(Q91866642)

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Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology

scientific article published on 14 June 2019

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

1 reference

Europe PubMed Central

Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Alejandra Loyola

3

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Alejandra Loyola

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

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Rodrigo Flores-Ríos

1

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Europe PubMed Central

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25 April 2020

Raquel Quatrini

2

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Europe PubMed Central

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25 April 2020

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14 June 2019

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Europe PubMed Central

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25 April 2020

Computational and Structural Biotechnology Journal

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25 April 2020

17

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Europe PubMed Central

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25 April 2020

746-756

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Growth Phase-Dependent Chromosome Condensation and Heat-Stable Nucleoid-Structuring Protein Redistribution in Escherichia coli under Osmotic Stress

1 reference

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The Type IV Secretion System of ICE1: Formation of a Conjugative Pilus in

1 reference

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Regulatory Hierarchies Controlling Virulence Gene Expression in and

1 reference

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ICEberg 2.0: an updated database of bacterial integrative and conjugative elements

1 reference

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Post-translational modification of nucleoid-associated proteins: an extra layer of functional modulation in bacteria?

1 reference

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Impact of Chromosomal Architecture on the Function and Evolution of Bacterial Genomes

1 reference

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23 February 2021

Differential protein-protein binding affinities of H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and IncP-7 plasmid pCAR1

1 reference

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23 February 2021

Modulation of H-NS transcriptional silencing by magnesium.

1 reference

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Proteome and acylome analyses of the functional interaction network between the carbazole-degradative plasmid pCAR1 and host Pseudomonas putida KT2440.

1 reference

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23 February 2021

Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins.

1 reference

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A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species

1 reference

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A novel nucleoid-associated protein coordinates chromosome replication and chromosome partition

1 reference

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23 February 2021

Growth phase-dependent expression profiles of three vital H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and on the pCAR1 plasmid

1 reference

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Bacterial-Chromatin Structural Proteins Regulate the Bimodal Expression of the Locus of Enterocyte Effacement (LEE) Pathogenicity Island in Enteropathogenic Escherichia coli.

1 reference

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23 February 2021

The interplay between DNA topology and accessory factors in site-specific recombination in bacteria and their bacteriophages.

1 reference

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Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae

1 reference

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The behavior of mobile genetic elements (MGEs) in different environments

1 reference

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23 February 2021

Structure and function of bacterial H-NS protein.

1 reference

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23 February 2021

Genetic and biochemical interactions between the bacterial replication initiator DnaA and the nucleoid-associated protein Rok in Bacillus subtilis.

1 reference

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23 February 2021

Silencing of cryptic prophages in Corynebacterium glutamicum

1 reference

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23 February 2021

HU multimerization shift controls nucleoid compaction

1 reference

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Xenogeneic Silencing and Its Impact on Bacterial Genomes

1 reference

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23 February 2021

MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently

1 reference

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23 February 2021

Bacterial chromosome organization and segregation

1 reference

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23 February 2021

Distribution of putative xenogeneic silencers in prokaryote genomes

1 reference

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23 February 2021

Horizontal gene transfer: building the web of life.

1 reference

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23 February 2021

Transposable Phage Mu

1 reference

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23 February 2021

A Novel AT-Rich DNA Recognition Mechanism for Bacterial Xenogeneic Silencer MvaT

1 reference

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23 February 2021

Nucleoid-associated proteins encoded on plasmids: Occurrence and mode of function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Effects of three different nucleoid-associated proteins encoded on IncP-7 plasmid pCAR1 on host Pseudomonas putida KT2440.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The Bacteroides thetaiotaomicron protein Bacteroides host factor A participates in integration of the integrative conjugative element CTnDOT into the chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Integrated circuits: how transcriptional silencing and counter-silencing facilitate bacterial evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Timely binding of IHF and Fis to DARS2 regulates ATP-DnaA production and replication initiation.

1 reference

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23 February 2021

Nucleoprotein architectures regulating the directionality of viral integration and excision

1 reference

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23 February 2021

H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Modulation of primary cell function of host Pseudomonas bacteria by the conjugative plasmid pCAR1.

1 reference

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23 February 2021

H-NST induces LEE expression and the formation of attaching and effacing lesions in enterohemorrhagic Escherichia coli.

1 reference

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23 February 2021

Bacterial virulence and Fis: adapting regulatory networks to the host environment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Transposable prophage Mu is organized as a stable chromosomal domain of E. coli.

1 reference

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23 February 2021

High-resolution mapping of the spatial organization of a bacterial chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Characterization of the nucleoid-associated protein YejK.

1 reference

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23 February 2021

Single-molecule unzipping force analysis of HU-DNA complexes

1 reference

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23 February 2021

Genome-wide analysis of the salmonella Fis regulon and its regulatory mechanism on pathogenicity islands

1 reference

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23 February 2021

Genome architecture and global gene regulation in bacteria: making progress towards a unified model?

1 reference

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23 February 2021

Role of plasmid- and chromosomally encoded Hha proteins in modulation of gene expression in E. coli O157:H7.

1 reference

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23 February 2021

Complete genome sequence of temperate bacteriophage AcaML1 from the extreme acidophile Acidithiobacillus caldus ATCC 51756

1 reference

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23 February 2021

EbfC (YbaB) is a new type of bacterial nucleoid-associated protein and a global regulator of gene expression in the Lyme disease spirochete

1 reference

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A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2

1 reference

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Genetic and biochemical characteristics of the histone-like protein DR0199 in Deinococcus radiodurans

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23 February 2021

Structural and molecular genetic analyses of the bacterial carbazole degradation system.

1 reference

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Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

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23 February 2021

Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12.

1 reference

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1 reference

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Trends and barriers to lateral gene transfer in prokaryotes

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23 February 2021

Regulation of the integrase and cassette promoters of the class 1 integron by nucleoid-associated proteins.

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Regulation of transcription by DNA supercoiling in Mycoplasma genitalium: global control in the smallest known self-replicating genome

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Proteomic Analyses of Nucleoid-Associated Proteins in Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilis, and Staphylococcus aureus

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23 February 2021

Distribution of genes encoding nucleoid-associated protein homologs in plasmids

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23 February 2021

Differential functional properties of chromosomal- and plasmid-encoded H-NS proteins

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Pervasive regulation of nucleoid structure and function by nucleoid-associated proteins.

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23 February 2021

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

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23 February 2021

The transcriptional regulator Rok binds A+T-rich DNA and is involved in repression of a mobile genetic element in Bacillus subtilis.

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23 February 2021

Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression

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23 February 2021

Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function

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23 February 2021

Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.

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23 February 2021

Functional evolution of bacterial histone-like HU proteins.

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23 February 2021

Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism

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23 February 2021

The shape of the DNA minor groove directs binding by the DNA-bending protein Fis

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23 February 2021

The Pseudomonas aeruginosa pathogenicity island PAPI-1 is transferred via a novel type IV pilus

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23 February 2021

A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes.

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23 February 2021

Bacterial nucleoid-associated proteins, nucleoid structure and gene expression

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23 February 2021

Coordination of genomic structure and transcription by the main bacterial nucleoid-associated protein HU.

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23 February 2021

Differential effects and interactions of endogenous and horizontally acquired H-NS-like proteins in pathogenic Escherichia coli

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23 February 2021

Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1.

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23 February 2021

DNA relaxation-dependent phase biasing of the fim genetic switch in Escherichia coli depends on the interplay of H-NS, IHF and LRP.

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23 February 2021

H-NS binds with high affinity to the Tn10 transpososome and promotes transpososome stabilization

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23 February 2021

Differential regulation of horizontally acquired and core genome genes by the bacterial modulator H-NS.

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23 February 2021

Nucleoid-associated proteins and bacterial physiology.

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23 February 2021

Borrelia burgdorferi EbfC defines a newly-identified, widespread family of bacterial DNA-binding proteins.

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23 February 2021

DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes

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23 February 2021

Genomic islands: tools of bacterial horizontal gene transfer and evolution

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23 February 2021

The global bacterial regulator H-NS promotes transpososome formation and transposition in the Tn5 system

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23 February 2021

H-NS family members function coordinately in an opportunistic pathogen

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23 February 2021

Lsr2 of Mycobacterium represents a novel class of H-NS-like proteins

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23 February 2021

Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Selective repression by Fis and H-NS at the Escherichia coli dps promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Fine-tuned growth phase control of dps, encoding a DNA protection protein, by FIS and H-NS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The nucleoid binding protein H-NS acts as an anti-channeling factor to favor intermolecular Tn10 transposition and dissemination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Escherichia coli DnaA interacts with HU in initiation at the E. coli replication origin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Sequence characterization and comparative analysis of three plasmids isolated from environmental Vibrio spp.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Alternate SlyA and H-NS nucleoprotein complexes control hlyE expression in Escherichia coli K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Repression of intracellular virulence factors in Salmonella by the Hha and YdgT nucleoid-associated proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Differential regulation of Escherichia coli topoisomerase I by Fis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

An H-NS-like stealth protein aids horizontal DNA transmission in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

H-NS, the genome sentinel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The novel Hha/YmoA family of nucleoid-associated proteins: use of structural mimicry to modulate the activity of the H-NS family of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Transpososome dynamics and regulation in Tn10 transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

IHF-dependent activation of P1 plasmid origin by dnaA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Viewing single lambda site-specific recombination events from start to finish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

H-NS mediates the silencing of laterally acquired genes in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Requirement for Vibrio cholerae integration host factor in conjugative DNA transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Role of histone-like proteins H-NS and StpA in expression of virulence determinants of uropathogenic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Compositional discordance between prokaryotic plasmids and host chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Mobile genetic elements: the agents of open source evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Mechanisms of, and barriers to, horizontal gene transfer between bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

A genetic selection for supercoiling mutants of Escherichia coli reveals proteins implicated in chromosome structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Bacterial chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Temperature-dependent conjugative transfer of R27: role of chromosome- and plasmid-encoded Hha and H-NS proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

LeuO protein delimits the transcriptionally active and repressive domains on the bacterial chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

DNA supercoiling - a global transcriptional regulator for enterobacterial growth?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Cooperative interactions between bacteriophage P2 integrase and its accessory factors IHF and Cox

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

A truncated H-NS-like protein from enteropathogenic Escherichia coli acts as an H-NS antagonist

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The role of H-NS in silencing F transfer gene expression during entry into stationary phase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

YdgT, the Hha paralogue in Escherichia coli, forms heteromeric complexes with H-NS and StpA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

A global role for Fis in the transcriptional control of metabolism and type III secretion in Salmonella enterica serovar Typhimurium.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

RovA is autoregulated and antagonizes H-NS-mediated silencing of invasin and rovA expression in Yersinia pseudotuberculosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The effect of host-encoded nucleoid proteins on transposition: H-NS influences targeting of both IS903 and Tn10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

IHF and HU: flexible architects of bent DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Structure of the histone-like protein H-NS and its role in regulation and genome superstructure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Visualizing the assembly and disassembly mechanisms of the MuB transposition targeting complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The virF promoter in Shigella: more than just a curved DNA stretch

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Growth phase-dependent regulation and stringent control of fis are conserved processes in enteric bacteria and involve a single promoter (fis P) in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The positive and negative regulation of Tn10 transposition by IHF is mediated by structurally asymmetric transposon arms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The small nucleoid-binding proteins H-NS, HU, and Fis affect hilA expression in Salmonella enterica serovar Typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Shigella flexneri 2a strain 2457T expresses three members of the H-NS-like protein family: characterization of the Sfh protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The gyr genes of Salmonella enterica serovar Typhimurium are repressed by the factor for inversion stimulation, Fis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Mechanism of transcriptional activation by FIS: role of core promoter structure and DNA topology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Three-way interactions among the Sfh, StpA and H-NS nucleoid-structuring proteins of Shigella flexneri 2a strain 2457T

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

R391: a conjugative integrating mosaic comprised of phage, plasmid, and transposon elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio cholerae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Xis protein binding to the left arm stimulates excision of conjugative transposon Tn916

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

A molecular mechanism for the repression of transcription by the H-NS protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Evidence for direct protein-protein interaction between members of the enterobacterial Hha/YmoA and H-NS families of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Requirement for the molecular adapter function of StpA at the Escherichia coli bgl promoter depends upon the level of truncated H-NS protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

H-NS and H-NS-like proteins in Gram-negative bacteria and their multiple role in the regulation of bacterial metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Genome organisation and chromatin structure in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The histone-like protein HU binds specifically to DNA recombination and repair intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The expression of the Escherichia coli fis gene is strongly dependent on the superhelical density of DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Nucleoid proteins stimulate stringently controlled bacterial promoters: a link between the cAMP-CRP and the (p)ppGpp regulons in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Domain organization and oligomerization among H-NS-like nucleoid-associated proteins in bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The putative Orf4 of broad-host-range conjugative plasmid R446 could Be related to the H-NS family of bacterial nucleoid-associated proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The StpA Protein Functions as a Molecular Adapter To Mediate Repression of the bgl Operon by Truncated H-NS in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Information analysis of Fis binding sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Variation in HU composition during growth of Escherichia coli: the heterodimer is required for long term survival

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Amelioration of bacterial genomes: rates of change and exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Coupling of Escherichia coli hns mRNA levels to DNA synthesis by autoregulation: implications for growth phase control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Serratia marcescens contains a heterodimeric HU protein like Escherichia coli and Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Autoregulatory expression of the Escherichia coli hns gene encoding a nucleoid protein: H-NS functions as a repressor of its own transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Function of IHF in lambda DNA packaging. I. Identification of the strong binding site for integration host factor and the locus for intrinsic bending in cosB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The HimA and HimD subunits of integration host factor can specifically bind to DNA as homodimers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Gene 5.5 protein of bacteriophage T7 inhibits the nucleoid protein H-NS of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The regulation of transcription initiation by integration host factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Mutations in HU and IHF affect bacteriophage T4 growth: HimD subunits of IHF appear to function as homodimers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Host protein requirements for in vitro site-specific DNA inversion.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Overproduction of Escherichia coli integration host factor, a protein with nonidentical subunits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Histonelike proteins of bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Control of directionality in lambda site specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Integration host factor is required for the DNA inversion that controls phase variation in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Fis binding to the recombinational enhancer of the Hin DNA inversion system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Tn10 transposition and circle formation in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Bent DNA is needed for recombinational enhancer activity in the site-specific recombination system Cin of bacteriophage P1. The role of FIS protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

TF1, a bacteriophage-specific DNA-binding and DNA-bending protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

ymoA, a Yersinia enterocolitica chromosomal gene modulating the expression of virulence functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Multiple effects of Fis on integration and the control of lysogeny in phage lambda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

HU and integration host factor function as auxiliary proteins in cleavage of phage lambda cohesive ends by terminase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Molecular analysis of the Escherichia coli has gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The role of FIS in trans activation of stable RNA operons of E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Histone-like proteins are required for cell growth and constraint of supercoils in DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

The DNA-binding protein HBsu is essential for normal growth and development in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Fis plays a role in Tn5 and IS50 transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6606824

23 February 2021

Identifiers

10.1016/J.CSBJ.2019.06.010

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31303979%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

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