(Q33332041)

25 July 2017

title

Inferring the role of transcription factors in regulatory networks (English)

1 reference

25 July 2017

4

Ovidiu Radulescu

1 reference

25 July 2017

Carito Guziolowski

2

0 references

Anne Siegel

series ordinal

5

object named as

Anne Siegel

1 reference

25 July 2017

Philippe Veber

1

1 reference

25 July 2017

Michel Le Borgne

series ordinal

3

1 reference

25 July 2017

publication date

6 May 2008

1 reference

25 July 2017

1 reference

25 July 2017

volume

9

1 reference

25 July 2017

page(s)

228

1 reference

Creative Commons Attribution 2.0 Generic

25 July 2017

copyright license

start time

6 May 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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1 reference

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14 July 2018

1 reference

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Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks.

14 July 2018

1 reference

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An improved map of conserved regulatory sites for Saccharomyces cerevisiae

14 July 2018

1 reference

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14 July 2018

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14 July 2018

1 reference

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14 July 2018

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14 July 2018

1 reference

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A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth

14 July 2018

1 reference

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14 July 2018

1 reference

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Validation and refinement of gene-regulatory pathways on a network of physical interactions

14 July 2018

1 reference

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Inferring genetic regulatory logic from expression data

14 July 2018

1 reference

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Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks

14 July 2018

1 reference

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Transcriptional regulatory code of a eukaryotic genome

14 July 2018

1 reference

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A signaling mucin at the head of the Cdc42- and MAPK-dependent filamentous growth pathway in yeast

14 July 2018

1 reference

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Exploration of essential gene functions via titratable promoter alleles

14 July 2018

1 reference

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A systems approach to discovering signaling and regulatory pathways--or, how to digest large interaction networks into relevant pieces.

14 July 2018

1 reference

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Human protein reference database as a discovery resource for proteomics

14 July 2018

1 reference

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IntAct: an open source molecular interaction database

14 July 2018

1 reference

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The KEGG resource for deciphering the genome

14 July 2018

1 reference

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Random Boolean network models and the yeast transcriptional network

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Cytoscape: a software environment for integrated models of biomolecular interaction networks

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Regulatory network of Escherichia coli: consistency between literature knowledge and microarray profiles.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Transcriptional regulatory networks in Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

MINT: a Molecular INTeraction database

14 July 2018

1 reference

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Modeling and simulation of genetic regulatory systems: a literature review

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Using Bayesian networks to analyze expression data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Genomic expression programs in the response of yeast cells to environmental changes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Functional discovery via a compendium of expression profiles

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

The transcriptional program of sporulation in budding yeast

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Transcriptome profiling of Saccharomyces cerevisiae during a transition from fermentative to glycerol-based respiratory growth reveals extensive metabolic and structural remodeling

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

A causal inference approach for constructing transcriptional regulatory networks

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

31 October 2018

Physical network models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2422845

Topological and causal structure of the yeast transcriptional regulatory network

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18460200

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-9-228

1 reference

journals/bmcbi/VeberGBRS08

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

25 July 2017

1 reference