Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
-
Updated
Dec 13, 2024 - R
#
derfinder
Here are 16 public repositories matching this topic...
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
count gene r human rstats bioconductor rnaseq deseq2 illumina exon junction derfinder annotation-agnostic recount
-
Updated
Dec 12, 2024 - R
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
-
Updated
Dec 12, 2024 - R
BioC2020 workshop: Human RNA-seq data from recount2 and related packages
-
Updated
Dec 10, 2024 - HTML
Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/
count gene r human rstats bioconductor rnaseq deseq2 illumina exon junction derfinder annotation-agnostic recount
-
Updated
Dec 10, 2024 - TeX
Supplementary code for the paper: Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders
-
Updated
Sep 4, 2021 - R
Plotting functions for derfinder results
-
Updated
Dec 12, 2024 - R
Optimising the Definitions of Expressed Regions
-
Updated
Apr 23, 2021 - R
Build and access GenomicState objects for use with derfinder tools from sources like Gencode
-
Updated
Dec 12, 2024 - R
Example data used by the derfinder and derfinderData Bioconductor packages
-
Updated
Dec 12, 2024 - R
Improve this page
Add a description, image, and links to the derfinder topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the derfinder topic, visit your repo's landing page and select "manage topics."