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  • Ottawa, ON

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  1. OLCRedmineAutomator OLCRedmineAutomator Public

    ➿ Program to monitor the OLC Redmine instance for automated bioinformatics job requests

    Python 1

  2. AmpliconPipeline AmpliconPipeline Public

    🍗 Pipeline for processing OLC 16S MiSeq runs with QIIME 2

    Jupyter Notebook 2

  3. AutoInterOp AutoInterOp Public

    💾 A Python tool for automatically running Illumina InterOp software on MiSeq run output

    Python

  4. AutoROGAV2 AutoROGAV2 Public archive

    📒 Code to automatically produce OLC reports of genomic analysis

    Python

  5. olc_webportalv2 olc_webportalv2 Public

    ☁️ A web portal to provide a simple interface for bioinformatics analysis with support for multiple CFIA users.

    Python 1

  6. sipping_portal sipping_portal Public

    🍹 Local Django application for running GenesipprV2 against active MiSeq runs

    Python 1