Ecology Letters, (2008) 11: 1252–1264
REVIEW AND
SYNTHESIS
1
Robert L. Sinsabaugh, * Christian
L. Lauber,1 Michael N.
Weintraub,2 Bony Ahmed,3
Steven D. Allison,4 Chelsea
Crenshaw,1 Alexandra R.
Contosta,5 Daniela Cusack,6
Serita Frey,5 Marcy E. Gallo,1
Tracy B. Gartner,7 Sarah E.
Hobbie,8 Keri Holland,9 Bonnie L.
Keeler,8 Jennifer S. Powers,10
Martina Stursova,1 Cristina
Takacs-Vesbach,1 Mark P.
Waldrop,11 Matthew D.
Wallenstein,12 Donald R. Zak13
and Lydia H. Zeglin1
doi: 10.1111/j.1461-0248.2008.01245.x
Stoichiometry of soil enzyme activity at global scale
Abstract
Extracellular enzymes are the proximate agents of organic matter decomposition and
measures of these activities can be used as indicators of microbial nutrient demand. We
conducted a global-scale meta-analysis of the seven-most widely measured soil enzyme
activities, using data from 40 ecosystems. The activities of b-1,4-glucosidase,
cellobiohydrolase, b-1,4-N-acetylglucosaminidase and phosphatase g)1 soil increased
with organic matter concentration; leucine aminopeptidase, phenol oxidase and
peroxidase activities showed no relationship. All activities were significantly related to
soil pH. Specific activities, i.e. activity g)1 soil organic matter, also varied in relation to
soil pH for all enzymes. Relationships with mean annual temperature (MAT) and
precipitation (MAP) were generally weak. For hydrolases, ratios of specific C, N and P
acquisition activities converged on 1 : 1 : 1 but across ecosystems, the ratio of C : P
acquisition was inversely related to MAP and MAT while the ratio of C : N acquisition
increased with MAP. Oxidative activities were more variable than hydrolytic activities
and increased with soil pH. Our analyses indicate that the enzymatic potential for
hydrolyzing the labile components of soil organic matter is tied to substrate availability,
soil pH and the stoichiometry of microbial nutrient demand. The enzymatic potential for
oxidizing the recalcitrant fractions of soil organic material, which is a proximate control
on soil organic matter accumulation, is most strongly related to soil pH. These trends
provide insight into the biogeochemical processes that create global patterns in
ecological stoichiometry and organic matter storage.
Keywords
C : N : P ratio, cellobiohydrolase, ecological stoichiometry, leucine aminopeptidase,
peroxidase, phenol oxidase, phosphatase, soil enzyme activity, soil organic matter,
b-1,4-glucosidase, b-1,4-N-acetylglucosaminidase.
Ecology Letters (2008) 11: 1252–1264
1
8
que, NM, 87131, USA
2
Department of Environmental Sciences, University of Toledo,
Minnesota, 1987 Upper Buford Circle, St Paul, MN 55108, USA
9
Department of Ecology, Evolution and Marine Biology, Uni-
Toledo, OH 43606-3390, USA
versity of California, Santa Barbara, Santa Barbara, CA 93106,
Department of Biology, University of New Mexico, Albuquer-
Department of Ecology, Evolution and Behavior, University of
3
USA
85281, USA
10
4
and Soil, Water & Climate, University of Minnesota, 1987 Upper
School of Life Sciences, Arizona State University, Tempe, AZ
Departments of Ecology and Evolutionary Biology and Earth
Departments of Ecology, Evolution & Behavior, Plant Biology
System Science, University of California, Irvine, CA 92697, USA
Buford Circle, St Paul, MN 55108, USA
5
11
Hampshire, Durham, NH 03824, USA
6
Department of Environmental Science, Policy and Manage-
Menlo Park, CA 94025, USA
12
Natural Resource Ecology Laboratory, Colorado State Univer-
Department of Natural Resources, University of New
United States Geological Survey, 345 Middlefield Rd, MS 962,
ment, University of California, Berkeley, Berkeley, CA 94720, USA
sity, Campus Delivery 1499, Fort Collins, CO 80523-1499, USA
7
13
gram, Carthage College, 2001 Alford Park Drive, Kenosha, WI
Arbor, MI 48109-1115, USA
53140, USA
*Correspondence: E-mail:
[email protected]
Department of Biology and the Environmental Science Pro-
2008 Blackwell Publishing Ltd/CNRS
School of Natural Resources, University of Michigan, Ann
Review and Synthesis
INTRODUCTION
Terrestrial soils contain the largest reservoir of organic
carbon in the biosphere (c. 1800 Pg). Mineralization of this
organic matter by heterotrophic microorganisms affects
global carbon and nutrient cycles, plant production and
atmospheric composition. The proximate agents of soil
organic matter (SOM) decomposition are extracellular
enzymes that deconstruct plant and microbial cell walls
and reduce macromolecules to soluble substrates for
microbial assimilation (Burns 1978; Burns & Dick 2002).
In the context of global nutrient cycles, these enzymes
catalyse processes that are antipodal to C-fixation by
ribulose bisphosphate carboxylase and N-fixation by nitrogenase.
Extracellular enzyme activity (EEA) in soils has been
studied for more than a century with a goal of understanding the biochemistry of decomposition and nutrient cycling
(Skujins 1978). Soil EEA has also been studied in relation to
ecosystem responses to global change and other disturbances (e.g. Lipson et al. 2005; Sinsabaugh et al. 2005; Finzi
et al. 2006). The most widely assayed enzymes are those
involved in the degradation of cellulose and lignin, the most
abundant components of plant litter (Allison et al. 2007).
Other commonly measured enzymes hydrolyze proteins,
chitin and peptidoglycan, which are the principal reservoirs
of organic N (Caldwell 2005). Extracellular phosphatases are
of interest for their role in mineralizing P from nucleic acids,
phospholipids and other ester phosphates (Turner et al.
2002; Toor et al. 2003). The structural heterogeneity of
biopolymers requires the interaction of several classes of
enzymes to reduce them to constituent monomers available
for microbial consumption (Ljungdahl & Eriksson 1985;
Kirk & Farrell 1987; Sinsabaugh 2005). However, most
studies of soil EEA are limited to enzymes that catalyse the
production of the terminal monomers, because the kinetics
are easier to study and the reactions produce assimilable
products (Allison et al. 2007).
Because EEA mediates microbial nutrient acquisition
from organic matter, these activities are commonly interpreted as indicators of microbial nutrient demand (Olander
& Vitousek 2000; Schimel & Weintraub 2003; Caldwell
2005; Moorhead & Sinsabaugh 2006). This demand is
determined by the elemental stoichiometry of microbial
biomass in relation to environmental nutrient availability.
Stoichiometric constraints on biomass composition are
evident for phytoplankton (Redfield 1958), terrestrial plants
(McGroddy et al. 2004) and animals (Sterner & Elser 2002)
as well as soil microbial biomass (Cleveland & Liptzin 2007).
However, within all of these groups, there is variation in
biomass stoichiometry among ecosystems that can be
related to constraints imposed by local nutrient availability.
For example, large-scale variation in the C : N : P ratios of
Stoichiometry of soil enzyme activity 1253
plant foliage is consistent with observations that tropical
forests are generally more P-limited than high-latitude
forests, which tend to be N-limited (McGroddy et al.
2004; Reich & Oleksyn 2004). This pattern arises because
high rates of weathering in tropical regions lead to the loss
of rock-derived nutrients, such as P, while episodic
glaciations in high-latitude regions limit the accumulation
of N (Walker & Syers 1976; Vitousek & Howarth 1991).
Microbial biomass composition does not follow a latitudinal
trend but does vary in relation to ecosystem type (Cleveland
& Liptzin 2007). Because EEA links environmental nutrient
availability with microbial production, large-scale patterns in
EEA may reveal the constraints on microbial biomass
stoichiometry and enzyme relationships to SOM composition.
Large-scale EEA patterns may also provide insights into
the biochemical controls on soil carbon storage. Because
EEA catalyses rate-limiting steps in organic matter degradation, correlations between rates of plant litter decomposition, microbial production and EEA are frequently
observed (Andersson et al. 2005; Sinsabaugh et al. 2005;
Weintraub et al. 2007; Waldrop & Harden 2008). However,
the contribution of these relationships to the global
distribution of SOM has not been evaluated.
Despite thousands of published studies, technological
limitations and lack of standardized protocols have precluded a comparative analysis of the magnitude and
distribution of soil EEA in relation to global climatic and
edaphic gradients. During the past decade, protocols that
combine the use of fluorigenic substrates with high
throughput microplate technology have come into general
use (Sinsabaugh et al. 1997; Marx et al. 2001). As a result, we
can now assemble a comparative database of soil EEA
potentials for 40 ecosystems. These data reveal unexpected
stoichiometric constraints on the functional organization of
microbial communities and the dynamics of SOM accumulation.
METHODS
Data description
Soil, excluding surface litter, was collected at each site to
depths of 5–20 cm, and assayed for the potential activities
of one or more extracellular enzymes. Hydrolytic enzymes
were assayed using substrates linked to a methylumbelliferyl
fluor; oxidative enzymes were assayed colorimetrically using
L-3,4-dihydroxyphenylalanine (Table 1). Activities were
calculated in units of nmol h)1 g)1 dry mass and
nmol h)1 g)1 SOM. Samples were incubated at 20 ±
2 C, except for Niwot Ridge samples, which were
incubated at 15 ± 2 C. To approximate ambient soil pH
(Table 2), acidic soils were assayed at pH 5 by suspending
2008 Blackwell Publishing Ltd/CNRS
1254 R. L. Sinsabaugh et al.
Review and Synthesis
Table 1 Soil enzymes assayed for potential
Enzyme
EC
Abbreviation
Substrate
b-1,4-glucosidase
Cellobiohydrolase
b-N-acetylglucosaminidase
EC 3.2.1.21
EC 3.2.1.91
EC 3.2.1.14
BG
CBH
NAG
Leucyl aminopeptidase
EC 3.4.11.1
LAP
Acid (alkaline) phosphatase
Phenol oxidase
Peroxidase
EC 3.1.3.1
EC 1.10.3.2
EC 1.11.1.7
AP
POX
PER
4-MUB-b-D-glucoside
4-MUB-b-D-cellobioside
4-MUB-N-acetyl-ßD-glucosaminide
L-Leucine-7-amido4-methylcoumarin
4-MUB-phosphate
L-3,4-dihydroxyphenylalanine
L-3,4-dihydroxyphenylalanine
and H2O2
activity
EC, enzyme commission classification; MUB, methylumbelliferyl.
c. 1 g soil in 100 mL of 50 mM sodium acetate buffer;
alkaline soils were assayed at pH 8 using 50 mM sodium
bicarbonate buffer.
The database includes activities for the seven-most widely
measured soil enzymes from 40 ecosystems. The number of
cases per ecosystem (the number of locations sampled · the
number of sampling dates), ranges from 4 to 169, for a total
of 1154 cases (Table 3). Metadata for all sites are appended
as Supporting information.
Enzyme description
b-1,4-Glucosidase (BG) and cellobiohydrolase (CBH) are
enzymes that contribute to the degradation of cellulose and
other beta-1,4 glucans (Ljungdahl & Eriksson 1985). The
principal function of BG is hydrolysis of cellobiose to
glucose, but many of these enzymes are active against other
substrates as well. CBH hydrolyzes cellobiose dimers from
the non-reducing ends of cellulose molecules. b-N-acetylglucosaminidase (NAG) plays a role in the degradation of
chitin and other b-1,4-linked glucosamine polymers that are
analogous to the role of BG in cellulose degradation
(Sinsabaugh 2005). Leucine aminopeptidase (LAP) hydrolyzes leucine and other hydrophobic amino acids from the
N terminus of polypeptides. There are other classes of
aminopeptidases, but assays of environmental samples
generally show the greatest activities towards leucine- and
alanine-linked substrates, so LAP activity is broadly used as
an indicator of peptidase potential (Sinsabaugh & Foreman
2001; Stursova et al. 2006). Phosphatases (alkaline and acid,
AP) hydrolyze phosphomonoesters, and in some cases
phosphodiesters, releasing phosphate (Turner et al. 2002;
Toor et al. 2003). The degradation of polyphenols (e.g.
lignin, tannin and their degradation products) is an oxidative
process (Kirk & Farrell 1987). Two classes of enzymes have
a large role. Phenol oxidases (POX, e.g. laccases) have
Cu-containing prosthetic groups with redox potentials
sufficient to extract electrons from phenolic groups (Mayer
2008 Blackwell Publishing Ltd/CNRS
& Staples 2002). Peroxidases (PER, e.g. lignin peroxidase,
Mn peroxidase) have Fe-containing haeme prosthetic
groups that use H2O2 or secondary oxidants to degrade
aromatic compounds (Dorán & Esposito 2000; Hofrichter
2002).
Statistical analysis
Univariate and multivariate (enter-removal) linear regression
analyses were used to relate mean ecosystem EEA (Table 3)
to variation among ecosystems in mean annual temperature
(MAT), mean annual precipitation (MAP), soil pH and SOM
concentration (Table 2). A principal components analysis
that included data from 24 ecosystems was used to reduce
the seven enzyme variables to two factors. The remaining 16
sites had missing data for one or more enzyme activities.
Mean factor values with 95% confidence intervals were
calculated for each ecosystem to graphically display largescale patterns in the distribution of soil EEA. Ratios of
ln(BG) : ln(AP) and ln(BG) : ln(NAG + LAP) activities
were calculated for all cases. These indices, measures of
the enzymatic resources directed towards acquisition of
organic P and organic N relative to C, were used to test for
functional convergence in soil EEA distributions across
ecosystems and compare relative nutrient demand in
relation to climatic gradients.
RESULTS
The potential activities g)1 dry soil of four enzymes, BG,
CBH, NAG and AP, varied across ecosystems in relation to
SOM concentration (R2: 0.55, 0.42, 0.49 and 0.60 respectively; Fig. 1, Table 4). Five enzyme activities had significant
but weaker univariate relationships with bulk soil pH (R2:
CBH 0.12, NAG 0.31, LAP 0.28, AP 0.36, POX 0.17; Table 4).
Links to climate parameters were more tenuous: CBH and
NAG were correlated with MAT; BG, LAP and AP were
correlated with MAP (Table 4). Multiple regressions that
Abbreviation
Location
Cover ⁄ Biome
Soil
SOM (%)
pH
MAT (C)
MAP (mm)
Crested Butte, CO
Konza Prairie LTER, KS
Kruger National Park, SA
Ukulinga, SA
Niwot Ridge LTER, CO
Niwot Ridge LTER, CO
Duke Forest, NC
Oak Ridge National Lab, TN
Sevilleta LTER, NM
Sevilleta LTER, NM
Sevilleta LTER, NM
Manistee National Forest, MI
Manistee National Forest, MI
Manistee National Forest, MI
Delta Junction, AK
Delta Junction, AK
Delta Junction, AK
McMurdo Dry Valley, ANT
Arctic LTER, AK
Arctic LTER, AK
Cedar Creek, MN
Cedar Creek, MN
Cedar Creek, MN
Cedar Creek, MN
Cedar Creek, MN
UT Arboretum, OH
Fuller Preserve, OH
Harvard Forest, MA
Chicago Botanical Garden, IL
CB
KNZ
KRNP
UKL
NWT ⁄ S
NWT ⁄ P
DF
ORNL
SEV ⁄ G
SEV ⁄ C
SEV ⁄ J
MNF ⁄ O
MNF ⁄ MO
MNF ⁄ M
DJ ⁄ A
DJ ⁄ S
DJ ⁄ H
MCM
ARC ⁄ T
ARC ⁄ S
CDR ⁄ H
CDR ⁄ M
CDR ⁄ A
CDR ⁄ O
CDR ⁄ P
UTA
FP
HFR
CBG
N39 W107
N39 W97
S24 E32
S30 E29
N40 W105
N40 W105
N36 W79
N36 W84
N34 W107
N34 W107
N34 W107
N44 W85
N44 W85
N44 W85
N63 W145
N63 W145
N63 W145
S77 E163
N69 W149
N69 W149
N45 W93
N45 W93
N45 W93
N45 W93
N45 W93
N41 W83
N41 W8
N42 W71
N42 W88
Sagebrush shrubland
Tall grass prairie
Tall grass prairie
Tall grass prairie
Spruce ⁄ fir forest
Lodgepolepine forest
Loblolly pine forest
Sweetgum forest
Grama grassland
Creosote shrubland
Juniper shrubland
Black ⁄ White oak forest
Sugar maple ⁄ red oak forest
Sugar maple ⁄ basswood forest
Aspen forest
Black Spruce forest
Herbaceous sere
Cold desert
Tundra ⁄ tussock
Tundra ⁄ shrub
Forb ⁄ grass grassland
Sugar maple ⁄ basswood forest
Bigtooth aspen forest
Pin oak forest
White pine forest
Oak forest
Oak forest
Mixed deciduos forest
Maple forest
8.4
8.2
6.5
13.0
28.8
28.7
5.0
2.8
1.8
2.4
3.7
2.5
2.7
4.5
26.7
19.7
14.5
0.55
94
81
2.0
3.3
2.5
2.0
1.2
12.0
12.0
12.7
11.3
8.0
5.6
5.1
5.1
5.0
5.0
5.0
6.0
8.2
7.5
7.2
3.9
4.1
5.6
5.3
5.2
5.5
8.7
4.5
4.9
6.0
5.3
5.6
5.1
5.6
6.4
6.9
4.3
6.4
1.1
13.0
22.9
17.6
)3.7
)3.7
15.5
14.2
13.2
13.2
13.2
9.7
9.7
9.7
)1.9
)1.9
)1.9
)22.4
)9
)9
6.7
6.7
6.7
6.7
6.7
10
10
7.6
9.3
650
835
550
694
930
930
1140
1390
250
250
250
890
890
890
311
311
311
100
330
330
801
801
801
801
801
856
856
1100
935
Barro Colorado Monument, Panama
Luquillo LTER, PR
Luquillo LTER, PR
Luquillo LTER, PR
Luquillo LTER, PR
CAP LTER, AZ
CAP LTER. AZ
Kitty Todd, OH
Southview savannah, OH
Secor Metropark, OH
Ohio University, OH
BCNM
LUQ ⁄ M
LUQ ⁄ P
LUQ ⁄ C
LUQ ⁄ LM
CAP ⁄ D
CAP ⁄ U
KT
SS
SM
OU
N9 W80
N18 W66
N18 W66
N18 W66
N18 W66
N33 W112
N33 W112
N41 W83
N41 W83
N41 W83
N39 W82
Lowland tropical forest
Montane tropical forest
Palm forest
Cloud forest
Lower montane forest
Sonoran desert
Urban Sonoran desert
Mesic tallgrass prairie
Mesic tallgrass prairie
Oak ⁄ maple forest
Oak ⁄ maple ⁄ ash forest
Alfisol
Udic arguistoll
Alfisol
Plinthic paleustalf
Inceptisol
Inceptisol
Acidic hapludult
Aquic hapludult
Thermic halpocalcid
Thermic halpocalcid
Mesic halpocalcid
Entic halporthod
Typic halporthod
Typic halporthod
Pergelic cryaquepts
Pergelic cryaquepts
Pergelic cryaquepts
Anhyorthels ⁄ Anhyoturbels
Typic aquaturbel
Aquic umborthel
Udipsamments
Udipsamments
Udipsamments
Udipsamments
Udipsamments
Aeric haplaquept
Typic argiaquoll
Typic Dystrocrept
Oxyaquic Hapludalf ⁄
Aeric Epiaqualf
Oxisol
Aquic tropohumults
Aquic tropohumults
Aquic tropohumults
Aquic tropohumults
Aridisol
Aridisol
Typic Haplaquolls
Typic Udipsamments
Typic Haplaquolls
Hapludalfs
9.4
10.5
23.6
25.9
14.7
2.2
3.1
10.4
3.3
7.4
9.8
5.5
5.0
4.9
4.9
5.0
7.7
7.6
7.2
6.4
6.6
5.9
27
19.6
19.0
18.9
21.0
17
17
10
10
10
10
2600
3137
4172
3237
3500
250
250
900
900
900
900
SOM, soil organic matter; MAT, mean annual temperature; MAP, mean annual precipitation.
Stoichiometry of soil enzyme activity 1255
2008 Blackwell Publishing Ltd/CNRS
Site
Review and Synthesis
Table 2 Study locations and ecosystem characteristics
1256 R. L. Sinsabaugh et al.
Review and Synthesis
Table 3 Potential soil EEA across ecosystems shown as mean values (nmol h)1 g SOM)1) with coefficients of variation
Site
n
BG
CB
KNZ
KRNP
UKL
NWR ⁄ S
NWR ⁄ P
DF
ORNL
SNWR ⁄ G
SNWR ⁄ C
SNWR ⁄ J
MNF ⁄ O
MNF ⁄ MO
MNF ⁄ M
DJ ⁄ A
DJ ⁄ S
DJ ⁄ H
MCM
ARC ⁄ T
ARC ⁄ S
CDCR ⁄ H
CDCR ⁄ M
CDCR ⁄ A
CDCR ⁄ O
CDCR ⁄ P
UTA
FP
HF
CBG
BCNM
LUQ ⁄ M
LUQ ⁄ P
LUQ ⁄ C
LUQ ⁄ LM
CAP ⁄ D
CAP ⁄ U
OH ⁄ KT
OH ⁄ SS
OH ⁄ SM
OH ⁄ OU
GLOBAL
45
24
12
12
169
53
45
18
87
27
27
39
39
39
4
4
4
44
40
40
36
18
18
36
36
40
30
12
24
8
3
3
3
3
10
10
24
12
48
10
1154
1850
3320
2670
2650
4290
3790
3450
4490
2740
2280
1820
1480
2310
3690
3160
3360
4850
119
3940
1940
6810
4640
5840
7080
9200
4240
5940
NA
4450
1920
367
355
176
986
1080
1180
1160
981
1410
4560
3320
CBH
(33)
(18)
(16)
(24)
(116)
(115)
(54)
(24)
(109)
(172)
(50)
(67)
(46)
(41)
(70)
(37)
(18)
(139)
(93)
(33)
(49)
(31)
(39)
(48)
(67)
(40)
(20)
(53)
(33)
(27)
(29)
(11)
(14)
(50)
(33)
(92)
(37)
(63)
(41)
(70)
NA
1010
525
794
2290
2120
757
1040
438
395
278
450
641
1050
NA
NA
NA
NA
2090
881
1080
1070
1190
1560
1960
1510
2700
NA
1540
512
41
35
33
164
67
77
214
1480
337
1710
942
(18)
(18)
(47)
(149)
(105)
(53)
(34)
(104)
(192)
(64)
(51)
(37)
(40)
(74)
(60)
(106)
(41)
(59)
(51)
(92)
(57)
(24)
(49)
(46)
(53)
(8)
(14)
(26)
(94)
(48)
(97)
(63)
(91)
(58)
(78)
NAG
LAP
377
2530
1210
2750
3190
3330
3340
2100
114
200
145
1450
1110
1450
2750
2760
1570
NA
2080
1670
2920
1870
2680
3210
3090
2340
2490
NA
2080
1560
189
167
108
433
42
42
705
4820
845
2320
1740
763
205
62
72
125
115
121
187
5730
7590
4380
131
192
396
47
34
31
3920
637
340
NA
NA
NA
NA
NA
2490
3930
NA
2010
158
42
25
11
79
5770
7360
652
777
336
666
1450
(36)
(25)
(18)
(31)
(100)
(127)
(46)
(23)
(81)
(187)
(47)
(58)
(73)
(90)
(68)
(59)
(43)
(66)
(56)
(66)
(31)
(24)
(50)
(60)
(57)
(28)
(39)
(40)
(36)
(33)
(44)
(42)
(53)
(46)
(104)
(50)
(91)
(25)
(70)
AP
(94)
(32)
(20)
(40)
(180)
(135)
(70)
(44)
(44)
(135)
(56)
(69)
(47)
(29)
(57)
(76)
(163)
(88)
(108)
(56)
(77)
(38)
(66)
(108)
(20)
(20)
(30)
(28)
(55)
(44)
(85)
(69)
(183)
(52)
(156)
988
6180
4200
3700
5440
5270
9460
9130
2490
2140
2670
2440
4070
4110
2550
3850
2820
3070
NA
NA
9820
5870
8250
13 000
14 200
5960
5400
NA
5120
11 500
6132
1210
3400
4720
983
1000
2100
15 800
1850
5200
5300
POX
(74)
(12)
(18)
(33)
(107)
(120)
(77)
(27)
(47)
(184)
(39)
(45)
(27)
(29)
(33)
(30)
(20)
(100)
(75)
(31)
(28)
(67)
(80)
(39)
(40)
(48)
(27)
(3)
(38)
(25)
(20)
(43)
(34)
(91)
(29)
(61)
(21)
(71)
414 000
3880
2220
11 700
13 900
6150
12 800
17 500
1 016 000
383 000
299 000
1110
386
40
ND
37 700
ND
210 000
NA
NA
424
1370
4780
6020
2880
54 500
48 600
9700
8230
ND
24 000
5400
1775
17 100
8140
8910
7
33 200
16 500
1400
70 600
PER
(50)
(77)
(144)
(162)
(170)
(188)
(136)
(69)
(109)
(178)
(70)
(207)
(305)
(323)
(129)
(89)
(299)
(260)
(184)
(184)
(285)
(81)
(89)
(57)
(275)
(87)
(93)
(90)
(75)
(129)
(147)
(187)
(137)
(157)
(316)
(266)
NA
3120
209
1500
1540
3750
163 000
412 000
3 056 000
842 000
807 000
31 000
33 300
9570
11 500
6830
ND
217 000
NA
NA
93 400
54 100
69 800
96 700
148 000
36 000
69 700
50 400
34 200
5200
44 800
60 600
29 400
65 000
71 800
34 100
12
5400
10 600
15 700
178 000
(149)
(346)
(168)
(222)
(208)
(101)
(64)
(119)
(82)
(57)
(159)
(147)
(192)
(120)
(200)
(107)
(61)
(41)
(30)
(53)
(36)
(96)
(58)
(65)
(81)
(55)
(32)
(50)
(78)
(43)
(35)
(51)
(233)
(346)
(153)
(142)
(293)
n, number of cases (number of experimental units sampled · number of sampling dates); NA, not assayed; ND, not detected. Enzyme
abbreviations given in Table 1.
included edaphic and climatic variables accounted for 50–
70% of the variation in activity among ecosystems, except
for PER (22%). Within these regression models, soil pH was
a significant variable for all enzymes except CBH.
Extracellular enzyme activity potentials are also commonly presented as specific activities (i.e. activity g)1 SOM)
to analyse and compare the dynamics of decomposition
(Table 3). Because of their strong covariance with SOM, the
mean-specific activities of BG, CBH, NAG and AP varied
2008 Blackwell Publishing Ltd/CNRS
by less than an order of magnitude across ecosystems and
showed similar coefficients of variation (CV, 70–78%, Table
3). Specific LAP, POX and PER activities, which showed
stronger relationships with soil pH (Fig. 2), varied more
widely across ecosystems with CVs of 156%, 266% and
293%, respectively (Table 3). On average, spatiotemporal
variation in specific EEA within ecosystems was lower than
the variation among ecosystems (mean within ecosystem
CV: BG 50%, CBH 64%, AP 49%, NAG 57%, LAP 71%,
Review and Synthesis
Stoichiometry of soil enzyme activity 1257
Figure 1 Natural logarithm of mean extracellular enzyme activity g)1 dry soil by site in relation to natural logarithm of soil organic matter
concentration (%). Linear regressions are shown for the four enzymes with statistically significant relationships (P < 0.05). R2 values for BG,
CBH, AP and NAG are 0.55, 0.42, 0.60 and 0.49 respectively. Slopes are 0.98, 0.96, 0.80 and 1.13 respectively. Enzyme abbreviations given in
Table 1.
2008 Blackwell Publishing Ltd/CNRS
1258 R. L. Sinsabaugh et al.
Review and Synthesis
Table 4 Regression statistics relating ln(EEA g)1 soil dry mass) to
climatic and edaphic variables
BG
CBH
NAG
LAP
AP
POX
PER
SOM
MAT
MAP
pH
Multiple
0.55*
0.42*
0.49
–*
0.60*
–*
–
–
0.46*
0.31*
–*
–
–
–
0.22
–
–
0.20*
0.18
–
–*
–*
0.12
0.31*
0.28*
0.36*
0.17*
–*
0.56
0.56
0.57
0.70
0.63
0.50
0.22
Values are R2 statistics for significant (P < 0.05) linear regressions.
Multiple is R2 statistics for multiple linear regressions (stepwise
removal) of ln(EEA g)1 DM) as f(SOM, MAT, MAP, pH).
Abbreviations and units given in Tables 1 and 2. POX regressions
exclude five sites with anomalous undetectable values; PER
regressions exclude two sites with anomalous undetectable values
(Table 3).
*Variables that make significant (t-test, P < 0.05) contributions to
the multiple linear regressions.
POX 158%, PER 116%). However, within ecosystems, the
CV for hydrolytic activities covaried with the number of
observations (R2: BG 0.29, CBH 0.29, AP 0.23, NAG 0.17,
LAP 0.23, P < 0.05), so the full magnitude of spatiotemporal variation within many of the ecosystems represented
may be underestimated. Variation in oxidative activities,
though greater than that of hydrolytic activity, was not
correlated with sampling effort (R2: POX 0.05, PER 0.006,
P > 0.05).
The specific activities of all seven enzymes had statistically significant relationships with soil pH within multiple
linear regression models, and all but BG and CBH also
showed significant univariate regressions with pH (Fig. 2,
Table 5). Relationships with climate variables were weaker:
only three specific activities (BG CBH, LAP) had significant
relationships with MAP; two (CBH, NAG) had significant
relationships with MAT (Table 5). Multiple regression
models that included the two climatic (MAP and MAT)
and soil pH captured 17% (AP) to 70% (LAP) of between
ecosystem variances in EEA (Table 5).
Principal components analysis (PCA) of data from 24
ecosystems reduced the seven enzyme variables to two
factors that captured 80% of the variation. Ordination of
ecosystems by these factors showed two discrete distributions (Fig. 3). Arid and semiarid sites, which generally have
low SOM and alkaline soil pH, varied primarily in relation to
factor 2 (32% of variance, positively correlated with LAP,
POX and PER). Wetter ecosystems, which generally
have acidic soil pH, varied principally along factor 1 (46%
of variance, positively correlated with BG, CBH, NAG
and AP). No sites showed high activity for both sets of
variables.
2008 Blackwell Publishing Ltd/CNRS
Estimates of C : N : P composition for soil and soil
microbial biomass converge on 186 : 13 : 1 and 60 : 7 : 1
respectively (Cleveland & Liptzin 2007). However, nutrient
acquisition effort, as indicated by the potential activities of
the hydrolytic enzymes that generate readily consumed
products from the largest soil pools of organic C, N, and P
(i.e. cellulose, protein, chitin, peptidoglycan and sugar
phosphates), may be more equitably distributed. The ratio
ln(BG) : ln(NAG + LAP), an indicator of potential C : N
acquisition activity averaged 1.02 ± 0.20 (SD); the corresponding C : P ratio, represented by the ratio of
ln(BG) : ln(AP) activity, was 0.95 ± 0.15 (Fig. 4). By these
indicators, the ratio of C : N : P acquisition activity is
c. 1 : 1 : 1. Although lignin, tannin and other aromatic
components of plant and microbial biomass are mineralized
within the soil profile, they are not primary carbon sources
for any major group of soil microorganisms, so POX and
PER activities are not included in this acquisition ratio.
At the ecosystem scale, enzymatic indicators of relative
nutrient availability showed patterns in relation to climatic
gradients. The mean enzymatic C : P acquisition ratio for
ecosystems declined in relation to both MAT (R2 = 0.33)
and MAP (R2 = 0.71), suggesting that P availability declines
relative to C as soil-weathering intensity increases (Fig. 5).
Using a multiple linear regression [enzymatic C : P
ratio = f(MAT, MAP)], the C : P acquisition ratio is
predicted to decrease from 1.1 to 0.7 across latitudinal
gradients in weathering intensity (R2 = 0.74, F = 47, MAT
coefficient: )0.00239, MAP coefficient: )0.0000704, intercept: 1.044) The mean C : N acquisition ratio for ecosystems was not related to MAT, but did show a weak positive
relationship with MAP (R2 = 0.16, Fig. 5). Because the
C : P and C : N acquisition ratios had opposing trends in
relation to MAP, the N : P acquisition ratio was negatively
related to MAP (R2 = 0.58, Fig. 5).
DISCUSSION
The description of soil EEA on a global scale provides a
frame of reference for comparing ecosystems and an
opportunity to relate the soil microbial community function
to global patterns of microbial biomass composition,
nutrient dynamics and SOM storage. Our analysis documents that the most commonly measured extracellular
enzyme activities show different ranges of variation and
different distributions in relation to ecosystem variables, yet
converge on a common pattern linked to the stoichiometry
of microbial growth.
For BG, CBH and AP, activity g)1 dry soil tracked SOM
content. LAP, POX and PER activities varied widely but
generally increased with soil pH, while NAG activity was
strongly related to both SOM (positively) and soil pH
(negatively). When specific activities (i.e. activity g)1 SOM)
Review and Synthesis
Stoichiometry of soil enzyme activity 1259
Figure 2 Natural logarithm of mean extracellular enzyme activity g)1 soil organic matter by site in relation to soil pH. Linear regressions are
shown for the five enzymes with statistically significant relationships (P < 0.05). R2 values for POX, PER, NAG, LAP and AP are 0.21, 0.10,
0.23, 0.62 and 0.16 respectively. Regression slopes are: POX 0.91, PER 0.63, NAG )0.54, LAP 1.25 and AP )0.25. Enzyme abbreviations
given in Table 1.
are compared, all enzymes show a statistically significant
relationship to soil pH in either univariate or multivariate
models with weak negative trends for BG, CBH and AP, a
strong negative trend for NAG and strong positive trends
for LAP, POX and PER. Whether EEA is expressed g)1 of
soil or g)1 SOM, soil pH emerges as the variable most
2008 Blackwell Publishing Ltd/CNRS
1260 R. L. Sinsabaugh et al.
Review and Synthesis
Table 5 Regression statistics relating ln(EEA g)1 SOM) to climatic
and edaphic variables
BG
CBH
NAG
LAP
AP
POX
PER
MAT
MAP
pH
Multiple
–
0.39*
0.21*
–
–
–
–
0.19*
0.27*
–
0.30*
–
–
–
–*
–*
0.23*
0.62*
0.16*
0.21*
0.10*
0.40
0.53
0.50
0.70
0.17
0.43
0.25
Values are R2 statistics for significant (P < 0.05) linear regressions.
Multiple is R2 statistics for multiple linear regressions (stepwise
removal) of ln(EEA g)1 SOM) as f(MAT, MAP, pH). Abbreviations and units given in Tables 1 and 2. POX regressions exclude
five sites with anomalous undetectable values; PER regressions
exclude two sites with anomalous undetectable values (Table 3).
*Variables that make significant (t-test, P < 0.05) contributions to
the multiple linear regressions.
Figure 3 Ordination of 24 ecosystems based on potential soil
extracellular enzyme activity g)1 organic matter using principal
components analysis (varimax rotation). Factor 1 (46% of variance)
is correlated with BG (r = 0.89), CBH (0.84), NAG (0.92) and AP
(0.84). Factor 2 (31% of variance) is correlated with LAP (0.85),
POX (0.83) and PER (0.74). The vertical grouping represents arid
and semiarid ecosystems with soil pH > 7. The horizontal
grouping represent ecosystems with relatively high precipitation
and soil pH < 7. Values shown are means with 95% confidence
intervals. Enzyme abbreviations given in Table 1.
closely linked to ecosystem variation (Tables 4 and 5). These
patterns resemble recent findings that microbial diversity in
soil and other systems also follow pH gradients (Baath &
Anderson 2003; Fierer & Jackson 2006; Singh et al. 2006;
Cookson et al. 2007).
2008 Blackwell Publishing Ltd/CNRS
Figure 4 Ratio of ln(BG) : ln(NAG + LAP), an indicator of
potential C : N acquisition activity, in relation to the ratio
ln(BG) : ln(AP), an indicator of potential C : P acquisition activity.
The centroid is 0.95 ± 0.15 (SD) for C : P and 1.02 ± 0.20 for
C : N values > 1.2 for either ratio constrain values of the
complementary ratio. The regression C : N = 0.75 (C : P) + 0.31
has an R2 value of 0.28, n = 929.
The association of pH and EEA reflects interactions at
multiple scales of organization. Soil pH has direct biochemical effects on the activity of extracellular enzymes immobilized in the soil matrix. Glycosidases have pH optima
c. 5 ± 1. POX, lignin peroxidases and most proteases
(metallo-proteases, serine proteases) have optima of 8 ± 1.
Extracellular phosphatases are produced in acid and alkaline
active forms by various taxa. At the ecosystem scale, soil pH
reflects climatic controls on soil weathering and plant
community composition, which may affect the large-scale
distribution of EEA through changes in nutrient availability
and SOM composition, as well as microbial community
composition.
These interactions over multiple levels of organization
generate global patterns that are not observed at the
ecosystem scale. The most conspicuous of these is the
distribution of oxidative activity. Basidiomycetes produce a
variety of extracellular oxidative enzymes and are generally
considered to be the most efficient degraders of lignin
(Rabinovich et al. 2004; Baldrian 2006). These organisms are
most abundant in mid- to high-latitude forests where the
dominant plants have high lignin concentrations and the soil
is acidic. Within these ecosystems, POX and PER activities
tend to increase with secondary succession (Sinsabaugh et al.
2005). This trend is evident for the MNF and DJ ecosystems
(Table 3). But at the global scale, this biome-specific trend is
overwhelmed by the inclusion of arid alkaline soils, which
have near optimal pH for POX and PER activities and
edaphic conditions that may promote enzyme stability
(Stursova & Sinsabaugh 2008), even though basidiomycetes
are relatively uncommon (Porras-Alfaro et al. 2008).
Review and Synthesis
Stoichiometry of soil enzyme activity 1261
Figure 5 Mean ecosystem ratios of C : P, C : N and N : P acquisition activity, as indicated by ratios of ln(BG) : ln(AP),
ln(BG) : ln(LAP + NAG) and ln(LAP + NAG) : ln(AP) respectively, in relation to mean annual temperature and mean annual
precipitation. Data from the McMurdo Dry Valleys are excluded from the C : P and C : N graphs because BG activities are extremely
low. Enzyme abbreviations are listed in Table 1. Regression statistics for C : P vs. MAT: n = 36, R2 = 0.33, F = 16.7, P < 0.001,
a = )0.0070; for C : P vs. MAP: n = 36, R2 = 0.71, F = 84.2, P < 0.001, a = )0.000080; for C : N vs. MAP: n = 38, R2 = 0.16, F = 6.61,
P = 0.014, a = 0.000035; for N : P vs. MAP: n = 37, R2 = 0.58, F = 47.5, P < 0.001, a = )0.00011. The regressions for C : N and N : P
vs. MAT were not statistically significant (P > 0.1).
2008 Blackwell Publishing Ltd/CNRS
1262 R. L. Sinsabaugh et al.
The oxidative degradation of lignin, tannin and other
aromatic components of plant litter is generally considered
the rate-limiting step in decomposition (Meentemeyer 1978;
Fog 1988). Freeman et al. (2001), for example, proposed that
POX activity was the proximate control on organic matter
mineralization, and thereby CO2 efflux, in high-latitude
peats (histosols), and that regional climate warming could
release constraints imposed by low oxygen availability on
the activity of these immobilized enzymes, leading to net
losses of SOM. Our EEA analyses suggest a broader context
for POX and PER in SOM storage. Despite low rates of
primary production, SOM content is greatest in highlatitude ecosystems where POX and PER activities in soil
are physicochemically constrained by low pH, low temperature and low oxygen availability caused by soil flooding.
SOM contents are lowest in arid ecosystems, which also
have low rates of primary production, where alkaline pH
increases the solubility of polyphenols and optimizes POX
and PER activities (Collins et al. 2008).
Another global pattern in the distribution of EEA is
the convergence of C : N : P acquisition potentials, as
measured by ln(BG) : ln(LAP + NAG) : ln(AP) activities
(Fig. 3). Across ecosystems, BG activity was most strongly
correlated with the abundance of SOM. Despite its low pH
optimum, specific BG activity varied only weakly with soil
pH, presumably because cellulose and other b-1,4-glucan
polymers dominate the organic matter inputs of vegetated
ecosystems. Declines in specific activity as a result of
higher soil pH are counteracted by increased enzyme
expression. The role of plant litter in controlling BG
activity is suggested by data from the McMurdo Dry
Valleys of Antarctica where there are no plants, soil pH is
high and the specific activity of BG is only 3% of the
global average (Table 3). As indicators of organic N
acquisition from amino acids and amino sugars, LAP and
NAG showed similar ranges of activity but inverse
relationships to soil pH (Fig. 2). As a result, the sum of
LAP + NAG was similar across ecosystems. AP activity,
like BG, varied across ecosystems largely in relation to
SOM abundance. Soil pH had little effect on specific AP
activity, presumably because both acid and alkaline active
enzymes are produced. Because of these trends, specific C,
N and P acquisition potentials generally showed a
consistent stoichiometry across ecosystems, even though
the component activities had different relationships with
environmental variables.
The consistency of stoichiometric relationships across
ecosystems is unexpected because experimental manipulations within ecosystems show that C, N and P acquisition
activities can be modulated by inorganic nutrient availability
(Olander & Vitousek 2000; Sinsabaugh et al. 2002; Stursova
et al. 2006), following resource allocation models based on
the premise that cellular resources directed towards N and P
2008 Blackwell Publishing Ltd/CNRS
Review and Synthesis
acquisition reduce resources available for C acquisition
(Sinsabaugh & Moorhead 1994; Allison et al. 2007). The
convergence of the C : N : P acquisition ratio on a global
scale shows that the plasticity of these relationships is
constrained. The C : N and C : P acquisition ratios increase
colinearly to a maximum value of 1.2 (Fig. 4). Values > 1.2
for either ratio occur only when the other ratio remains
< 1.2 and such instances occurred in < 3% of the cases in
our dataset. Thus, the C : N : P acquisition ratio appears to
be an integral feature of soil microbial community function,
linking environmental nutrient availability to the C : N : P
stoichiometry of microbial biomass (Cleveland & Liptzin
2007).
Although nutrient acquisition ratios are constrained by
stoichiometry, variance at the ecosystem scale follows largescale biogeochemical patterns. Biogeochemical theory predicts that soil N availability should be highest in tropical
ecosystems, while P availability should be greatest in mid- to
high-latitude ecosystems (Walker & Syers 1976; Martinelli
et al. 1999). P is a rock-derived nutrient that may be lost due
to leaching or occlusion in mineral particles in highly
weathered soils. N, an atmospherically derived nutrient,
tends to be scarce in areas that have experienced recent
glaciation. These large-scale trends are apparent in the
elemental C : N : P ratios of plants (McGroddy et al. 2004;
Reich & Oleksyn 2004). Our analyses show that they are
also reflected in the enzymatic ratios of C : N : P acquisition by soil microbial communities. While individual enzyme
activities were not strongly linked to climatic variables, mean
ecosystem C : P acquisition ratios declined as MAT and
MAP increased, indicating that soil microbial communities
direct more effort to acquiring and cycling P relative to
processing C in more weathered soils (Fig. 5). The C : N
acquisition ratio was much less responsive to climatic
gradients. However, the trend towards greater ratios,
indicative of higher relative N availability, with increasing
MAP is consistent with biogeochemical predictions.
The contrast between the robust C : P acquisition
relationship with climate measures and the weak C : N
acquisition relationship extends patterns observed at the
ecosystem scale. In both aquatic and terrestrial ecosystems,
an inverse relationship between extracellular phosphatase
activity and relative P availability is a general phenomenon,
reflecting the role of P in energy metabolism. Because most
extracellular phosphatases will hydrolyze phosphate from a
wide range of substrates, it is relatively easy to measure this
potential with a single assay.
N acquisition from organic matter is more complex than
P acquisition. N is distributed among several classes of
polymers as well as humic molecules, so N acquisition
strategies are linked to the C-substrate preferences of
particular taxa (McGill & Cole 1981; Manzoni et al. 2008). In
the context of decomposition models, three broad strategies
Review and Synthesis
can be defined, each assigned to a guild of organisms:
opportunists consume labile proteins, decomposers need
external N inputs to decompose lignocellulose and miners
use oxidative enzymes to breakdown humus for C and N
(Moorhead & Sinsabaugh 2006). Given the diversity of N
acquisition strategies and their conflation with carbon
acquisition, it is not surprising that studies that compare
soil EEA responses to experimental N amendment produce
mixed results. In some ecosystems, POX and PER (e.g. Frey
et al. 2004; Sinsabaugh et al. 2005), LAP (e.g. Stursova et al.
2006) or NAG activities (e.g. Olander & Vitousek 2000;
DeForest et al. 2004) decrease with N amendment, but
others studies find no response (e.g. Zeglin et al. 2007). As a
result, large-scale relationships between particular enzyme
activities and measures of N availability are likely to be
weaker than relationships between P availability and
phosphatase activity.
Our analyses indicate that the enzymatic potential for
hydrolyzing the labile components of SOM is tied to
substrate availability, soil pH and the stoichiometry of
microbial nutrient demand. The enzymatic potential for
oxidizing the recalcitrant fractions of soil organic material,
which is a proximate control on SOM accumulation, is most
strongly related to soil pH. These trends provide insight into
the biogeochemical processes that create global patterns in
ecological stoichiometry and organic matter storage.
ACKNOWLEDGEMENTS
This paper is the product of a workshop funded by the
National Science Foundation Long Term Ecological
Research Network Office.
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Manuscript received 8 May 2008
First decision made 10 June 2008
Second decision made 7 August 2008
Manuscript accepted 19 August 2008