comment out lxml.html.clean import

lxml-html-clean dependency since it currently breaks tests due to being migrated to a separate module. We're not currently using it, so omitting the import is fine. Should its functionality be needed again, the conda package "lxml-html-clean" will need to be installed. See: https://bugs.launchpad.net/lxml/+bug/1958539 psf/requests-html#558
broadinstitute · Aug 23, 2024 · bdfe3eb · bdfe3eb
1 parent 2eead7b
commit bdfe3eb
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diff --git a/test/unit/test_integration_kaiju.py b/test/unit/test_integration_kaiju.py
@@ -10,7 +10,7 @@
 import shutil
 import tempfile
 
-import lxml.html.clean
+#import lxml.html.clean
 import pytest
 from Bio import SeqIO
 

diff --git a/test/unit/test_integration_kraken2.py b/test/unit/test_integration_kraken2.py
@@ -5,7 +5,7 @@
 import os.path
 from os.path import join
 
-import lxml.html.clean
+#import lxml.html.clean
 import pytest
 
 import metagenomics