🎄Visualization and annotation of phylogenetic trees
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Oct 30, 2024 - R
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phylogenetic-trees
Here are 183 public repositories matching this topic...
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
visualization python bioinformatics dataviz genomics data-visualization phylogenetic-trees matplotlib radar-chart microbial-genomics circos comparative-genomics chord-diagram genomics-visualization
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Sep 26, 2024 - Python
python Circos
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Jun 14, 2024 - Python
Interactive viewer of phylogenetic trees
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Apr 4, 2024 - JavaScript
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
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Nov 19, 2024 - Python
Comparative Genomics Toolkit 3
python data-science bioinformatics statistics genomics biology evolution signal-processing parallel markov-chain phylogenetic-trees biopython phylogenetics molecular-evolution maximum-likelihood sequence-alignment non-stationary biological-sequence-analysis pycogent
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Dec 12, 2024 - Python
🌱 Base Classes and Functions for Phylogenetic Tree Input and Output
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Oct 30, 2024 - R
High-quality circular representations of taxonomic and phylogenetic trees
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Aug 7, 2024 - Python
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
bioinformatics genomics phylogenetic-trees phylogenetics epidemiology network-visualization hiv cdc phylogenomics phylogeny sequence-alignment genomic-data-analysis genomics-visualization pathogens
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Dec 9, 2024 - TypeScript
A tool for the spatial analysis of diversity
phylogenetic-trees spatial-analysis phylogeography phylogenetic-diversity phylodiversity endemism beta-diversity species-turnover randomisations hacktoberfest biodiverse
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Nov 25, 2024 - Perl
REVOLVER - Repeated Evolution in Cancer
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Dec 25, 2022 - R
A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)
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Sep 5, 2019 - Python
A library for working with phylogenetic and population genetic data.
c-plus-plus phylogenetic-trees phylogenetics population-genetics evolutionary-placement phylogenetic-data placement pool-sequencing phylogenetic-placements
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Dec 12, 2024 - C++
Phylogenetic tree viewer based on D3.js
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Aug 16, 2024 - JavaScript
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
bash r pipeline genomics perl phylogenetic-trees phylogenetics markers orthologues microbiology population-genetics codon-alignment maximum-likelihood phylogenomics species-trees recombination core-genome species-delimitation phylogenomics-pipeline clock-hypothesis
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Aug 7, 2024 - Perl
Using ggtree to build phylogenetic trees
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Nov 6, 2024 - HTML
Simple phylogenetic tree visualization python package for phylogenetic analysis
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Sep 14, 2024 - Python
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
visualization javascript analysis evolution phylogenetic-trees phylogenetics archaeopteryx archaeopteryx-js
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Jun 25, 2024 - JavaScript
forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research
visualization ruby java genomics biology evolution computational-biology phylogenetic-trees phylogenetics
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Aug 22, 2024 - Java
Python API for the Interactive Tree of Life (iTOL)
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Dec 12, 2024 - Python
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