet included in the IPGRI standard descriptors for co-
conut;
6. ‘Special’ picture. Oval-shaped, at the top right side of the plate,
this photo can show any additional, interesting or unique feature
of the variety (e.g. pink colour inside the husk, detail of inflores-
cence, special aspect of the young palm, ethnobotanical aspect,
etc) or could also show the whole crown of the palm.
This catalogue may not contain all of the varieties conserved in COGENT’s
member countries and countries participating in COGENT’s poverty
reduction project, but this certainly covers a vast majority of these
varieties. This catalogue is envisioned to serve the needs of researchers,
students, policy officers of national programmes and other players of the
coconut industry in general and help promote the coconut as a prime
economic commodity.
References
Bourdeix, R. 1999. Coconut varieties: Malayan Dwarf. In: COGENT
Newsletter 2:13.
Bourdeix, R, JL Konan and JP Labouisse. 2000. Coconut cultivars: The
Rennell Island Tall. In: COGENT Newsletter 3:10-11.
Bourdeix R, V Tuia, LM Fili and V Kumar. 2002. Coconut varieties of
‘Niu Kafa’. COGENT Newsletter 5:14-15.
Foale, MA. 1987. Coconut germplasm in the South Pacific Islands. ACIAR
Technical Report, Series No. 4.
Haile, NS. 1974. The quest for the mysterious coconut pearl. The Straits
Times Annual. pp 75-77, 159.
IBPGR. 1992. Descriptors for coconut. International Board for Plant Ge-
netic Resources, Rome. 61pp.
Konan JL, YP N’Cho, A Kullaya, R Bourdeix and P Batugal. 2000. West
African Tall. In: COGENT Newsletter 4:13.
Le Saint, JP, M de Nuce de Lamothe and A Sangare. 1983. The dwarf
coconut palms at Port Bouet (Ivory Coast) Part II. Sri Lanka Green
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COCONUT GENETIC RESOURCES
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CHAPTER 7: Information, public awareness, institutional support and partnerships
Identification
More than 30 types of Red Dwarfs are referenced worldwide. Some of them look very
similar to the Malayan type: Red Dwarfs from Sri Lanka, from Chowgat in India, from Nias
in Indonesia, from Chumpon in Thailand, and even from Cuba. Molecular analysis
techniques will help to determine if these Red Dwarfs are identical or not.
Other Red Dwarfs can be easily distinguished from the Malayan type. CRD bears pear-
shaped fruits with paler orange colour. Some Red Dwarfs from the Pacific region produce
bunches with long peduncle and numerous smaller fruits having a more intense red-
orange colour (such as the Tahiti Red Dwarf). Fruits of some other Red Dwarfs from Papua
New Guinea have a tit or lug at the bottom.
Other topics
The MRD is tolerant to the Lethal Yellowing Disease (LYD) of Jamaica (Romney 1980) but
sensitive to the LYD found in Tanzania and Ghana.
References
Nuce de Lamothe, MW de and F Rognon. 1977. Les cocotiers nains à Port Bouët (Côte
d’Ivoire). I. Nain Jaune Ghana, Nain Rouge Malaisie, Nain Vert Guinée Equatoriale et
Nain Rouge Cameroun. Oléagineux 32:367- 375.
Romney, DH. 1980. Agronomic performance of ‘Malayan Dwarf’ coconut in Jamaica.
Oléagineux 35 (12):551-554.
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COCONUT GENETIC RESOURCES
Prepare double-ply fibre- About four to five meters Weave the double-ply
based ropes of double-ply rope are ropes following the
needed to produce a drawn pattern, using the
single dorrmat nails on the wooden
board as guides
Some samples of the Sew the mat horizontally Weave in the dye-
finished product and vertically to hold it coloured double-ply
together ropes according to the
design drawn on the
board
1
By Vo Van Long, Coconut Scientist, Oil Plant Institute of Vietnam (OPI), Ho Chi Minh City,
Vietnam; pictures courtesy of Ajith Samarajeewa, Research Officer, Coconut Research Institute
(CRI), Lunuwila, Sri Lanka
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CHAPTER 7: Information, public awareness, institutional support and partnerships
Animal-shaped doormat is just one of the many attractive products that can be
made from the coconut fibre. It is used either for wall decoration or as a mat placed
at the entrance of a house to wipe dirt from the shoes or slippers. In Vietnam and Sri
Lanka, these animal-shaped doormats are very popular among local and foreign
tourists and are mostly made for export.
Packaging
Finished products are usually packed in cartons or boxes for delivery to customers.
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COCONUT GENETIC RESOURCES
Introduction
COGENT firmly believes that one of the best ways to promote the
conservation of coconut is by promoting its domestic consumption,
particularly its use in food and related food products. It is a fact that in
many countries, coconut is widely used as an ingredient in food. Indeed,
for certain countries, a meal would not be complete without the spicy
curry or sweet dessert that has coconut milk as its main ingredient.
Coconut oil
Coconut oil has been a lifesaver for many people. The health and
nutritional benefits derived from coconut oil are unique and compelling.
Medium chain triglyceride, a fraction of coconut oil has been identified
as an important, medically efficacious food. Indeed, diets for critically ill
children, premature infants and hospitalized patients contain medium
chain triglycerides as principle source of fat. Coconut oil, when used in
usual diets containing all classes of fat, proves to be hypocholesterolaemic.
Chemically, coconut oil is rich in fatty acids of 12 carbons or less, classified
as Medium Chain Fatty Acids (MCFA).
Coconut water
Coconut water is a health drink with proven therapeutic benefits for
those who are prone to high blood pressure. Because of its high glucose
and fructose content, coconut water serves as a good source of
intravenous fluid, and could also be used for oral rehydration.
Traditionally, some people drink coconut water not only to prevent
the formation of but also to facilitate the removal of kidney stones. In
some rural areas, drinking coconut water is also practiced to cure measles.
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Coconut milk
Coconut milk has soothing and cooling effects on the body. It also
stimulates growth of hair. Some people use either raw or cooked coconut
milk as routine hair treatment or maintenance. Hair will become stronger;
thicker, shinier and generally healthier.
Coconut flour
Coconut flour has great value as an ingredient in health food. When
mixed with wheat flour, it supplies the amino acids which are lacking in
the latter. Coconut flour also has a high-fibre content which helps facilitate
the removal of harmful toxins from the body by promoting regular bowel
movement (Rethinam 2003)
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COCONUT GENETIC RESOURCES
and further subdivided by country from where the recipe came from.
Each recipe entry will contain the following:
1. The country where the recipe was documented;
2. The local name of the dish and its English translation, if any;
3. The author or documenter of the recipe;
4. The specific place in the country where the dish is popular;
5. A picture of the dish;
6. The ingredients needed; and
7. The instructions for cooking or preparing the dish.
References
Rethinam, P. 2003. Health and nutritional aspects of coconut. 155-167
In: KI Vasu and PK Thampan (eds). Coconut for rural prosperity.
APCC, Jakarta, Indonesia. 299p.
KI Vasu and PK Thampan (eds). 2003. Coconut for rural prosperity.
APCC, Jakarta, Indonesia. 299p.
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CHAPTER 7: Information, public awareness, institutional support and partnerships
Country: Malaysia
Local Name: Sup Ayam Herba
English Name: Herbal Chicken Soup in Coconut Pot
Ingredients:
1 big coconut
400 g chicken
5 g yuk chuk (Chinese herbs)
5 g Sa Sam (Chinese herbs),
5 g boxthorn fruit or qi zi (Chinese herbs)
1/4 tsp salt
500 ml boiled water
Cooking Instructions:
1. Dehusk the coconut; cut the top cleanly to open and drain away all the
coconut water.
2. Put all ingredients into the coconut with its meat intact.
3. Cover the top and tie with string.
4. Steam over low fire for 2 hours.
5. Serve while hot.
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Country: Thailand
Local Name: Phaneang Mu
English Name: Pork Curry with Vegetables
Ingredients:
1 cup sliced pork 1 ½ tablespoons red curry paste*
¾ cup coconut milk 1 cup coconut cream
1 ½ tablespoons fish sauce 1 tablespoon sugar
3 pcs Kaffir lime leaves, finely cut 1 green chili pepper, cut into thin strips
5-6 basil leaves 1 cup coconut palm heart, sliced
Cooking Instructions:
1. Pound all the Red Curry paste ingredients together until the resulting mixture is
smooth.
2. Using a wok or pot, cook the coconut cream over low heat until oil appears. Add
red curry paste and stir for 2 minutes.
3. Add the sliced pork. Stir 2-3 times. Add fish sauce, sugar and coconut milk. Bring
to a boil. Cook for 5-10 minutes.
4. Put in green chili pepper. Remove from heat. Top with kaffir lime leaves and basil
leaves when serving. Serve with cooked rice or bread.
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Country : Tanzania
Local Name : Kashata
English Name : -
Ingredients:
1kg white sugar
½ kg grated coconut
2 cups water
Cooking Instructions:
1. Mix sugar with water.
2. Boil sugar-water mixture until sugar melts.
3. Add the grated coconut to the sugar solution. Stir for 30–40 minutes until
solution thickens.
4. Spread the mixture evenly on an aluminium tray lined with oil.
5. While still hot, cut the mixture into bite-size pieces of desired shapes.
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COCONUT GENETIC RESOURCES
Country: Vietnam
Local name: Banh Dau Do
English name: Red Bean and Coconut Pudding
Ingredients:
150g of red beans
3/4 cup of concentrated milk
300g of coconut water
140g of corn flour
1 1/3 of cups sugar
30 strips of white agar
Cooking Instructions:
1. Mix corn flour, fresh coconut water and concentrated milk together.
2. Soak agar for half hour. Drain.
3. Wash and boil red beans in 6 cups of water.
4. Simmer over low heat for 1½ hours until beans are soft.
5. Remove cooked beans from boiling water. Set aside boiled water.
6. Boil agar in 5 cups of of the red beans water until agar is dissolved.
7. Add sugar, then gradually pour in corn flour mixture. Keep stirring until
the mixture thickens.
8. Put in the red beans and bring to boil. Pour the boiled mixture in a basin.
9. Put in refrigerator.
10. Serve chilled.
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Introduction
The purpose of this paper is to summarize the past and present
international efforts in coconut research and discuss future perspectives
on international coconut research that would serve the needs of the
commodity and those who depend on it.
Historical perspective
The first recorded coconut research was conducted 250 years ago in
Indonesia, where a description of coconut cultivars was recorded in
literature. A brief chronology of coconut research over the last century is
given in Table 1.
The possibility of an international initiative in coconut research was
first discussed with the Asian and Pacific Coconut Community (APCC)
at its meeting in Bangkok in May 1989 and in a subsequent
APCC-sponsored workshop in Singapore in September 1989. The
attention of the international agricultural research community had been
drawn to coconut because of its importance as a multi-purpose tree, both
a local and an export commodity, grown largely by smallholders - often
in fragile environments where there were few prospects for other crops.
Coconut has been characterized by a ‘stop/start’ approach to research
that was under-funded at national, regional and international levels. The
need for international cooperation in coconut research to bring together
a critical mass of expertise and resources to solve some of the problems
facing the industry has long been recognized amongst coconut producing
countries, researchers and development agencies. Several proposals were
put forward in various international fora between 1960-1980, all of which
lapsed.
The Consultative Group on International Agricultural Research
(CGIAR) recognized the importance of coconut as the smallholder crop
most in need of international attention, in its review of priorities and
strategies in 1996. The long-term nature of coconut research, the history
of discontinuity and lack of adequate support in funding, the prospects
of a high return on research investments and the likely distribution of
benefits to smallholders and consumers in developing countries made
coconut a suitable target for international support.
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COCONUT GENETIC RESOURCES
Constraints analysis
The constraints to coconut production were identified as: 1) Low
productivity of many trees due to age, and poor nutrition; 2) the lack of
success in many replanting programmes; 3) fluctuating productivity, due
to climatic and other events; 4) losses due to pests and diseases including
several lethal diseases of unknown etiology; and 5) inefficient handling
and processing with limited added-value products for national and export
markets.
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CHAPTER 7: Information, public awareness, institutional support and partnerships
the productivity of the crop and the coconut-growing lands and add
value to the commodity after harvest.
Implementation options
The advantages and disadvantages of various options for providing
additional international support were considered. The options included:
1) additional support for national programmes; 2) an international
coconut research center; 3) international/regional coconut research
networks; 4) an international coconut research council; and 5) a coconut
R&D consortium. These options included ones that could be incorporated
within the CGIAR system and others that could be conducted under
international auspices outside the CGIAR system.
TAC recommendations
TAC recommended to the CGIAR in 1990 that coconut be included in
the CGIAR portfolio of activities. TAC farther recommended that the
research areas that warranted international efforts were within the fields
of: 1) germplasm collecting, conservation, evaluation and enhancement;
2) the control of pests and diseases; 3) the productivity and sustainability
of coconut-based systems; 4) efficiency and added value in post harvest
handling and utilization; and 5) socioeconomic issues, especially the
factors that influence farmers’ participation in rehabilitation and
replanting coconut land.
With regard to implementation arrangements, TAC recognized a clear
need for networks with a strong enabling component to fund research.
TAC also recommended that an international germplasm research unit
be established in Asia, in association with an international network on
genetic resources, possibly managed by the International Plant Genetic
Resources Institute (IPGRI). The programme of an international network
for coconut genetic resources was developed at an international workshop
held in Cipanas, Indonesia in 1991 (IBPGR 1992).
With regards to the important problems needing to be addressed
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COCONUT GENETIC RESOURCES
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Future perspectives
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COCONUT GENETIC RESOURCES
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Conclusion
The lessons learned from past experience in international coconut efforts
are that the critical elements for the success of future international
initiatives are: 1) Identification of a set of priority problems of global
significance; 2) provision of an enabling financing mechanism by which
research on the priority problems may be undertaken by scientists
worldwide; 3) provision of international auspices for a program of genetic
resources collecting, conservation, exchange and utilization; and 4)
provision of a means for continuity of funding in coconut research.
Much progress has been made in international coconut R&D efforts
over the past decade. This has been the result of careful planning and
meaningful consultations. There is a need now to plan with similar care
for the next decade, determine a focused set of priorities and expected
outcomes, strengthen the partnerships and strategic alliances necessary
to achieve these outcomes, and mobilize the necessary finance, from
national and international resources.
Future national and international R&D efforts will then have a high
chance of success in alleviating the constraints affecting the coconut
industry today, contribute to increasing the long term profitability and
sustainability, and increase the competitiveness of coconut, for the benefit
of all who depend on the ‘Tree of Life’.
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References
CGIAR. 1992. CGIAR priorities and strategies. CGIAR Technical
Advisory Committee Secretariat, FAO, Rome.
COGENT. 2000. COGENT Newsletter Nos. 1-3. IPGRI-APO, Serdang,
Selangor, Malaysia.
Persley, GJ. 1992. Replanting the tree of life: Towards an international
agenda for coconut palm research. CAB International,
Wallingford, UK. 156p.
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COCONUT GENETIC RESOURCES
Introduction
The possibility of an international initiative in coconut research was first
discussed with the Asian and Pacific Coconut Community (APCC) at its
meeting in Bangkok in May 1989 and at a subsequent meeting in
Singapore later that year. At about the same time, the Technical Advisory
Committee (TAC) was tasked by the Consultative Group on International
Agricultural Research (CGIAR) to undertake a consultative process to
identify: 1) priority problems that affect coconut production; 2) those
problems that could be addressed through research; 3) new approaches
to address those researchable issues that are international in character
and beyond the scope of any one country to resolve. The priorities
identified for international effort were: 1) germplasm collecting,
conservation, evaluation and enhancement; 2) pests and diseases control,
especially the lethal diseases; 3) improving productivity and sustainability
of coconut-based systems; 4) increasing efficiency and added value in
post harvest handling and utilization; and 5) addressing socioeconomic
issues, such as the factors that influence farmers’ choices in replanting
coconut land.
On 8-11 October 1991, the International Board for Plant Genetic
Resources or IBPGR (renamed International Plant Genetic Resources
Institute or IPGRI in 1992) organized an international workshop on
coconut genetic resources in Cipanas, Indonesia involving leading
coconut researchers from 15 countries. The workshop participants
recommended that an international coconut genetic resources network
be established with IBPGR serving as the executing agency for Phase I
(first five years) of this network and nominated the initial members of
the Steering Committee. Based on the results of the TAC consultation
process, the CGIAR decided to include coconut in its research portfolio
in 1992 after studies indicated that international support and global
coordination of research in coconut is essential to make it more productive
and beneficial to smallholder coconut farmers. The CGIAR and TAC
recognized that international support to coconut research was needed
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Capacity development
To strengthen the coconut research capability of COGENT member
countries, the COGENT Secretariat and IPGRI have organized 39 country
need assessment missions and conducted 41 workshops and meetings
involving 994 coconut researchers to share information and technologies,
discuss issues and common problems and opportunities and how to
address them; conducted 40 training courses involving 765 participants
from 41 countries; supported 274 research and training/capacity building
activities in 30 countries; and led the establishment of the Global Coconut
Research for Development Programme (PROCORD).
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Germplasm evaluation
In 2001, COGENT and BUROTROP supported APCC in conducting a
survey on the performance of coconut hybrids and varieties, and farmers’
varietal preferences in 10 coconut producing countries. The results showed
that: 1) there are no universal hybrids, with each hybrid having their
specific niches where it performs well; 2) hybrids performed better than
traditional varieties under adequate rainfall and good soil conditions; 3)
under optimum growing conditions and management, the coconut
hybrids tested could produce up to 5 tonnes of copra per hectare per
year compared to the 1-2 tonnes obtained from traditional varieties; and
4) farmers were not interested in high yields per se but also in other
characteristics such as low input-requiring varieties and varieties with
special characteristics for producing high-value products.
In 1999-2004, COGENT conducted a CFC-funded hybrid
multilocation trial involving three African countries (Côte d’Ivoire, Benin
and Tanzania) and three Latin American and Caribbean countries (Brazil,
Mexico and Jamaica) to identify suitable hybrids and varieties for
smallholders. Each of the six countries compared six common multi-site
hybrids produced and shipped from Côte d’Ivoire with their local hybrids.
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The imported test materials were four Dwarf x Tall and two Tall x Tall
hybrids which have been proven to have good yield potential in other
separate trials. Included in each country location trial are 4-8 promising
local hybrids/ varieties as local control. The Government of Portugal
funded a similar project involving the evaluation of the same six multi-
site hybrid controls and four local hybrids in Mozambique. This brought
to 38 the total number of test hybrids/ varieties (including both the local
and imported hybrids) being evaluated, making this project the most
comprehensive coconut hybrid trial worldwide.
The most important initial result of the project is the identification of
19 early bearing and potentially high-yielding new coconut hybrids.
Nineteen out of the 38 coconut hybrids in the first trial started to flower
and produce fruits in Brazil, Jamaica and Mexico in 2.5-3.0 years after
planting compared to the seven years it would normally take for the
traditional Tall varieties to reach the fruiting stage. On the other hand,
flowering was not observed in the hybrids planted in Benin, Côte d’Ivoire
and Tanzania during the same period. These results suggest that the
drought in Africa and the generally drier conditions in that region
compared to those in Latin America and the Caribbean had a negative
effect on the early flowering of the hybrids. This germplasm x environment
interaction could be verified with the vegetative and reproductive plant
measurements, and biotic and abiotic data to be gathered and analyzed
in the next five years. Based on the yield projection of the 19 fruiting
hybrids on their fourth year, they have the potential to produce up to 5
tonnes of copra (dried kernel) per hectare per year at the peak of
production (at 10-12 years) compared to the 1-2 tonnes of copra produced
by the traditional coconut varieties. The results of this hybrid evaluation
and other hybrid performance observations around the world are
presented in the COGENT publication entitled, ‘Coconut Hybrids for
Smallholders’ (Batugal et al. 2005).
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Conclusion
The establishment of COGENT addressed the need for an internationally
coordinated research programme on coconut genetic resources in support
of the smallholder coconut farmers and the coconut industry. To ensure
the sustainability of the programme, the member countries agreed to
reciprocal access to germplasm, information and technology; sharing of
resources to implement agreed activities; and to collaborate in solving
common problems and promoting common opportunities. The public
and private sectors have high expectations for COGENT to help improve
coconut profitability in a sustainable manner and to provide benefits to
the coconut smallholder farmers. These expectations have been partly
achieved with many substantive achievements of COGENT since its
establishment 12 years ago. Support of partner institutions and donors is
strong. However, in the final analysis, the success of COGENT will
depend mostly on the commitment and political will of the member
countries to help themselves.
References
Batugal, P, V Ramanatha Rao and C Bong, editors. 1998. Promoting
multi-purpose uses and competitiveness of the coconut. Proceedings
of workshop held in Chumpon Thailand on 26-29 September 1996.
IPGRI-APO, Serdang, Malaysia. 190p.
Batugal, PA and V Ramanatha Rao (eds). 1998. Coconut breeding. Papers
presented at a Workshop on Standardization of Coconut Breeding
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Bangladesh
1. Bandabila Coconut Community, Bandabila, Jessore
2. Chandrapara Coconut Community, Chandrapara, Barisal
3. Banchte Shekha (BS) Coconut Community, Jamira
India
4. Ariyankuppam Commune Coconut Farmers Association,
Ariyankuppam
5. Pallikkara Community Coconut Development Centre, Pallikkara
6. Vayalar Community Development Project, Vayalar, Kerala
Sri Lanka
7. Thuthipiritigama Entrepreneurship Development Society,
Thuthipiritigama, Hettipola
8. Womens Savings Effort, Wilpotha
9. Dodanduwa Womens Collective, Dodanduwa
Indonesia
10. Kelompok Tani Kelapa Harapan Wori, Wori, Wori District, Minahasa
Regent
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Philippines
13. Malapad Integrated Livelihood Cooperative, Malapad, Real, Quezon
14. Bahay Patol Agrarian Reform Beneficiaries Multi-purpose
Cooperative, Caliling, Cauayan, Negros Occidental
15. Linabu Coconut Planters Association, Linabu, Misamis Oriental
16. Fleischer Estate Integrated marketing Cooperative, Old Poblacion,
Maitum, Saranggani (associated CBO)
Vietnam
17. Hung Phong/Phong Nam Coconut Community, Hung Phong and
Phong Nam, Giong Trom District, Ben Tre Province
18. Xuan Dong Coconut Community, Xuan Dong District, Tien Giang
Province
19. Tam Quan Nam Coconut Community, Tam Quan District, Binh Dinh
Province
Fiji
20. Tukavesi Development Association, Tukavesi
21. Belego Multiracial Farmers Association, Belego, Wailevo
22. Cicia Women’s Group, Cicia Island
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Background
Coconut farmers, 96% of whom are smallholders (tending less than 4
hectares), are suffering because of declining farm productivity and
unstable markets for their traditional coconut products which are copra
(dried kernel) and coconut oil. On the average, coconut farmers earn a
gross income of about US$150-$200 per hectare per year which income
is below the poverty line. The problems include declining yields and farm
productivity, pests and diseases, poor farm management practices, lack
of improved varieties, inappropriate processing technologies, inadequate
access to information and markets and lack of understanding of the
socioeconomic problems of the coconut farmer. Inadequate funding and
institutional support to enable the research community to effectively
address the major problems and opportunities of resource-poor
smallholder coconut farmers have also contributed to the suffering.
In the past 12 years, the Bureau for the Development of Research on
Tropical Perennial Oil Crops (BUROTROP) and the Asian and Pacific
Coconut Community (APCC) have identified several of these major
constraints of the coconut growing countries, but due to inadequate and
discontinuous funding, they could only address these problems in limited
ways. Since its establishment by the International Plant Genetic Resources
Institute (IPGRI ) 14 years ago, the International Coconut Genetic
Resources Network (COGENT) has effectively implemented its mandate
to promote the conservation and use of coconut genetic resources to
increase the income of smallholders. However, its mandate has been
limited to genetic resources conservation and use. Cognizant of these
constraints, in May 2000, BUROTROP in collaboration with COGENT,
presented a proposal for the establishment of a global coconut research
programme along the commodity chain approach (from production to
consumption) which was favourably received during the meeting of the
Global Forum on International Agricultural Research (GFAR) in Dresden,
Germany. Subsequently, national programme representatives from 34
coconut producing countries who attended the International Coconut
Conference/COCOTECH meeting in Chennai, India in July 2000
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Organizational structure
As agreed by the four organizations and their stakeholders, PROCORD
will operate through a Coconut Stakeholders’ Group, a Coconut Support
Group, a Coordinating Committee and six Technical Working Groups.
The membership and mandates of these groups are described below.
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Programme coordination
APCC, CIRAD and COGENT may decide to rotate the coordination of
PROCORD. The coordinating organization will provide the Secretariat
and chairs the Coordinating Committee. COGENT coordinated
PROCORD from 2002 to 2004. At the 13th COGENT Steering Committee
meeting on November 2004, the three organizations approved the
continuation of the coordination of PROCORD by COGENT.
Since PROCORD is being coordinated by COGENT, the COGENT
Coordinator also serves as the coordinator of the programme and is
responsible to the Coordinating Committee; IPGRI through COGENT
provides the Secretariat and administrative support for the programme.
The six programme areas have been assigned to APCC, CIRAD and
COGENT as their lead responsibilities: COGENT: 1) Genetic resources
and improvement, 2) Socioeconomics and policy support; CIRAD: 3)
Agronomy and coconut-based farming systems and 4) Crop protection;
and APCC: 5) Processing and 6) Marketing.
Although two research areas are assigned to each institution, this
does not mean that each organization will be limited in mandate only to
these assigned research areas in PROCORD. Their total mandate and
research activities are decided by their policy bodies, i.e. Steering
Committee and IPGRI for COGENT; Board of Administrators for CIRAD
and the Session for APCC. Any of the three organizations can thus
conduct research in any of the six areas, consistent with the decisions of
their respective policy bodies. However, for PROCORD, their main
responsibility will be to coordinate the two research areas they are
assigned to lead. They should thus lead in the development and
coordination of PROCORD projects in their assigned research areas,
based on the identified priorities of the Stakeholders’ Group and the
Coconut Support Group which will be fleshed out by their respective
Technical Working Groups and endorsed by the Coordinating Committee.
They could submit proposals and serve as executing agencies for these
projects for their respective organizations. The proposed PROCORD
Coordinating Committee will thus integrate and coordinate the work in
the six areas to ensure that there is no unnecessary duplication of work,
and that there is complementation and synergy of activities and sharing
of resources.
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Meetings
PROCORD will adopt the COCOTECH meetings as one of the venues of
its stakeholders meetings and may have other complementary meetings
as needed. The COCOTECH meets annually with representatives of
government and non-governmental organizations and the private sector
from 20-30 countries attending.
The CGIAR Coconut Support Group meets annually to review
activities and priority research areas for coconut. The CGIAR Coconut
Support Group annual meetings serve as the annual meetings of the
PROCORD Coconut Support Group.
APCC, CIRAD and COGENT have joint meetings annually. Any of
these joint meetings can be arranged so that the PROCORD Coordinating
Committee can meet annually. This way, the Coordinating Committee
could meet annually using existing resources.
Each of the three organizations can arrange for their respective
Technical Working Groups to meet in coordination with their
organizations’ annual meetings or allied functions.
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Marketing
To enlarge and diversify markets and promote consumption and use by:
• Conducting market studies to identify regional and global markets
for major traditional and non-traditional coconut products
(demand, prospects, consumer preference, utilization pattern)
• Developing market channels and strategic marketing techniques
for coconut products
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510
CHAPTER 8: COGENT’s regional network reports
Chapter 8
COGENT’s regional
network reports
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Introduction
The South Pacific Island nations are collectively one of the major
producers and exporters of copra. Copra and coconut products continue
to be important commodities for both the local and export markets,
earning for these countries substantial foreign exchange. Coconuts are
also important for household food security and the many uses of coconuts
make them an essential part of life in the Pacific. Moreover, the
environmental benefits of coconut palms are vital in maintaining the
fragile ecologies of the Pacific Islands. Coconut trees prevent soil and
beach erosion, recycle soil nutrients, act as windbreaks to prevent wind
erosion and reduce the effect of typhoons and/or cyclones, and also
provide shade to reduce soil temperatures.
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Fiji: Trials are being conducted to compare the performance of the local
Fiji Tall with the hybrid progenies of MRDxRT, MRDxRIT, MYDxRT
and MYDxRIT.
PNG: Sixteen (16) hybrids are under evaluation for yield, early bearing,
and high oil content.
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Future directions
The impact of the previously discussed projects, both regional and national,
has been significant. Most of the coconut germplasm of the Pacific have
been collected, characterized and conserved. The ICG-SP has been
established and some threatened germplasm have been transferred to
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India
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Gemplasm collected as embryos from Bangladesh and Sri Lanka were cultured in
vitro for obtaining plantlets for planting in the ICG-SA (Table 1).
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The mother palms of these selected varieties were conserved in situ and
paint-marked for identification. So far, 5600 seednuts have been
propagated and sold from these nurseries. CBO members have also
planted 8800 new seedlings bought from these nurseries and those
provided directly by CPCRI.
To supplement their farm incomes, 759 CBO members are currently
involved in intercropping trials; 370 are engaged in livestock production;
and 615 are into the production of diversified high-value coconut-based
products. Of the total 1744 CBO members engaged in various income
generating activities, 43% are women. CPCRI observed that these
interventions have increased farmers’ incomes by three to five times based
on the average pre-project farm earnings of US $ 200/year.
To fully help the farmers, CPCRI sought the assistance of various
partners, including: the Krishi Vigyan Kendra, Kerala Agricultural
University, Department of Animal Husbandry, State Department of
Agriculture, MS Swaminathan Research Foundation, National Bank for
Agricultural Rural Development, District Cooperative Bank State
Planning Board through the Kudumbashree Project and the Coconut
Development Board. Assistance extended by these partners ranged from
providing counterpart funding to providing resource persons for training
and assisting in marketing.
Sri Lanka
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Bangladesh
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communities with seed revolving funds in cash (US$ 7000) and in kind
(machineries and equipment).. So far, a total of 300 farmer-members
have benefited from small loans provided by the microcredit system for
intercropping, livestock rearing and processing of diversified high-value
coconut products. Loans have also been given to members for replanting
old and unproductive coconut trees. As of August 2004, the total loan
released to the three communities was US$ 6743 and the initial amount
recovered was US$ 1547, or 23% repayment rate.
Integral to the project is the improvement of coconut genetic diversity
in the pilot communities. To address this, nine community-managed
seedling nurseries have been established in the pilot sites involving 300
farmers. Seedlings raised and propagated in these nurseries came from
seednuts of 18 high-value and high-yielding local farmers’ varieties that
had been previously identified through coconut diversity fairs. The mother
palms of these identified varieties were conserved in-situ and paint-marked
for identification. In addition to maintaining and selling high-quality
coconut seedlings, the nurseries also produce quality planting materials
for intercrops. So far, 5100 seednuts have been propagated and sold by
these nurseries, from which 3473 seedlings have been bought and planted
by the CBO members on-farm.
To augment farm incomes, CBO members were encouraged to engage
in various income generating interventions. Currently, 133 farmers are
producing high-value coconut products like ropes, doormats, coconut
oil and coconut candy; 115 farmers are into intercropping; while 178
farmers are raising chickens, ducks, goats and cattle under coconut.
Recent surveys by BARI indicated that these interventions have increased
farmers’ incomes by three to five times based on their average pre-project
earnings of US $ 12/year from their small plots.
BARI partnered with various public and private sector agencies in
the country to effectively put in place a support system for the project.
These include: the Directorate of Agricultural Marketing, Krishi Katha-
Agricultural Information Services, The Daily Star Magazine, Department
of Cooperative, Directorate of Livestock, Directorate of Agricultural
Extension, Bangladesh Livestock Research Institute, Directorate of
Livestock, Northwest Bangladesh Crop Diversification Project, Regional
Agricultural Research Stations of BARI at Barisal and Jessore, On-Farm
Research Division of BARI in Khulna, Department of Social Welfare at
Khulna, Barisal and Jessore, and the Grameen Bank. Assistance provided
by these partners included financial and technical support and advice,
provision of resource persons for training, planting materials and animal
stocks, public awareness and marketing.
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Pakistan
Varietal selection
Although plantations of coconut have been in existence in Karachi for a
long time, most of these are scattered and there is no organized plantation
with known varieties. Efforts to plant coconut in organized plantations
started in the late 1950s when groves were established in government
farms, which continued for some time but with very little success.
However, the survey conducted by national and international agencies
proved that coconut can be successfully grown in the coastal belt of Sindh
and Balochistan Provinces with proper management and constant
irrigation as the areas are prone to drought and temperature fluctuations.
The farmers in this area obtained seednuts from different countries, mainly
from Sri Lanka, Bangladesh, India and Malaysia but very little or no
attention was given to the specific variety, only that these are either Talls
or Dwarfs. In the late 1970s, varieties with known cultivar names and
characters were imported from Sri Lanka for evaluation. The activities
were later organized by Pakistan Agricultural Research Council (PARC).
After the evaluation, more varieties and hybrids were imported from Sri
Lanka to be raised in government nurseries for distribution to farmers.
The Sindh Forest Department was also involved in these activities,
establishing their own plantation in forestlands near Thatta.
Results of the evaluation carried out by the two institutions
recommended Tall varieties for planting as these were more tolerant to
biotic and abiotic stresses and produce bigger nuts with better copra
quality. Some farmers, though, prefer Dwarf varieties as they bear more
fruits which are mainly used for coconut water and are easily marketed.
However, Pakistani coconut farmers do not like the Sri Lanka hybrid as
it was found to be easily damaged by stress due to conditions prevalent
in the country. The MAWA hybrid, on the other hand, impressed some
growers but could not be cultivated in larger areas because of similar
problems.
Orchard management
Orchard management activities focused on finding the most effective
and efficient fertilizer combination and requirement to grow coconuts
productively. It was a general impression that the coconut does not
require much fertilization and the growers used only Farmyard Manure
(FYM) in households as well as field plantations. Later on, trials
conducted proved that application of inorganic fertilizers improved the
health of palms and decreased flower and fruit drop resulting in higher
nut yield with better quality. The results of these trials proved that
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COCONUT GENETIC RESOURCES
application of 250 g N, 100 g P and 200 g K per plant was beneficial and
economical for improving growth, bearing and nut quality. Addition of
FYM also proved beneficial for soil improvement particularly in slightly
saline soils.
Irrigation was another important aspect under orchard management
as areas planted to coconut received very low rainfall and frequently
faced drought. Furthermore, many of these areas are characterized by
sandy soils. To address this situation, it was recommended that crops be
irrigated weekly during summer and fortnightly during winter.
It is a common practice in Pakistan to keep orchards clean and not to
grow any intercrops after the trees start bearing fruits. Recent studies,
however, concluded that it was possible to grow vegetables as intercrops
in a coconut farm as they did not affect the growth of the palms as earlier
believed and it was also proven to be a profitable venture to augment
farmers’ incomes.
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Introduction
The Southeast and East Asian (SEEA) region produces more than half of
the world’s coconuts (Table 1), and among the members of the
International Coconut Genetic Resources Network (COGENT), the
Philippines and Indonesia have the largest collection of coconut
populations (Table 2). Other countries composing the Southeast and East
Asia sub-network are China, Malaysia, Myanmar, Thailand and Vietnam
(Annex 1).
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Of the 11.9 million hectares of coconut grown in the world, eight million
hectares, or about 70% is in Southeast and East Asia, with Indonesia
and the Philippines together accounting for 90% of this hectarage. The
Philippines has the largest coconut collection in the world and remains
to be the foremost exporter of coconut oil in the world, while Indonesia
has the greatest potential of having the widest coconut diversity in the
region and possibly in the world. Thailand and Vietnam grow coconut
only in some of their provinces and that multiple uses of coconut from its
various parts (i.e. husk, shell and water) appear to be the main occupation
of coconut entrepreneurs, particularly catering to the export markets.
Malaysia is reportedly losing 3000 palms a year due to urbanization and
replacement with oil palms. However, coconuts still play a crucial role in
the lives of the Malaysian coconut farmers since Malaysia imports about
400 000 nuts a year for local consumption alone. On the other hand,
China is slowly developing its coconut industry, its Hainan Island is home
to some very interesting cultivars, specifically those that thrive in cold
temperatures. Efforts to develop the island’s coconut industry offer great
prospects of marketing coconut and coconut by-products to mainland
China.
Identification of the coconut varieties suitable for products with good
market value is a must in genebank management. In 1992, the
International Plant Genetic Resources Institute (IPGRI) through COGENT
initiated the development of the International Coconut Genetic Resources
Database (CGRD) in collaboration with the Centre de Cooperation
Internationale en Recherché Agronomique pour le Développement
(CIRAD). The database aimed to document and disseminate passport
and characterization data on conserved germplasm, facilitate international
information exchange and promote access to coconut varieties for the
breeders and other users. The CGRD software enables members of
COGENT to input their own data, access other members’ data and share
information.
Meanwhile the Coconut Data Management (CDM) software
developed by CIRAD makes it possible to print cartographic
representation of the palms in each field, enabling the display and
modification of palm characteristic on a map. The software was
introduced in a training course held in Montpellier in 2002. Included in
the course is the introduction of a microsatellite kit for analyzing the
DNA profiles of coconut germplasm in existing germplasm collections.
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Philippines
The Philippine Coconut Authority (PCA) genebank in Zamboanga is
considered to be one of the most important germplasm repositories of
local and foreign coconut ecotypes in the world, where 224 coconut
accessions are being maintained. Eleven accessions are of foreign origin,
such as the West African Tall (WAT), Rennel Island Tall (RIT), Gazelle
Peninsula Tall (GPT), Markham Valley Tall (MVT), Vanuatu Tall (VTT),
Karkar Tall (KKT), Malayan Red Dwarf (MRD), Malayan Yellow Dwarf
(MYD), Equatorial Guinea Green Dwarf (EGD), Sri Lanka Green Dwarf
(SGD) and Aromatic Green Dwarf (AROD). The introduced materials
make it possible for the country to participate in the planned global
coconut-breeding programme of COGENT.
Like other countries, Tall varieties dominate the areas planted to
coconut. The major Tall populations grown in the country are Laguna
(LAGT), Bago-Oshiro (BAOT), Baybay (BAYT), Makapuno (GUZT), San
Ramon (SNRT), Tagnanan (TAGT) and Hijo Tall (HJT). The Dwarf
varieties include Catigan (CATD), Tacunan (TACD), Kinabalan (KIND)
and Aromatic (AROD).
Apart from the 11 introduced accessions, 22 are hybrid/line
collections. The first three locally-produced hybrids, namely PCA 15-1
(CATD x LAGT), PCA 15-2 (MRD x TAGT) and PCA 15-3 (MRD x BAYT),
were mass-produced using the assisted pollination breeding technique
for the planting/replanting programme of the PCA. Other hybrids
produced which were also registered with the National Seed Industry
Council (NSIC) are PCA 15-4 (CATD x TAGT), PCA 15-5 (CATD x
BAOT), PCA 15-6 (CATD x PYT), PCA 15-7 (MRD x PYT), PCA 15-8
(TACD x BAOT), PCA 15-9 (TACD x TAGT), PCA 15-10 (TACD x LAGT),
PCA 15-11 (TACD x WAT), PCA 15-12 TACD x RIT), PCA 15-13 (MRD
x LAGT), PCA 15-14 (MRD x BAOT) and PCA 15- 15 (CATD x BAYT).
These hybrids were selected based on their outstanding and stable yield
performance as well as economic profitability (Santos et al. 2000).
Registered local Dwarf and Tall varieties are CATD, TACD, BAYT, TAGT
and BAOT. The local Tall Baybay is recommended as planting material
while promising varieties like TACD, CATD, AROD, MRD, RIT and
Baybay are used for seednuts propagation.
In an attempt to try new breeding methods to produce an open-
pollinated variety (OPV), the PCA is introducing the Syn Var 001,
nicknamed ‘GMA Coconut Variety’, or technically known as Genetically
Multi-ancestored Farmers Coconut Variety, which is considered as the
hybrid of hybrids. The base populations are the F1 hybrids originating
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COCONUT GENETIC RESOURCES
from six Tall populations, which were found to possess good general
combining ability. GMA is an open or cross-pollinating population of
highly heterozygous individual palms. Farmers can use the succeeding
seed generation for subsequent planting and this will make the coconut
farmers more self-reliant in the production of their own hybrid seednuts.
Recently, two Philippine Dwarf varieties, Galas Green Dwarf (GALD)
and Tacunan Green Dwarf (TACD) passed the international standards
set by the C&A Products Co., Ltd. of Thailand for young tender coconut.
These were found to be better than the famous Thai aromatic varieties
Nam Hom (HOM) and Nam Wan (WAN). A recent addition to the PCA
genebank is a rare coconut called ‘Tutupaen’ or ‘Tupa’, whose shell is so
thick that it’s almost as thick as its meat. Nuts from the ‘Tutupaen’ are
not consumed due to superstitious belief that once eaten, the shell will
become brittle. Debris from the ‘Tupa’ tree is also buried for the same
reason (Calub 2002). ‘Tutupaen’ nuts are used solely for ‘Tupa’, a local
throw-and-hit game wherein the players involved try to hit the opponent’s
nut while it is rolling. The first nut to crack or break is declared the loser
regardless whether it is the roller’s or the hitter’s.
Indonesia
The Indonesia Coconut and Other Palmae Research Institute (ICOPRI)
was established to lead the country towards coconut industrialization.
Survey and collection of coconut genetic resources were done in several
parts of the country, including swampy and drought areas. New Dwarf
and Tall ecotypes were introduced to increase the genetic variability of
the present collection. ICOPRI has so far collected 165 coconut accessions
conserved in four of its experimental stations.
All collected germplasm are conserved in several field genebanks,
but since this method was found to be quite expensive, especially the
field maintenance (Novarianto et al. 1994), cryopreservation technology
is being considered as a feasible alternative to conserving the country’s
coconut germplasm. Characterization of germplasm had been done
intensively at the Mapanget experimental garden as a component of the
coconut improvement programme in Indonesia. The first four best
populations namely, Nias Yellow Dwarf (GKN) from Nias Island (North
Sumatera), Tenga Tall (DTA) from Tenga Village (north Sulawesi), Palu
Tall (DPU) from Bangga Village (Central Sulawesi) and Bali Tall (DBI)
from Pulukan Estate (Bali Island) had been chosen.
Most of the coconuts grown in the country are Tall types. Dwarf
types are not commonly planted in large areas, although Nias Yellow
Dwarf was used as a female parent in a breeding programme and planted
in 1856 ha. The coconut hybrid PB 121 from Port Bouet, Côte d’Ivoire
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has also been introduced in the country sometime in 1975. In 1984, the
government released local hybrids KHINA-1 (GKN x Tenga Tall or DTA0,
KHINA -2 (GKN x Bali Tall or DBI) and KHINA-3 (GKN x Palu Tall or
DPU). Likewise, Tall x Tall hybrids were released, namely KB-1 (32 x
32), KB-2 (32 x 2), KB-3 (32 x 83) and KB-4 (32 x 99).
Indonesia’s coconut genetic resources include ‘unique coconuts’ as
these have unusual morphological traits. Kopyor, the soft-endosperm
coconut which is comparable to the Makapuno of the Philippines, has
long been used in food preparation. Other unique varieties include
Takome and Santongbolang Tall (having remarkable number of fruits
per bunch, Igoduku Tall (oblong-shaped), Palapi and Dodo Tall (big fruit
and nut), Mamuaya Tall (round fruit with very thin, reddish husk), Shinta
Red Dwarf (large bole), Kapal and Pini Tall (pink at the base of the fruit)
and Suckering Coconut (suckers grow up from the surface near the base
of the trunk). These ‘unique’ coconuts are among the 40 accessions
identified during an exploration activity in the Moluccas Islands, East
Nusa Tenggara, West Nusa Tenggara and North Sulawesi, areas that
have large coconut diversity (Novarianto et al. 2000).
Tall coconut palms are the source of young tendernuts, which is
gaining popularity in Southeast Asia. This is mainly due to the fact that
the bulk of plantations are growing mainly Tall palms for copra making
and oil extraction (Rethinam 2002). However, the cultivation of Dwarf
varieties is more appropriate for tendernuts since it is easy to harvest the
nuts with little damage. The Salak Dwarf and Nias Green Dwarf are the
two coconut varieties recommended by Indonesia for tendernut
production. Indonesia and Thailand have also initiated collaborative
research on coconut palm sugar production to improve the technology
for village-level commercial production and to evaluate coconut
germplasm for high sap and sugar production.
Vietnam
Coconuts provide the primary source of income to the thousands of
farmers, especially those living in the Mekong River Delta in the south
and along the coastal areas in the Central region where coconut planting
started several years back. Little attention is given to coconut as most of
the coconut farmers prefer intensive farming involving other commodities
(i.e., fish, shrimps, swine, fruit crops, etc.) (Long 1994). Coconut is widely
used for culinary purposes and some of it is converted into copra and oil
for industrial use while the rest is exported.
Coconut research activities in Vietnam were officially initiated in 1980
with the establishment of the Institute for Research on Oils and Oil Plants,
now known as the Oil Plants Institute of Vietnam (OPI). Coconut
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Thailand
Coconut is an important subsistence crop in Thailand. Over 200 000 farm
families are directly or partially dependent on the coconut industry for
their livelihood. The total area under coconut is about 376 000 ha, which
are predominantly planted with local Tall even though high yielding
coconut varieties have been released to farmers since 1982.
Coconut research in Thailand started in 1960 with the establishment
of the Sawi Horticultural Experiment Station in Amphoe Sawi,
Chumphon Province, later renamed Chumphon Horticultural Research
Centre (CHRC), Thailand’s main coconut research centre. Over 50
coconut accessions are conserved at CHRC, which include local and
exotic varieties. The first hybrid experiment was set up in 1975. The
hybrids performed very well under local conditions and a coconut
seedgarden was established simultaneously to keep pace with the demand
for planting materials. The first variety was Sawi Hybrid No 1, a cross
between MYD and WAT, otherwise known as MAWA hybrid. The hybrid
was released to farmers in 1982. Two more hybrids, Chumphon Hybrid
No. 60, a cross between Thai Tall and WAT (THT x WAT) or Maphrao
Yai and West African Tall, and Chumphon Hybrid No.2, a cross between
Malayan Yellow Dwarf and Maphrao Yai, were recommended in 1987
and 1995, respectively. Chumphon 60 (named to commemorate the Thai
King’s 60th birthday) has medium to big size fruit. Potential copra yield
per fruit is about 260-300 g. Chumphon 2 has a medium-sized fruit,
relatively uniform fruit size and is more precocious than Chumphon 60.
Copra yield per nut is about 250 g. Most farmers who had planted hybrid
varieties preferred Chumphon 2.
Coconut products such as coconut cream and young tendernut have
become important export products of Thailand, becoming the largest
exporter of coconut cream to the United States, earning for the country
over 2 billion baht (about US$ 40 000 000) each year. Young tendernut is
another product gaining popularity, the most famous of which is the
Thai Aromatic Green Dwarf (Nam Hon) variety, which is known for its
unique sweet and aromatic (“pandan”) water. Other varieties include
the Thung Khled and Pathiu. The quality and shelf life of fresh nuts have
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COCONUT GENETIC RESOURCES
China
The Coconut Research Institute of the Chinese Academy of Tropical
Sciences (CRICATAS) introduced into China a host of elite varieties from
Vietnam, Thailand, Cambodia, the Philippines, Malaysian and Cote
d’Ivoire (e.g., West African Tall, Rennel Island Tall), most of which have
been planted in the Institute’s seedgarden in Hainan Island. They have
also conducted R&D studies on fertilizer application, nutrition diagnosis,
cultural systems, intercropping, nut processing and coconut milk
preservation.
The country’s breeding programme is ongoing, mainly based on MYD
x LT crosses. In addition, high-yielding varieties like the MAWA, Thai
Green Dwarf and MYD x LT have been deployed. Collecting of indigenous
and exotic varieties is continuing to enlarge the stock of parental materials
for breeding and screening for cold tolerant varieties. To build up its
human resources on coconut genetics research, China continues to send
technical staff for related training in other COGENT countries.
Malaysia
In Malaysia, coconut ranks the fourth most important crop in terms of
area planted, after oil palm, rubber and rice, respectively. In 1981, the
total area planted to coconut was 409 348 hectares, but in 1995 it
drastically declined to 248 380 hectares, which represent about 5% of
the country’s total agricultural land area. As in the rest of the countries
in the Asia and Pacific region, smallholders, with an average farm size
of 2.8ha, dominate coconut production in the country, producing about
93% of the total coconuts in the country. It is estimated that a total of 90
000 farm families are involved in coconut production.
The local demand for the crop is mainly in the form of fresh nuts,
coconut oil and processed products such as desiccated coconut and
coconut cream. Despite the shrinkage of the area under coconut, the
country is still a net exporter of coconut products. In 1995, exports were
valued at about RM 165.2 million (US$ 43.5 million), primarily in the
form of coconut oil, desiccated coconut, copra and fresh whole nuts.
Imports of coconut and related products, on the other hand, amounted
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Constraints
1. Insufficient varieties that meet product standards for processing into
high-value products, also lack of efficient processing techniques and
product diversification;
2. Prevalence of pests and diseases, especially Brontispa (in Vietnam
and China) and Cadang-cadang (in the Philippines); and
3. Lack of available funds for conducting research and development,
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COCONUT GENETIC RESOURCES
Opportunities
1. The ADB/IFAD-assisted coconut-based poverty reduction projects
of COGENT offer a good venue to pursue all regional activities;
2. Vietnam adopted a programme to improve the farming systems
common in the Mekong Delta from rice monoculture to diversified
crops with high value and marketable agricultural crops; and
3. China is aiming to produce coconut milk juice to meet the huge
demand in the country and the international market.
References:
Baudouin, L, R Bourdeix, F Bonnot, CH Hamelin and A Rouziere. 2000.
COGENT establishes an international coconut genetic resources
database (CGRD). COGENT Newsletter 3:1-2.
Calub, DJ. 2002. Do you know that? COGENT Newsletter 6:10.
Carpio, CB. 2003. Sub-network report for Southeast and East Asia. Paper
presented at the 12th COGENT Steering Committee Meeting, 10-12
Nov. 2003, Merida, Mexico.
Long, VV. 2002. Reducing poverty in coconut growing communities in
Vietnam. COGENT Newsletter 6:14.
Novarianto, H and Miftahorrachman. 2000. Unique coconuts of
Indonesia. COGENT Newsletter 4:14-15.
Rethinam, P. 2002. Poverty Reduction through tendernut production:
COGENT to develop tendernut varieties/hybrids. COGENT
Newsletter 5:7.
Santos, GA, RL Rivera and SM Rivera. 2000. Collection and evaluation
of coconut cultivars and conservation of genetic resources.
Research, Development and Extension Branch, Philippine Coconut
Authority (RDEB-PCA). Annual Report 2000. P. 2.
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543
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Economic importance
The coconut is an important source of vegetable oil and income for many
communities in about 22 African countries. It also plays an important
role in environmental sustainability of the farming systems of the often
fragile ecosystems of the tropical coastal belt.
Africa accounts for only about 5% of the global area and production
of coconuts (Persley 1992). According to statistics from Asian and Pacific
Coconut Community (APCC 1990), the area under coconuts in Africa is
estimated to be about 396 000 ha (Persley 1992). However, data compiled
during the First and Second African Coconut Workshops organized by
the Bureau for the Development of Research on Tropical Perennial Oil
Crops (BUROTROP) in 1991 and 2000 suggest that the area under coconut
cultivation in Africa could be about 774 000 ha (Table 1). The largest
coconut producers in Africa include Tanzania, Madagascar,
Mozambique, Ghana, Côte d’Ivoire and Kenya. The crop is cultivated
under diverse climatic and edaphic conditions mainly by small-scale
farmers, accounting for about 95% of the total production.
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COCONUT GENETIC RESOURCES
Benin 10 Madagascar 82
Cameroon 4 Mauritius 3
Cape Verde 3 Mozambique 95
Comoro 30 Nigeria 10
Côte d'Ivoire 50 Sao Tome Principe 37
Guinea 10 Senegal 5
Ghana 43 Seychelles 19
Guinea 15 Sierra Leone 3
Guinea Bissau 25 Somalia 15
Kenya 42 Tanzania 252
Liberia 7 Togo 14
Total for Africa 774
The average coconut yield in the region is quite low (about 600 kg copra/
ha) but comparable to the world’s average. According to the findings of
two workshops organized by BUROTROP in 1991 and 2000 (Kullaya
1992; BUROTROP 2000), the major and most common production
constraints that account for the low coconut yields and productivity in
Africa include:
1. Presence of unfavourable weather conditions, in particular
inadequate rainfall coupled with unfavourable distribution in a
number of producing countries like Benin, Cape Verde, Kenya
and Tanzania;
2. Lack of improved planting materials that are adapted to local
conditions. The predominant planting materials in the different
countries are the local Tall coconut populations, which somehow
might be adapted to prevailing local conditions, but generally they
have low yield potential;
3. Incidence of serious pests in some countries, in particular:
• Oryctes beetle-The pest occurs in most African coconut
growing countries. Although efforts to control another species,
O. rhinoceros with Baculovirus have been successful in various
parts of the world, results of such biological control measures
under field conditions in countries like Tanzania and
Seychelles have been less successful;
• Coreid bug (Pseudotheraptus wayi) in East Africa appears to
be far more destructive than the West African species, P.
devastans;
• Eriophyid mite (Aceria guerreronis);
• Rodents, especially in Comoro and Seychelles where two
species are reported to occur; and
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International Multilocation Variety Trial - National Institute for Agricultural Research (INRAB), Ongoing
Benin
- Marc Delorme Station/CNRA, Côte d'Ivoire
- MARI (Tanzania)
- EMPRESA Brasileira de Pesquisa, Agropecuaria
(EMBRAPA) Brazil)
- Coconut Industry Board, Kingston, Jamaica;
- Instituto Nacional de Investigacion Forestales
Agricoles y Pecuario (INIFAP), Mexico
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COCONUT GENETIC RESOURCES
In 1996, the Coconut Genetic Resources Network for Africa and Indian
Ocean (CGRN-AIO) was formally established to promote collecting,
conservation, characterization, evaluation, use and exchange of coconut
genetic resources in the region, as sub regional network of COGENT. It
also aims to accelerate the development and use of improved coconut
varieties and hybrids. Kenya, Madagascar, Mozambique, Seychelles and
Tanzania in East Africa, and Benin, Côte d’Ivoire, Ghana and Nigeria in
West Africa are the current members of the regional network.
Future activities
Taking into consideration the relatively high annual population growth
rate in Africa, the demand for vegetable oil is expected to increase
progressively in the coming decades. Appropriate actions must therefore
be taken to enable countries in Africa and the Indian Ocean meet this
increasing demand for vegetable oil.
During the Second International Coconut Workshop for Africa titled,
‘Helping the African Coconut Farmer into the 21st Century’ organized
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Table 3. List of germplasm accessions covered by the agreement for the ICG–AIO
Source
International Cultivar Name Abbreviation (Code)
(Country of Origin)
1. Andaman Giant Tall AGT India
2. Andaman Ordinary Tall ADOT India
3. Baybay Tall BAYT Philippines
4. Cambodia Battambang Tall KAT09 Cambodia
5. Cambodia Koh Rong Tall KATIO Cambodia
6. Cambodia Ream Tall KAT07 Cambodia
7. Cambodia Sre Cham Tall KAT08 Cambodia
8. Cambodia Tuk Sap Tall KAT02 Cameroon
9. Cameroon Kribi Tall CKT Cameroon
10. Cameroon Red Dwarf CRD Cameroon
11. Catigan Green Dwarf CATD Philippines
12. Comoro Moheli Tall CMT Comoro
13. Equatorial Guinea Green Dwarf EGD Equatorial Guinea
14. Gazelle Peninsula Tall GPT Papua New Guinea
15. Kappadam Tall KPDT India
16. Karkar Tall KKT Papua New Guinea
17. Kinabalan Green Dwarf KIND Philippines
18. Laccadive Micro Tall LMT India
19. Laccadive Ordinary Tall LCT India
20. Madang Brown Dwarf MBD Papua New Guinea
21. Malayan Green Dwarf MGD Malaysia
22. Malayan Red Dwarf MRD Malaysia
23. Malayan Tall MLT Malaysia
24. Malayan Yellow Dwarf MYD Malaysia
25. Markham Valley Tall MVT Papua New Guinea
26. Mozambique Tall MZT Mozambique
27. Niu Leka Dwarf NLAD Fiji
28. Palu Tall PUT Indonesia
29. Pilipog Green Dwarf PILD Philippines
30. Rangiroa Tall RGT French Polynesia
31. Rennell Island Tall RIT Solomon Island
32. Rotuman Tall RTMT Fiji
33. Solomon Island Tall SIT Solomon Island
34. Sri Lanka Green Dwarf PGD Sri Lanka
35. Sri Lanka Tall Ambakelle SLT02 Sri Lanka
36. Tacunan Green Dwarf TACD Philippines
37. Tagnanan Tall TAGT Philippines
38. Tahitian Red Dwarf TRD French Polynesia
39. Tahitian Tall TAT French Polynesia
40. Takome Tall TKT Indonesia
41. Tonga Tall TGT Indonesia
42. Ternate Brown Dwarf TBD Indonesia
43. Thailand Green Dwarf THD Thailand
44. Thailand Tall Ko Samui THT04 Thailand
45. Thailand Tall Sawi THTO I Thailand
46. Tonga Tall TONT Tonga
47. West African Tall Akabo WAT03 Côte d’Ivoire
48. West African Tall Mensah WAT04 Côte d’Ivoire
49. West African Tall Ouidah WAT06 Benin
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References
APCC. 1990. Coconut statistical yearbook 1989. Asian and Pacific
Coconut Community, Jakarta, Indonesia.
BUROTROP. 2000. Proceedings of the 2 nd International Coconut
Workshop for Africa, 12-18 May 2000, Mombassa, Kenya.
Child, R. 1974. Coconuts. Longman and Green, London.
Dransfield, J. 1989. Voanioala (Areioideae; Cocoeae; Butiinae). A new
palm from Madagascar. Kew Bulletin 44:191-198.
Eden-Green, SJ. 1995. History, world distribution and present status of
lethal-yellowing-like diseases of palms. Pp. 9–25. In: Proceedings of
an International Workshop on Lethal Yellowing-Like Diseases of
Coconut, November 1995, Elmina, Ghana.
Harries, HC. 1977. The Cape Verde region (1499 to 1549): Key to coconut
culture in the Western Hemisphere? Turrialba 27: 227-231.
Harries, HC. 1978. Lethal yellowing diseases of coconuts in global
perspective. Philippine Journal of Coconut Studies 3:1-4.
Harries, HC. 1981. Germination and taxonomy of coconut. Annals of
Botany 48: 873-883.
Harries, HC. 1990. Malesian origin for a domestic Cocos nucifera. Pp. 351-
357. In: P Baas, K Kalkman and R Geesink (eds). The plant diversity
of Malesia. Kluwer Academic Publishers, Dordrecht, The
Netherlands.
Kullaya, AK. 1992. State of coconut production in Africa. BUROTROP,
Montpellier, France. 62p.
Kullaya, A, L Masumbuko, R Sallu and S Sinje. 2002. Assessment of
genetic variation in East African Tall coconut sub-populations from
Chambezi coconut germplasm collection using Random Amplified
Polymorphic DNA (RAPD) markers. Paper presented during the 2nd
National Workshop on Plant Genetic Resources and Biotechnology,
6-10 May 2002, Arusha, Tanzania (unpublished).
Persley, GJ. 1992. Replanting the tree of life: Towards an international
agenda for coconut palm research. Redwood Press Ltd, Melksham.
156p.
Purseglove, JW. 1972. Tropical crops. Monocotyledons. Longman,
London.
Rohde, W, A Kullaya, J Rodriguez and E Ritter. 1995. Genome analysis
555
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Introduction
The coconut (Cocos nucifera L.) is a very important crop in Latin America
and the Caribbean (LAC) for both cash and subsistence. It is not
indigenous to the Americas; it was introduced from the old world. The
first introductions originated from Cape Verde (West Africa) to the
Spaniola Island (now Haiti and Dominican Republic) in the Caribbean
(Bruman 1944; Harries 1977). Introductions to the west coast occurred
from the Solomon Islands around 1569 and from the Philippines to Mexico
in various occasions between 1571 and 1821 (Smith 1970; Zizumbo et al.
1993). Coconut was present in Panama from pre-Columbian times but
its origin and introduction date is unknown (Zizumbo and Quero 1998).
It was brought to the Americas for the establishment of plantations and
the fruit was used primarily for the production of wine and secondarily
for fresh consumption. Wine production from coconut was forbidden
and hence, from the second half of the 17th century to the second decade
of the 20th century the use of the fruit for fresh consumption became the
primary use. Then, during the 1920’s, copra became the main product
from coconut (Zizumbo et al. 1993). Nowadays, the trend is towards
product diversification.
Coconut is cultivated in every continental land from Brazil to Mexico
and in the Caribbean islands. Currently it is grown on about 500 000 ha,
or about one-twentieth of the coconut area in the Asia Pacific. The main
producers are Brazil (over 200 000 ha) and México (about 160 000 ha) in
the continent and Jamaica (14 000 ha) in the Caribbean. It is also abundant
in the Florida State in the USA, but for ornamental purposes.
Unfortunately, there are many problems with coconut cultivation
and industry, and most of them are common in every LAC country: (a)
use of low-yielding varieties; (b) ageing of palms; (c) losses due to diseases
and pests; (d) adverse climatic conditions; (e) inadequate management
practices; (f) stagnation and/or declining prices of products; (g) under
utilization of the crop and limited diversity of products; and (h) unstable
557
COCONUT GENETIC RESOURCES
markets.
The problems (a) to (c) are directly related to the features of the
presently cultivated palms, hence there is a lot of interest in research
related to germplasm and in particular the identification of genotypes
resistant to the phytoplasma-associated disease lethal yellowing (LY).
The LY is currently the most worrying problem of the coconut cultivators.
Problems (f), (g) and (h) are particularly related to copra production and
can be approached by promoting utilization of by-products and product
diversification. Problem (d) is generally beyond human control. However,
in the case of hurricanes that unfortunately occur every year, in the
Caribbean region in particular, the use of coconuts that can resist strong
winds can be very useful. Then again, this is a germplasm-related
approach. In the case of problem (e), it is very likely that neglect of
plantations may result from the effect of the other problems; therefore, if
they are properly solved, farmers would be interested in investing in their
plantations.
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Hurricane tolerance
Jamaica is in the hurricane zone and over the years, hurricanes have
had a significant effect on the industry. The MayPan is more resistant to
windstorm than the Malayan Dwarf and starting with late generation
Fiji-Malayan cultivars, some progress is being made in producing a palm
possessing a thick trunk, early bearing, good yield stability and LY
resistance in tandem with good windstorm tolerance. In 2002, in the
Yucatan coast in Mexico, hurricane Isidoro fell large numbers of coconuts.
Analyses of data showed significant differences on the percentage of
palms of different genotypes that were affected: PT ecotypes 5%, Atlantic
Tall (AT) 35%, MYD x AT hybrid 27%, MYD x PT hybrid 34% and MYD
over 50% (CICY 2005, unpublished).
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COCONUT GENETIC RESOURCES
Germplasm characterization
In order to obtain the most out of the available germplasm in LAC and
other locations, it is very important to characterize them using different
techniques. The most powerful tool currently available for this purpose
is microsatellite markers. A kit of such markers was developed by Centre
de Cooperation Internationale en Recherche Agronomique pour le
Developpement (CIRAD, France) jointly with COGENT (Baudouin and
Lebrun 2002). Additional techniques such as morphological
characterization (Harries 1981) can be of great practical importance. An
immediate application of these techniques is to properly define the identity
of genotypes of interest for LY resistance screening within the known
germplasm diversity, as well as bringing in new genotypes from Asia.
Search for uncharacterized populations within the Pacific coasts of
Central and South America could also be initiated in a similar fashion as
it has been done before in Mexico (Zizumbo et al. 1993; 1999; 2002). The
initial selection of populations on the LAC Pacific coasts can be supported
with morphological characterization technique. Both the characterization
of newly discovered Pacific populations and the selection of Asian
genotypes can be supported by the use of microsatellites markers to assess
the genetic distance to already known and characterized LY resistant
genotypes.
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Plant management
At the time of the LY outbreak in 1961 in Jamaica, research was conducted
in improving management for the Jamaica Tall cultivar as well as for
new LY resistant cultivars. Research initially concentrated on the use of
fertilizer, tillage, methods of managing bearing trees with different
incropping patterns and rat control. Great progress was made including
the development of a water-proof rat bait which was subsequently used
by the local farmers and in some other Caribbean countries (CIB 2005,
unpublished). When new varieties were produced, a new range of
experiments was needed to determine the best planting methods, most
desirable spacing, weed control, fertilizer and intercropping patterns.
Pioneering work was done on the use of herbicides in coconut cultivation
and routine herbicide recommendations were developed and adopted
by farmers in Jamaica and elsewhere (CIB 2005, unpublished). In
addition, technology has been developed on biofertilizer application for
Atlantic Talls in Mexico. The advantages of using biofertilizer are its low
cost and ease of application.
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References
Azpeitia, A, JL Chan, L Sáenz and C Oropeza. 2003. Effect of 22(S),23(S)-
homobrassinolide on somatic embryogenesis in plumule explants of Cocos
nucifera (L.) cultured in vitro. J. Hort. Sci Biotech. 78:591-596.
Baudouin, L and P Lebrun. 2002. The development of a microsatellite kit
and dedicated software for use with coconuts. Burotrop Bulletin.
17:16-20.
Been, BO. 1981. Observations on field resistance to lethal yellowing in
coconut varieties and hybrids in Jamaica. Oléagineux 36:9-11.
Been, BO. 1995a. Integrated pest management for the control of lethal
yellowing: quarantine, cultural practices and optimal use of hybrids.
Pp 101-110. In: C Oropeza, FW Howard and GR Ashburner (eds).
Lethal yellowing research and practical aspects. Kluwer Academic
Publishers, Dordrecht, The Netherlands.
Been, BO. 1995b. Production and advantages of coconut hybrids. Pp 187-
194. In: C Oropeza, FW Howard and GR Ashburner (eds). Lethal
yellowing research and practical aspects. Kluwer Academic
Publishers, Dordrecht, The Netherlands.
Been, BO. 1995c. The Coconut Industry Board of Jamaica. Pp 225-228.
In: C Oropeza, FW Howard and GR Ashburner (eds). Lethal yellowing
research and practical aspects. Kluwer Academic Publishers,
Dordrecht, The Netherlands.
Bruman, HJ. 1944. Some observations of the early history of coconut in
the New World. Acta Americana 2:200-243.
Bustamante, M. 2002. Ron-Ron de la palma, Strategus aloeus. Palm’s Ron-
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570
CHAPTER 9: Country reports on status of coconut genetic resources research
Chapter 9
Country reports on
status of coconut
genetic resources
research
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CHAPTER 9: Country reports on status of coconut genetic resources research
South Asia
Status of coconut genetic resources research
in India
V Rajagopal1, PM Kumaran2, S Arulraj2 and V Arunachalam3
Director, 2Principal Scientists and 3Scientist, Central Plantation Crops Research Institute
1
Introduction
India, the world’s third largest producer of coconut, grows the crop in
four of its southern states: Kerala, Tamil Nadu, Karnataka and Andhra
Pradesh.
The crop is grown in wide range of agroclimatic and sociocultural-
economic conditions. Land area under coconut, primarily located at
latitude 23.830 N to 60 S and longitude 94.780 E to 600 E, is characterized
by ecosystems of high rainfall zones (Northeast) to regions with wide
differences in relative humidity (46% to 99%) and extremes of temperature
(40C to 350C). The management of the crop varies from monocropping
with sophisticated drip irrigation, to mixed gardening in home gardens
to wild stands in uninhabited islands. Planting density also vary - from
wide spacing of 150 palms per ha in some parts of Karnataka to highly
dense stands of nearly 400 palms per ha in the Lakshadweep islands.
The country’s coconut industry suffers from two main problems: Root
(wilt) disease, which is a major constraint crippling the coconut
production in central and southern districts of Kerala; and drought, as
the crop is mainly grown as rainfed crop or with limited irrigation. In
addition, Eriophyid mite has become a serious threat to coconut
cultivation in recent years. Price fluctuation for coconut and its products
is also another threat to coconut farmers.
India has a relatively well-developed coconut R&D network that
supports coconut farmers and the industry in general. The Central
Plantations Crops Research Institute (CPCRI) and many state agricultural
universities concentrate on research at the national and regional levels.
An All India Coordinated Research Project on Palms (AICRPP) plays a
crucial role in networking these organizations. The Coconut
Development Coir Board helps in implementing developmental
programmes on coconut and coir, in collaboration with the state
departments of agriculture, horticulture and oilseeds.
Genetic enhancement for crop productivity is an important activity
of the concerned research organizations, particularly by the CPCRI,
which spearheads coconut research and development in the country.
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COCONUT GENETIC RESOURCES
Collecting
CPCRI maintains the world’s largest coconut germplasm collection,
comprising of 86 exotic and 46 indigenous cultivars. The exotic collection
from 22 countries of South, Southeast Asia, Caribbean, the Pacific Islands
and Africa consist of 68 Talls, 16 Dwarfs, one semi-dwarf and one hybrid.
The indigenous collection, on the other hand, consists of 34 Talls and 12
Dwarfs. Sub-samples of these collections are also maintained at 10
different centres under AICRPP.
Under the ADB Phase 1 project of the International Coconut Genetic
Resources Network (COGENT), germplasm collecting was undertaken
from the three Indian Ocean islands of Seychelles, Madagascar and
Mauritius. Fifteen accessions were collected in the form of embryos. Under
the subsequent ADB Phase II project, eight accessions were collected from
Maldives and another eight accessions from the islands of Comoros and
Reunion. Eleven accessions from Bangladesh and four accessions from
Sri Lanka were later added to the germplasm holding.
Locally, under the National Agricultural Technology Project (NATP),
collecting within the country was intensified in recent years, with a focus
on Andaman and Nicobar Islands and the Lakshadweep islands.
Extensive surveys and collecting of coconut germplasm were also
undertaken in the states of Kerala, Orissa, West Bengal, Tamil Nadu,
Goa, Maharashtra and Assam. At present, the national coconut genebank
has been enriched with many new accessions native to India and the
Indian Ocean islands, putting the total collection at 313 accessions (221
indigenous and 92 exotic accessions).
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CHAPTER 9: Country reports on status of coconut genetic resources research
Off-shore quarantine
One of the main problems facing coconut importers is the risk of
introducing foreign pests and diseases into the country. Following are
some of the more prominent and potentially dangerous pests and
diseases: 1) Cadang Cadang viroid; 2) Tinangaja viroid disease; 3)
Coconut foliar decay virus; 4) Lethal yellowing caused by phytoplasma;
5) Red ring disease caused by nematode; and 6) Kalimantan wilt.
To prevent introduction and spread of these, CPCRI has established
an offshore station in the Andamans (The World Coconut Germplasm
Centre) where all exotic collections are planted. The palms are under
strict surveillance in the field for the occurrence of pests and diseases for
more than five years. Only nuts from healthy and disease free palms are
brought to the mainland for inclusion in the genebank.
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COCONUT GENETIC RESOURCES
Utilization
The germplasm obtained from India and foreign sources are being utilized
in the different breeding programmes of the country. Details of the
varieties and hybrids released for cultivation are given in Tables 2 and 3.
CGD palms in ‘hotspot’ areas of root (wilt) disease serve as a means
to evolve elite high-yielding planting materials tolerant to the disease in
the region. Khan et al. (2002) found that Fiji Tall was the most stable
variety among the six coconut varieties tested in three sites representing
different agroclimatic zones.
Four hybrids involving direct crosses between WCT and COD were
planted with four replications with six palms per plot in CPCRI under
rainfed condition. Tall x Dwarf hybrids produced significantly higher
cumulative nut yield, average nut yield and average number of female
flowers per year.
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COCONUT GENETIC RESOURCES
Legend: COD = Chowghat Orange Dwarf, WCT =West Coast Tall, LCT =Laccadive Ordinary Tall GBGD
= Gangabondom Green Dwarf, ADOT =Andaman Ordinary Tall, MYD =Malayan Yellow Dwarf, SSAT
= Straight Settlement Apricot Tall, ECT =East Coast Tall, MGD =Malayan Green Dwarf, MOD =Ma-
layan Orange Dwarf
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CHAPTER 9: Country reports on status of coconut genetic resources research
References
Arunachalam, V, BA Jerard, M Elangovan, MJ Ratnambal, SK Rizal and
V Damodaran. 2001. Unexploited diversity in coconut palm (Cocos
nucifera L.). Plant Genetic Resources Newsletter 127:39-43.
Khan, HH, M Elangovan, V Arunachalam, PTN Nambiar, RV Reddy,
KS Prasanna Kumar, DD Nagwekar, S Suresh, S Giridharan, C
Natrajan, KUK Nampoothiri and VA Parthsarathy. 2002. Stability
of coconut yield in multilocation trials. Pp. 300-302. In: P Rethinam,
HH Khan, VM Reddy, PK Mandal and K Suresh (eds). Plantation
crops research and development in the new millennium. Coconut
Development Board, Cochin, India.
Kumaran, PM, PK Koshy, V Arunachalam, V Niral and VA
Parthasarathy. 2000. Biometric clustering of coconut populations from
579
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580
CHAPTER 9: Country reports on status of coconut genetic resources research
South Asia
Status of coconut genetic resources research in
Sri Lanka
AD Samarajeewa1, CK Bandaranayake2, CS Ranasinghe3, JMDT Everard4, LK
Weerakoon5, WMU Fernando6 and S Senarathne1
1
Agronomists, 2Plant Breeder, 3Senior Physiologist, 4Senior Geneticist, 5Senior Tissue
Culturist and 6Former Head of Genetic and Plant Breeding Division, Coconut Research
Institute of Sri Lanka (CRISL), Bandirippuwa Estate, Lunuwila, Sri Lanka
Introduction
Coconut is the most widespread plantation crop in Sri Lanka, occupying
20% of the cultivated land area. The total extent under coconut cultivation
is approximately 443 000 hectares. About 65-70% of the land is confined
to the coconut triangle encompassing the Kurunegala, Gampaha,
Colombo and Puttalam Districts.
Coconut is essentially a smallholder crop, with 80% of smallholdings
ranging from 2-4 ha. Coconut is also grown in home gardens. Annual
coconut production in Sri Lanka fluctuates within the range of 2500 -
3000M nuts. Of the total production, 70% is being consumed locally and
the balance available for coconut-based processing industries. Per capita
consumption of coconut in Sri Lanka is about 115 nuts per annum, making
it one of the highest per capita coconut consuming countries in the world.
Coconut is grown widely under rainfed conditions and as a result
national production largely depends on the annual rainfall pattern. The
most widely grown coconut cultivar is ordinary Tall (typical). The
coconut breeding programme has been in operation since the inception
of the Coconut Research Institute (CRISL) in 1929. The local Tall, being
a predominantly out-breeding crop with a long generation interval, and
in the absence of a proven method of vegetative propagation, mass
selection and hybridisation have been the major tools used in coconut
breeding in the country. Genetic improvement of coconut varieties had
commenced in early 1940’s by crossing selected Sri Lanka Talls to produce
the improved cultivars Tall x Tall (CRIC 60). Subsequently, production
program was also initiated concomitantly which produced the Dwarf x
Tall hybrid (CRIC 61), first introduced in 1965. The first isolated seed
garden for the mass production of improved cultivar CRIC 60 was
established in 1955. The coconut biotechnology programme was initiated
at CRISL in early 1970’s. The Tissue Culture Research Programme was
also developed as a successful embryo culture technique for germination
of Dikiri Coconut, a high-priced soft endosperm coconut.
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COCONUT GENETIC RESOURCES
584
CHAPTER 9: Country reports on status of coconut genetic resources research
coconut descriptors have already been collected, they were not in a proper
database format. Therefore under this project, the data was submitted to
COGENT’s CGRD for rapid, reliable and efficient information storage
and retrieval to assist in the utilization of germplasm worldwide.
The catalogue comprises a pictorial description and a small resume
of coconut genetic resources conserved ex-situ at CRISL.
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COCONUT GENETIC RESOURCES
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CHAPTER 9: Country reports on status of coconut genetic resources research
587
COCONUT GENETIC RESOURCES
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COCONUT GENETIC RESOURCES
Constraints
Scarcity of Dikiri nuts from non-seasonal bearing palms was a major
constraint in propagating an adequate number of Dikiri plants. In a
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CHAPTER 9: Country reports on status of coconut genetic resources research
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COCONUT GENETIC RESOURCES
Activities conducted
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CHAPTER 9: Country reports on status of coconut genetic resources research
Constraints
Scarcity of Dikiri nuts was a major constraint in conducting experiments
with this particular cultivar. Thus, the number of Dikiri embryos allocated
per treatment was low. This could have contributed to the high variation
observed in some of the experiments. High palm-to-palm variation and
variation within a bunch is inherent to coconut. This factor also
contributes to high coefficient of variation in certain experiments which
593
COCONUT GENETIC RESOURCES
could some times mask the actual effect of certain treatments. High
contamination rates observed in certain experiments was also a problem
in evaluating the effects of various treatments. Due to heavy
contamination, some of the embryos had to be discarded. This resulted
in a reduction in the number of embryos available for evaluation.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Activities
To increase incomes of coconut farmers, CRI participated in COGENT’s
diversity-linked ‘Poverty reduction in coconut growing communities’
project, involving eight Asia Pacific countries. The project deployed and
tested four income-generating technologies on: 1) production and
marketing of high-value products from all parts of the coconut; 2)
intercropping cash and food security crop; 3) livestock raising and feed/
fodder production; and 4) establishment of community-managed seedling
nurseries. The project was implemented in three coconut growing
communities, namely Wilpotha, Hettipola and Dodanduwa. The project
involved 168 participants in production of high-value coconut products,
328 in intercropping and 197 in animal/fodder production.
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COCONUT GENETIC RESOURCES
South Asia
Status of coconut genetic resources research
in Bangladesh
SA Bhuiyan1, A Rashid1, Md Nazirul Islam2 and BC Sarker3
1
Former Directors, Horticulture Research Centre (HRC), Bangladesh
2
Senior Scientific Officer and 3Scientific Officer, Bangladesh Agriculture Research
Institute (BARI), Jessore, Bangladesh
Introduction
In Bangladesh, coconut is considered as a crop with high economic
importance because of its variety of uses. The crop is commonly grown
in homesteads following a unique farming system that makes effective
and efficient utilization of land. Many households, which are generally
smallholders, depend on the coconut for their livelihood as it provides
regular income to growers (Eyzaguirre and Batugal 1999). Bangladeshi
Typica is the coconut variety commonly grown throughout the country,
which takes about six to eight years to flower and bear fruits after planting
(Tabibullah 1976; Ahmed 1982 and Rashid et al. 1987). The Typica has
acceptable nut quality and yield consistency (Islam 2002). Bangladesh
Agricultural Research Institute (BARI) collected coconut germplasm from
home and abroad for research. Although, BARI recommended two
coconut varieties, BARI Narikel-1 and BARI Narikel-2, in 1996 for general
cultivation throughout the country, information on genetic diversity of
coconut of Bangladesh is meagre.
The southern part of the country contributes about 80% of total
production (BBS 2002). The national yield of coconut has been estimated
at 21 nuts/palm/year with a total production of 90 000 tonnes/year
from 30 000 ha planted to coconut (BBS 2002). Islam (2002) reported
that around 44% of production is consumed as tendernut and 40% as
mature nut for fresh consumption. Only 9% is processed in industries
while 7% is used for seedling purposes.
The maximization of income opportunities from coconut is being
hindered by the low productivity of coconut trees due to lack of diversified
uses, inadequate processing facilities and absence of community-based
organizations (CBOs) in coconut growing communities to establish village
level affordable processing units. Investing in village-level coconut
processing industries is considered risky because of inconsistent and low
nut production. However, in collaboration with the International Coconut
Genetic Resources Network (COGENT) of the International Plant Genetic
Resources Institute (IPGRI), some of these constraints are being overcome.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Table 1. Population name with geographical locations of identified sample sites for
in-situ characterization and collecting of coconut germplasms in Bangladesh
Location on
Accession Accepted
Population Accession coarse grid Latitude Longitude
size abbreviation
map
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COCONUT GENETIC RESOURCES
598
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599
COCONUT GENETIC RESOURCES
the farmers for various household uses were identified and listed. Different
products and by-products from coconut and their methods of production
as well as the cost-effectiveness of farm-household/ecosystem levels on
the utilization of products were documented. Farm activities linked to
coconut were also identified.
The study revealed that total earnings from one ecotype were estimated
at Tk 37 992 000 (US$ 641 027) per year. There were six other areas in
the country where similar activities were practised, generating total
earnings of about Tk 227 952 000 (US$ 3 846 164) per year. In addition,
other sources of income such as other crops, livestock, poultry, fish,
business earned for growers about Tk 55 354 (US$ 934)/year/ha. Hence,
deployment of coconut-based farming system (CBFS) at community level
would help alleviate poverty (Islam 2002a).
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CHAPTER 9: Country reports on status of coconut genetic resources research
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COCONUT GENETIC RESOURCES
Achievements
Despite the high potential of coconut in generating income and
employment, coconut smallholders in Bangladesh still suffer due to
declining yields and decreasing farm productivity. Thus, there is a need
to develop and disseminate improved high-yielding and adapted varieties.
Farmers who own varieties with special traits were encouraged to raise
seedlings of such varieties for planting in their own homestead as well as
for distribution to other farmers. Interested farmers started raising the
selected palms to meet the local demand. Dwarf types of natural hybrids
which are resistant to pests and diseases have been identified and selected
palms are being planted homesteads, especially for tendernut. Women
and youth participating in the BARI-COGENT collaborative projects in
Jessore and Jhenaidah districts are now earning around TK 40-50
(US$0.67-0.84) per day by making ropes and doormats, which they could
not have done two years ago. At least 66 palms have been identified in
different parts of the country with different outstanding attributes and
farmer-owners have been convinced to maintain these genotypes in their
homesteads. Community-managed nurseries have been started to raise
seedlings to increase income and productivity as well as to conserve
economically-important local ecotypes.
Conclusion
There is significant coconut diversity in Bangladesh and their effective
utilization can enhance the incomes of small-scale farmers. Introduction
and evaluation (both for adaptation as well as for economic feasibility)
of certain exotic germplasm such as Makapuno would not only enhance
local diversity but also help in improving the incomes of the coconut
growers.
At present, the establishment of a Coconut Research Institute is
urgently needed to sustain the achievements in germplasm collecting and
utilization. Introduction of affordable, village-level technologies for
processing coconut under the auspices of a CBO will empower
communities and improve the production and marketing of different
high-value products. At present, the infrastructure for research and
development on coconut is not strong enough to effectively utilize modern
production technologies. The potential seed multiplication garden at Ramu
in Cox’s Bazar District could be brought under research to maximize its
utilization.
References
Ahmed, KU. 1982. Gardener’s book on production and nutrition. Vol. 1
(1st ed.). Mrs Mumtaj Kamal, Bungalow 2, Farm Gate, Dhaka-15,
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COCONUT GENETIC RESOURCES
South Asia
Status of coconut genetic resources research
in Pakistan
MH Laghari1 and AH Solangi2
Director and 2Senior Scientific Officer, Horticulture Research Centre (HRC), Pakistan
1
Introduction
Coconut is considered as one of the most important crops of the tropics.
It has multiple uses and every part of the crop is used for a variety of
purposes. In the early 1970s, the coconut was hardly grown on a
commercial scale in Pakistan. Later on, the potential of coconut to become
an economically-important crop, primarily as a source of edible oil, was
realized. Thereafter, it was included in the national government’s
agricultural programme as a priority crop for large-scale production,
especially in the coastal areas of the country.
The climatic and soil conditions in the country are not very well suited
for coconut cultivation as it requires well-drained fertile soils with well-
distributed rainfall under hot and humid climate. In Pakistan, the coastal
belt is characterized by sandy as well as saline soils. The climate is arid
with very low annual rainfall, ranging from 50 to 300 mm, and with
temperature extremes. However, the area is humid enough and with
proper attention and management, the crop could be successfully grown.
The coconut is not indigenous to Pakistan. The seedlings produced in
nurseries came from nuts imported from other countries, most of which
had no or very little information on variety or specific characters. In
addition, varieties grown in the country are facing pest and disease
problems. As such, research efforts on coconut in the country can be
categorized under the following:
• Selection and dissemination of varieties suited to existing
agroecologies;
• Orchard management practices particularly related to irrigation,
fertilizer requirements and intercropping; and
• Control of pests and diseases.
Varietal selection
Although plantations of coconut have been in existence in Karachi for a
long time, most of these are scattered and there is no organized plantation
with known varieties. Efforts to plant coconut in organized plantations
started in the late 1950s when groves were established in government
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CHAPTER 9: Country reports on status of coconut genetic resources research
farms, which continued for some time but with very little success.
However, the surveys conducted by national and international agencies
proved that coconut can be successfully grown in the coastal belt of Sindh
and Balochistan provinces with proper management and constant
irrigation as the areas are prone to drought and temperature fluctuations.
The farmers in this area obtained seednuts from different countries, mainly
from Sri Lanka, Bangladesh, India and Malaysia but very little or no
attention was given to the specific varieties; the only thing that was
considered was whether these were Talls or Dwarfs. In the late 1970s,
varieties with known cultivar names and characters were imported from
Sri Lanka for evaluation. The varietal screening activities were later
spearheaded by the Pakistan Agricultural Research Council (PARC).
After this initial evaluation, more varieties and hybrids were imported
from Sri Lanka to be raised in government nurseries for distribution to
farmers. The Sindh Forest Department was also involved in these activities,
establishing their own plantation in forestlands near Thatta.
Results of the evaluation carried out by the two institutions
recommended Tall varieties for planting as these were more tolerant to
biotic and abiotic stresses and produced bigger nuts with better copra
quality. However, some farmers prefer Dwarf varieties as they bear more
fruits which are mainly used for coconut water and are easily marketed.
At the same time, Pakistani coconut farmers do not like the Sri Lanka
hybrid CRI65 as it was found to be easily damaged by stress conditions
prevalent in the country. The MAWA hybrid, on the other hand,
impressed some growers but could not be cultivated on larger areas
because of abiotic stresses.
Orchard management
Orchard management activities focused on finding the most effective
and efficient fertilizer rates for economic production. It was a general
impression that the coconut does not require much fertilization and
therefore, growers used only farmyard manure (FYM). Later on, trials
conducted proved that application of inorganic fertilizers improved the
health of palms, and decreased flower and fruit drop resulting in higher
nut yield with better quality. Results showed that application of 250 g N,
100 g P205and 200 g K20 per palm was beneficial and economical for
improving growth, bearing and nut quality. Addition of FYM also proved
beneficial, particularly for soil improvement in slightly saline soils.
Irrigation was another important aspect under orchard management
as areas planted to coconut received very low rainfall and frequently
faced drought. Furthermore, many of these areas have sandy soils. To
address this situation, it was recommended that crops be irrigated weekly
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COCONUT GENETIC RESOURCES
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COCONUT GENETIC RESOURCES
Introduction
Indonesia, being the world’s largest producer of coconut, considers the
crop as a national strategic commodity. Coconut is one of the primary
sources of income for most Indonesian farmers and is processed into
various products like vegetable oil, raw material for food, industry,
construction, medicine, cosmetic and oleochemicals. Total land area
planted to coconut is about 3.7 million hectares, with 97% of overall
production coming from smallholder farmers. However, in many regions
of the country, productivity is declining because of old, senile palms. To
address this situation, parental germplasm must be improved, new high-
yielding varieties must be planted and an effective hybridization
programme must be put in place.
In some regions in Indonesia, coconut genetic resources are under
threat of genetic erosion due to rapid change in land utilization, natural
calamities, urbanization and other economic and environmental
pressures. Recent studies have indicated that the rate of genetic erosion
is higher than the present conservation rate. To mitigate this, coconut
genetic resources conservation through exploration, collecting and
utilization must be undertaken.
Research on coconut palms was initiated during the Dutch colonial
period and formal research was institutionally started in 1911. This
involved collecting some coconut ecotypes in the surrounding areas of
Java. From 1926 to 1927, Dr Tammes, a coconut scientist, identified and
selected 100 high-yielding Tall palms from populations in the Mapanget
District of North Sulawesi, which were planted at the Mapanget
Experimental Garden of the Indonesia Coconut and Other Palmae
Research Institute (ICOPRI). After Indonesia gained independence in
1945, coconut research activities were continued by the government. From
1956 to 1961, the Government of Indonesia contracted the services of a
German FAO expert, to characterize, select and cross the coconut
germplasm previously collected by Dr Tammes, with the aim of producing
high-yielding hybrids.
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CHAPTER 9: Country reports on status of coconut genetic resources research
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COCONUT GENETIC RESOURCES
covered Moluccas, North and Central Sulawesi and West Nusa Tenggara.
Its objectives were:
1. To identify and characterize existing coconut populations;
2. To collect representative genetic materials for conservation;
3. To evaluate coconut germplasm ex situ; and
4. To submit generated data to the International Coconut Genetic
Resources Database (CGRD) and submit the same to the Cata-
logue of Conserved Germplasm which is being developed by
COGENT.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Dwarf type
1. Nias Yellow Dwarf North Sumatra Feb 77 77
2. Bali Yellow Dwarf Bali Island Feb 77 50
3. Nias Green Dwarf North Sumatra Nov 78 65
4. Jombang Green Dwarf East Jawa Nov 78 56
5. Tebing Tinggi Dwarf North Sumatra Dec 79 49
6. Malaysia red Dwarf Malaysia May 80 12
7. Raja Dwarf North Molucas Aug 80 43
8. Sagerat Orange Dwarf North Molucas May 87 18
9. Salak Dwarf South Kalimantan Aug 80 46
10. Waingapu Red Dwarf East Nusa Tenggara May 99 52
11. Malaysia Yellow Dwarf Malaysia 11
12. Shinta red Dwarf North Sulawesi Seedlings
13. Kapal (pink husk) Dwarf North Sulawesi Seedlings
Tall Type
1. Mapanget (Tammes collection) Tall North Sulawesi 1927/ 1928
2. Takome Tall North Molucas May 77 51
3. Bali Tall Bali island Nov 87 60
4. Jepara Tall Central Java Nov 87 58
5. Paslaten Tall North Sulawesi Nov 87 84
6. Solo Tall Central Sulawesi Seedlings
7. Palapi Tall Central Sulawesi Seedlings
8. Melangoane Tall North Sulawesi Seedlings
9. Makariki Tall North Molucas 1999 5
10. Spikata Tall Halmahera 1999 4
11. Ceylon King Tall Sri Lanka 1999 20
12. Tenga Tall North Sulawesi Nov 87 87
13. Banyuwangi Tall East Java Jan 79 39
14. Sawarna Tall North Sulawesi Aug 80 51
15. Mapanget No. 83 Tall North Sulawesi May 81 38
16. Mapanget No. 32 Tall North Sulawesi July 81 39
17. Lubuk Pakam Tall North Sulawesi May 81 61
18. Aertembaga Tall North Sulawesi Nov 81 37
19. Ilo-Ilo Tall North Sulawesi Nov 81 47
20. Pungkol Tall North Sulawesi Nov 81 53
21. Tontalete Tall North Sulawesi Nov 81 42
22. Kinabutuhan Tall North Sulawesi Nov 81 55
23. Talise Tall North Sulawesi Nov 81 21
24. Marinsow Tall North Sulawesi Nov 81 35
25. Sea Tall North Sulawesi Jan 82 46
26. Kalasey Tall North Sulawesi Jan 82 49
27. Wusa Tall North Sulawesi Jan 82 52
28. Palu Tall Central Sulawesi Nov 82 52
29. Pandu Tall North Sulawesi May 83 45
30. Mapanget No. 99 Tall North Sulawesi May 83 50
31. Mapanget No. 55 Tall North Sulawesi May 83 43
32. Mapanget No. 2 Tall North Sulawesi May 83 42
33. Igo Duku Tall North Molucas May 83 36
34. Igo Bulan Tall North Molucas May 83 19
35. Rennel Tall Solomon May 83 94
36. West African Tall Cote d’Ivoire May 83 115
37. Tahiti Tall Polynesia June 83 125
38. Mamuaya Tall North Sulawesi May 99 66
39. Dobo Tall North Molucas May 98 3
40. Sangtombolang Tall North Sulawesi Oct 2000 110
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COCONUT GENETIC RESOURCES
Date of Surviving
No. Accessions Origin
Planting palms
B. Pakuwon (East Java)
Dwarf Type
1. Nias Yellow Dwarf North Sumatra Feb 77 61
2. Bali Yellow Dwarf Bali Island Feb 77 57
3. Jombang Yellow Dwarf East Java Nov 78 42
4. Jombang Green Dwarf East Java Nov 78 42
5. Nias Green Dwarf North Sumatra Nov 78 58
6. Malaysia Yellow Dwarf Malaysia May 80 67
7. Raja Dwarf North Molucas Aug 80 42
8. Salak Dwarf South Kalimantan Feb 88 250
Tall Type
1. Boyoali Tall Central Java Nov 78 55
2. Banyuwangi Tall East Java Nov 78 58
3. Jepara Tall Central Java Nov 78 50
4. Paslaten Tall North Sulawesi Apr 79 73
5. Bali Tall Bali Island Apr 79 66
6. Tenga Tall North Sulawesi Apr 79 71
7. Palu Tall Central Sulawesi Apr 79 59
8. Lubuk Pakam Tall North Sulawesi Oct 79 59
9. Sawarna Tall West Java Mar 80 100
10. Kar-Kar Tall Papua New Guinea Mar 80 96
11. Markham Valley Tall Papua New Guinea Mar 80 100
12. Pangandaran Tall West Java Aug 86 78
Dwarf Type
1. Nias Yellow Dwarf North Sulawesi Apr 97 84
2. Tebing Tinggi Dwarf North Sulawesi Apr 97 78
3. Salak Dwarf South Kalimantan Apr 97 74
4. Bali Yellow Dwarf Bali island Apr 97 74
5. Raja Dwarf North Molucas Apr 97 50
6. Jombang Green Dwarf East Java Dec 99 21
7. Jombang Yellow Dwarf East Java Dec 99 23
8. Jombang Yellow Dwarf East Java Dec 99 18
9. Jombang Brown Dwarf East Java Dec 99 23
Tall Type
1. Tenga Tall (Self) North Sulawesi Jan 99 30
2. Bali Tall (Self) Bali Island Jan 99 29
3. Palu Tall (Self) Central Sulawesi Jan 99 30
4. Sawarna Tall (Self) West Java Jan 99 57
5. Mapanget Tall (Self) North Sulawesi Jan 99 29
6. Wulurat Tall Southeast Molucas Jan 99 59
7. Ngilngof Tall Southeast Molucas Jan 99 57
8. Pulau Kelapa Tall Southeast Molucas Jan 99 87
9. Togawa Tall North Molucas Jan 99 89
10. Golatamo Tall North Molucas Jan 99 88
11. Kumo-B Tall North Molucas Jan 99 58
12. Babang Tall Bacan Island Apr 99 80
(Molucas)
13. Kupal Tall Bacan Island Apr 99 76
(Molucas)
14. Bibinoi Tall Bacan Island Apr 99 75
(Molucas)
15. Beber Tall West Nusa Tenggara Apr 99 72
16. Ijobalit Tall West Nusa Tenggara Apr 99 80
17. Tanjung Tall West Nusa Tenggara Apr 99 68
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CHAPTER 9: Country reports on status of coconut genetic resources research
Date of Surviving
No. Accessions Origin
Planting palms
18. Rote Tall East Nusa Tenggara Sept 99 90
19. Palakahembing Tall East Nusa Tenggara Sept 99 82
20. Nita Tall East Nusa Tenggara Sept 99 80
21. Bawang Tall Riau Sept 99 11
22. Riau (Tekulai) Tall Riau Sept 99 90
23. Pangandaran Tall West Java Sept 99 90
24. Klambu Buruk Tall Riau Sept 99 80
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COCONUT GENETIC RESOURCES
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sap from the hybrid PB 121 for sugar processing; and (3) evaluation of
coconut germplasm collection in Mapanget. For sap and sugar
production, farmer participatory research (FPR) was conducted in
Lampung, Riau, Central Sulawesi and North Sulawesi. Within the four
provinces surveyed, the local communities recognized 57 coconut
accessions, consisting of 37 Talls, 12 Dwarfs and 8 hybrids. Some
important opportunities identified include:
1. Potential diversified coconut-based high-value products;
2. Intercrops suitable for planting under coconut;
3. Genetic materials for coconut breeding and improvement
programmes; and
4. Local sources for high-quality planting materials.
This was undertaken in three villages, namely Wori and Nonapan villages
in North Sulawesi Province and Huntu in Gorontalo Province, involving
748 farmers. Under the project, training was specifically geared towards
empowering resource-poor farmers and socioecomically disadvantaged
women, transforming them from being mere raw materials suppliers to
village-level entrepreneurs. Under the project, a total of 7504 local and
615
COCONUT GENETIC RESOURCES
Production of hybrids
KHINA hybrids
In order to produce coconut hybrids with high productivity and precocity,
the following crosses were made: Nias Yellow Dwarf (NYD) x Tenga
Tall (TGT), Nias Yellow Dwarf (NYD) x Bali Tall (BAT), Nias Yellow
Dwarf (NYD) x Palu Tall (PUT). These resulted in the KHINA hybrids,
namely: KHINA-1, KHINA-2 and KHINA-3, which were released in 1984
by the Ministry of Agriculture for distribution to farmers.
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Looking ahead
A coconut breeding programme that would produce new varieties is the
priority of ICOPRI. The main objective of the programme is to produce
planting material on a large scale with desirable characteristics such as
early fruiting and high copra yield. The other preferred characters by
coconut farmers that will be incorporated into the genepool include: (1)
tolerance to drought; (2) adapted to tidal swampy area; and (3) resistance
to bud rot and nut fall diseases.
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COCONUT GENETIC RESOURCES
Introduction
In Thailand, coconut plays an important role in the economy of the
country and in the daily life of the Thai people. Farmers use coconut in
various ways and maintain a wide range of varieties suited for different
uses. Its cultivation is a major source of employment, income and food,
especially for poor rural families. Owing to low income from traditional
products such as mature nut, copra and coconut oil, diversification into
alternative, high-value products is the country’s major approach in
helping increase farmers’ incomes.
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The results showed that Nakhon Tall and the hybrid SW.1 were the better
sap yielders of the four varieties studied.
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622
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References
Anonymous. 1987. The establishment of Khog Wuaw Group coconut
shell handcrafts community. Unpublished paper. 53p.
Centre for Agricultural Information. 2000. Cost of producing coconuts.
Office of Agricultural Economies, Bangkok, Thailand.
Chulapan Petchpiroon. 1995. Aromatic Coconut. Paper presented dur-
ing the ‘Young Tender Coconut Training Course’, 21 – 24 March
1995, Bangkok, Thailand.
Chomchalow, N. 1999. Amazing Thai coconut. Horticulture Research
Institute, Chatuchak, Bangkok, Thailand.
Department of Agricultural Extension. 1995. Statistics of fruit trees.
Bangkok. Thailand.
Department of Agricultural Extension. 1999. Statistics of fruit trees.
Bangkok, Thailand.
Department of Business Economics. 2000. Export of Thailand: Palm sugar
statistics. Commerce Centre and the Thai Customs Department,
Bangkok, Thailand.
Department of Business Economics. 2000. List of palm sugar exporters.
Commerce Centre and the Export Promotion Department, Bangkok,
Thailand.
Department of Business Economics. 2000. List of coconut shell handi-
crafts exporters. Commerce Centre and the Export Promotion Cen-
ter, Bangkok, Thailand.
Department of Interior Trade. 2000. Wholesale price of coconut sugar in
Bangkok, Thailand.
Kanchanapak, J. 2000. Feasibility study on marketing of Khog Wuaw
coconut shell handicrafts, Chaiburi, Phattalung. Division of Devel-
oping Community Economics and Environment, Department of De-
veloping Community, Ministry of Interior, Bangkok, Thailand.
Naka, P. 2000. Thailand catalogue of high-value coconut products, sus-
tainable use of coconut genetic resources to enhance incomes and
nutrition of coconut smallholders in the Asia Pacific region. Unpub-
lished technical report. 35p.
Naka, P. 2000. Feasibility studies on coconut palm sugar and coconut
shell handicrafts production and marketing for Thailand coconut-
based processing and livelihood project, sustainable use of coconut
genetic resources to enhance incomes and nutrition of coconut
smallholders in the Asia-Pacific region. 56p.
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624
CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
Coconut (Cocos nucifera L.) is considered the most important perennial
oil crop in Vietnam, with an estimated total cultivated land area of 250
000 ha. In Vietnam, the coconut and its by-products is the main source
of income for thousands of farmers and their families, especially in rural
areas. The crop is pivotal in the government’s national poverty reduction
programme and is considered as a strategic oil crop that has the potential
of earning much needed foreign exchange.
An average coconut holding in Vietnam is relatively small, about 0.2
– 0.3 ha. Coconut yields, as well as nut prices, are also quite low. Most
palms are currently affected by the coconut leaf beetle (Brontispa longissima
Gestro), resulting in low yields. Although a variety of high-value products
are being produced, marketing channels are not well-organized. Most
coconut farmers produce mostly whole nuts and copra and are suffering
due to low price of these traditional coconut products. Recently, the price
of coconut has been better because of the increased local demand (most
of which is then processed and exported) but even this price level is
unstable. High income generating technologies for producing high-value
products from the other parts of the coconut are not readily available for
all coconut growing communities. Another major problem facing coconut
producers and processors is the lack of access to capital for investing in
more modern and efficient coconut cultivation and processing
technologies.
On the other hand, Vietnam has a wide coconut genetic diversity
base with potential varieties for specific uses such as the Ta, Dau and
Bung Talls for oil production and making products by processing husk,
shell and water; and the Xiem and Tam Quan Dwarfs for tendernut
(drinking) production. High-value coconut varieties such as Sap
(Makapuno), Dua (Aromatic) also offer potential high-income
alternatives for coconut farmers.
Vietnamese farmers have extensive knowledge of and experience in
coconut cultivation under different agroecological conditions, especially
in the Mekong Delta. Most of them are organized into community-based
organizations (CBOs), which make the technology transfer of advanced
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626
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Meetings/ workshops
From 1999 to 2004, Vietnam has hosted five important COGENT-
sponsored meetings, including the annual meetings for the ADB and
IFAD-funded projects, the 8th COGENT Steering Committee meeting in
September 1999, the project inception and stakeholders’ meeting of the
ADB-funded ‘Poverty Reduction in Coconut Growing Communities
Project’ in February – March 2002 and the final ADB-funded project
meeting on Poverty Reduction in Coconut Growing Communities
(PRCGC) in September 2004. All these meetings were held in Ho Chi
Minh City and hosted by OPI.
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630
CHAPTER 9: Country reports on status of coconut genetic resources research
factories in Ben Tre Province alone use about 100 million coconuts per
year to sustain production levels! More factories are planned to be
established in other provinces, although the same raw material shortfall
scenario is expected.
631
COCONUT GENETIC RESOURCES
facilities have also been upgraded consistent with the staff capacity level.
These have been decisive factors for the success of projects undertaken
by OPI in collaboration with its partners since 1994 and up to the present.
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Introduction
In Malaysia, coconut ranks the fourth most important crop in terms of
area planted, after oil palm, rubber and rice, respectively. In 1981, the
total area planted to coconut was 409 348 hectares, but in 1995 it
drastically declined to 248 380 hectares, which represent about 5% of
the country’s total agricultural land area. As in the rest of the countries
in the Asia and Pacific region, smallholders, with an average farm size
of 2.8 ha, dominate coconut production in the country, producing about
93% of the total coconuts in the country. It is estimated that a total of 90
000 farm families are involved in coconut production.
The local demand for the crop is mainly in the form of fresh nuts,
coconut oil and processed products such as desiccated coconut and
coconut cream. Despite the shrinkage of the area under coconut, the
country is still a net exporter of coconut products. In 1995, exports were
valued at about RM 165.2 million (US$ 43.5 million), primarily in the
form of coconut oil, desiccated coconut, copra and fresh whole nuts.
Imports of coconut and related products, on the other hand, amounted
to RM 77 million (US$ 20.3 million). However, over the years, the
international prices of copra dropped, which resulted in a corresponding
decrease in coconut cultivation and production. The competition for land
for oil palm planting and infrastructure development also significantly
contributed to the reduction of coconut hectarage in the country. All of
these factors have, therefore, endangered the coconut genetic resources
of the country.
To mitigate this situation, the Malaysian Government, primarily
through the Malaysian Agricultural Research and Development Institute
(MARDI), collaborated with a number of international coconut R&D
organizations, particularly International Plant Genetic Resources
Institute/International Coconut Genetic Resources Network (IPGRI/
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635
COCONUT GENETIC RESOURCES
farmers. It was also found out in the survey that the oil produced from
the green coconut has medicinal properties. The main constraints to
coconut production were senile coconut palms, low prices of coconut
and lack of workers in the farm. To address this, it was recommended
that a comprehensive replanting programme be implemented to replace
the old palms with high-yielding varieties and hybrids, and request the
government to peg the farmgate price for coconut. From the profitability
analysis and market survey, it was determined that banana, lime and
pineapple, in that order, are the best intercrops for coconuts. The
technologies generated from this project have been disseminated to
coconut farmers.
The evaluation was carried out to ensure that the selected coconut-
producing communities were indeed poor but have the potential for
poverty reduction. The identified sites are economically underdeveloped,
isolated and ecologically fragile. The communities have saline and
brackish water, low nitrogen soil, high average temperature and prone
to typhoons. On the other hand, the coconut farmers interviewed in these
sites have shown much interest in the project and the interventions to be
introduced, particularly on the processing of coconuts into high-value
products. Based on the survey, eight communities were selected as pilot
project sites: Hutan Melintang, Telok Baru, Rungkup, and Bagan Datoh
in Perak; Kampung Baru and Kampung Tengah, in Selangor; and Sikuati
and Matunggung in Kudat, Sabah.
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COCONUT GENETIC RESOURCES
Future activities
Maintenance and evaluation of coconut germplasm. The existing
conserved population will be evaluated and propagated as planting
materials. Besides evaluating for their yields, traits or characters for
specific purposes will be assessed.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
The Philippines has a total land area of 300 000 sq km, stretching 1839
kilometres from north to south, and is located off the southeast coast of
Asia. Its 7107 islands make the Philippines one of the largest island groups
in the world.
The Philippine coconut industry for so many years now has been
heavily dependent on the production of traditional products mainly
copra, coconut oil and copra cake. In fact, 90% of the total production
goes to copra and coconut oil, which comes from only 35% of the whole
nut. The other 65% - the husk, water, and shell - are underutilized.
Processing procedures have been stagnant for decades and presently the
Philippine coconut industry is losing market ground to other vegetable
oils. Unless this trend is reversed, the Philippine coconut industry would
certainly be doomed. While major headways have been attained in the
area of agricultural research and development (R&D) especially on
increasing production through varietal improvement, integrated coconut-
based farming systems and integrated pest control, research efforts to
focus on new sources of income from product diversification, improved
product quality and new technologies to enhance the competitiveness of
the industry have been more of an academic exercise. As such, these
achievements in coconut R&D have not contributed meaningfully in
strengthening the market position of the industry, thus seriously putting
the industry’s growth and development in a precarious situation.
The Philippine’s coconut area is estimated at 4.09 million hectares,
with most areas comprised of small landholdings with an average farm
size of 3.6 ha. However, 72% of these landholdings are below 3.0 ha
(Batugal and Oliver 2003).
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COCONUT GENETIC RESOURCES
Table 1. Coconut area, number of bearing trees and total nuts gathered by region,
Philippines (CY 1999 - 2000)
(Source: Batugal and Oliver 2003)
Coconut area No. of bearing palms Total nuts harvested
REGION (in ‘000 ha) (in ‘000) (in ‘000 000)
1999 2000 1999 2000 1999 2000
CAR 0.23 0.23 48.00 48.00 0.73 0.68
Ilocos Region 10.58 10.72 2276.00 2284.00 17.81 19.02
Cagayan Valley 7.72 9.72 1333.00 1343.00 37.69 47.95
Central Luzon 3.13 3.45 177.00 218.00 5.59 5.51
Southern Tagalog 734.13 746.93 59 149.00 59 074.00 1999.25 1955.12
Bicol 667.08 655.49 28 233.00 28 233.00 1124.11 1146.84
Western Visayas 123.80 123.49 10 114.00 9678.00 342.57 400.87
Central Visayas 156.24 156.16 12 638.00 12 565.00 304.25 298.96
Eastern Visayas 618.88 619.02 53 793.00 53 793.00 1551.01 1544.81
Western Mindanao 404.18 402.86 35 024.00 35 267.00 1331.85 1378.14
Northern Mindanao 231.92 231.92 14 820.00 17 677.00 546.77 564.83
Southern Mindanao 491.12 491.11 43 857.00 43 857.00 3338.76 3323.44
Central Mindanao 118.34 118.34 11 416.00 11 416.00 425.03 419.70
CARAGA 265.21 261.88 16 417.00 16 354.00 519.67 491.86
ARMM 258.60 258.80 26 319.00 26 319.00 958.90 901.38
TOTAL 4091.16 4090.12 315 614.00 318 126.00 12 503.99 12 499.11
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CHAPTER 9: Country reports on status of coconut genetic resources research
641
COCONUT GENETIC RESOURCES
seed generation for subsequent planting and this will make the coconut
farmers more self-reliant in the production of their own hybrid seednuts.
Recently, two Philippine Dwarf varieties, Galas Green Dwarf (GALD)
and Tacunan Green Dwarf (TACD) passed the international standards
set by the C&A Products Co., Ltd. of Thailand for young tender coconut.
These were found to be better than the famous Thai aromatic varieties
Nam Hom (HOM) and Nam Wan (WAN). A recent addition to the PCA
genebank is a rare coconut called ‘Tutupaen’ or ‘Tupa’, whose shell is so
thick that it’s almost as thick as its meat. Nuts from the ‘Tutupaen’ are
not consumed due to superstitious belief that once eaten, the shell will
become brittle. Debris from the ‘Tupa’ tree is also buried for the same
reason (Calub 2002). ‘Tutupaen’ nuts are used solely for ‘Tupa’, a local
throw-and-hit game wherein the players involved try to hit the opponent’s
nut while it is rolling. The first nut to crack or break is declared the loser
regardless whether it is the roller’s or the hitter’s.
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CHAPTER 9: Country reports on status of coconut genetic resources research
intercropping various food security and cash crops with coconut; and
219 are engaged in processing high-value coconut-based products such
as handicrafts and food products. Some farmers and women are engaged
in two or more income generating activities. Aside from copra, fresh nuts
and toddy, other new high-value coconut products being produced are
virgin coconut oil, shell handicrafts, pyroligneous alcohol, sugar, vinegar
and various food items from kernel like ‘buko-pie’, ‘bukayo’, boat tart
and macaroons. These activities have increased farmers’ incomes by 2-3
times.
More than 200 farmers and women were involved in the operations
of the community-based nurseries. There were seven community-
managed nurseries established during the project, five were solely coconut
nurseries and two were integrated nurseries for coconut, fruit trees and
other crops. These nurseries produced a total of 28 174 seednuts of various
coconut varieties, some were introductions from the government’s
Coconut Research Stations and others were taken from selected high-
value high-yielding coconut palms in the locality. These local varieties
were characterized, identified and paint-marked during the
characterization done with the help of PCA using a participatory farmers’
variety characterization process and COGENT’s standardized coconut
breeding techniques (STANTECH) protocol. About 23 000 seedlings have
been planted by the CBO members in the project sites as part of strategy
to promote on-farm conservation of coconut diversity. The nurseries have
also produced more than 7000 seedlings of mixed species of forest and
fruit trees.
The country project has published and distributed seven technoguides,
four CBO project fact sheets and published one article in a national
monthly magazine. It has made presentations and briefings to seven
meetings, conferences and televised interview. The project has distributed
12 technoguides from the PCA’s recent research outputs. This public
awareness campaign is envisaged to generate interest from the
government, private sector and other development organizations to
provide support, either in expansion of activities within the current project
sites or in replicating similar project in other coconut growing communities
in the country. It was also aimed at promoting viable technologies that
can help other farmers to increase their farm productivity and income.
Encouraged by the initial successes, the project will be replicated in Nabas,
Aklan; Tanjay, Negros Oriental; Sanchez Mira, Cagayan; and Biliran,
Biliran.
643
COCONUT GENETIC RESOURCES
644
CHAPTER 9: Country reports on status of coconut genetic resources research
645
COCONUT GENETIC RESOURCES
The diagnostic techniques for CCCVd have been applied for regular
indexing of palms used in CCCVd transmission, epidemiology, molecular
variation, resistance screening and host range studies. Intensive
monitoring of CCCVd spread and distribution is now made easy even in
remote survey sites. The availability of simple, reliable and cost efficient
disease diagnosis techniques has facilitated the development of various
avenues for disease control. Early detection on symptom-less palms and
those at the very early stage of the disease have provided more accurate
epidemiological data. In the absence of specific control measures for
Cadang-cadang, early detection followed by eradication (cutting and
burning) of disease palms will help minimize the spread of infection.
CCCVd mutation in the field can be recognized and monitored effectively.
Exploration into disease resistance and tolerance, vector control and mild
strain protection can now be pursued.
The developed molecular techniques have also been used to satisfy
quarantine requirements related to Cadang-cadang (i.e. verification of
possible CCCVd contamination in coconut-based food and non-food
coconut products for export). Molecular hybridization assay confirmed
the absence in CCCVd in the solid and liquid endosperm as well as in
food products obtained from the coconut meat and water. Products and
by-products from the coconut meat and water, therefore, do not provide
any risk of disease transmission. Although CCCVd has been detected in
coconut husk, by-products from mature husk (coir and fiber) are also
risk-free as the husk is composed of practically dead tissues and the viroid
cannot survive the additional exposure to processing conditions.
References
Batugal, P and J Oliver (eds). 2005. Poverty reduction in coconut grow-
ing communities, Volume III: Project achievements and impact. IPGRI-
APO, Serdang, Selangor, Malaysia. Pp. 40-43.
COGENT. 2004. COGENT Newsletter Special PRCGC Edition, Septem-
ber 2004. IPGRI-APO, Serdang, Selangor, Malaysia.
Hanold, D. 1998. Diagnostic methods applicable to viroids. Pp. 27-39.
In: D Hanold and J Randles (eds). Report on ACIAR-Funded Research
on Viroids and Viruses of Coconut Palm and Other Tropical Mono-
cotyledons, 1985-1993. ACIAR Working Paper No. 51, August 1998.
Canberra, Australia.
Namia, MTI, MJB Rodriguez and LP Estioko. 1998. Diagnosis of cadang-
cadang by rapid polyacrylamide gel electrophoresis. Pp. 40-43. In: D
Hanold and J Randles (eds). Report on ACIAR-Funded Research on
Viroids and Viruses of Coconut Palm and Other Tropical Monocoty-
646
CHAPTER 9: Country reports on status of coconut genetic resources research
647
COCONUT GENETIC RESOURCES
Introduction
In China, because of the cold weather, coconut palms can only grow in
the country’s southern parts, mainly in Hainan Province, parts of Yunnan
Province and in Guangdong Province. A few coconut palms are
sporadically distributed in Guangxi Province in the southwest and Fujian
Province in the southeast (Li Yuandao 1988). The total area under coconut
in the country is about 70 000 hectares.
Two main factors hinder the development of the coconut industry in
China: (1) the long and economically unproductive growing period; and
(2) the low economic return on a per unit area basis (Mao Zushun 1998).
Therefore, it is essential to breed improved varieties and to adopt a
sustainable farming system to strengthen the development of coconut.
Since 1994, some international collaborative projects spearheaded by
the Coconut Research Institute of Chinese Academy of Tropical
Agricultural Science (CRICATAS) had been implemented in China, with
the support of the International Plant Genetic Resources Institute’s
International Coconut Genetic Resources Network (IPGRI-COGENT),
with funding from the Asian Development Bank (ADB). These projects
include technical missions, training courses, meetings, workshops and
coconut-related research activities.
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649
COCONUT GENETIC RESOURCES
Project results/outputs
The results of ADB-funded COGENT projects show that the predominant
coconut varieties grown in China are the local Talls, which are
morphologically diverse. Further studies revealed that China did not have
local Dwarf types. Therefore, for purposes of hybrid production, some
high-yielding Dwarf varieties from other countries have been introduced
to be used as female parents.
Among the local Talls, green-brown is the common colour of the
seedling sprouts, leaf stalks, inflorescence and the immature fruits. When
the fruits are young (six to nine months), their colour is often pale green
or brown. These local Talls usually have the biggest nuts, thickest and
tallest stems, widest canopies and longest leaves among all the coconut
varieties found in the country. They are also very tolerant to diseases,
hurricanes and cold. The weight of fresh fruit ranges from 1.5 to 4 kg;
whereas the dried fruit is about 1 to 2.5 kg. The nut shape is round, with
most palms producing green-coloured fruits except a few that yield
reddish or brownish nuts (Mao Zushun 1986; Tang Longxiang 1999).
Luc Baudouin of the Centre Institut de Recherche Agronomique pour
le Developpement (CIRAD) analysed HNT as well as other Talls from
Southeast Asia, specially those from Vietnam, Thailand, Kampuchea and
Malaysia, using microsatellites (Baudouin 2002) .
650
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651
COCONUT GENETIC RESOURCES
652
CHAPTER 9: Country reports on status of coconut genetic resources research
References
Li Yuandao. 1988. Cultivation of coconut. Guangdong Science and Tech-
nology Press. Guangzhou, China.
Mao Zushun. 1986. Brief introduction of coconut varieties in Hainan
Island. Forum proceedings of Chinese tropical crops, Danzhou, China.
Mao Zushun. 1998. Coconut. Pp. 323-397. In: Cultivation of Chinese
tropical crops. Chinese Agriculture Press, Beijing, China.
Tang Longxiang. 1999. Development of coconut varieties in China. Sci-
ence and Technology of Tropical Crops 4:56-58.
Baudouin, L. 2002. Study on genetic resources status in Hainan-China,
Report of a visit, 12-18 December 2000. CP SIC No.1505. CIRAD-
CP, Montpellier, France.
653
COCONUT GENETIC RESOURCES
Introduction
After the Second World War (1939-1945), there was an increased global
demand for oil. To meet this demand, many research institutes dealing
with oil crops were formed all over the world, particularly in Africa
(Benin, Ghana, Côte d’Ivoire and Tanzania). In Côte d’Ivoire, the Centre
National de Recherche Agronomique (CNRA) is in charge of agronomic
research nationwide. Work conducted by CNRA concerns several crops
including coconut.
The Coconut Programme of CNRA is based at its Marc Delorme
Research Station in Abidjan in the southern part of the country. About
1000 ha are available for implementing research activities on coconut,
which include germplasm, breeding, agronomy and physiology, crop
protection, technology and biotechnology.
Much work was carried out in developing the coconut genetic
resources of the country, thereby making coconut one of the top perennial
crops in Côte d’Ivoire.
To achieve the objectives of the CNRA’s Coconut Programme, 53
coconut varieties were introduced from 1967 to 1986. Research activities
were implemented mainly in collaboration with the French Government.
The success of the projects carried out on coconut is attributed to factors
such as social and political stability as well as the absence of serious disease
infestations.
Since 1996, the germplasm collection in Côte d’Ivoire became the
centrepiece of the International Coconut Genebank for Africa and the
Indian Ocean (ICG-AIO). The memorandum of agreement formalizing
the establishment of this ICG was signed in 1999 between the International
Coconut Genetic Resources Network (COGENT) of the International Plant
Genetic Resources Institute (IPGRI) and the Government of Côte d’Ivoire
through CNRA, with the Food and Agriculture organization of the United
Nations signing as trustee..
In 1970, the Côte d’Ivoire government initiated a nationwide
campaign to encourage farmers to plant more coconuts and maximize
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CHAPTER 9: Country reports on status of coconut genetic resources research
the use of the crop. To date, the total area planted is estimated to be 50
000 ha. However, the development of the coconut sector has been
generally limited due to many constraints, such as:
• Resistance of farmers to adopt and utilize high-yielding coconut
hybrids;
• Non implementation of agronomic techniques developed by sci-
entists;
• Occurrence of drought in the eastern and the central parts of the
country where most coconuts are planted; and
• Lack of product diversification, especially for high-value prod-
ucts.
Based on these factors, CNRA set the objectives of its Coconut Programme
as follows:
• Select and promote adapted and high-yielding varieties, especially
those tolerant to biotic and abiotic stresses;
• Initiate appropriate agronomic and crop protection methods to
develop the potential of the coconut as a commodity crop;
• Develop appropriate techniques to promote product diversifica-
tion and processing into high-value products; and
• Provide technical assistance to coconut farmers and training to
students.
Research activities
To effectively implement its activities, the CNRA Coconut Programme
collaborates with many local and international institutes and
organizations such as with IPGRI/COGENT, the Bureau for the
Development of Research on Tropical Perennial Crops (BUROTROP) and
the Centre de coopération internationale en recherche agronomique pour
le développement (CIRAD) being its most strategic partners. Some of the
CNRA’s most significant projects on coconut genetic resources
development in recent years include the following:
• Management of coconut genetic resources. From 1967 to 1986, 53
varieties from the entire inter-tropical zone have been introduced.
The establishment of the ICG-AIO and exchange of genetic materials
proposed by countries like Sri Lanka are envisioned to increase the
number of accessions in the ICG. Presently, 92 accessions are con-
served in the field. Morphometric observations are regularly conducted
according to the guidelines set in the STANTECH (Standardized re-
search techniques in coconut breeding) Manual. A rehabilitation pro-
gramme to replace old and senile stands (20 to 30 years old) initiated
in 1988 is ongoing. Recently IPGRI/COGENT, with funding from
655
COCONUT GENETIC RESOURCES
656
CHAPTER 9: Country reports on status of coconut genetic resources research
tions are registered in obsolete software (i.e., IGK and Predec). This
project aims to transfer these data into new, more efficient databases
(i.e., CGRD, CDM, Geneclass) developed by CIRAD. Current data
are now being entered into these new databases.
657
COCONUT GENETIC RESOURCES
Future plans
To further strengthen research activities to meet the increasing demand
of the coconut sector in the country, CNRA would undertake the
following activities in the next few years:
• Increase its collection by 200 accessions by procuring new mate-
rials from other countries;
• Increase the collection in the ICG-AIO through in vitro conserva-
tion and duplicate the site at Sassandra, located 300 km from the
present site;
• Continue with its multilocation hybrid trial to select high-yield-
ing hybrids adapted to different agro-climatic conditions;
• Continue to improve data collection and information manage-
ment system using CGRD, CDM and Geneclass databases;
• Conduct further studies to improve the tolerance of coconut
against LYD, in collaboration with Latin America and Caribbean
(LAC) countries affected by the disease (i.e., Ghana, Mozambique,
Tanzania, Jamaica and Mexico);
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CHAPTER 9: Country reports on status of coconut genetic resources research
References
Assy Bah, B. 1986. Culture in vitro d’embryons zygotiques de cocotier.
Oléagineux 41(7): 321-328.
Bourdeix, R. 1988. Efficacité de la sélection massale sur les composantes
du rendement chez le cocotier. Oléagineux 43: 283-285.
Bourdeix R., J Meunier and YP N’Cho. 1991. Une stratégie de sélection
du cocotier. II. Amélioration des hybrides Grand x Grand. Oléagi-
neux 46(7): 267-282.
Bourdeix, R, J Meunier and YP N’Cho. 1991. Une stratégie de sélection
du cocotier (Cocos Nucifera L.) III. Amélioration des hybrides Nain x
Grand. Oléagineux 46(10): 361-374.
Bourdeix, R, YP N’cho and A Sangare 1992. Le PB121 amélioré.
PALMECHOS 11p.
Konan, JL. 1997. Contribution à l’amélioration de l’adaptation à la
sécheresse du cocotier (Cocos Nucifera L.) par des études biologiques
et physiologiques ; thèse de doctorat, 94 pages. Université nationale
de Cote d’Ivoire.
Konan, JL. 2002. Multilocation trials to identify suitable hybrids and va-
rieties for Africa, Latin America and the Caribbean. Annual project
report submitted to COGENT. IPGRI-APO, Serdang, Malaysia. 12p.
Konan, JL and A Kouassi. 2002. Jaunissement mortel du cocotier: Rap-
port de mission au Ghana projet FSP/PIC (4-10 Mars 2002). 19p.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
The coconut palm (Cocos nucifera L.) was introduced into Ghana probably
from the Cape Verde Island around the 15th century (Harries 1977). The
cultivation of coconut as an estate crop was initially concentrated around
Keta, in southeast Ghana, from where it spread to the rest of the country
(Wills 1962).
Coconut is considered to be a very important economic crop in the
coastal regions of Ghana, especially in the rural communities, and is fast
gaining popularity in many peri-urban communities where it is grown
mainly for its refreshing water.
The International Coconut Genetic Resources Network (COGENT)
has been a key player in efforts to enhance the conservation and utilization
of Ghana’s coconut genetic resources.
Training
COGENT’s involvement in Ghana’s coconut research and development
started in 1997 with the sponsorship of a coconut breeder (Mr Owusu
Nipah) to participate in the Regional STANTECH (Standardized research
techniques in coconut breeding) Trainer’s course for Africa in Abidjan,
Côte d’Ivoire. The course was very timely and important as the
characterization and even the nomenclature of coconut varieties in Ghana,
to say the least, were chaotic. Different departments were using different
characters to describe the same variety and then proceeded to give
different names. The course gave Ghana the opportunity and the
technical knowledge to harmonize research methodologies in breeding
and agronomy.
On his return, Mr Nipah organized two training courses for coconut
researchers and technical officers in Ghana on the use of the STANTECH
Manual and the International Coconut Genetic Resources Database
(CGRD). These training sessions formalized and unified terminologies
and methodologies in coconut R&D in Ghana. Information provided by
661
COCONUT GENETIC RESOURCES
Technical assistance
In March 1998, COGENT sponsored a trip by a coconut expert, Dr YP
N’Cho, to Ghana to help the country identify its coconut research and
development needs, and to formulate an Africa/Indian Ocean coconut
regional project proposal, which led to the development of a research
proposal on Lethal Yellowing Disease (LYD).
In terms of coconut research, the Ministry of Food and Agriculture
has conducted research on drought resistance and started characterizing
the Sri Lanka Green Dwarf (SGD) x Vanuatu Tall (VTT) hybrid which
Ghana is screening for LYD tolerance.
Although the regional project is yet to be launched, the
characterization of SGD x VTT is progressing steadily and should this
hybrid prove to be tolerant to LYD, its yield performance will be further
evaluated.
Completed/ongoing projects
In May 2001, Ghana, with support from COGENT, undertook a research
entitled ‘Establishing a framework and selecting project sites for the
nationwide deployment of coconut-based poverty reduction interventions
in coconut growing communities’ using COGENT’s 3-pronged strategy
for increasing farmers’ incomes. The project was funded by the
Department for International Development (DFID) and the Government
of Ghana.
This project was strategic as its objectives were to determine the
income levels of coconut farmers, the types of products they produce,
varieties cultivated and the farming systems in place. These were
determined to enable the deployment of appropriate technologies for
poverty alleviation in coconut farming communities.
The study showed that coconut farmers were mainly illiterate and
poor with incomes ranging from US$ 42.83 to US$ 142.32 a year. Reasons
for these low incomes were the low yields in farmers’ fields (in some
cases as low as 1.76 t/ha/yr) and that farmers produced only coconut
oil. Gender bias was also observed, with 84.7% of farm owners being
male. The study also identified high-value coconut products that farmers
were interested to produce to augment their incomes (Dery et al. 2001).
Based on the results of this study, a subsequent project entitled
‘Developing sustainable coconut-based income generating technologies
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CHAPTER 9: Country reports on status of coconut genetic resources research
Future plans
Climatic changes have resulted in hitherto favourable coconut growing
zones becoming drier. Competition with other crops, especially rubber
and oil palm, is also pushing the coconut into marginal zones where
drought conditions prevail. It is therefore planned to acquire more
coconut germplasm to screen for drought tolerant varieties suitable for
these zones.
The conservation of farmers’ varieties is very important if we are to
maintain the genetic diversity of coconut in Ghana. The Coconut
Programme intends to promote the multipurpose use of coconut to ensure
that each type of coconut is economically viable and therefore preserved
by farmers. This will reduce the need to establish expensive field
genebanks.
The purity of our coconut accessions will be investigated using the
microsatellite technique. This will be done in collaboration with CIRAD.
665
COCONUT GENETIC RESOURCES
References
Bourdeix, R. 2000. Coconut sector development project: Report on
seednuts production component to the operator of the project (GREL).
CIRAD – CP, Montpellier, France.
Dery SK, YP N’Cho, A Sangare and ED Arkhurst. 1995. Cape St. Paul
Wilt disease: resistance screening and prospects for rehabilitating the
coconut industry in Ghana. Pp. 197-203. In: SJ Eden-Green and F
Ofori (eds). Proceedings of an international workshop on lethal yel-
lowing-like diseases of coconut, Elmina, Ghana. Natural Resources
Institute, Chatham, UK.
Dery, SK and F Ofori 2000. The coconut industry in Ghana: Constraints,
state of research and opportunities for development. Paper presented
at the Second International Coconut Workshop for Africa jointly or-
ganized by BUROTROP, Coast Development Authority of Kenya and
Kenya Agricultural Research Institute, 8 – 12 May 2000. Mombasa,
Kenya.
Dery, SK, NKT Ghartey, CD Kontoh and F Ofori. 2001. Establishing a
framework and selecting project sites for a nationwide deployment
of coconut–based poverty reduction interventions in coconut grow-
ing communities using COGENT’S 3 – pronged strategy in Ghana.
Survey report submitted to IPGRI/COGENT. IPGRI-APO, Serdang,
Selangor, Malaysia.
Dery, SK and F Ofori 2002. Developing sustainable coconut-based in-
come generating technologies in poor rural communities in Ghana.
Ministry of Food and Agriculture, Directorate of Crop Services, Accra,
Ghana.
Harries, HC. 1977. The Cape Verde region (1499 to 1549): The key to
coconut culture in the Western Hemisphere. Turrialba 27:227 – 231.
Wills, JB. 1962. Land use and agriculture in Ghana. Oxford University
Press, London. Pp 353-357.
666
CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
Although the coconut palm (Cocos nucifera L.) is not indigenous to Nigeria,
an estimated 15 000 hectares of land are under coconut cultivation in
the country, mostly in the coastal areas of Lagos State and the delta areas
of Rivers State. Another estimated 1.2 million hectares have been
identified as suitable for coconut cultivation. The crop is found mostly
along the sandy shores of the Atlantic coastlines where it occurs as dense
groves, as well as in the riverine areas of the delta regions and to a lesser
extent in the inland forest zone. More than 90% of the nation’s coconut
belt is a continuation of the plantations or groves along the West African
Coast, running from Cote d’Ivoire and southwards through Ghana, Togo
and Benin to Lagos State in Nigeria where it continues in a one-kilometer
wide strip of groves inland along some 200 kilometres of coastline.
Coconut cultivated outside these coastal groves is predominantly grown
as a compound or homestead crop, with a variety of crops interplanted
between the coconut stands to maximize land use. More than 50% of
the coconut area is planted to the Tall variety which can best be described
as adapted West African Tall (WAT) land races. Dwarf cultivars, on the
other hand, are planted mostly as ornamental compound trees.
Coconut holdings in Nigeria are characteristically low in productivity.
Virtually all plantings of the WAT varieties are low-yielding with annual
production of 3 – 4 metric tonnes (6000 – 8000 nuts) in contrast to the
improved hybrid (Dwarf x Tall) which yields 8 – 10 metric tonnes (16
000 – 20 000 nuts) per hectare per year. The low productivity of these
holdings are also the result of poor management practices, high density
plantings in the groves, poor soil fertility, lack of fertilizer use, prevalence
of diseases and high level of mismatched intercrops. Very limited area is
planted with improved coconut varieties. They are mostly grown on
traditional and family smallholdings, ranging from 0.5 to 1 ha. Recently,
however, there has been an increased awareness of the higher productivity
of the hybrid coconut varieties resulting in increased demand. Plantations
of up to 10 ha on individual or cooperatively-owned farms have been
established, mostly in Lagos State.
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COCONUT GENETIC RESOURCES
Introduction
The coconut palm (Cocos nucifera L.) is an important perennial cash and
subsistence oil crop along the coastal belt of Tanzania, where about 25
million palms are cultivated on approximately 252 000 ha. The crop
supports the livelihood of more than 300 000 rural households, with an
average farm size of 0.5 to1 ha. The coconut is an agroforestry crop that
provides food, cash, shelter, job opportunities and conserves the fragile
coastal belt ecosystem. The crop is also cultivated inland especially in the
Morogoro region and along the shores of Lakes Nyasa, Tanganyika and
Victoria.
It is estimated that each household in traditional coconut growing
areas consume about three to four nuts per day. This high demand cannot
be met due to low and declining production that became more apparent
during the late 1960s and early 1970s. Some of the major constraints
that contributed to this decline include the presence of serious pests and
diseases, poor crop husbandry practices as a result of inadequate
extension services to growers, lack of improved planting materials, ageing
coconut palms, sub-optimal climatic conditions as well as lack of
institutional set-up to promote/support coconut research and
development activities.
It is against this background that the Government of Tanzania decided
to initiate the National Coconut Development Programme (NCDP) in
1979/80 with the mandate to promote coconut production and
utilization, and to improve the productivity of the coconut sector in the
country. The inception of the NCDP marked the beginning of the process
of institutionalizing coconut R&D in the country, which led to the
establishment of the Mikocheni Agricultural Research Institute (MARI)
in 1996. Apart from implementing the NCDP, Tanzania has been
collaborating with regional and international organizations such as the
International Coconut Genetic Resources Network (COGENT) of the
International Plant Genetic Resources Institute (IPGRI), the Bureau for
the Development of Research in Tropical Perennial Oil Crops
(BUROTROP) and other donor agencies in the implementation of a
number of R&D projects on coconuts. This country report covers the
coconut projects that have been implemented or initiated since 1990.
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COCONUT GENETIC RESOURCES
Each country compared four of its best local hybrids/varieties with six
common multi-site control hybrids produced in Côte d’Ivoire, and proven
to have good yield potential. The six multi-site imported hybrids (four
Dwarf x Tall and two Tall x Tall) and the four local hybrids planted in
Tanzania are listed in Table 1.
Table 1. List of multi-site imported hybrids and local genetic materials being evalu-
ated under the multilocation trials in Tanzania
Muti-site (imported) hybrids Local genetic materials
1
Malayan Yellow Dwarf x West African Tall East African Tall x Pemba Red Dwarf
Cameroon Red Dwarf x Rennell Island Tall East African Tall x Rennell Island Tall
Malayan Red Dwarf x Vanuatu Tall East African Tall x Vanuatu Tall
Malayan Red Dwarf x Tagnanan Tall East African Tall
Vanuatu Tall x Tagnanan Tall
Sri Lanka Tall x Tagnanan Tall
The cross PRD x EAT could not be produced due to lack of sufficient PRD palms as seed parent, so a decision
1
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COCONUT GENETIC RESOURCES
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CHAPTER 9: Country reports on status of coconut genetic resources research
the Asian and Pacific Coconut Community (APCC) and the BUROTROP.
The survey confirmed that the local East African Tall is the predominant
and most preferred coconut population in Tanzania. However, improved
hybrids with high yield potential proved to be more susceptible to drought
conditions caused by insufficient and unfavourable rainfall distribution.
This has discouraged framers from planting hybrids. The findings of the
survey have been published by APCC.
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COCONUT GENETIC RESOURCES
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CHAPTER 9: Country reports on status of coconut genetic resources research
nuts because of its relatively stable yields and its growing demand
in urban markets. However, the areas cultivated for these inter
crops are normally small because both are labour demanding;
while the potential labour supply per household is limited to 2 - 3
people.
• Simple but more efficient small-scale processing technologies (e.g.
manually operated rotary graters and ram press) have been de-
veloped and disseminated to coconut farmers.
• Impact studies conducted over the years have revealed that the
project has been able to reverse the declining production and
improve farm productivity. The area under coconuts has been
increasing at an annual rate of 2%, yields have increased from
23-25 nuts/palm/year in 1980s to 30-40 to 2004 due to the fact
that more farmers are applying improved crop management
practices.
677
COCONUT GENETIC RESOURCES
Capacity building
COGENT meetings/workshops
In 2001, Tanzania hosted the 2 nd CFC-funded Project Workshop/
Consultations on 11 to 12 June 2001, followed by the 10th COGENT
Steering Committee Meeting from 12 to 15 June. A participant from MARI
also attended the following:
• Project Inception and Stakeholders’ Meeting on ‘Poverty Reduc-
tion in Coconut growing communities’, 25 February – 1 March 2002,
Ho Chi Minh City, Vietnam;
• Midterm evaluation meeting for the ‘International multi-location
coconut hybrid trials’, 25 – 27 July 2002 in Kingston, Jamaica; and
• Project meeting on ‘Overcoming poverty in coconut growing com-
munities’ in Hat Yai, Thailand on 9 – 13 May 2005.
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COCONUT GENETIC RESOURCES
References
Harrison, N, PA Richardson, P Jones, AM Tymon, SJ Eden-Green and
AA Mpunami. 1994. Comparative investigation of MLOs associated
with Caribbean and African coconut lethal decline diseases by DNA
hybridization and PCR assays. Plant Disease 78: 507-511.
Mpagalile, JJ, B Mjawa and N Temu. 1998. Coconut oil processing using
simplified techniques: A Tanzanian experience. Pp 489-497 In: CP
Topper, PDS Caligari, AK Kullaya, SH Shomari, LJ Kasuga, PAL
Masawe and AA Mpunami (eds). Proceedings of the Cashew and
Coconut Conference: ‘Trees for Life: The Key to Development’.
BioHybrids International Ltd, Reading, UK.
Mpunami, AA. 1997. Molecular methods for detecting the coconut le-
thal disease (LD) phytoplasma in Tanzania. University of
Nottingham, UK. 222p. (Unpublished PhD thesis).
Mpunami, AA, AM Tymon, P Jones and MJ Dickinson. 1999. Genetic
diversity in the coconut lethal yellowing disease phytoplasmas of East
Africa. Plant Pathology 48: 109-114.
Mwinjaka, SR. 2000. Optimal spacing and stand replacement models
for smallholder farmers in Tanzanian coconut-based farming systems
and their socioeconomic assessment. Unpublished PhD dissertation,
University of Zimbabwe.
Rohde, W, A Kullaya, A Mpunami and D Becker. 1993. Rapid and sen-
sitive diagnosis of mycoplasma-like organisms associated with lethal
disease of coconut palm by a specially primed polymerase chain re-
action for the amplification of 16S rDNA. Oleagineux 47: 511-515.
Rohde, W, A Kullaya, J Rodriguez and E Ritter. 1995. Genome analysis
of Cocos nucifera L. by PCR amplification of spacer sequences sepa-
rating a subset of copia-like EcoRI repetitive elements. Journal of Ge-
netics and Breeding 49:179-186.
Rohde, W, J Dowe, A Kullaya, A Santos, J Rodriguez and E Ritter. 1999.
Analysis of genetic biodiversity in Palmae by DNA marker technol-
ogy. Pp. 65-72. In: M Caballero Ruano (ed). Proceedings of the 2nd
International Symposium on Ornamental Palms and Other Mono-
cots from the Tropics. Acta Hort. 486, ISHS.
Schuiling, M and A Mpunami. 1990. Lethal disease of coconut palm in
Tanzania: A review of up to date research and preliminary results of
resistance trials. Pp 171-183. In: ML Robert and DV Zizumbo (eds).
La problematica del amarillamiento del cocotero en Mexico. Centro
de Investigation Cientifica de Yucatan (CICY), Merida, Mexico.
Tymon, AM, P Jones and NA Harrison. 1997. Detection and differentia-
tion of African coconut phytoplasmas: RFLP analysis of PCR-ampli-
fied 16S rDNA and DNA hybridization. Annals of Applied Biology
680
CHAPTER 9: Country reports on status of coconut genetic resources research
131: 91-102.
Schuiling, M, DA Kaiza and A Mpunami. 1992. Lethal disease of coco-
nut palm in Tanzania II. History, distribution and epidemiology.
Oleagineux 47: 516-521.
Swetman, T, S Head and G Anstee. 1998. Comparison of small-scale
coconut processing technologies used in Tanzania. Pp 479-488. In:
CP Topper, PDS Caligari, AK Kullaya, SH Shomari, LJ Kasuga, PAL
Masawe and AA Mpunami (eds). Proceedings of the Cashew and
Coconut Conference: ‘Trees for Life – The Key to Development’.
BioHybrids International Ltd, Reading, UK.
681
COCONUT GENETIC RESOURCES
Introduction
Coconut (Cocos nucifera L.) was introduced to Kenya in the 16th century
by the Portuguese. Its cultivation spread rapidly and became a crop of
considerable economic importance. Arab traders and white settlers grew
the crop in large plantations until the end of the 19th century when
production and marketing shifted to small-scale farmers. Today, coconut
is mainly a small-scale farmer’s crop, with over 80% of coastal farm
households deriving their livelihood, either directly or indirectly, from
coconut.
In 1966, there was an estimated two million coconut trees planted in
Kenya as compared to 456 636 trees existing in 1914. Surveys indicated
that this might have risen to as many as 2.5 million trees in 1977 (Eijnatten
1977). Current estimates put the total number of palms at about 4.4
million. Ironically, the increase in the number of trees was not
accompanied by an increase in yield. The average yield of nuts has been
estimated at 1.5 t/ ha, though actual recorded yields of copra are as low
as 0.45 t/ha. Fruit component analysis done for some Mtwapa palms
showed an average fresh copra yield of 233g per nut (104 g of dry copra/
nut assuming 50% moisture content). Most of the coconut palms are
planted in dense clusters of 10-200 palms around homesteads of less than
0.5 ha (Sculling and Mpunami 1991). Except for one large plantation at
Msambweni in Kwale district, there are no large coconut plantations in
Kenya.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Institutions
The government should form a national body mandated to address
research and development issues in coconut. This national body should
prepare action plans and proposals aimed at addressing the identified
constraints and opportunities to improve the country’s coconut industry.
Coconut farmers should also form associations and federate these so
that they can address and air their concerns to relevant stakeholders
and/or policy makers.
685
COCONUT GENETIC RESOURCES
Crop management
Develop coconut-based farming system research projects and collaborate
with other countries where common problems in this area exist.
International collaboration
Kenya should continue to be an active member of COGENT and
endeavour to become a member of other international coconut
development organizations like the Bureau for the Development of
Research of Tropical Perennial Oil Crops (BUROTROP) and the African
Oil Palm Development Association (AFOPDA).
Information
The research body to be established should link with various information
services within and outside the country in order to acquire necessary
information on coconut.
Funding
A mechanism should be established to raise funds for coconut
development. Possible methods include a levy on imported vegetable oils
such as that imposed on sugar as well as a levy on locally-produced
coconut products. International donors should also be tapped to fund
coconut R&D projects.
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CHAPTER 9: Country reports on status of coconut genetic resources research
References
Eijnatten, CLM Van. 1979. Summary of information on coconut in coast
province and proposal for future work. CARS, Mtwapa, Communi-
cation No. 4. 31p.
Eijnatten, CLM. Van. 1980. Time of starting a coconut nursery. CARS
Newsletter 10: 3.
Eijnatten, CLM. Van, A.M. Gurnah and K.H. Niederstucke. 1977. A study
of coconuts in Kenya’s coastal strip. Technical Communication 19.
Department of Crop Science, Faculty of Agriculture, University of
Nairobi, Kenya.
Malinga, WK. 1995. Coconut growing in Kenya: A country report. Pro-
ceedings of the International Workshop on Lethal Yellowing-like Dis-
eases of Coconut, Elmina, Ghana. Natural Resources Institute,
Chatham, UK.
Gethi, JG and WK Malinga. 1997. Kenya coconuts: Past, present and
future. Pp. 155-158. In: CP Topper, PDS Caligari, AK Kullaya, SH
Shomari, PAL Masawe and A Mpunani (eds). Proceedings of the
International Cashew and Coconut Conference: ‘Trees for Life – Key
to Development’. Bio-Hybrids International, Reading, UK.
Muniu, FK, MK Danda and PO Odhiambo. 2002. Diagnostic survey report
on coconut industry in coastal Kenya. Internal Technical Report.
KARI, Mtwapa.
Omondi, OC and CLM Eijnatten. 1980. The coreid bug of coconut: A
review of literature. Communication No. 17. Coast Agricultural Re-
search Station. 13p.
Sculling, M and A Mpunani. 1991. Report on the visit to coastal Kenya
including the islands of Lamu and Pate (August 1991). National Co-
conut Development Programme, Disease control section, Dar es Sa-
laam, Tanzania. 4p.
Waaijenberg, H. 1994. Miji Kenda Agriculture in the coastal provinces
of Kenya: Peasants in between tradition ecology and policy.
Wageningen Agricultural University, Wageningen, Netherlands.
307p. (Unpublished PhD thesis).
687
COCONUT GENETIC RESOURCES
Introduction
Coconut in Mozambique is mostly grown along the coast with an
estimated production area of 16 000 ha. Coconut production is mainly a
family based enterprise with more than 60% of the stands located in
small landholdings. It is estimated that about 14% of the Mozambican
population depends on the crop as their main source of income and
nutrition or food. The country’s total production is about 60 000 tonnes
of copra-equivalent, of which 50% is consumed locally. Revenue from
coconut exports is about US$ 10 million annually.
Coconut production in Mozambique is mainly affected by the
following:
• Lack of improved germplasm;
• High incidence of pests and disease, particularly the Lethal Yel-
lowing Disease (LYD) which is presently devastating the indus-
try; and
• Lack of research capabilities, both human and infrastructure.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Other activities
1. In view of the severity of LYD in the northern and central parts of
the country, a national contingency strategy was developed in 2000.
Among its more significant activities included controlling the move-
ment of coconut plants from the affected zones and raising aware-
ness among coconut growers on LYD;
2. Conduct of workshops on LYD which were held in Zambezia and
Cabo Delgado Provinces;
3. Mapping and monitoring of LYD movement in the country, which
were carried out with support from the Centre Institut de Recherche
Agronomique pour le Développement (CIRAD) of France;
4. Establishment of a French Development Agency-funded project to
increase coconut production in small coconut landholdings in
Zambezia Province. The project components include:
• Implementation of an LYD programme;
• Intensification of production programme in the areas not yet af-
689
COCONUT GENETIC RESOURCES
Projects in progress
1. The National Agronomic Research Institute (NARI) is in the process
of establishing a national coconut research programme and COGENT
has been requested to assist in this process, specifically for training
and capacity-building;
2. With support from COGENT, the project on “Poverty Reduction in
Poor Coconut Growing Communities in Mozambique” has been de-
signed and submitted to relevant donors for funding;
3. Development of a Mozambique coconut genebank to address LYD;
and
4. Procurement and development of LYD-resistant, high-yielding and
high-value coconut varieties with technical support from COGENT.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
Scientific research on coconut had its heyday in Seychelles when the
export of copra was the mainstay of the economy until the tourism boom
in the early 1970s. Thereafter, research focused on the selection of better
performing varieties that are well adapted to the poor granitic soils and
which showed positive response to fertilizers and other inputs.
Most of the coconuts planted in the country are local Talls. These
Talls are made up of a number of different varieties characterized by
different nut sizes, shapes and productivity but with no apparent
differences in tree morphology. Among the common local varieties
planted are Coco Raisin, Coco le Haut, Coco le Rein and Coco Bleu.
In a bid to boost coconut production, Seychelles imported some 10
000 nuts from Ceylon (now Sri Lanka) during 1906 -1911. Studies
conducted in 1935 found that these imported varieties were inferior to
the local Talls as they required far more intensive cultural practices and
were more prone to diseases. In 1931, Dwarf coconuts were introduced
from the Malay States, particularly the Malayan Yellow and Malayan
Red Dwarfs (MYD and MRD). Fruits of these varieties are mostly used
for decorative purposes and consumed locally or sold to tourists as
tendernuts for drinking.
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CHAPTER 9: Country reports on status of coconut genetic resources research
Land. With the rapid rate of social development and competition for
land by other economic sectors such as tourism and manufacturing, there
is less and less land available for agriculture. Thus, future coconut
plantations may have to be of lesser acreage, planted more densely or
managed in complementation with another purpose (e.g. lending
aesthetic value to eco-tourism centres).
Labour. The present cost of labour will greatly affect the price of the
alternative high-value products from coconut. In the short run, such
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CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
Coconut growing is important for the economies of Northeastern and
Northern Brazil, accounting for approximately 82% of the country’s
production (IBGE 2003). Brazil ranks fifth among the coconut producing
countries in the world (FAO 2002). Coconuts are planted from the
Northern State of Roraima to the State of Paraná in the South, with high
concentrations in the coastal line from Pará to Rio de Janeiro. They are
cultivated in the most diverse soil, climate and management conditions.
The most utilized coconut parts are water from the green coconut
(tendernut) and the fresh meat from the mature nut. The use of coconut
by-products in Brazil is still very limited.
Populations of Tall coconut palms introduced by the Portuguese in
the 16th century spread through the northeastern coastal zone, adapting
themselves to different environmental conditions to create different
ecotypes (Ribeiro et al. 1999; 2000). The Brazilian Agricultural Research
Corporation (Embrapa) collected, characterized and conserved the
genetic variability of these populations, and used them for developing
superior hybrids with better production traits and quality, adapted to
different Brazilian agroecological zones. Brazil has established a coconut
genebank in the State of Sergipe to serve Embrapa´s coconut improvement
programme. There is now a commitment to upgrade this genebank to
become an International Coconut Genebank for Latin America and the
Caribbean (ICG-LAC) with the support of the International Plant Genetic
Resources Institute (IPGRI) and the International Coconut Genetic
Resources Network (COGENT).
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COCONUT GENETIC RESOURCES
Germplasm introduction
According to Siqueira et al. (2002), coconut was first introduced by the
Portuguese in 1553, in Bahia, from seeds of Tall coconuts originating
from Cabo Verde Island. A second introduction happened in 1939, in
Rio de Janeiro coastal area. A third was carried out by the Cocoa Authority
(CEPLAC) in 1978, again in Bahia, introducing the West African Tall
(WAT) from Côte d’Ivoire; in partnership with the Centre Institut
Recherche Agronomique pour le Développement (CIRAD). A fourth
introduction occurred in 1981, when Sococo, a coconut processing
company, imported seednuts of West African Tall (WAT), for planting
in a field in the state of Pará. A fifth introduction happened in 1983 by
Embrapa, with ecotypes from Côte d’Ivoire, which initiated the
establishment of the national coconut genebank in Neopolis-SE. The
populations introduced include WAT, Rennell Island Tall (RIT),
Polynesian Tall (PYT), Rotuma Tall (RTT), Tonga Tall (TONT), Vanuatu
(VTT) and Malaysian Tall (MLT) (Siqueira and França-Dantas 1984).
Populations of WAT, RIT, TONT, VTT and MLT were reintroduced in
1984, while those of RIT, PYT and of VTT were reintroduced in 1986
(Ribeiro and Siqueira 1995).
Dwarf types were first introduced in 1925, with seedlings procured
from India and distributed in Bahia, Pernambuco and Rio de Janeiro
(Siqueira et al. 2002). A second introduction of Dwarfs took place, in
1938 to Araruama and Cabo Frio, in the coastal area of Rio de Janeiro,
with seedlings of the Yellow Nyor Gading, originated from Malaysia. In
1939, Rio de Janeiro was the site of the third introduction of varieties of
Red and Green Dwarfs from Malaysia. In 1978, under an agreement
between the Comissão do Plano de Recuperação da Lavoura Cacaueira
(CEPLAC) and ex Institut de Recherche pour les Huiles en Oleagineux
(IRHO), actually CIRAD, seeds of Malayan Yellow Dwarf (MYD) and
Cameroon Red Dwarf (CRD) were imported and planted in Bahia. In
1981, the Sococo Company imported MYD seeds from Côte d’Ivoire and
planted them in Para. A sixth introduction was by Embrapa in 1982,
with varieties of MYD, MRD and CRD from Côte D‘Ivoire, for the
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CHAPTER 9: Country reports on status of coconut genetic resources research
The ICG-LAC will have an area of 150 ha and will host some 200 coconut
accessions. The Brazilian Government, through Embrapa, has committed
to establish the ICG-LAC provided that stakeholders, particularly IPGRI-
COGENT, would share the cost of its establishment and maintenance.
Projects
1. Coconut Active Genebank (Embrapa)
2. Development of coconut palm suitable to different ecosystems of
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COCONUT GENETIC RESOURCES
Brazil (Embrapa)
3. Improvement of the scientific knowledge and development of tech-
nologies for the control of the predominant diseases of the coco-
nut palm (Embrapa)
4. Production of hybrid seeds of coconut palm (National for Coun-
cil Scientific and Technological Development or CNPq)
5. Morphologic, chemical and sensorial characterization of water
and fresh meat of fruits of cultivated coconut palms (Bank of
Northeastern Brazil)
6. Fast production of seedlings of Talls and hybrid through tissue
culture (Bank of Northeastern Brazil)
7. Advances in technical-scientific knowledge for the production of
seedlings of Dwarf coconut palms (State of Sergipe Research Foun-
dation or FAP-SE)
8. Development and selection of suitable hybrids of coconut palm
under the different ecosystems of Sergipe (FAP-SE)
Results/ outputs
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CHAPTER 9: Country reports on status of coconut genetic resources research
WAT and BRT were closer to each other than with RLT, and yet each of
these populations was still distinct (Wadt et al. 1999).
701
COCONUT GENETIC RESOURCES
(26.5%) and MRD (32.1%). These results indicate that the fresh meat of
Dwarf coconuts is suitable for use and processing by light-food industries.
With regards to coconut water, the hybrids BGD x BRT (468.2 ml/
fruit), BYD x BRT (471.0 ml/fruit) and BRD x BRT (392.3 ml/fruit) were
higher in water content than their respective female parent, BGD (385.9
ml/fruit), BYD (348.5 ml/fruit) and BRD (382.0 ml/fruit).
All Dwarfs and hybrids are susceptible to mite infestation (Aceria
guerreronis) and to leaf diseases caused by Botryodiplodia theobromae,
Sphaerodothis acrocomiae and Phyllachora torrendiella.
In the State of Amapá, a region with high but well-distributed annual
rainfall (>2000 mm), the BYD, BGD and CRD flower well at 1.7, 1.8 and
2.0 years, respectively. Hybrids BYD x BRT and BRD x BRT, on the other
hand, flowered at 2.5 years; BGD x BRT at 2.6 years; and the giant BRT
at 3.4 years.
In the regions with annual rainfall of only about 1200 mm and
unevenly distributed as in the coastal state of Piauí, BRT, BGD, BGD x
BRT, BYD x BRT and BRD x BRT started to produce in the second and
third year after blooming, registering 17.2 and 44.8; 109.1 and 91.9; 68.5
and 76.0; 64.2 and 98.1; 92.7 and 75.8 fruits/plant/year, respectively.
The research activities described above are also being carried out under
different agroecosystems in the states of Alagoas, Pernambuco, Rio
Grande do Norte, Pará, Goiás, Mato Grosso, São Paulo, Minas Gerais,
Espirito Santo, Paraná and Distrito Federal, being part of the National
Net of Evaluation of Cultivars of Coconut Palm (RENAC). A second
RENAC is being implemented with other cultivars in the states of Sergipe,
Bahia, São Paulo, Paraná, Brasilia and, possibly Alagoas and Mato Grosso.
Future plans
The following would be undertaken by Embrapa in the near future to
further develop the coconut genetic resources in Brazil:
1. Establish the International Coconut Genebank for Latin America
and the Caribbean in Itaporanga-SE; and
2. Maintain the experiments of the international multilocation hy-
brids trial and disseminate their results.
References
FAO. 2002. Statistical databases: Agriculture 2002. Rome, Italy.
IBGE. 2001. Produção Agrícola Municipal. Rio de Janeiro. http://
www.sidra.ibge.gov.br
Moretzsohn, M de C, PJA. Coelho, ZP de S Amaral, A Hercos and EA
Tupinambá. 2001. Desenvolvimento e uso de marcadores
microssatélites na análise da variabilidade genética de ecótipos de
702
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COCONUT GENETIC RESOURCES
Introduction
Mexico is the major coconut producing country in Latin America after
Brazil with 168 000 ha planted to coconut.
Since 1998, coconut farmers in the Latin America and Caribbean
(LAC) region have been facing serious problems that have diminished
their incomes due to the low prices of copra and the decrease in the yield
of old coconut palms. In Mexico, in the Gulf–Caribbean region, there are
about 30 000 ha of the Atlantic Tall coconut whose average yields have
fallen to 550 kg/ha due to the prevalence of Lethal Yellowing Disease
(LYD). In the last 16 years, LYD has devastated around 17 000 ha of
coconut stands in the country.
Coconut palms affected by LYD die within a couple of months after
infection. The common symptoms showed by an LYD-infected palm are
as follows:
1. Fruits fall prematurely, the ovaries miscarry and also fall;
2. Open inflorescences exhibit partial necrosis while developing ones
(after nutfall) exhibit total necrosis;
3. Mature leaves yellow and then turn brown. They later dry com-
pletely and hang limp from the shaft of the palm; and
4. The youngest leaves in the middle of the crown also die and fall
usually after the mature leaves fall off, leaving the tree bald and
with a telephone pole appearance.
Generally, it takes only about six months from the onset of the disease
until the tree dies and assumes the characteristic telephone pole
appearance (Figure 1). Mortality rate is 100% for palms infected by the
disease. At the moment, LYD is the most serious problem affecting not
only Mexico but also Honduras, Guatemala, El Salvador and Belize in
Latin America; Jamaica, Haiti, Dominican Republic and Trinidad-Tobago
in the Caribbean, as well as Tanzania, Ghana and Mozambique in Africa.
In some of these countries, it is suspected that the causal agent of the
disease could be a different strain of the Mycoplasm-Type Organism
(MTO), although this is yet to be proven. Due to its extensive and rapid
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705
COCONUT GENETIC RESOURCES
706
CHAPTER 9: Country reports on status of coconut genetic resources research
707
COCONUT GENETIC RESOURCES
References
Carrillo, RH. 1998. Lethal yellowing coconut in Mexico. Pp. 49-80. In
Memoirs of Masterful Conferences. First National Meeting of Coco-
nut Palm. Acapulco, Mexico. (In Spanish).
Castillo, GR, CE Dominguez and BP Ruiz. 2003. Evaluation of
biofertilizers and fertilizers of slow liberation in Atlantic Tall Coco-
nut. Final report. FOSIGOLFO, INIFAP. (In Spanish)
Been, BO. 1981. Observation on field resistance to lethal yellowing in
coconut varieties and hybrids in Jamaica. Oleagineux 36: 9-12.
Domínguez, CE, AJI Lopez and BP Ruiz. 1994. Preliminary evaluation
of the coconut hybrid Malayan Yellow Dwarf x Lazaro Cardenas
Tall in Tabasco. Pp. 14-16. In: Proceedings of the 7th Scientific Meet-
ing. SAGAR-INIFAP. Villahermosa, Tabasco. (In Spanish).
Domínguez, CE, GR Castillo and BP Ruiz. 2003. Mixed seed garden
production of coconut hybrids. Final report. FOSIGOLFO. INIFAP.
(In Spanish).
Harries, HC. 1973. Selection and breeding of coconuts for resistance to
diseases such as lethal yellowing. Oleagineux 28 8-9: 395-398.
Zizumbo, VD, BM Fernandez and LR Cardeña. 1998. Evaluation of the
resistance to lethal yellowing of the coconut germplasm in Mexico.
Pp. 87-98. In: Memoirs of Masterful conferences. First National
Meeting of Coconut Palm, Acapulco, Mexico. (In Spanish).
708
CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
In Guyana, coconut (Cocos nucifera L.) ranks third, next to rice and sugar,
among the most economically important crops. In spite of this, the
potential of the crop has been largely underexploited and poorly
developed. Coconuts contribute only approximately 1% to the total gross
domestic product (GDP) of the country, an under achievement,
considering its priority ranking in the agricultural sector.
It is estimated that there are 24 000 ha under coconut production,
with an average annual production of 92 million nuts. In order to increase
and sustain the current levels of production to meet market demand for
greater economic efficiency, it is imperative that the issue of increasing
coconut productivity be urgently addressed. According to Paul (1999),
varietal improvement is the most expedient approach to resolving low
productivity and consequent economic inefficiency. He further stated
that varietal enhancement necessitates an analysis of the genetic structure
(population level) and production potential of the diverse types, forms,
strains and varieties grown in Guyana.
This article describes the coconut varieties and forms, and pests and
diseases of economic importance in Guyana. A summary of the proposed
coconut R&D development project for Guyana is also discussed.
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COCONUT GENETIC RESOURCES
Tall types
The most common Tall types existing in the country are the Jamaica Tall
and the Panama Tall, each consisting of two basic colour forms: green
and bronze. The Jamaica Tall bears long, angular nuts with distinct ridges
and a thick mesocarp. Dehusked, its nuts are also angular and pointed
at the end. On the other hand, the Panama Tall fruits are much more
spherical with thinner mesocarp. These two types may be considered
the ‘original’ Tall types in Guyana. Another variant of the Tall type found
on the Coastal Corentyne (No. 60 Village), as reported by Manthriratoa
(1980), is a type with spherical, medium-sized nuts but with a
pronounced dark pink mesocarp. Several variations in epicarp colour
forms have also been observed. Generally, commercial stands could not
be classified on this criterion alone. Farmers, however, could distinguish
between the two Tall types known as Clara Nut and Cocrit Nut. Clara
Nut is similar in character to the Panama Tall. Cocrit Nut, on the other
hand, seems to combine the nut characteristics of the Jamaican Tall and
the Panama Tall.
The Cocrit Nut is regarded as a ‘nut number’ type rather than a ‘nut
size’ type. Fruits of the Cocrit Nut are more spherical than oblong, with
a thin mesocarp and thick kernel. Nut size ranges from small to large,
with trees of larger nuts being less prolific. Commercial copra producers
prefer the ‘5-year’ (five years to begin production) nuts with an
intermediate nut size, high yield and precocity.
The Clara Nut is a ‘nut size’ type. Husked nuts are large and spherical,
with a high water capacity but thin kernel. The coconut water of this
type is described as sweet and is favoured over all the other types grown
for their coconut water. The hectarage devoted to Clara Nut, however,
is minuscule compared to those variants preferred for copra.
A preponderance of Tall types can generally be found in all commercial
holdings. However, in the Pomeroon River area, there is a higher
frequency of Dwarf types in commercial holdings. In all commercial
plantings, demand for new planting materials is generally for the Cocrit
Nut type.
Dwarf types
Commercial Dwarf types are mainly of the green and yellow ‘3-year’
(three years to begin production) variants. Manthriratoa (1980) described
the Green Dwarf as being similar to the Brazilian Green Dwarf in growth
habit, number of nut per bunch and size of nuts. The Yellow Dwarf,
however, is different from the Malaysian Yellow Dwarf, in having a larger
nut size and a less intense yellow colour in petioles and epicarps of the
nuts. A third Dwarf type variant is the Red Dwarf (Orange Dwarf),
restricted mainly to the Pomeroon River area. The Red Dwarf is similar
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CHAPTER 9: Country reports on status of coconut genetic resources research
to the Red Dwarf of India and Sri Lanka and the Malaysian Dwarf.
Manthriratoa (1980) suggested that this variant may be a recent
introduction from a Caribbean Country. Another variant, the Bronze
Dwarf (so-called because of its bronze epicarp), is a relatively new find
of about four years ago. The Bronze Dwarf was reportedly introduced
from Surinam. Currently, there are only a few homesteads with this
variety, but the current demand suggests it has the potential to spread
rapidly to commercial holdings.
Bastard nut
Bastard Nut is predominately recognized in the Pomeroon River area.
Manthriratoa (1980) attributed the origin of this variant to natural cross
pollination between Dwarf and Tall types, being an apparent Dwarf x
Tall hybrid. Bastard Nuts show marked hybrid vigour in trunk and leaf
size, number of bunches produced per year and number of nuts per
bunch.
Varietal improvement
Projects on varietal improvement shall address the immediate breeding
objectives of increased yields, early maturity and disease resistance,
especially against LYD. Breeding strategies shall include the following:
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COCONUT GENETIC RESOURCES
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713
COCONUT GENETIC RESOURCES
References
Manthriratoa, MAPP. 1980. Rehabilitation of the coconut industry of
Guyana. Report to the Government of the Cooperative Republic of
Guyana and the FAO.
Paul, CR. 1999. Coconut growing ecologies and the status of coconut
germplasm resources in Guyana. Paper presented at the Laboratory
Course on the Application of Biotechnology to Plant Breeding and
Crop Potection in Coconut. CICY, Merida, Yucatan, Mexico.
714
CHAPTER 9: Country reports on status of coconut genetic resources research
Introduction
The coconut is not indigenous to Jamaica. The prevailing opinion is that
it was first introduced to the Caribbean and Atlantic coasts of South
America about the middle of the 16th century (Purseglove 1968). Initially,
coconuts seemed to have been planted near harbours and coastal
settlements but later, with the expansion of plantation agriculture, the
crop was grown inland and by 1681, when Hans Sloane visited Jamaica,
coconuts were widespread. By the end of the 19th century, the coconut
had become a plantation crop and flourished in many parts of Jamaica
especially on hillsides, which are not suitable for sugarcane, located mostly
in the wetter eastern section of the island.
At the beginning of the 20th century, the majority of the coconuts
grown commercially were of the Atlantic Tall (Jamaica Tall) variety but
old records showed that there were at least four other varieties, including
the King Coconut introduced from Sri Lanka in 1869. In 1973, Captain
Bligh brought coconuts along with breadfruit to Jamaica from Tahiti.
Following periods of severe hurricane activity in 1903, 1904, 1912-
1917, large numbers of nuts of the Panama Tall variety were imported
from the San Blas Islands. Again, in 1922, there was further importation
of nuts from Panama. In 1921, after the Panama Canal had been opened,
a small number of seednuts of the Niu Leka Dwarf variety were brought
to Jamaica from Fiji. The Niu Leka gave rise to two local populations:
Tulloch Dwarf and Fiji Dwarf. These have not been of much commercial
value. In 1933, 12 open-pollinated seednuts from two hybrids of Malayan
Dwarf x Niu Leka were introduced. The third and fourth generation
selections, locally known as Fiji-Malayans, are still being used in the
country’s breeding programme.
From 1938 to 1940, a few selected red-fruited Malayan Dwarf seednuts
were introduced from the Caribbean island of Trinidad and from these a
population of over 10 000 palms was established in the western part of
the island. It was in that plantation that resistance to lethal yellowing
was first documented. In 1939, about 150 seednuts from red- and yellow-
fruited Malayan Dwarfs were introduced from Florida. Large-scale
introductions of Malayan Dwarf seednuts (red, green and yellow colour
715
COCONUT GENETIC RESOURCES
forms) were made from the island of St. Lucia in 1945 and 1951 following
severe hurricanes. A further introduction from the same source was made
in 1968 as a consequence of the lethal yellowing resistance possessed by
the Malayan Dwarf.
During the 1960s, in response to an outbreak of lethal yellowing
disease in the main coconut growing region, germplasm from most of
the countries in the Asia-Pacific region were introduced with international
assistance for screening. These included Bougainville Tall, Chowghat
Green Dwarf, Fijian Tall, Indian West Dwarf, King Coconut, Malayan
Tall, Malayan Red Dwarf, Malayan Yellow Dwarf, Malayan Green
Dwarf, Niu Leka Dwarf, Peru Tall, Rangiroa Red Dwarf, Rangiroa Tall,
Rennell Tall, Rotuma Tall, Samoan Tall, Sarawak Tall, Seychelles Tall,
Solomon Islands Tall, Spicata Tall, Spicata Red Dwarf, Tahitian Tall,
Thailand Tall, Tonga Tall, Vanuatu Tall and Yap Island Tall. In addition,
pollens of Cambodia Tall, Tahiti Tall, Mozambique Tall and Cameroon
Red Dwarf were obtained from Institut de Recherches pour les Huiles et
Oléagineux (IRHO).
As a part of the multilocation trial funded by the Common Fund for
Commodities (CFC), six F1 hybrids were introduced into Jamaica in 2000
and 2002. In 2001, seednuts from selected Panama Talls in Mexico and
of two locally produced F1 hybrids were imported into Jamaica.
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COCONUT GENETIC RESOURCES
Conclusion
The use of introduced germplasm has enabled the local coconut industry
to survive despite hurricanes and lethal yellowing disease, the two main
threats to the industry.
The resurgence of lethal yellowing necessitates a renewed search for
and use of germplasm with good resistance to this disease. The eventual
solution to the problem may lie in the realm of genetic engineering, but
until then, conventional breeding procedures would have to be used.
References
Been, BO. 1981. Observations on field resistance to lethal yellowing in
coconut varieties and hybrids in Jamaica. Oleagineux 36 1:9-12.
Coconut Industry Board. 1962. Second report of the Research Depart-
ment. Jamaica, West Indies.
Coconut Industry Board. 1980. Twentieth report of the Research De-
partment. Jamaica, West Indies.
Gray, CR. 1990. History of topical cyclones in Jamaica 1886-1986. Jamai-
can Journal of Science and Technology 1:29-48.
718
CHAPTER 9: Country reports on status of coconut genetic resources research
719
COCONUT GENETIC RESOURCES
South Pacific
Status of coconut genetic resources research
in the Cook Islands
W Wigmore1 and T Mataora2
Director of Research and 2Senior Research Officer, Ministry of Agriculture, Rarotonga,
1
Cook Islands
Introduction
The Cook Islands consist of a group of 15 small islands scattered between
167o west and 8-23o south of the equator. Its total land area is 237 sq km,
and the country has one of the largest Exclusive Economic Zones in the
Pacific Region covering approximately 1.8 million sq km of ocean. The
islands are geographically divided into two groups: the Northern Islands
and the Southern Islands. The two island groups have marked differences
in their agricultural activities. The Northern Islands group remains
relatively isolated from the Southern Islands, with the latter continuing
to indulge in more diversified agricultural practices. The Southern Islands
group has a cooler climate and more fertile soil enabling a wider variety
of agricultural production as compared with the Northern Islands where
the soil is relatively unfertile and has poor water holding capacity, thereby
limiting agriculture-related activities.
A census of agriculture in 2000 reports a total cultivated area of 1945
ha or 8.2% of the total land area, a drop of 3.3% from data collected in
the previous census in 1988. Coconut occupied 34.5 ha of the cultivated
land, which includes intercrops in a coconut-based farming system. The
proportion of land under coconuts is somewhat higher on the atolls.
Coconut is widely used, especially in the rural communities and the
Northern Islands, for food and other numerous purposes. Copra, in
previous years, constituted a major export commodity. However, as
international demand for the commodity dropped, copra production
became a non-viable venture.
In April 2000, Dr Roland Bourdeix, coconut palm geneticist and
breeder from the Centre de Coopération Internationale en Recherche
Agronomique pour le Développement (CIRAD) visited the Cook Islands,
with the support of COGENT, from 30 March to 13 April 2000 to collect
data on coconut genetic resources in Cook Islands. Tiara Mataora, Senior
Research Officer with the Ministry of Agriculture acted as the local project
leader. The coconut germplasm collecting, characterization and
conservation were conducted on the islands of Rarotonga and Aitutaki.
The project aimed to survey and collect available data on diversity of
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CHAPTER 9: Country reports on status of coconut genetic resources research
local coconut populations which will be used for breeding and to mitigate
genetic erosion due to population pressure, palm ageing and natural
hazards.
721
COCONUT GENETIC RESOURCES
722
CHAPTER 9: Country reports on status of coconut genetic resources research
2 to 13 Cook Islands Tall – Papaaroa Rarotonga One mature fruit and several leaflets
(COKT03) were harvested from each palm for
molecular analysis. Palm No.2 had
big, elongated brown nuts with a
relatively high proportion of husk.
15 to 29 Cook Islands Dwarf – Totokoitu Rarotonga Ten palms were sampled for fruits
(COKD01) and DNA analysis.
30 to 50 Cook Islands Tall – Vivi (COKT04) Aitutaki Seven or eight palms were sampled
for DNA analysis.
51 to 80 Cook Islands Tall – Golf (COKT05) Aitutaki Ten palms were sampled for leaf
analysis.
81 Cook Islands Dwarf – Vaikoa Aitutaki One palm was sampled for DNA
COKD02) analysis.
82 to 88 Cook Islands Tall – Seven-in-One Rarotonga Seven palms were sampled for DNA
(COKT01) analysis.
89 to 91 Cook Islands Tall – Papua River Rarotonga The palms are remnants of an old
(COKT06) inland plantation. Sampling was
done only for molecular analysis.
723
COCONUT GENETIC RESOURCES
References
COGENT. 2003. COGENT Newsletter 7:9-12. IPGRI-APO, Serdang,
Selangor, Malaysia.
Ministry of Agriculture. 2000. Cook Islands Census of agriculture and
fisheries. Cook Islands Government.
Drew, OJ. 1985. Report on copra industry and potential copra crushing
industry in the Cook Islands. Economic and Social Commission for
Asia and the Pacific, United Nations.
Foale, MA. 1987. Coconut germplasm in the South Pacific Islands. ACIAR
Technical Reports Series No. 4. 23p.
Foale, MA. 2003. The coconut odyssey: The bounteous possibilities of the
tree of life. Australian Centre for International Agricultural Research,
Monograph No. 101. 132p.
Labouisse, JP and R Bourdeix. 2003. Coconut germplasm collecting, char-
acterization, and conservation in Cook Islands, Kiribati, Marshall Is-
lands and Tuvalu. Final report. March 2003. Vanuatu Agriculture
Research and Training Centre, Santo, Vanuatu.
Lombard, K. 2001. Reviewing the coconut (Cocos nucifera L.): The tree of
life. A paper presented for PSS 5326 Advanced Seed Science, Texas
Tech University, USA.
Taffin, G de. 1993. Report of a fact-finding visit on the coconut industry
of the Cook Islands. CIRAD, Montpellier, France.
724
CHAPTER 9: Country reports on status of coconut genetic resources research
South Pacific
Status of coconut genetic resources research
in Fiji
V Kumar1 and T Kete2
1
Director of Research and 2Senior Research Officer, Ministry of Agriculture, Sugar and
Land Resettlement (MASLR), Fiji
Introduction
Coconut germplasm collecting, conservation and varietal description has
been an ongoing collaboration between the Ministry of Agriculture, Sugar
and Land Resettlement (MASLR) and the International Plant Genetic
Resources Network (COGENT) since1994. Fiji has an established
germplasm collection consisting of initial eight accessions at the Taveuni
Coconut Center. These accessions have not been fully characterized. To
better utilize germplasm held in such collection characterization is vital.
Characterization carried out in this activity is limited to morphological
description using COGENT’s standardized techniques in coconut
breeding (STANTECH) manual. The data collected from the evaluation
were sent to the Centre de Coopération Internationale en Recherche
Agronomique pour le Développement (CIRAD) for inclusion in the
International Coconut Genetic Resources (CGRD) database.
COGENT consultants assisted our national projects by assessing our
R&D capacity and also in helping MASLR to identify projects and training
necessary and adapted to our situation.
COGENT initially provided training for developing the National
Coconut Research staff on using STANTECH. The knowledge and skills
acquired through this training was useful and complementary to their
existing skills. Also COGENT’s support in the evaluation of Fiji
germplasm collection enabled us to know better the performance of the
different accessions, which would assist us in recommending to farmers
and policy makers the best varieties to be used for planting.
725
COCONUT GENETIC RESOURCES
726
CHAPTER 9: Country reports on status of coconut genetic resources research
727
COCONUT GENETIC RESOURCES
Hybrids
MRD x FJT 213 29 0.7
MRD x NLAD 262 27 0.8
MRD x RIT 279 31 1.0
MRD x RTMT 269 33 1.0
Tall
Fiji Tall - Taveuni 240 24 0.7
Fiji Tall - Lakeba 248 29 0.8
Rotuman Tall 261 19 0.6
Renell Island Tall 355 15 0.6
728
CHAPTER 9: Country reports on status of coconut genetic resources research
729
COCONUT GENETIC RESOURCES
New collections
The new collections will be evaluated and characterized and multiplied
for future breeding work. Most of the new collections made are varieties
suitable for value adding, the potentials of which will be exploited.
Coconut rehabilitation
The results of the germplasm evaluation work will be used for selecting
materials for replanting, as the cyclone of 2003 served as a test in
determining the cyclone tolerance of the varieties existing in our
collection.
References
Marechal, H. 1928. Observation and preliminary experiments on the
coconut palm with a view to developing improved seed for Fiji. Fiji
Agri. Journal 1:16-45.
Mc Paul, JW. 1964. Coconut growing in Fiji. 2nd edition. Bulletin # 38,
Department of Agriculture, Fiji. 78p.
730
CHAPTER 9: Country reports on status of coconut genetic resources research
Parham, RW. 1960. Coconut and Breadfruit surveys of the South Pacific
Region. South Pacific Commission, Technical Information # 1,
Noumea, New Caledonia.
Harries, HC. 1978. Evolution, dissemination and classification of Cocos
nucifera L. Botanical Review. 44:265-320.
Manciot, R and P Sivan. 1988. Coconut hybrids for the South Pacific
Islands. In: Coconut breeding and management. Proceedings of the
National Symposium, 23-26 November 1988. Kerala Agricultural
University, Vellanikara, Trichur, India. 380p.
Vernon AJ, PN Emose and T Mudaliar. 1975. Coconut varietal selection
and breeding, Part 2: Recent work in Fiji. Fiji Agric. Journal 37:47-52.
Annual Coconut Research Reports. 1986-1999. MASLR, Fiji.
731
COCONUT GENETIC RESOURCES
South Pacific
Status of coconut genetic resources research
in Kiribati
M Tenang
Chief Agricultural Officer, Ministry of Natural Resources Development, Kiribati
Introduction
Coconut dominates agricultural production in Kiribati as the crop
provides one of the main components of the people’s daily diet as well as
drinks, copra for export, timber for construction, leaves for thatching,
string and materials for handicrafts (Trewen 1985; Edward 1989; Beenna
2001). Edward (1989) commented that the total number of indigenous
coconut plant species in Kiribati is very low, which is a reflection of the
isolated location of the islands coupled with the infertility of the soil.
Barr (1992) stated that 80% of the land area of the main Gilbert Group,
where 93% of the population lives, is covered with coconut. The
Agricultural Division has, for the last 30 years, conducted extensive
research on coconut with assistance from the British Government. The
emphasis on coconut improvement has been in response to the perceived
importance of the coconut and its products in the lives of the people of
Kiribati. The objective of most of the researches conducted has been
confined to increasing coconut yields. Hence, two large-scale coconut
plantation improvement schemes were devised; one aimed at improving
traditional palm groves and the other targeted at rehabilitation and
replanting.
These coconut plantation improvement schemes mainly involved
improving the quality of existing stands of traditional palm groves with
reasonable density (Barr 1992). Thinning of over-dense areas was done
by poisoning senile palms and non-productive ‘self-seeded’ younger
palms. The scheme was terminated in the early 1970s as it was exhausting
resources. In addition, data recording was very poor and could not be
used to justify the continuation of the activities.
Past coconut replanting schemes focused on replanting areas with
less than 49 palms per hectare. The result of the scheme was quite
disappointing as the actual production per hectare was far below
expectations (Barr 1992). The problem was aggravated by poor or
unsuitable planting sites, most of which were hard-pan or waterlogged.
732
CHAPTER 9: Country reports on status of coconut genetic resources research
Experimental studies
Coconut management trials were carried out at different locations to
address the problems encountered in implementing the two plantation
improvement schemes previously mentioned. It was anticipated that the
resulting recommendations would then be demonstrated and transferred
to smallholder farmers to help them rehabilitate their old palms, including
replanted farms in order to increase yields (Trewen 1986; Barr 1992).
Basic NPK requirements. Two trials were carried out to determine the
optimal NPK combinations for coconut growing in the atolls under
marginal and normal soil conditions. The treatments were combinations
of annual applications of 0, 1, 2, or 3 kg/palm of potassium chloride
(KCl) fertilizer; 0 or 1 kg/palm of triple superphosphate fertilizer; and 0,
1, 2, 3 kg/palm of IBDU (N) fertilizer. All palms tested also received a
trunk injection of iron sulphate at the start of the trial. The results
suggested that potassium was the most important nutrient for marginal
soil areas and K deficiency could be corrected within three years by
applying 1 kg KCl/palm/year. It was also found that nitrogen application
increased coconut yields.
Manganese, copper and zinc trials. The trial examined the requirement
for Mn (0 or 20 g/palm), Zn (0 or 8 g/palm), and Cu (0 or 3 g/palm)
when applied with Fe and their interactions with applications of NPK.
All the palms tested received a basal dressing of iron sulphate by trunk
injection at the start of the trial. The results showed that there should be
an optimum balance of Fe, Mn, Zn and Cu in order to promote good
plant growth and production. It was also found out that Cu interacts
with N to increase yields, while proper Cu and Mn combination improves
N assimilation.
Trace elements and application trial for coconut seedlings. The trial
investigated the optimum method for giving seedlings a long-term supply
of Fe at the time of planting and also examined whether other trace
733
COCONUT GENETIC RESOURCES
elements are required other than Fe. The trace element compounds used
consisted of iron sulphate (75%), manganese sulphate (15%), zinc
sulphate (7%) and copper sulphate (3%).
The compounds were applied using two doses of FeSO4 (50 g and 375 g),
following two different methods of application (applied to the husk of a
seedling or buried near the seedling). For good growth, it was
recommended that 50 g of FeSO4 be applied to the husk while 200 g is
recommended if the soil-covered method was followed.
Iron application trial. The trial compared the effect of four different
iron compounds: iron sulphate, chelated iron, fritted iron (iron in glass)
and iron fillings. The results showed that chelated iron was the fastest
acting compound followed by iron sulphate, iron fillings and fritted iron.
Application of iron compounds corrected iron deficiency and improved
coconut growth.
Establishment of genebanks
A genebank has been set up in the Central Nursery. The hybrids were
collected from different locations (islands) in Kiribati, including South
Tarawa. Since studies have shown that Tall varieties in the country are
not in danger of genetic erosion, the collecting focused more on Dwarf
cultivars found in the country. How Dwarf varieties were introduced
into the country remains a mystery. Some people surmise that these
varieties were brought in illegally from neighbouring countries, as
perceived from the local names given to these varieties. Dwarf varieties
are sought after because they flower early (most within three years), they
are suitable for making toddy and are high-yielding which can supply
tendernut for drinking and are easy to manage. Given these qualities,
selected Dwarf varieties are being used in breeding programmes to
produce Dwarf x Tall hybrids. It is envisioned that the genebank would
continue to supply planting materials to the public and serve as a
conservation area for the collected varieties.
734
CHAPTER 9: Country reports on status of coconut genetic resources research
Capacity building
A coconut expert visited the country to assist in training the national
coconut programme coordinator and to characterize existing coconut
germplasm collections and set up a coconut germplasm conservation site
in the country. Two local research officers have also been sponsored by
COGENT to undergo staff development training on the use of the
STANTECH (Standardized research techniques in coconut breeding)
Manual in 1996 and 1999.
References
Barr, J. 1992. Coconut improvement in Kiribati. A guide to coconut re-
search development in Kiribati, 1960-1992. Ministry of Natural Re-
sources Development, Kiribati.
Beenna, TI. 2001. Studies on composts and the effects of composted or-
ganic matter applications on the productivity of a coralline soil. Uni-
versity of the South Pacific Library, Suva, Fiji.
Edwards, S. 1989. Annual technical report on coconut research in Kiribati
1988-1989. Ministry of Natural Resources Development. Kiribati.
Purseglove, JW. 1988. Tropical crops monocotyledons. Longman
735
COCONUT GENETIC RESOURCES
736
CHAPTER 9: Country reports on status of coconut genetic resources research
South Pacific
Status of coconut genetic resources research
in Papua New Guinea
M Faure
Coconut Breeder, Cocoa and Coconut Institute (CCI), Stewart Research Station, Madang
Province, Papua New Guinea
Introduction
The PNG Cocoa and Coconut Research Institute (PNG-CCRI), established
in 1986, is the research arm of the cocoa and coconut industries in the
country. Priority research is currently focused on breeding, entomology,
downstream processing, agronomy and farming system.
In the 1970s, a number of exotic coconut populations were brought
into PNG, initially as planting material. These include Malayan Red and
Yellow Dwarf (MRD and MYD), Renell Island Tall (RIT), West African
Tall (WAT) and the Solomon Islands Tall populations. The MRD and
RIT populations were used to produce the MAREN hybrid which is known
to yield higher copra than either of its parents in the Solomon Islands
where it was initially developed (Foale 1987). The MAWA (PB121) hybrid
was also introduced for planting because of high yield performance as
observed in the Ivory Coast. Unfortunately, these two hybrids did not
perform well in PNG. The MAWA hybrid was not accepted by the
growers as it produced small nuts compared to the local populations.
They believe that large but fewer nuts involve less labour while still giving
similar copra yield as that from palm with smaller but more numerous
nuts. The local people have always preferred bigger fruits for drinking
and they also seem to prefer the solid endosperm of the local types, which
were considered sweeter and tastier than the MAWA hybrid.
When the MAREN hybrid was introduced to growers during the
1970s, it was found to be susceptible to three insect pests, namely: Scapanes
australis (beetle), Oryctes rhinoceros (rhinoceros beetle) and Rhynchophorus
bilineatus (black palm weevil). These three species are endemic only to
the island provinces of PNG where the bulk of the copra is produced.
The hybrid trial in the Gazelle Peninsula was devastated by these insect
pests. The growers then reverted to picking seednuts from the best palms
among the local open-pollinated Tall palms. Breeding work in the 1970s
developed Dwarf x Tall hybrids with local Tall, with Karkar Tall (KKT)
and Markham Valley Tall (MVT) as the pollen donors. These hybrids
were then planted out in progeny trials throughout the country using
the MAREN hybrid and RIT as controls. However, the results of the
737
COCONUT GENETIC RESOURCES
738
CHAPTER 9: Country reports on status of coconut genetic resources research
Farmers’ varieties
The use of farmers’ varieties in the national breeding programme has
great potential but is not fully explored, except under an ACIAR-funded
project on germplasm survey which was conducted from 1987 to 1992.
Potential local varieties will be surveyed and either pooled or catalogued
collections conserved on farm for future requirements. However, such
system of conservation is unpredictable as the farmer could replace the
accession with other varieties. One way to safeguard this would be to
enable the farmers to conserve the accession by providing some sort of
incentives like production of high-value products from the conserved
genetic materials.
The scattered coconut palms on the fringes of the mainland and
outlying atolls of the country are in danger of being swept away by rising
sea levels. These germplasm would be a priority for possible
characterization, collecting and conservation. The inhabitants of some
atolls depend on coconut for their entire livelihood, e.g., Motlok atolls in
North Solomon Province, and they have special varieties cultivated for
food and artefacts. The sweet husk variety is one of the varieties.
Some innovative farmers or large landholders have or may have done
their own selections of good performing varieties that need to be sampled
for direct use (pollen) or for conservation and further evaluation and
utilization. Such populations need to be considered in the national
breeding programme.
Synthetic varieties
The development of synthetic varieties is being explored to utilize the
promising Tall populations to generate Tall composite hybrids. Experience
and models for synthetic varieties developed in the Philippines will be
used in the PNG breeding programme. This programme will use the
739
COCONUT GENETIC RESOURCES
Capacity building
Technical assistance
Since 1994, specialists, supported by COGENT/IPGRI, have provided
technical assistance missions to help CCI/CCRI enhance coconut
research. These missions included assessing the country’s coconut R&D
capability, identifying common problems and opportunities for network
collaboration, identifying a suitable site for the ICG-SP, evaluating embryo
culture laboratories, evaluating germplasm collecting and conservation
strategies, assessing the pest risks for the ICG, and assisting in the
establishment of ICG-SP.
COGENT meetings/workshops
In 1998, a meeting and a workshop were held in PNG, including the 7th
COGENT Steering Committee Meeting which was held in Madang. The
meeting further endorsed the country, through CCRI, as the host of the
ICG-SP.
Research projects
A total of 12 coconut research and development projects have either
been completed or are underway in the country, with CCRI as the lead
implementing agency.
740
CHAPTER 9: Country reports on status of coconut genetic resources research
741
COCONUT GENETIC RESOURCES
MOA establishing the ICG-SP. Since then, more accessions have been
collected and conserved in the regional genebank. In 2000, CIRAD, in
collaboration with the Secretariat of the South Pacific (SPC) and
COGENT, collected coconut germplasm from atolls of Cook Islands,
Marshall Islands, Kiribati and Tuvalu. These were cultured at SPC in Fiji
and transferred to ICG-SP for in vitro culture and eventual conservation.
If funds are available, PNG-CCRI will organize a collecting team to visit
other germplasm centres of the donor-member countries to collect their
designated germplasm.
Planned activities
Site establishment
A new area has been identified and being prepared as part of the PNG’s
commitment to expand the coconut breeding programme. Major field
preparation activities include brushing, felling, drainage and cover crop
planting.
Table 1. Schedule of germplasm planting in the ICG-SP for the next seven years
Year 0 1 2 3 4 5 6 7 Total
No. of 54 75 96 117 138 159 180 200 200
germplasm
Budget 1272 1776 2280 2784 3288 3792 4296 4800 4800
(US$)
Note: Zero year means germplasm currently conserved in the field genebank at ICG-SP
Germplasm management
This activity will include in vitro culture of imported germplasm, growth
and management in culture room until potting and acclimatization stage.
Also the poly bag nursery maintenance until the field planting stage.
Field genebank management includes weed control, pest management,
drainage and general field upkeep. Income generation from the sale of
dry nuts and intercrops is part of the management activities to augment
the ICG-Management Fund. The trust account is being organised for the
management fund and for future donor funding.
742
CHAPTER 9: Country reports on status of coconut genetic resources research
References
Faure, MG and JE Moxon. 1998. Coconut Breeding. Pp. 73-18. In: PA
Batugal and V Ramanatha Rao (eds). Proceedings of a Workshop on
the Standardization of Coconut Breeding Research Techniques, 20-
25 June 1994. COGENT, IPGRI-APO, Serdang, Selangor, Malaysia.
Faure, MG. 2003. International Coconut Genebank Progress Report 2003.
Foale, MA. 1987. Coconut germplasm in the Pacific islands. ACIAR Tech-
nical Report Series No. 4. Australian Centre for International Agri-
cultural Research, Canberra, Australia.
Ovasuru, T, GY Tan and LA Bridgland. 1993. Coconut germplasm
collection in Papua New Guinea. Pp. 33-41. In: MK Nair, HH Khan,
P Gopalasundaran and EVV Bhaskara Rao (eds). Advances in coconut
research and development. Oxford and IBH, New Delhi, India.
743
COCONUT GENETIC RESOURCES
South Pacific
Status of coconut genetic resources research in
Samoa
A Peters1 and K Jayashree2
1
Assistant Chief Executive Officer, Crop Division, Ministry of Agriculture, Forests,
Fishery and Meteorology, Apia, Samoa
2
Scientific Assistant, International Coconut Genetic Resources Network (COGENT),
International Plant Genetic Resources Institute - Regional Office for Asia, the Pacific
and Oceania (IPGRI-APO), Serdang, Selangor, Malaysia
Introduction
Coconut is the most predominant crop grown in Samoa. Its traditional
value and multipurpose uses make it one of the most important crops in
the everyday lives of Samoans as an important source of food and cash.
In 1996, Samoa exported coconut food products such as coconut cream,
copra, copra meal and coconuts, worth SAT 3.598M (US$ 1.3M). The
Agricultural Census (1989) stated that 96% of farmers’ holdings grew
coconuts, which bring to a total land area of 27 692 ha. In Samoa, one of
the most important crop mixtures being identified is coconut intercropped
with cocoa, the others being crops like banana and taro (Agricultural
Census 1999). However, due to price fluctuations of coconuts all around
the world, there is a need to upgrade and improve approaches in coconut
farming and encourage adoption of new production and processing
technologies to enhance farmers’ incomes.
744
CHAPTER 9: Country reports on status of coconut genetic resources research
745
COCONUT GENETIC RESOURCES
746
CHAPTER 9: Country reports on status of coconut genetic resources research
747
COCONUT GENETIC RESOURCES
South Pacific
Status of coconut genetic resources research
in Tonga
P Taufatofua1 and K Jayashree2
1
Head of Research, Ministry of Agriculture and Forestry, Vainani Research Division,
Nuku’alofa, Tonga
2
Scientific Assistant, International Coconut Genetic Resources Network (COGENT),
International Plant Genetic Resources Institute - Regional Office for Asia, the Pacific
and Oceania (IPGRI-APO), Serdang, Selangor, Malaysia
Introduction
Coconut is an important crop which has supported the livelihoods of the
Tongan people for hundred of years. Lately, Tongan coconut farmers
have been suffering from declining productivity and unstable markets of
copra and coconut oil, traditional products derived from the coconut.
Tongan farming systems are basically multi-storied and agro-forestry
based, with root crops and other crops as the common intercrops. Farmers
in the country are willing to learn and adopt new and more efficient
farm management strategies and approaches to improve their existing
coconut-based farming system.
748
CHAPTER 9: Country reports on status of coconut genetic resources research
749
COCONUT GENETIC RESOURCES
South Pacific
Status of coconut genetic resources research
in Vanuatu
JP Labouisse1 and J Lahva2
1
Coconut Breeder, Centre de Coopération Internationale en Recherche Agronomique pour
le Développement - Vanuatu Agricultural Research and Technical Centre (CIRAD-
VARTC), Santo, Vanuatu
2
Agronomist, Department of Agriculture and Rural Development, Port-Villa, Vanuatu
Introduction
Vanuatu, formerly called New Hebrides, is an archipelago located in the
Southwest Pacific Ocean between the Solomon and Fiji Islands. It consists
of some 80 widely dispersed islands between the Torres Group (13°S) to
the uninhabited Matthew and Hunter islets (22°S). As in most of the
Pacific Island countries, coconut is widely planted and used by the rural
populations for food and for numerous other domestic purposes. The
production of copra started in the 1870s and was the mainstay of
Vanuatu’s economy until the 20th century. Even when world demand
and prices for the product declined, copra remained as the most important
export commodity of the country, with around 30 000 metric tonnes
exported annually. Coconut is grown in an estimated 90 000 ha,
representing nearly 60% of the total cultivated area in the country.
On the southeast coast of Espiritu Santo Island, near the village of
Saraoutou, a coconut research station was established in 1962. Up to
2001, the station was managed by the French research organization
Institut de Recherches pour les Huiles et Oléagineux (IRHO), which
became the Centre de Coopération Internationale en Recherche
Agronomique pour le Développement (CIRAD) in 1985. The Saraoutou
Research Centre is now called the Vanuatu Agricultural Research and
Technical Centre (VARTC).
750
CHAPTER 9: Country reports on status of coconut genetic resources research
751
COCONUT GENETIC RESOURCES
Table 1. Comparative performance of three cultivars in Vanuatu for yield and copra
processing
VTT x VRD x
Characteristics VTT
RIT VTT
Average annual yield under farmers’ field conditions as evaluated 2.0 2.6 2.2
from 1994 to 1997 (tonnes)
Average copra content per nut as measured from 1994 to 2000 (in 199 258 134
grams)
Percentage of oil in albumen dry matter 66.2 66.0 65.4
752
CHAPTER 9: Country reports on status of coconut genetic resources research
753
COCONUT GENETIC RESOURCES
Table 2. List of the common uses of and products from the coconut as surveyed in
the villages of Vanuatu
(Source: Lahva and Labouisse 2000)
Coconut part Uses and products
Whole palm • Land marking
• Garden ornamentation
• Cattle shade
Water • Beverage
• Medical and ’magic‘ uses (excipient)
Albumen • Food
• Copra
Milk • Food
• Medical uses (excipient)
Oil • Food
• Oil for human body and hair conditioning
• Fuel (for lamp)
the IFAD-funded project, the quality of the fruits of these three varieties
was also evaluated for copra production and processing (Lahva and
Labouisse 2000). Results showed that the hybrid VTT x RIT outperformed
the two other varieties in terms of nut yield and copra production (Table
1).
754
CHAPTER 9: Country reports on status of coconut genetic resources research
Participating Vanuatu
COGENT training courses organized outside Vanuatu
researchers
Coconut collecting and conservation course (PCA, Philippines, Godefroy Buletare
1-12/9/1997)
Computer use, documentation and data analysis course for Godefroy Buletare
South Pacific (SPC, Suva, Fiji, 3-7/8/1998)
755
COCONUT GENETIC RESOURCES
100
Percentage of felt trees
80
60
40
20
0
TACD VRD SYD CRD NLAD PILD CATD THD MBD BGD MRD AROD MYD
Varieties
Figure 1. Damage inflicted by cyclone Dani (January 1999) on the different Dwarf
varieties (aged 15) in the VARTC genebank.
756
CHAPTER 9: Country reports on status of coconut genetic resources research
757
COCONUT GENETIC RESOURCES
758
CHAPTER 9: Country reports on status of coconut genetic resources research
759
COCONUT GENETIC RESOURCES
References
Baudouin, L and P Lebrun. 2002. The development of a microsatellite kit
for use with coconuts. Centre de Cooperation Internationale en Re-
cherche Agronomique pour le Développement, Montpellier, France.
Bourdeix, R, L Baudouin, J Ollivier and JP Labouisse. 1999. COGENT
consultancy report on coconut collecting strategy. Centre de
coopération Internationale en Recherche Agronomique pour le
Développement (CIRAD), Montpellier, France.
Bule, F. 2000. Socioeconomic survey on marketable crops and livestock
under coconuts. In: J Lavah and JP Labouisse (eds). Enhancing farm-
ers’ incomes and germplasm conservation through coconut based
farming system and identification of varieties for multipurpose use.
Final project report. DARD, Port-Vila, Vanuatu.
Caillon, S. 2001. Gestion traditionnelle et conservation in situ: cas du
cocotier Cocos nucifera et du taro Colocasia esculenta au nord du
Vanuatu. Projet de thèse. Université d’Orléans, France.
Caillon, S and EF Malau. 2002. Catalogue of coconuts and taros of the
West Coast of Vanua Lava.
Julia, JF. 1982. Myndus taffini (Homoptera Ciixidae), vecteur du
dépérissement foliaire des cocotiers au Vanuatu. Oléagineux 37 8-
9:409-414.
Labouisse, JP. 2002. Hybrids trials of the Pacific Regional Agriculture
Programme. Progress report, January 2002. Vanuatu Agricultural
Research and Training Centre, Santo Vanuatu.
Labouisse, JP and R Bourdeix. 2003. Coconut germplasm collecting, char-
acterization and conservation in Cook Islands, Kiribati, Marshall Is-
lands and Tuvalu. Final report. March 2003. Vanuatu Agriculture
Research and Training Center, Santo, Vanuatu.
Labouisse, JP and G Buletare. 1997. Evaluation of selected coconut culti-
vars planted in farmers’ fields in Vanuatu: COGENT - CGRNAP
760
CHAPTER 9: Country reports on status of coconut genetic resources research
761
COCONUT GENETIC RESOURCES
Index
A
Accessions conserved in the Southeast Asian Region 533
AFLP 229. See also Amplified Fragment Length Polymorphism
Africa and Indian Ocean, Research on coconut genetic resources in
546
Africa and the Indian Ocean 546
AIO. See Africa and the Indian Ocean
Amplified Fragment Length Polymorphism 229
Area freedom 423
Arthropod pests 415
Assessing the completeness of collecting 59. See also Farmer participa-
tory approach
Assessing the reasons for, extent and danger of genetic erosion 59. See
also Farmer participatory approach
B
Bangladesh, Status of coconut genetic resources research in 596
Biochemical and molecular methods for characterizing coconut diver-
sity 225-243
Different genetic markers 225
Biochemical markers 226
Molecular markers 227
Choice of markers to be used 232
Results 236
Biofuels Project, SPC 521
Brazil, Status of coconut genetic resources research in 695
Bursaphelenchus. See Nematode disease
C
Cadang-cadang 377
Candidate-gene approach 271. See also Molecular markers for coconut
improvement
Catalogue of coconut food recipes 466
Catalogue of conserved germplasm and farmers’ varieties 456
762
Index
763
COCONUT GENETIC RESOURCES
Agroclimatic 305
Farmers’ preferences 306
Coconut hybrids for smallholders 449
Coconut in Africa, History of 546
Coconut is good for your health, CD-ROM 449
Coconut lethal yellowing 349
Geographic distribution 349
Symptoms 349
Causal agent 350
Transmission 351
Diagnosis and detection 353
Spread 354
Control methods 355
Coconut lethal yellowing in Jamaica 364
History of LY in Jamaica 364
Searching for the cause 365
Living with LY before 1961 366
Living with LY after 1961 366
Current status of LY and future prospects 368
Coconut micropropagation 334-342
Research from the 1970’s to the 1990’s 334
Recent advances 338
Perspectives and conclusion 341
Coconut microsatellite kit 232
Coconut productivity in farmers’ field and research 307
Coconut Research for Development Programme 500
Goal and objectives 502
Priority research areas 503
Organizational structure 504
Programme coordination 505
Cocos 13
COGENT. See International Coconut Genetic Resources Network: Its
history and achievements
COGENT member countries 106, 190, 483
COGENT Newsletters 450
COGENT publications and other PA materials 443
COGENT publications and other public awareness materials 443
COGENT, Objectives of 107
COGENT’s public awareness strategy 440
Complementary conservation of coconuts 75
Complementary conservation strategy of coconut germplasm 83
Complementary conservation strategy, Considerations for 79-83
Costs and risks 82
764
Index
Genetic diversity 79
Infrastructure 80
Network 81
Policy/Legal issues 82
Socioeconomic aspects 81
Stakeholders 80
Complex hybrids 258. See also Conventional breeding schemes
Conservation of coconut germplasm in field genebank, Considerations
for 92
Agronomic considerations 96
Genetic considerations 92
Germplasm health issues 100
Legal issues 99
Policy and management issues 98
Conservation in the multi-site ICG 109
Conservation methods for coconuts, Advantages and 86
Conservation objective 79
Conservation options for coconuts, Comparison of 85
Conservation strategy of COGENT 108
Conserving coconut germplasm, Methods for 76
Consultative Group on International Agricultural Research 473
Conventional breeding schemes 254-259. See also Conventional coco-
nut breeding
Mass selection methods 254
Other intra-population breeding methods 255
Conventional coconut breeding 251-264
Population base 252
Conventional breeding schemes 254
Status of coconut improvement 259
Breeding limitations and opportunities 261
Farmers’ varietal preferences 263
Future breeding plans 264
Cook Islands, Status of coconut genetic resources research in the 720
Coronie wilt. See Phytomonas
Côte d’Ivoire, Status of coconut genetic resources research in 654
Country reports on status of coconut genetic resources research 571
Cryopreservation, Definition of 143
Cryopreservation research in coconut, Status of 142
Immature embryos 144
Mature embryos 144
Plumules 145
Prospects 146
Cultivar 9
765
COCONUT GENETIC RESOURCES
D
Deciding what to collect and how 59. See also Farmer participatory
approach
Definition of terms and nomenclatures 9
Diagnostic tests, Pest risk assessment 423
Dip 423
Diseases of unknown origin 399, 402
Distribution 6
DIVA-GIS 23. See also Geographic Information System (GIS)
DIVA-GIS 35
Diversity 2
Diversity indexes 217. See also Morphometric methods of determining
diversity in coconuts
Documenting and using the collection 59. See also Farmer participa-
tory approach
Drought stress. See Drought tolerance in coconut
Drought tolerance in coconut 282-295
Scientific and theoretical basis 282
How serious is the problem? 282
Environmental factors 283
Impact of drought stress 284
Role of K+ and Cl- nutrition 288
Screening for drought tolerance 288
Drought tolerance mechanism 290
Genetics of drought tolerance in coconut 291
Methodology for screening 291
Constraints and opportunities 295
Dynamis borassi. See Nematode disease
E
Ecotype 9
ECW. See Epicuticular wax
Electron microscopy 379
Embryo explants, Use of 336. See Coconut micropropagation
Epicuticular wax 286
Ethnobotany 5
Euclidean distance. See Mahalanobis distance
Evaluation descriptors, CGRD 433
Evolution of the coconut palm 1
766
Index
F
Farmer participatory approach 58
Farmer participatory approach in coconut germplasm 58
Farmer participatory approach, Importance in collecting 59
Farmer participatory research on coconut diversity 446
Fatal wilt. See Phytomonas
FGB, Steps in establishing, maintaining and managing 101
FGB. See Field genebanks
Field genebanks 91
Fiji, Status of coconut genetic resources research in 725
Framework for complementary conservation strategy 83
Framework for developing a complementary conservation strategy 87
Fumigation: 423
Fungal diseases 416
Fungal diseases of coconut 398, 401
G
Gaps in coconut germplasm collecting 46
Gel electrophoresis 378
Geneclass2 software 234. See also Geneclass2 software performance
Geneclass2 software performance 234
General consideration, Coconut genetic diversity 15
Genetic diversity 13
Genetic engineering 339. See Coconut micropropagation
Genetic erosion. See Gaps in coconut germplasm collecting
Genetically-modified organisms 272. See also Molecular breeding in
coconut
Geographic Information System 23
Geographical gap-filling. See Gaps in coconut germplasm collecting
Georeferencing coconut accessions 32
Georeferencing of coconut accessions in CGRD 33
Germplasm conserved in the multi-site ICG 113
Germplasm exchange, Risks linked to 403-404
From African/Indian Ocean countries to Côte d’Ivoire 403
From Brazil to the other countries of Latin America 404
From Côte d’Ivoire to African/Indian Ocean countries 403
From Latin American/Caribbean countries to Brazil 404
Germplasm health 392
Germplasm health management for COGENT’s multi-site International
Coconut Genebank 448
767
COCONUT GENETIC RESOURCES
H
Hartrot. See Phytomonas
Helminthosporium halodes (Dresch.) 399
Hemileia vastatrix 390
Hurricane tolerance in coconut 561
I
ICG, Plan of action 112
ICG. See International Coconut Genebank
ICG-AIO, Designated germplasm for 140
ICG-AIO. See International Coconut Genebank for Africa and Indian
Ocean
ICG-LAC. See International Coconut Genebank for Latin America and
Caribbean
ICG-SA, Designated germplasm for 137
ICG-SA. See International Coconut Genebank for South Asia
ICG-SEEA, Designated germplasm for 138
ICG-SEEA. See International Coconut Genebank for Southeast and
East Asia
ICG-SP. See International Coconut Genebank for the South Pacific
ICG-SP. See International Coconut Genebank for the South Pacific
Improving location of diversity 21
In vitro collecting of coconut germplasm 65
In vitro collecting protocols developed by Assy-Bah et al. 67
In vitro culture of embryos 69
In vitro culture, sequence of operations 66
In situ conservation of coconut diversity 149-155
768
Index
J
Jamaica, Coconut lethal yellowing in. See Coconut lethal yellowing in
Jamaica
Jamaica, Status of coconut genetic resources research in 715
769
COCONUT GENETIC RESOURCES
K
Kenya, Status of coconut genetic resources research in 682
Kiribati, Status of coconut genetic resources research in 732
L
LAC. See Latin America and the Caribbean
Latin America and the Caribbean 557
Latin America and the Caribbean, Research on coconut genetic re-
sources 557
LAVPD. See Leaf to air vapour pressure deficit
Leaf to air temperature difference 285
Leaf to air vapour pressure deficit 285
Leaf water potential 285
Lethal yellowing disease 390
Lethal yellowing. See Coconut lethal yellowing
Lethal yellowing. See Coconut lethal yellowing in Jamaica
Lethal yellowing-like disease. See Coconut lethal yellowing
Linkage mapping 269. See also Marker-assisted selection in coconut
Locating and accessing target areas and material 59
Locating and collecting germplasm 11
Locating coconut genetic diversity 13
Losses from existing ex situ collections. See Gaps in coconut germplasm
collecting
LY. See Coconut lethal yellowing
LYD. See Lethal yellowing disease
M
Mahalanobis distance 215 See also Morphometric methods of deter-
mining diversity in coconuts
Main elements of a GIS 23
Major pests and safe movement of germplasm 347
Malaysia, Status of coconut genetic resources research in 634
Manual on Standardized Research Techniques (STANTECH) 444
Manual on technical writing, public awareness, seminar presentation
and proposal preparation for coconut researchers 449
Mapping coconut diversity for nut weight in the Ph 25
Mapping collection sites 35
770
Index
771
COCONUT GENETIC RESOURCES
N
National collections in CGRD, List of 193
Nematode disease 382
Nematode disease: Red Ring 382
Nematode diseases 402
Nigeria, Status of coconut genetic resources research in 667
O
On-farm conservation programme, Criteria for site selection 152-155
Diverse use values 153
Ecosystems. 153
Farmers and communities 153
Genetic erosion 153
Intra-specific diversity within target species 153
Logistics 153
Partners 153
Specific adaptations 153
Osmotic adjustment 286
Other explants (leaf and inflorescence), Use of 339. See Coconut
micropropagation
772
Index
P
PA. See Public awareness initiatives in coconut. See also Information,
public awareness, institutional support and partnerships
Pacific Agricultural Plant Genetic Resources Network 521
Pakistan, Status of coconut genetic resources research in 604
PAPGREN. See Pacific Agricultural Plant Genetic Resources Network
Papua New Guinea, Status of coconut genetic resources research in
737
Partner institutions in COGENT member countries 497
Pathogen characterization 375, 378, 381
PEQ. See Post-entry quarantine
Performance of coconut hybrids in Asia, Africa and Latin America
302-308
Promising hybrids 302
Conditions favouring coconut hybrid performance 305
Narrowing the technology gap 306
Conclusion 307
Performance evaluation of coconut varieties and farmers’ varietal
preferences 309-323
High-yielding varieties and hybrids 310
Findings of 1980 and 1988 assessment of new varieties 313
Summary of major findings of the 1998 varietal assessment study
315
Conclusion and recommendations 321
Performance of high-yielding coconut varieties/ hybrids 446
Pest risk analysis 411
Pest risk analysis and guidelines for the safe movement of germplasm
in the ICG of Asia and the Pacific 411
Pest Risk Analysis process 412
Management of quarantine pest groups 415
General phytosanitary measures for the movement of coconut
germplasm 417
Pest Risk Analysis process 412. See also Pest risk analysis and guide-
lines for the safe movement of germplasm in the ICG of Asia and
the Pacific
Phase 1: Initiating the PRA 412
Phase 2: Pest risk assessment 413
Phase 3: Pest risk management 415
Pest risk assessment 396
Pest risk assessment in Brazil 402
Pest risk assessment in Côte d’Ivoire 399
Pest risk assessment of COGENT’s multi-site ICG 395
773
COCONUT GENETIC RESOURCES
774
Index
775
COCONUT GENETIC RESOURCES
Q
Q factor 37. See also Mapping morphometric characteristics
QTL. See Quantitative trait loci
Quantitative trait loci 269. See also Molecular genetics related to
coconut improvement
R
Randomly Amplified Polymorphic DNA 229
RAPD. See Randomly Amplified Polymorphic DNA
Rapid diagnosis assay 379
Red Ring. See Nematode disease
Regional network reports 511
Related palm species. See Gaps in coconut germplasm collecting
Restriction Fragment Length Polymorphism 228
RFLP. See Restriction Fragment Length Polymorphism
Rhycopophorus palmarum. See Nematode disease
Root-shoot signals 286
776
Index
S
Samoa, Status of coconut genetic resources research in 744
Schematic diagram for screening drought tolerant coconut varieties
293
Scope and status of coconut conservation 191-202
Conservation in COGENT’s multi-site International Coconut
Genebank 192
In vitro embryo culture and cryopreservation 196
In situ and on-farm conservation 198
Promoting conservation through use 199
Secretariat of the Pacific Community 514
SEEA Network member countries 543
SEEA Network, COGENT member countries 543
SEEA. See Southeast and East Asian region
Seychelles, Status of coconut genetic resources research in 691
Shannon-Weaver index. See Diversity indexes
Simpson index. See Diversity indexes
Single cross hybrids 255. See also Conventional breeding schemes
Single Nucleotide Polymorphism 231
SNP. See Single Nucleotide Polymorphism
South Asia sub-regional network 524
South Asia, Research on coconut genetic resources in 524
South Pacific, Research on coconut genetic resources 513
Southeast and East Asia (SEEA) sub-regional network 533
Southeast and East Asia, Area and production of coconut in 533
Southeast and East Asia, Research on coconut genetic resources in
533
Southeast and East Asian region 533
SPC. See Secretariat of the Pacific Community
Sri Lanka, Status of coconut genetic resources research in 581
SSR. See Microsatellites or Simple Sequence Repeats
Status of coconut germplasm collecting 44
Status of work on in vitro collecting of coconut germplasm 65
Stomatal regulation 285
Strategies for safe movement of coconut germplasm 390
Strategy in coconut germplasm collecting 53
Sustainable livelihoods framework, Five capitals 169-172
Financial capital 172
Human capital 169
Natural capital 170
Physical capital 171
Social capital 170
777
COCONUT GENETIC RESOURCES
T
TAC. See Technical Advisory Committee
Tanzania, Status of coconut genetic resources research in 670
Targeted surveys and under-represented phenotypes. See Gaps in
coconut germplasm collecting
Taxonomy 2
Technical Advisory Committee 474
Technical guidelines for the safe movement of coconut germplasm 393
Thailand, Status of coconut genetic resources research in 618
The Coarse Grid Strategy 54. See also Strategy in coconut germplasm
collecting
The farmer participatory approach. See Strategy in coconut germplasm
collecting
The International Coconut Genetic Resources Database 443
Tinangaja 377
Tonga, Status of coconut genetic resources research in 748
Treatment recommendations, Pests 423
Treatments, Pest 418
“True” Varieties 10. See also True variety
True variety 9. See also True variety
U
Understanding the origin and distribution of diversity 59. See also
Farmer participatory approach
Use of Isozymes 18
Use of polyphenols 20
Using GIS tools 23. See also Geographic Information System (GIS)
V
Vanuatu Agriculture Research and Training Centre 520
Vanuatu, Status of coconut genetic resources research in 750
Vanuatu wilt 375
Variant 9
778
Index
779
COCONUT GENETIC RESOURCES
780
Index
781